| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | DH1 | 936,169 | 0 | T | . | 35.8% | 220.9 / 126.6 | 97 | intergenic (‑13/+21) | ECDH1_RS04615/ECDH1_RS04620 | tRNA‑Met/tRNA‑Met |
| Reads supporting (aligned to +/- strand): ref base T (4/57); new base . (2/32); total (7/90) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.45e-01 | |||||||||||
Only 100 of 125 total aligned reads displayed.
GAATGGCGCTTTTTTATGGGAGACCAGAAACAAA‑AAAACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTACTTCATCAAATTTTAATTGGTTGCGGGG > DH1/936019‑936310 | gAATGGCGCTTTTTTATGGGAGACCAGAAACAAA‑AAAACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑t < 1:636948/151‑1 (MQ=255) acagggtcgtttttAAGGGAGACCAGCACAAAC‑TACACCGCCGTTTGCGTGTTCAATCATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑tt < 5:675999/142‑1 (MQ=14) aaTGGTGCTTTTTTATGGGAGACCAGAAACAAA‑TACTCACGCGTTAGGTTGTTCATTTATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑tt < 4:356688/151‑1 (MQ=17) aaTGGCGCTTTTTTATGGGAGACCAGAAACAAA‑AAAACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑tt < 3:1804848/151‑1 (MQ=255) aaTGGCGCTTTTTTATGGGAGACCAGAAACAAA‑AAAACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑tt < 3:794299/151‑1 (MQ=255) aaTGGCGCTTTATTATGGGAGACGAGAAACAAA‑ATAACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑tt < 6:558753/151‑1 (MQ=255) aTGGCGCTTTTTTATGGGAGACCAGAAACAAA‑AAAACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑ttt < 6:543066/151‑1 (MQ=255) aTGGCGCTTTTTTATGGGAGACCAGAAACAAA‑AAAACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑ttt < 2:1035017/151‑1 (MQ=255) aTGGCGCTTTTTTATGGGAGACCAGAAACAAA‑AAAACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGGTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑ttt < 1:73350/151‑1 (MQ=255) ggCGCTTTTTTATGGGAGACCAGAAACAAA‑AAAACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑tttt < 4:1799269/150‑1 (MQ=255) ggCGCTTTTTTATGGGAGACCAGAAACAAA‑AAAACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑tttt < 2:930048/150‑1 (MQ=255) ggCGCTTTTTTATGGGAGACCAGAAACAAA‑AAAACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTTa < 3:514693/151‑1 (MQ=255) ggCGCTTTTTTATGGGAGACCAGAAACAAA‑AAAACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTTa < 6:73413/151‑1 (MQ=255) ggCGCTTTTTTATGGGAGACCAGAAAAAAT‑AAAACACGCGTTAGGTTGTTAAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑tttac < 2:601879/151‑3 (MQ=18) gctgcTTTTTTATGGGAGACCAGAAACAAA‑AACACACCCTATAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑ttta < 1:1699454/147‑2 (MQ=255) gcgcTGTTTTATGGGAGACCAGAAACAAA‑AAAACACCCGTTAGGGTGTTCAATAATTGGTTGAGGGGGCCGGATTTGAACAGACGACCTTCGGGTTATTAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTTa < 3:1270977/150‑1 (MQ=255) cggcgtttgtAGGGGAGACCAGCAACACA‑AACACACCCGAGAGGGTGTTCAATCATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑tttact < 3:1183582/146‑4 (MQ=14) ccgcgTTTTTAGGGGAGCCCAGATCCAAC‑AAAACACCCGTCAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑tttact < 7:53312/150‑4 (MQ=17) cgcTTTTTTATGGGAGACCAGAACCAAA‑AAAACACCCGTTAGGGTGTTCAATAATTGGGTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTTACt < 6:1298928/151‑1 (MQ=255) cgcTTTTTTATGGGAGACCAGAAACAAA‑AAAACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTTACt < 4:145766/151‑1 (MQ=255) cgcTATTTTATGGGACACCAGAAACAAA‑AACACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑tttactt < 5:991938/151‑5 (MQ=255) gcTTTTTTATGGGAGACCAGAAACAAA‑AAAACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTTACtt < 6:1449709/151‑1 (MQ=255) gcTTTTTTATGGGAGACCAGAAACAAA‑AAAACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTTACtt < 4:1096412/151‑1 (MQ=255) gcTTTTTTATGGGAGACCAGAAACAAA‑AAAACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTTACtt < 3:985419/151‑1 (MQ=255) gcTTTTTTATGGGACCCCCGTACCAAA‑AAAACACCCGATAGGCTGATCATTCATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑‑TTTACTtc < 7:241098/151‑1 (MQ=14) cTTTTTTATGGGAGACCAGAAACAAA‑AAAACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑ttttcttc > 1:463779/1‑146 (MQ=255) cTTTTTTATGGGAGACCAGAAAAAAA‑AAAAGACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑tttactt < 6:1497277/149‑5 (MQ=255) gtttttAGGGCAGACCACAAACAAC‑AACACACCCTTGAGCGTGTTAAATCATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑‑TTTACTtcat < 7:676514/150‑1 (MQ=14) tttttATGGGAGACCCGTAAACAT‑AACACAGCGGAGAGGGTGATCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑‑TTTACTtca < 3:276512/149‑1 (MQ=11) tttttATGGGAGACCAGAAACAAA‑AAAACACCGGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATCAGCCCGACGAGCTCCCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑‑TTTACTtcctc > 1:406351/1‑151 (MQ=18) tttttATGGGAGACCAGAAACAAA‑AAAACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑ttttcgtcatc > 7:794880/1‑144 (MQ=255) tttttATGGGAGACCAGAAACAAA‑AAAACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTTACTtc < 5:525642/149‑1 (MQ=255) tttttATGGGAGACCAGAAACAAA‑AAAACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTTACTtc < 8:1356193/149‑1 (MQ=255) tttttATGGGAGACCAGAAACAAA‑AAAACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACAGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑tttaaatcat > 8:1156673/1‑143 (MQ=255) tttttATGGGAGACCAGAAACAAA‑AAAACACCCGTTAGGGTGTTAAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑‑TTTACTtca < 2:1810670/149‑1 (MQ=255) tttttATGGCAGACCAGAAACAAA‑AAAACCCCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑‑TTTACTtca < 5:1839978/149‑1 (MQ=255) ttttATGGGAGACCAGAAACAAA‑AAAACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑tttacttgata > 3:412052/1‑142 (MQ=255) tttATGGGAGACCAGAAACAAA‑AAAACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTTACTtcatc < 5:1029061/150‑1 (MQ=255) ttATGGGAGACCAGAAACAAA‑AAAACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTTACTtcatca < 2:1562254/150‑1 (MQ=255) ttATGGGAGACCAGAAACAAA‑AAAACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTTACTtcatca < 7:1184829/150‑1 (MQ=255) ttgcgagaCCAGAAACAAA‑AAAAGACCGTTTATGGTGTTAAATTATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑‑TTTACTTCATCAAA‑t < 8:794212/146‑1 (MQ=14) aTGGGAGACCCGAAACAAA‑AACACCCCCGTTATGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑‑TTTACTTCATCAAA‑t < 1:452911/150‑1 (MQ=17) tGGGAGACCAGTAACAAT‑AAAAGACCCGTTATGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑‑TTTACTTCATCAAA‑tt < 6:1182982/150‑1 (MQ=17) gggAGACCAGCAAAAAA‑TACACACCATTTTTGGTTTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑‑TTTACTTCATCAAA‑tttt < 3:930735/151‑2 (MQ=11) gggAGACCAGAAACAAC‑AAAACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑‑TTTACTTCATCAAA‑tttt < 3:1738182/151‑2 (MQ=255) gggAGACCAGAAACAAA‑AAAAGACGCGTTTGGGTGTTCATTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑‑TTTACTTCATCAAA‑ttt < 6:970417/150‑1 (MQ=17) gggAGACCAGAAACAAA‑AAAACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTTACTTCATCAAA‑ttt < 5:401372/151‑1 (MQ=255) gggAGACCAGAAACAAA‑AAAACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTTACTTCATCAAA‑ttt < 1:1284060/151‑1 (MQ=255) gggAGACCAGAAACAAA‑AAAACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTTACTTCATCAAA‑tt < 2:1095266/150‑1 (MQ=255) gggAGACCAGAAACAAA‑AAAACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCACGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTTACTTCATCAAA‑ttt < 5:1436405/151‑1 (MQ=255) gggAGACCAGAAACAAA‑AAAACACCCGTTAGGGTGTTCAATAATTGGTTGAGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑‑TTTACTTCATCAAA‑tttt < 6:1005216/151‑2 (MQ=255) ggAGCCCAGAAACAAA‑AAAACACTCGTTAGGTTGTTAATTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑‑TTTACTTCATCAAA‑tttt < 4:122844/150‑2 (MQ=14) ggAGACCAGTACCAAA‑AAATCACCGGTTATGGTGTTCATTAATTGGTGGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑‑TTTACTTCATCAAA‑tttta < 8:892774/151‑3 (MQ=14) ggAGACCAGAAACAAA‑AAAACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGAGCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTTACTTCATCAAA‑TTTg < 1:1515869/151‑1 (MQ=255) ggAGACCAGAAACAAA‑AAAACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTTACTTCATCAAA‑TTTg < 3:1570079/151‑1 (MQ=255) gagcCCATAAAAAAA‑AACAGCTCCTTTAGGGTGTTCAATTATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑‑TTTACTTCATCAAA‑ttttaa < 6:1360177/151‑4 (MQ=11) gagaCCAGAAACAAA‑TACTCCCCCGTTATGTTGTTCAATTATTGGTTGCGGTGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑‑TTTACTTCATCAAA‑ttttaa < 1:1377190/151‑4 (MQ=11) gagaCCAGAAACAAA‑AAAACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTTACTTCATCAAA‑TTTGa < 2:483943/151‑1 (MQ=255) aCCAGAAACAAA‑AAAACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTTACTTCATCAAA‑TTTGAtt < 6:1831633/150‑1 (MQ=255) aCCAGAAACAAA‑AAAACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTTACTTCATCAAA‑TTTGATTg < 2:1248955/151‑1 (MQ=255) aCCAGAAACAAA‑AAAACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTTACTTCATCAAA‑TTTGATTg < 7:1436191/151‑1 (MQ=255) aCCAGAAACAAA‑AAAACACCCGTTAGGGTGTTCAATAATTGGTTGCGGCGGCAGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTTCTCCACCCCGCGTCACCGTACTGC‑TTTTACTTCATCAAA‑TTTGATTg < 7:216451/151‑1 (MQ=255) ccAGAAACAAA‑AAAACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTTACTTCATCAAA‑TTTGATTgg < 7:595652/151‑1 (MQ=255) ccAGAAACAAA‑AAAACACCCGATTTGGTGTTATTTCATTGGTTGCGGGGGCGGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑‑TTTACTTCATCAAA‑ttttaattgg < 3:1140224/151‑8 (MQ=11) ccAGAAAAAAA‑AAAACACCCGTTAGGGTGTTCATTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑‑TTTACTTCATCAAA‑ttttaattgg < 1:229493/151‑8 (MQ=14) cAGAAACAAA‑AAAACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTTACTTCATCAAA‑TTTGATTGGt < 5:749331/151‑1 (MQ=255) cAGAAACAAA‑AAAACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTTACTTCATCAAA‑TTTGATTGGt < 5:1149325/151‑1 (MQ=255) ccaaaCAAA‑AACACCCGCTTCTGGGTGTTAAATCATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑‑TTTACTTCATCAAATTTTAATTGGtt < 7:475676/149‑1 (MQ=11) aGAAACAAA‑AAAACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTTACTTCATCAAA‑TTTGATTGGtt < 1:1529807/151‑1 (MQ=255) aGAAACAAA‑AAAACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTTACTTCATCAAA‑TTTGATTGGtt < 8:1273085/151‑1 (MQ=255) aGAAACAAA‑AAAACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTTACTTCATCAAA‑TTTGATTGGtt < 7:954726/151‑1 (MQ=255) aGAAACAAA‑AAAACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTTACTTCATCAAA‑TTTGATTGGtt < 7:328320/151‑1 (MQ=255) aGAAACAAA‑AAAACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTTACTTCATCAAA‑TTTGATTGGtt < 7:1019087/151‑1 (MQ=255) aGAAAACAA‑AAAACACCCGTTAGGGTGGTCAATAATTGGGTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTTACTTCATCAAA‑TTTGATTGGtt < 5:580282/151‑1 (MQ=255) ccaacaaacaAAACAGCCTTTAGGGTGTTCAATCATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑‑TTTACTTCATCAAATTTTAATTGGtt < 7:642760/149‑1 (MQ=11) caaccaca‑aacaCACCGTTGAGGGTGATCATTCATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑‑TTTACTTCATCAAATTTTAATTGGTTg < 1:1736088/144‑1 (MQ=11) caaacaaa‑cAACCACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTTACTTCATCAAA‑TTTGATTGGTTg < 2:1616161/150‑1 (MQ=255) aaaCAAA‑AAAACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTTACTTCATCAAA‑TTTGATTGGTTGc < 5:802280/151‑1 (MQ=255) aaCAAT‑AAATCACCCTTTATGTTGTTAATTAATTGGTTGCGGGGGCCGGATTTGAACCGACTACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTTCTCCACCCCGCGTCACCGTACTGC‑‑TTTACTTCATCAAATTTTAATTGGTTGCg < 8:1598095/151‑1 (MQ=11) aaCAAA‑AACACACCCGTTAGGGTGTTCAATAATTGGTGGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTTACTTCATCAAA‑TTTGATTGGTTGCg < 5:1307876/151‑1 (MQ=255) aCAAA‑AAAACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTTACTTCATCAAA‑TTTGATTGGTTGCgg < 2:384465/151‑1 (MQ=255) aCAAA‑AAAACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTTACTTCATCAAA‑TTTGATTGGTTGCgg < 6:943960/151‑1 (MQ=255) aCAAA‑AAAACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTTACTTCATCAAA‑TTTGATTGGTTGCgg < 3:467009/151‑1 (MQ=255) aCAAA‑AAAACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTTACTTCATCAAA‑TTTGATTGGTTGCgg < 7:1350797/151‑1 (MQ=255) aCAAA‑AAAACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTTACTTCATCAAA‑TTTGATTGGTTGCgg < 2:610729/151‑1 (MQ=255) cccccaacccacCCGTCAGGGTGTTCACTCATTGGTGCCGGGGGCCGGATTCGACCCCACCACCTTCGCGTTATCCGCCCGACGAGCTACCAGGCTGCGCCACCCCGCGTCACCGTACT‑C‑CTTTACTTCATCAAATTTTAATTGGTTGCgg < 4:321823/142‑1 (MQ=2) aaa‑aaaaCACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTTACTTCATCAAA‑TTTGATTGGTTGCgggg < 7:260875/151‑1 (MQ=255) aaa‑aaaaCACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTTACTTCATCAAA‑TTTGATTGGTTGCgggg < 8:1683311/151‑1 (MQ=255) aaa‑aaaaCACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTTACTTCATCAAA‑TTTGATTGGTTGCgggg < 4:1036022/151‑1 (MQ=255) aa‑aaaaCACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAAGCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTTACTTCATCAAA‑TTTGATTGGTTGCggggg < 6:613250/151‑1 (MQ=255) aa‑aaaaCACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCCCGTACTGC‑‑TTTACTTAATCAAA‑ttttaa > 7:1692410/1‑135 (MQ=255) a‑aaaaCACCCGTTAGGGTGTTCAATAATTGGTGGCGGGGGCCGGATTTGAACGGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGc < 4:433399/151‑1 (MQ=255) aacacttctgTTAGGGTGTTCAATTATTGGTGGCGGTGGCGGGATTCGATCGTTCGAGGTTCGTGTTATGAGCGCGTCGAGCTACCTGTCTTGTGGACCCCGCGTCACCGTACTGC‑TTTTACTTGTTGAAA‑TTTTATTGGTTGCGGGGGcc < 2:1239064/142‑1 (MQ=9) cggttgtTCAATATATGGTTCCGCGGGCGGGAGCGGCACCTACCACCTTCGGGTTATCAGCCCGCCGAGCTACGAGGCTTCTCGAGCCCCCCTCACACTACAGC‑TCTTACTTCCTCATA‑TATGATTGGTTGCGGGGGCCGGATTTGAACcg < 5:765857/147‑1 (MQ=9) tgtTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCCGGTA‑TGCGTAGTAGTCTCTCATA‑TTTGATTGCTTGCGGGGGTCGGtttgcacgctccgc > 5:522618/1‑140 (MQ=2) gtTCATTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑tttac < 4:138183/104‑3 (MQ=17) gtTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑tttac > 3:137342/1‑102 (MQ=25) cTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCCCGGAGTGG‑GAGTATAAAAAGAAA‑TGTTATTCGTTGCGGGGGCGGTTTTTGCCCAGACGCCCTTCGGGTTATGAGGCAGAAGAGCTACGAGGCTGCTCcccc > 3:599582/1‑151 (MQ=2) ccGTACTGC‑TTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTAATGCTTTACTTCATCAAATTTTAATTGGTTGCgggg > 8:107412/1‑151 (MQ=255) cTGC‑TTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGc > 7:1281102/1‑80 (MQ=255) | GAATGGCGCTTTTTTATGGGAGACCAGAAACAAA‑AAAACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTACTTCATCAAATTTTAATTGGTTGCGGGG > DH1/936019‑936310 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |