| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | DH1 | 3,701,765 | Δ1 bp | coding (2129/2244 nt) | fhuA ← | ferrichrome‑iron receptor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | DH1 | 3,701,765 | 0 | G | . | 99.5% | 2017.8 / 2.6 | 434 | coding (2129/2244 nt) | fhuA | ferrichrome‑iron receptor |
| Reads supporting (aligned to +/- strand): ref base G (0/1); major base . (221/210); minor base C (0/2); total (221/213) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.39e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.81e-01 | |||||||||||
Only 100 of 434 total aligned reads displayed.
GGCACGGAAATCCGTGCCCCAAAAGAGAAATTAGAAACGGAAGGTTGCGGTTGCAACGACCTGACGTTCTGCGCCCCAGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGCGCCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTACTAACGCATCCACGACCGTATAACTTCCCACTTTAAAGGAGTTAGCCGGATCACCATAACTGGAGCCAGTATAACGACCACCGGTGCCCAGCGTCAGACC > DH1/3701620‑3701910 | cACGGAAATCCGTGCCCCAAAAGAGAAATTAGAAACGGAAGGTTGCGGTTGCAACGACCTGACGTTCTGCGCCCCAGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTg > 3:1238453/1‑151 (MQ=255) aaaTCCGTGCCCCAAAAGAGAAATTAGAAACGGAAGGTTGCGGTTGCAACGACCTGACGTTCTGCGCCCCAGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGagcc < 1:802853/151‑1 (MQ=255) atacGTGCCCCAAAAGAGAAATTAGAAAAGGAAGGTTGCGGTTGCAACGACCTGACGTTCTGCGCCACAGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGCTTGTTAACATGCAGC‑CCACGTTGGagcc > 1:252105/4‑149 (MQ=255) aTCCGTGCCCCAAAAGAGAAATTAGAAAGGGAAGGTTGCGGTTGCAACGACCTGACGTTCTGCGCCCCAGAAGGAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCAGGATCGAACAGGTTGTTAACATGCAGC‑CCAGGTTGGagcg > 4:248269/1‑148 (MQ=255) ccGTGCCCCAAAAGAGAAATTAGAAACGGAAGGTTGCGGTTGCAACGACCTGACGTTCTGCGCCCCAGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGagccagc < 6:1783676/150‑1 (MQ=255) gTGCCCCAAAAGAGAAATTAGAAACGGAAGGTTGCGGTTGCAACGACCTGACGTTCTGCGCCCCAGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCAt < 6:1465597/151‑1 (MQ=255) tGCCCCAAAAGAGAAATTAGAAACGGAAGGTTGCGGTTGCAACGACCTGACGTTCTGCGCCCCAGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATg > 2:929821/1‑151 (MQ=255) gCCCCAAAAGAGAAATTAGAAACGGAAGGTTGCGGTTGCAACGACCTGACGTTCTGCGCCCCAGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGc > 3:1326424/1‑151 (MQ=255) ccccAAAAGAGAAATTAGAAACGGAAGGTTGCGGTTGCAACGACCTGACGTTCTGCGCCCCAGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGcc > 8:1244583/1‑151 (MQ=255) cccAAAAGAGAAATTAGAAACGGAAGGTTGCGGTTGCAACGACCTGACGTTCTGCGCCCCAGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCg < 8:295204/151‑1 (MQ=255) cAAAAGAGAAATTAGAAACGGAAGGTTGCGGTTGCAACGACCTGACGTTCTGCGCCCCAGACGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGAc < 2:818699/151‑1 (MQ=255) aaaaGAGAAATTAGAAACGGAAGGTTGCGGTTGCAACGACCTGACGTTCTGCGCCCCAGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACt > 5:1084016/1‑151 (MQ=255) aaaaGAGAAATTAGAAACGGAAGGTTGCGGGTGCAACGACCTGACGGTCTGCGCCCCCGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACt < 8:614314/151‑1 (MQ=255) aaaGAGAAATTAGAAACGGAAGGTTGCGGTTGCAACGACCTGACGTTCTGCGCCCCAGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTc > 1:1384935/1‑151 (MQ=255) aaGAGAAATTAGAAACGGAAGGTTGCGGTTGCAACGACCTGACGTTCTGCGCCCCAGAAGCAGCCATAAGTGTTTAAGCAGCTGGCGCCGTATTCACGATCGCACAGGGTGTTACCATGCAGC‑CCACGTTGGCGCCCGCCATGCCGCCTcg > 2:651386/1‑151 (MQ=255) aaGAGAAATTAGAAACGGAAGGTTGCGGTTGCAACGACCTGACGTTCTGCGCCCCAGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGCCTcg > 7:133305/1‑151 (MQ=255) aaGAGAAATTAGAAACGGAAGGTTGCGGTTGCAACGACCTGACGTTCTGCGCCCCAGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTcg > 4:1314948/1‑151 (MQ=255) agagAAATTAGAAAGGGAAGGTTGCGGTTGCAACGACCTGACGTTCTGCGCCCCAGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTcgc < 8:495719/151‑1 (MQ=255) agagAAATTAGAAACGGAAGGTTGCGGTTGCAACGACCTGACGTTCTGCGCCCCAGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTcgc > 2:1171790/1‑151 (MQ=255) agagAAATTAGAAACGGAAGGTTGCGGTTGCAACGACCTGACGTTCTGCGCCCCAGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTcgc > 5:1502445/1‑151 (MQ=255) gagaAATTAGAAACGGAAGGTTGCGGTTGCAACGACCTGACGTTCTGCGCCCCAGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTcgcg < 5:1371599/151‑1 (MQ=255) agaAATTAGAAACGGAAGGTTGCGGTTGCAACGACCTGACGTTCTGCGCCCCAGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCgcgc > 8:1638327/1‑151 (MQ=255) gaAATTAGAAACGGAAGGTTGCGGTTGCAACGACCTGACGTTCTGCGCCCCAGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGcc < 5:1210521/151‑1 (MQ=255) aaTTAGAAACGGAAGGTTGCGGTTGCAACGACCTGACGTTCTGCGCCCCAGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGcc > 7:1668765/1‑149 (MQ=255) aTTAGAAACGGAAGGTTGCGGTTGCAACGACCTGACGTTCTGCGCCCCAGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGcc > 6:1087840/1‑148 (MQ=255) aTTAGAAACGGAAGGTTGCGGGTGCAACGACCTGACGTTCTGCGCCCCAGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGa < 2:1266381/151‑1 (MQ=255) tAGAAACGGAAGGTTGCGGTTGCAACGACCTGACGTTCTGCGCCCCAGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAAGAGGTTGTTAACATGCAGC‑CCAAGATGGAGCCAGCCATGCCGACTCGAGCCACATc > 8:1078951/1‑151 (MQ=255) tAGAAACGGAAGGTTGCGGTTGCAACGACCTGACGTTCTGCGCCCCAGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGAt < 5:1004778/150‑1 (MQ=255) aGAAACGGAAGGTTGCGGTTGCAACGACCTGACGTTCTGCGCCCCAGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGCTc > 7:29375/1‑150 (MQ=255) aGAAACGGAAGGTTGCGGTTGCAACGACCTGACGTTCTGCGCCCCAGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATc > 5:155659/1‑150 (MQ=255) gAAACGGAAGGTTGCGGTTGCAACGACCTGACGTTCTGCGCCCCAGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCAt < 7:1841358/151‑1 (MQ=255) caaaCGGAAGGTTGCGGTTGCAACGACCTGACGTTCTGCGCCCCAGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCAt < 2:1792202/150‑1 (MQ=255) aaaCGGAAGGTTGCGGTTGCAACGACCTGACGTTCTGCGCCCCAGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCAt > 6:967492/1‑150 (MQ=255) aCGGAAGGTTGCGGTTGCAACGACCTGACGTTCTGCGCCCCAGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAAc < 7:1439227/151‑1 (MQ=255) cGGAAGGTTGCGGTTGCAACGACCTGACGTTCTGCGCCCCAGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACg > 5:591730/1‑151 (MQ=255) ggAAGGTTGCGGTTGCAACGACCTGACGTTCTGCGCCCCAGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGCCTCGCGCCAGATCATAACgg > 2:528135/1‑150 (MQ=255) ggAAGGTTGCGGTTGCAACGACCTGACGTTCTGCGCCCCAGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGt > 2:1059510/1‑151 (MQ=255) ggAAGGTTGCGGTTGCAACGACCTGACGTTCTGCGCCCCAGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGt < 1:958648/151‑1 (MQ=255) gacggttgcggttgcAACGACCTGACGTTCTGCGCCCCCGAAGAAGCCATAAGTGTTACAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTa < 4:636602/148‑1 (MQ=255) gAAGGTTGCGGTTGCAACGACCTGACGTTCTGCGCCCCAGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTa < 4:1665909/151‑1 (MQ=255) ggttgcggttgcAACGACCTGACGTTCTGCGCCCCAGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTACTa < 3:332812/151‑1 (MQ=255) gttgcggttgcAACGACCTGACGTTCTGCGCCCCAGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTACTaa < 4:1468772/151‑1 (MQ=255) tgcggttgcAACGACCTGACGTTCTGCGCCCCAGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTACTAAc < 1:1063346/150‑1 (MQ=255) gcggttgcAACGACCTGACGTTCTGCGCCCCAGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTACTAACg < 2:252994/150‑1 (MQ=255) gcAACGACCTGACGTTCTGCGCCCCAGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTACTAACGCATCCAc < 7:471420/151‑1 (MQ=255) cGACCTGACGTTCTGCGCCCCAGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTACTAACGCATCCACGAcc > 4:1168604/1‑151 (MQ=255) gACCTGACGTTCTGCGCCCCAGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTACTAACGCATCCACGACCg < 5:430286/151‑1 (MQ=255) gACCTGACGTTCTGCGCCCCAGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTACTAACGCATCCACGACCg > 3:18035/1‑151 (MQ=255) cTGACGTTCTGCGCCCCAGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTACTAACGCATCCACGACCGtat > 4:538834/1‑151 (MQ=255) gACGTTCTGCGCCCCAGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTACTAACGCATCCACGACCGtat < 4:1777749/149‑1 (MQ=255) gACGTTCTGCGCCCCACACGCAGCAATAAGTGTTAACGCAGGTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCCGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTACTAACGCATCCACGACCGtat < 8:780839/149‑1 (MQ=255) gTTCTGCGCCCCAGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTACTAACGCATCCACGACCGTATAACtt > 6:214075/1‑151 (MQ=255) gTTCTGCGCCCCAGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTACTAAAGCATCCACGACCGTATAACtt > 2:478171/1‑151 (MQ=255) atGCGCCCCAGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTACTAACGCATCCACGACCGTATAACTTccc < 1:1689034/150‑1 (MQ=255) cgcCCCAGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTACTAACGCATCCACGACCGTATAACTTCCCACt > 6:301876/1‑151 (MQ=255) gcCCCAGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGTTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCAATGCCGACTCGCCACAGATCATAACGTACTAACGCATCCACGACCGAATAAATACCCACtt > 8:1761054/1‑151 (MQ=255) gcCCCAGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGCCTCGCGCCAGATCATAACGTACTAACGCATCCACGACCGTATAACTTCCCACtt > 3:1544417/1‑151 (MQ=255) ccAGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTACTAACGCATCCACGACCGTATAACTTCCCACTTTaa < 7:1775240/151‑1 (MQ=255) cAGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTACTAACGCATCCACGACCGTATAACTTCCCACTTTaaa < 3:401968/151‑1 (MQ=255) cAGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTACTAACGCATCCACGACCGTATAACTTCCCACTTTaa > 6:517465/1‑150 (MQ=255) aGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTACTAACGCATCCACGACCGTATAACTTCCCACTTTAAAg < 4:461345/151‑1 (MQ=255) ccagcCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTACTAACGCATCCACGACCGTATAACTTCCCACTTTAAAGGAGt < 6:1342224/150‑1 (MQ=255) cagcCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTACTAACGCATCCACGACCGTATAACTTCCCACTTTAAAGGAGtt < 7:1245486/151‑1 (MQ=255) agcCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTACTAACGCATCCACGACCGTATAACTTCCCACTTTAAAGGAGtt > 3:1493007/1‑150 (MQ=255) ccATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTACTAACGCATCCACGACCGTATAACTTCCCACTTTAAAGGAGTTAGc > 1:694630/1‑151 (MQ=255) cATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACGGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTACTAACGCATCCACGACCGTATAACTTCCCACTTTAAAGGAGTTAGcc > 5:785344/1‑151 (MQ=255) cATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTACTAACGCATCCACGACCGTATAACTTCCCACTTTAAAGGAGTTAGcc > 1:54061/1‑151 (MQ=255) cATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTACTAACGCATCCACGACCGTATAACTTCCCACTTTAAAGGAGTTAGcc > 4:1083843/1‑151 (MQ=255) attgtTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTACTAACGCATCCACGCCCGTATAACTTCCCACTTTAAAGGAGTTAGCCGGAt > 7:61011/3‑151 (MQ=255) aGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTACTAACGCATCCACGACCGTATAACTTCCCACTTTAAAGGAGTTAGCCGGAt < 5:244417/151‑1 (MQ=255) tgtTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTACTAACGCATCCACGACCGTATAACTTCCCACTTTAAAGGAGTTAGCCGAATc > 3:1286042/1‑150 (MQ=255) gtTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTACTAACGCATCCACGACCGTATAACTTCCCACTTTAAAGGAGTTAGCCGGATCAc > 3:592498/1‑151 (MQ=255) ttAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTACTAACGCATCCACGACCGTATAACTTCCCACTTTAAAGGAGTTAGCCGGATCAcc > 1:1523791/1‑151 (MQ=255) agccgcTGGCGACGTATTCAGGATGCAACAGGTTGTTAACATGCAGC‑CCACGTTGGCGCCCGACTTGCCGAATCGCGCCAGATCATAACGTACTAACGCACCCACGACCGTATAACTTCCCACTTTAAAGGAGTTAGCCGGATCACCATaa < 1:845592/151‑1 (MQ=255) gcagcTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTACTAACGCATCCACGACCGTATAACTTCCCACTTTAAAGGAGTTAGCCGGATCACCATAAc < 5:898149/151‑1 (MQ=255) cagcTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CAAAGTTTTAGCAAGCCATGCCGACTCGATCCAGATCATAAAGTACTAAATCATCCAAGAACGTATAACTTCAAACTTTAAATGAGATATCCGGATCACCATAACt > 3:1042708/1‑151 (MQ=255) agcTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTACTAACGCATCCACGACCGTATAACTTCCCACTTTAAAGGAGTTAGCCGGATCACCATAACTg > 3:852770/1‑151 (MQ=255) agcTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTACTAACGCATCCACGACCGTATAACTTCCCACTTTAAAGGAGTTAGCCGGATCACCATAACTg < 4:1544841/151‑1 (MQ=255) ggCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCAAGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTACTAACGCATCCACGACCGTATAACTTCCCACTTTAAAGGAGTTAGCCGGATCACCATAACTGGAGc > 7:1394524/1‑151 (MQ=255) gCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTACTAACGCATCCACGACCGTATAACTTCCCACTGTAAAGGAGTTAGCCGGATCACCATAACTGGAGcc > 3:758102/1‑151 (MQ=255) aCGTATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTACTAACGCATCCACGACCGTATAACTTCCCACTTTAAAGGAGTTAGCCGGATCACCATAACTGGAGCCAGt < 8:1347160/151‑1 (MQ=255) aCGTATTCAAGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCTCGCCAGATCATAACGTAATAACGCATCCACGACAGTATAAATTCCCTATTTAAAGGAGTTAGCCGGATAACCATAACTGGAGCCact > 1:59750/1‑149 (MQ=255) tATTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTACTAACGCATCCACGACCGTATAACTTCCCACTTTAAAGGAGTTAGCCGGATCACCATAACTGGAGCCAGtat > 4:794560/1‑150 (MQ=255) aTTCACGATCTAACATGTTGTTAACATGCAGC‑CCACGTTGGACCCAGCCATGCCGACCCGCGCCAGATCATCACGTACTAACGCATCCACGACCGTATAACTTCCCACTTTAAAGGAGTTAGCCGGATCACCATAACTGGAGCCAGTATaa < 3:1701337/151‑1 (MQ=255) aTTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTACTAACGCATCCACGACCGTATAACTTCCCACTTTAAAGGAGTTAGCCGGATCACCATAACTGGAGCCAGtata > 7:93017/1‑150 (MQ=255) aTTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTACTAACGCATCCACGACCGTATAACTTCCCACTTTAAAGGAGTTAGCCGGATCACCATAACTGGAGCCAGTATaa < 6:864745/151‑1 (MQ=255) aTTCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTACTAACGCATCCACGACCGTATAACTTCCCACTTTAAAGGAGTTAGCCGGATCACCATAACTGGAGCCAGTATaa < 1:410324/151‑1 (MQ=255) tCACGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTACTAACGCATCCACGACCGTATAACTTCCCACTTTAAAGGAGTTAGCCGGATCACCATAACTGGAGCCAGTATAACg > 6:1407202/1‑151 (MQ=255) cGATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTACTAACGCATCCACGACCGTATAACTTCCCACTTTAAAGGAGTTAGCCGGATCACCATAACTGGAGCCAGTATAACGacc > 1:1228833/1‑151 (MQ=255) gATCGAACAGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTACTAACGCATCCACGACCGTATAACTTCCCACTTTAAAGGAGTTAGCCGGATCACCATAACTGGAGCCAGTATAACGacc > 2:1422407/1‑150 (MQ=255) caaCAGGTTGTTAACATGCAGC‑CCTCGTTGGAGCCAGCCATGCCGACGCGCGCCACTTCATAACGTACTAACGCATCCACGACCGTATAACTTCCCACTTTAAAGGAGTTAGCCGGATCACCATAACTGGAGCCAGTATAACGACCACCgg < 7:1075523/150‑1 (MQ=255) aGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTACTAACGCATCCACGACCGTATAACTTCCCACTTTAAAGGAGTTAGCCGGATCACCATAACTGGAGCCAGTATAACGACCACCGGTGcc > 5:5158/1‑151 (MQ=255) aGGTTGTTAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTACTAACGCATCCACGACCGTATAACTTCCCACTTTAAAGGAGTTAGCCGGATCACCATAACTGGAGCCAGTATAACGACCACCGGTGcc > 7:1049368/1‑151 (MQ=255) gttgttAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTACTAACGCATCCACGACCGTATAACTTCCCACTTTAAAGGAGTTAGCCGGATCACCATAACTGGAGCCAGTATAACGACCACCGGTGccc > 5:1760039/1‑150 (MQ=255) gttgttAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTACTAACGCATCCACGACCGTATAACTTCCCACTTTAAAGGAGTTAGCCGGATCACCATAACTGGAGCCAGTATAACGACCACCGGTGCCCa < 1:1169429/151‑1 (MQ=255) tgttAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTACTAACGCATCCACGACCGTATAACTTCCCACTTTAAAGGAGTTAGCCGGATCACCATAACTGGAGCCAGTATAACGACCACCGGTGCCCAg < 1:736258/150‑1 (MQ=255) tgttAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTACTAACGCATCCACGACCGTATAACTTCCCACTTTAAAGGAGTTAGCCGGATCACCATAACTGGAGCCAGTATAACGACCACCGGTGCCCAg < 1:1618356/150‑1 (MQ=255) gttAACATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTACTAACGCATCCACGACCGTATAACTTCCCACTTTAAAGGAGTTAGCCGGATCACCATAACTGGAGCCAGTATAACGACCACCGGTGCCCAGc < 8:1475457/150‑1 (MQ=255) aaCATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTACTAACGCATCCACGACCGTATAACTTCCCACTTTAAAGGAGTTAGCCGGATCACCATAACTGGAGCCAGTATAACGACCACCGGTGCCCAGCGTCa < 2:1609277/151‑1 (MQ=255) cATGCAGC‑CCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTACTAACGCATCCACGACCGTATAACTTCCCACTTTAAAGGAGTTAGCCGGATCACCATAACTGGAGCCAGTATAACGACCACCGGTGCCCAGCGTCAGa < 2:1019091/151‑1 (MQ=255) | GGCACGGAAATCCGTGCCCCAAAAGAGAAATTAGAAACGGAAGGTTGCGGTTGCAACGACCTGACGTTCTGCGCCCCAGAAGCAGCCATAAGTGTTAAAGCAGCTGGCGACGTATTCACGATCGAACAGGTTGTTAACATGCAGCGCCACGTTGGAGCCAGCCATGCCGACTCGCGCCAGATCATAACGTACTAACGCATCCACGACCGTATAACTTCCCACTTTAAAGGAGTTAGCCGGATCACCATAACTGGAGCCAGTATAACGACCACCGGTGCCCAGCGTCAGACC > DH1/3701620‑3701910 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |