| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | DH1 | 102,731 | 0 | A | C | 23.2% | 674.6 / 58.6 | 317 | intergenic (‑183/+15) | trmL/lldD | tRNA (cytosine(34)‑2'‑O)‑methyltransferase TrmL/alpha‑hydroxy‑acid oxidizing enzyme |
| Reads supporting (aligned to +/- strand): ref base A (185/44); new base C (0/69); total (185/132) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.30e-38 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 324 total aligned reads displayed.
AAAATTGGTGAGCAGTGCGGCCTTTTCCCCTCACCCCGGCCCTCTCCCCGGAGGGGCGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCG‑AACGGT‑CCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTT > DH1/102581‑102881 | aacagtGGTGAGCAGTGCGGCCTTTTCCCCTCACCCCGGCCCTCTCCCCGGAGGGGCGAGGGAGAAAAAAAGCGGGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCG‑AACGGT‑CCCCGCTCCCTGAGGGAGAGGGTTAGGGTGa < 6:70338/146‑1 (MQ=255) aaTTGGTGAGCAGTGCGGCCTTTTCCCCTCACCCCGGCCCTCTCCCCGGAGGGGCGAGGGAGAAAAAAAGAGTGCGGTGTCTTTTCAGAGTGAGGGAGTACATACAGCGCCG‑AACGGT‑CCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAgg < 6:1128306/151‑1 (MQ=255) aaTTGGTGAGCAGTGCGGCCTTTTCCCCTCACCCCGGCCCTCTCCCCGGAGGGGCGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCG‑AACGGT‑CCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAgg < 3:823718/151‑1 (MQ=255) ggggAGCAGTGCGGCCTTTTCCCCTCACCCCGGCCCTCTCCCCGGAGGGGCGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCG‑AACGGT‑CCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAggggg < 7:289248/147‑1 (MQ=255) ggTGAGCAGTGCGGCCTTTTCCCCTCACCCCGGCCCTCTCCCCGGAGGGGCGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCG‑AACGGT‑CCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAggggg < 6:1334669/150‑1 (MQ=255) gCCTTTTCCCCTCACCCCGGCCCTCTCCCCGGAGGGGCGAGGGAGAAAAAAAGAGTGCGGTGTGGTTTCAGAGTGAGGGAGTACATACAGCGCCG‑CACGGT‑CCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCGGAAACGACTATg > 6:192254/1‑151 (MQ=255) ccTTTTCCCCTCACCCCGGCCCTCTCCCCGGAGGGGCGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCG‑AACGGT‑CCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCGCAAACGACTATGc > 2:1127944/1‑151 (MQ=255) ttttCCCCTCACCCCGGCCCTCTCCCCGGAGGGGCGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCG‑AACGGT‑CCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCGCAAACGACTATGCCg > 8:296672/1‑151 (MQ=255) tttCCCCTCACCCCGGCCCTCTCCCCGGAGGGGCGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCG‑AACGGT‑CCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCGCCAACGCCTATGCCGc > 7:1669087/1‑151 (MQ=255) ttgccccTCCCCCCGGCCCTCTCCCCGGCGGGGCGAGGGAGAAAAAACGCGGGCGGTGTCGTTTCAGAGTGCGGGAGTACATACAGCGCCC‑AAGGGT‑CCCCTCTCCCTGTGGGAGCGGGTTAGGGTGCGGGGGCGCAAACGACTATGcc < 4:1216839/146‑1 (MQ=255) ttCCCCTCACCCCGGCCCTCTCCCCGGAGGGGCGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCG‑AACGGT‑CCCCTCTCCCTGAGGGAGAGGGGTAGGGTGAGGGGGCGCAACCGCCTATGCCGcc > 1:1268774/1‑150 (MQ=255) cccccccACCCCGGCCCTCCCCCCGGCGGGGGGAGGTATAAAAAACGTGGGGGGGGGCGTTTCAGTGTGAGGGAGAACAACCCGCGCGG‑ACGGGG‑CCCTTCTCCCTGAGGGAGCGGGTTCGGGTGCGGGGGCGCAAACGACTATGCCGCAt < 4:382261/150‑1 (MQ=255) ccccgacccccGGCCCTCTCCGCGGCGGGGGGAGCCCTAAAAAACCCGGGCGGTGGCGTTCCCGAGGCCGGGCCTACATACCGCGCCC‑ACCGGC‑CCCGCCTCCGTGAGGCTGTGGGTTCGGGTGCGGGCGCGCAAACGACTATGCCGCAtt < 6:524180/144‑1 (MQ=255) ccTCACCCCGGCCCTCTCCCCGGAGGGGCGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCG‑AACGGT‑CCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCGCAAACGACTATGCCGCATTcc > 3:300175/1‑151 (MQ=255) cgccccccGGCCCGCCCCCGGGGGGGGGGCGGTATAAAAACCGGGGGGGGTGGCGTTCCACAGTGCGGCAGAACATACCGCGCCC‑ACCGGC‑CCCCTCCCCCTGCGGGAGTGGGTTTGGGTGCGGGGGCGCAAACGACTATGCCGCATTccc < 3:1007328/147‑1 (MQ=255) cccccccGGCCCTCTCCCCGGCGGGGCGTGGTAGAAAAAAAGTGTGCGGTGTCGTTTCAGCGTGAGGTAGTACATACAGCGCCG‑ACCGGT‑CCCCTCTCCCTGTGGTAGAGGGTTTGGGGGCGGGGGCGCAAACGACTATGCCGCATTCCCt < 4:878827/148‑1 (MQ=255) cACCCCGGCCCTCTCCCCGGAGGGGCGAGGGAGAAAAAAAGAGTGCCGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCG‑AACGGT‑CCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCGCAAACGCCTATGCCGCAGTCCCtt > 8:1114144/1‑151 (MQ=255) aCCCCGGCCCTCTCCCCGGAGGGGCGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCG‑AACGGT‑CCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCGCAAACGCCTATGCCGCATTCCCttt > 3:1076851/1‑151 (MQ=255) aCCCCGGCCCTCTCCCCGGAGGGGCGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCG‑AACGGT‑CCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCGCAAACGACTATGCCGCATTCCCttt > 3:1352420/1‑151 (MQ=255) ccccGGCCCTCTCCCCGGAGGGGCGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCG‑AACGGT‑CCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCGCAAACGACTATGCCGCATTCCCTTTc < 1:154122/151‑1 (MQ=255) ccccGGCCCTCTCCACGGAGGCGCGACGGATAAAAAAAGAGTGCGGTCTCGTTTCAGAGTGAGGGACTACATACAGCGCCG‑AACGGT‑CCCCTCTCCCTGAGTGAGCGCGTTACGGAGAGGCGGCGCAAACCACTATCCCGCAATCCCttt > 4:1066705/1‑150 (MQ=255) cccGGCCGTCCCCCGGGTGGGGCGTGGCATAAAAAACTTGGGGGGGGTGTTTTCTGTGTGCGGGTTTAAATACCGCGCC‑‑TACGGTCCCCCTCTCCCTGTGGTTGTGTGTTTGGGTGCGGGGGCGCAAACGACTATGCCGCATTCCCTTTCg < 2:1647774/151‑1 (MQ=255) cGGCCCTCTCCCCGGAGGGGCGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCG‑AACGGT‑CCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGcc > 2:1431060/1‑151 (MQ=255) cccTCTCCCGGGAGGGGCGAGGGATAAAAAAAGAGTGCGGTGGCGTTTCACAGTGTGGGAGAACATACAGCGCCG‑AACGGT‑CCCCTCTCCCTGAGGCAGTGGGTTTGGGTGCGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATg < 8:1541564/151‑1 (MQ=255) cccTCTCCCCGGAGGGGCGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCG‑AACGGT‑CCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATg > 5:1062260/1‑151 (MQ=255) cccTCTCCCCGGAGGGGCGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCG‑AACGGT‑CCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCGCAAACGACTATGCCGCAGTCCCTTTCGCCATg > 6:236021/1‑151 (MQ=255) cGGAGGGGCGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCG‑AACGGT‑CCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGt > 4:265526/1‑151 (MQ=255) cGGAGGGGCGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCG‑AACGGT‑CCCATCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCGCAAACGACTATGCCGCATTCCCTTTAGCCATGGGAGCCAGt > 5:792736/1‑151 (MQ=255) ggggcttggtataaaaaaaGCGGGGGGTGGCGTTTCAGTGTCCGGGAGTAAAAACAGCGCCG‑ACGGGC‑CCCCTCTCCCTGAGGGTTTGGGTTCGGGGGCGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCg < 1:883447/139‑1 (MQ=255) ggCGAGGGAGAAAAAAAGAGTGCGGTGGCGTTTCAGAGTGAGGGAGTACATACAGCGCCG‑AACGGT‑CCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCACAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCa < 4:980089/151‑1 (MQ=255) gAGGGATAAAAAACGAGGGGGGGGGGGTTTCAGTGGGTGGGAGTAAATCCCGCGCCG‑ACGGGC‑CCCCTCTCCCTGCGGGAGTGGGTTTGGGTGCGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGc < 7:1593021/151‑1 (MQ=255) gAGGGATAAAAAACGAGGGCGGGGGCTTTTAAGAGTGCGGGATTACATACCCCCCCC‑ACCGGG‑CCCCGCGCCCTGAGGTCGAGGGTTAGGGGCCGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGc < 5:1593731/151‑1 (MQ=255) gAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCG‑AACGGT‑CCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGc > 8:485060/1‑151 (MQ=255) agaAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCG‑AACGGT‑CCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAActc > 3:64333/1‑151 (MQ=255) aaaaaaaGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCG‑AACGGT‑CCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCtt > 6:912154/1‑151 (MQ=255) aaaGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCG‑AACGGT‑CCCCTCTCCCTGAGGGAGAGGGGTAGGGGGAGGGGGCGCAAACGACTATGCCGCATTCCCGTTCGCCATGGGAGCCAGTGCCGCAGGCGACTCTGTAcc > 8:1507204/1‑151 (MQ=255) acgtgtggggtgggGTTTCAGTGGGCGGGTGTCCATCCCGCGCCT‑ACGGGT‑CCCCGCGCCCGGTGGGTGTGGGTTTGGGTGTGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTAccc < 6:435368/147‑1 (MQ=255) tgtCGTTTCAGAGTGAGGGAGTACATACAGCGCCG‑AACGGT‑CCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGc > 7:1277417/1‑150 (MQ=255) ggtggTTGCAGTGTGAGGCCGTACATACCGCGCCG‑AAGGGC‑CCCCTCCCCCTGAGGTAGTGGTTTTGGGGGCGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCa < 1:452318/147‑1 (MQ=255) gtggTTTCAGTGTGAGGTATTACATACCGCGCCG‑AAGGGT‑CCCCTGTCCCTGAGGGAGTGGGTTAGGGTGAGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCAc < 4:202378/148‑1 (MQ=255) cGTTTCAGAGTGAGGGAGTACATACAGCGCCG‑AACGGT‑CCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCAcc > 2:939953/1‑150 (MQ=255) cGTTTCAGAGTGAGGGAGTACATACAGCGCCG‑AACGGT‑CCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCAcc > 2:1668593/1‑150 (MQ=255) gTTTCAGAGTGAGGGAGTACATACAGCGCCG‑AACGGT‑CCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCAcc > 3:431610/1‑149 (MQ=255) gTTTCAGAGTGAGGGAGTACATACAGCGCCG‑AACGGT‑CCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCAcc > 1:662188/1‑149 (MQ=255) ttCAGAGTGAGGGAGTACATACAGCGCCG‑AACGGT‑CCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGc < 1:115571/150‑1 (MQ=255) tgccgggTGAGGGTGAACATACCGCGCCC‑ACCGGC‑CCCCGCTCCGTGGGGGTGTGGTTTCGGGTCCGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGc < 2:277465/144‑1 (MQ=255) ccagcgggcgggAGAACAACCGGCGCCT‑ACGGGG‑CCCCCCGCCGTGGGGGCGGGGGTTGGGGGGCGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGa < 7:982627/142‑1 (MQ=255) ccgcgggcggccgtccatccaCCGCCG‑ACCGGC‑CCCCTCTCCCTGCGGGTGTGGGTTAGGGTGCGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGa < 8:1666974/135‑1 (MQ=255) cAGAGTGAGGGAGTACATACAGCGCCG‑AACGGT‑CCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGa > 3:1189205/1‑150 (MQ=255) cAGAGTGAGGGAGTACATACAGCGCCG‑AACGGT‑CCCCTCTCACTGAGGGAGAGGGTTAGGGTGAGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGa > 7:842841/1‑150 (MQ=255) gagTGAGGGAGTACATACAGCGCCG‑AACGGT‑CCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATc > 4:719208/1‑151 (MQ=255) gagTGAGGGAGTACATACAGCGCCG‑AACGGT‑CCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATc > 7:1328044/1‑151 (MQ=255) tGAGGGAGTACATACAGCGCCG‑AACGGT‑CCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTg > 5:281292/1‑151 (MQ=255) gtggtaGTACTTACAG‑GCCGTAACGGT‑CCCGTCAGCTTGTGGGAGTGGGTTTGGGTGCGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGc < 4:666617/146‑1 (MQ=255) gcgggctaacataccCCGCCC‑ACGGGT‑CCCCTCGCCCTGGGGGAGTGGTTTGGGGTGCGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGc < 8:550165/143‑1 (MQ=255) gAGGGATTACATACCGCGCCG‑ACGGGC‑CCCGTCTCCCTGCGGGAGAGGGTTAGGGTGCGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGc < 5:1517912/151‑1 (MQ=255) gTACATACAGCGCCT‑AACGGT‑CCCCTCTCCCTGAGTTAGTGGGTTAGGGTGAGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAAtt < 5:143692/151‑1 (MQ=255) cataccGCGCCG‑ACGGGG‑CCCCGCTCCCTGTGGGTGAGGGTTAGGGGGAGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCg < 6:1550207/151‑1 (MQ=255) cataccGCGCCG‑ACCGGG‑CCCCGCTCCCTGCGGGCGTGGGTTTGGGTGAGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCg < 4:1429125/151‑1 (MQ=255) atacaGCGCCG‑AACGGT‑CCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGc > 1:73633/1‑151 (MQ=255) tncaGCGCCG‑AACGGT‑CCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCt > 7:1354366/1‑151 (MQ=255) caGCGCCG‑AACGGT‑CCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCGCAAACGACTCTGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTg > 7:1538142/1‑150 (MQ=255) cgcCG‑AACGGT‑CCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCg < 3:77705/151‑1 (MQ=255) ccG‑AAGGGT‑CCCCTCTCCGTGTGGGAGAGGGTTTGGGTGCGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGAt < 4:1187769/151‑1 (MQ=255) ccG‑AACGGT‑CCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGAt > 5:524778/1‑151 (MQ=255) cacggggccccTCCCCGTGGGGGCGGGGTTTCGGGGGCGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGAttt < 4:464426/144‑1 (MQ=255) cGGG‑CCCGTCTCCCGGCGGGAGAGGGTTCGGGGGCGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTcgc < 5:974654/151‑1 (MQ=255) ggggccccGCTCCGTGCGGGAGAGGGTTGGGGGGCGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTcgc < 7:1542665/147‑1 (MQ=255) ggT‑CCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTcgcg > 4:496945/1‑151 (MQ=255) gT‑CCCCTCTACATGAGGGAGAGGGTTAGGGTGAGGCGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTAGCTGATCGATTTAgcgc > 6:1479570/1‑151 (MQ=255) t‑CCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGcc > 3:1626615/1‑151 (MQ=255) t‑CCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGcc > 7:1065704/1‑151 (MQ=255) t‑CCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGcc > 5:199751/1‑151 (MQ=255) cccTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCGCAAACGACTATGCCGCATTCACTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCTCGcc > 6:162985/1‑149 (MQ=255) cccTCCCCCTGCGGGCGCGGGTTCGGGTGCGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAg < 6:761486/151‑1 (MQ=255) ctctCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTc > 4:132090/1‑151 (MQ=255) tctcCCTGAGGGAGAGGGTTAGGGTGAGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTc > 5:593275/1‑150 (MQ=255) tcCCTGAGGGAGAGGGTTAGGGTGAGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGc > 1:339005/1‑151 (MQ=255) gcccTGAGGGAGTGGGTTCGGGGGCGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGc < 1:1042381/150‑1 (MQ=255) ccTGAGGGAGAGGGTTAGGGTGAGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGt > 5:1166484/1‑151 (MQ=255) cTGAGGGAGAGGGTTAGGGTGAGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTc > 7:373139/1‑151 (MQ=255) gAGGGAGAGGTTTAGGGTGCGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCa < 5:850805/150‑1 (MQ=255) gAGGGAGAGGGTTAGGGTGAGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCAt > 6:1224968/1‑151 (MQ=255) aGGGAGAGGGTTAGGGTGAGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTAAGCGTCATc > 1:751585/1‑151 (MQ=255) gtgtgggTTGGGGTGGGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGcc < 2:1396935/147‑1 (MQ=255) gagtGGTTTTGGGGGTGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGcc < 4:1507553/151‑1 (MQ=255) gagGGTTAGGGTGAGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCAc > 1:1177337/1‑151 (MQ=255) gagGGTTAGGGTGAGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCAc > 7:647566/1‑151 (MQ=255) gagGGTTAGGGTGAGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCAc > 8:1350651/1‑151 (MQ=255) ggggTTCGGGGGAGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACt < 4:1244254/150‑1 (MQ=255) gggTTAGGGTGAGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACtt > 8:761267/1‑151 (MQ=255) ggTTCGGGGGAGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACttt < 3:1477925/151‑1 (MQ=255) ttAGGGTGAGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTc > 8:1199169/1‑150 (MQ=255) tAGGGTGGGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCa < 1:1432140/150‑1 (MQ=255) ggTGAGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCAtctc > 5:1328476/1‑151 (MQ=255) ggTGAGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCAtctc > 3:1456775/1‑151 (MQ=255) gTGAGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATctct > 2:1475635/1‑151 (MQ=255) tGAGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCtt > 1:1658420/1‑151 (MQ=255) gAGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCttt > 8:223150/1‑151 (MQ=255) aGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCtttt > 2:616465/1‑151 (MQ=255) | AAAATTGGTGAGCAGTGCGGCCTTTTCCCCTCACCCCGGCCCTCTCCCCGGAGGGGCGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCG‑AACGGT‑CCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTT > DH1/102581‑102881 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |