| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | DH1 | 2,682,962 | T→A | intergenic (+90/+404) | ymfD → / ← icd | e14 prophage; SAM‑dependent methyltransferase/isocitrate dehydrogenase (NADP(+)) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | DH1 | 2,682,962 | 0 | T | A | 99.1% | 1574.7 / ‑1.3 | 427 | intergenic (+90/+404) | ymfD/icd | e14 prophage; SAM‑dependent methyltransferase/isocitrate dehydrogenase (NADP(+)) |
| Reads supporting (aligned to +/- strand): ref base T (2/2); new base A (189/232); total (192/235) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 427 total aligned reads displayed.
AGTCGTGGAGTAAAGCAGGAAGTTCATATGTCACTGTTGGGAGTTGTAATGCAATATAATACGATAATAATTCCCTAGGTTAAACAGTCTCAGTACTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGTACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGAGTAGTTGATACAAAACCGGCAATTTAACAATATTTGAGCGGGTGTAAGGAGTGGTAATTCATAATTGTCCTAATAACAGTGAATAC > DH1/2682814‑2683111 | gTCGTGGAGTAAAGCAGGAAGTTCATATGTCACTGTTGGGAGTTGTAATGCAATATAATACGATAATAATTCCCTAGGTTAAACAGTCTCAGTACTAAAGATGTATGTGAAGGTGACGCGCTCGCGGCCTTTTTTACATTCCGCATGAAcc > 4:1749716/1‑151 (MQ=255) tCGTGGAGTAAAGCAGGAAGTTCATATGTCACTGTTGGGAGTTGTAATGCAATATAATACGATAATAATTCCCTAGGTTAAACAGTCTCAGTACTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCt > 6:507797/1‑151 (MQ=255) cGTGGAGTAAAGCAGGAAGTTCATATGTCACTGTTGGGAGTTGTAATGCAATATAATACGATAATAATTCCCTAGGTTAAACAGTCTCAGTACTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTg < 2:457343/151‑1 (MQ=255) gTGGAGTAAAGCAGGAAGTTCATATGTCACTGTTGGGAGTTGTAATGCAATATAATACGATAATAATTCCCTAGGTTAAACAGTCTCAGTACTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTg > 6:288635/1‑150 (MQ=255) gAGTAAAGCAGGAAGTTCATATGTCACTGTTGGGAGTTGTAATGCAATATAATACGATAATAATTCCCTAGGTTAAACAGTCTCAGTACTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACg < 2:295559/151‑1 (MQ=255) aGTAAAGCAGGAAGTTCATATGTCACTGTTGGGAGTTGTAATGCAATATAATACGATAATAATTCCCTAGGTTAAACAGTCTCAGTACTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGc < 5:1018280/151‑1 (MQ=255) aaaGCAGGAAGTTCATATGTCACTGTTGGGAGTTGTAATGCAATATAATACGATAATAATTCCCTAGGTTAAACAGTCTCAGTACTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTa > 1:912441/1‑150 (MQ=255) aaGCAGGAAGTTCATATGTCACTGTTGGGAGTTGTAATGCAATATAATACGATAATAATTCCCTAGGTTAAACAGTCTCAGTACTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAg < 7:559525/151‑1 (MQ=255) aGCAGGAAGTTCATATGTCACTGTTGGGAGTTGTAATGCAATATAATACGATAATAATTCCCTAGGTTAAACAGTCTCAGTACTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAgg < 1:202942/151‑1 (MQ=255) aGCAGGAAGTTCATATGTCACTGTTGGGAGTTGTAATGCAATATAATACGATAATAATTCCCTAGGTTAAACAGTCTCAGTACTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAgg > 1:73097/1‑151 (MQ=255) cAGGAAGTTCATATGTCACTGTTGGGAGTTGTAATGCAATATAATACGATAATAATTCCCTAGGTTAAACAGTCTCAGTACTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTg < 2:101592/151‑1 (MQ=255) aGGAAGTTCATATGTCACTGTTGGGAGTTGTAATGCAATATAATACGATAATAATTCCCTAGGTTAAACAGTCTCAGTACTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTg > 7:1170799/1‑150 (MQ=255) aGGAAGTTCATATGTCACTGTTGGGAGTTGTAATGCAATATAATACGATAATAATTCCCTAGGTTAAACAGTCTCAGTACTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGa < 2:1121591/151‑1 (MQ=255) gAAGTTCATATGTCACTGTTGGGAGTTGTAATGCAATATAATACGATAATAATTCCCTAGGTTAAACAGTCTCAGTACTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGAtt < 3:1776305/151‑1 (MQ=255) gAAGTTCATATGTCACTGTTGGGAGTTGTAATGCAATATAATACGATAATAATTCCCTAGGTTAAACAGTCTCAGTACTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGAtt < 5:1364344/151‑1 (MQ=255) aaGTTCATATGTCACTGTTGGGAGTTGTAATGCAATATAATACGATAATAATTCCCTAGGTTAAACAGTCTCAGTACTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTg > 3:686020/1‑151 (MQ=255) cATATGTCACTGTTGGGAGTTGTAATGCAATATAATACGATAATAATTCCCTAGGTTAAACAGTCTCAGTACTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCAccc > 1:152459/1‑151 (MQ=255) tCACTGTTGGGAGTTGTAATGCTATATAATACGATAATAATTGCCTAGGTTAAACAGTCTCAGTACTAAAGATGTATGTGAAGGGGCCGCGCTCGGGGCCTATTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCCCCCAAtccg > 3:1307573/1‑148 (MQ=255) cACTGTTGGGAGTTGTAATGCAATATAATACGATAATAATTCCCTAGGTTAAACAGTCTCAGTACTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCt > 3:223935/1‑151 (MQ=255) cACTGTTGGGAGTTGTAATGCAATATAATACGATAATAATTCCCTAGGTTAAACAGTCTCAGTACTAAAGATGTACGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGcc < 6:609367/150‑1 (MQ=255) gTTGGGAGTTGTAATGCAATATAATACGATAATAATTCCCTAGGTTAAACAGTCTCAGTACTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATCAACCTGAACGCTAAGGTGATTGCACCCAATCCCTGTTg > 6:1479184/1‑151 (MQ=255) ttGGGAGTTGTAATGCAATATAATACGATAATAATTCCCTAGGTTAAACAGTCTCAGTACTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTgg > 8:941920/1‑151 (MQ=255) tGGGAGTTGTAATGCAATATAATACGATAATAATTCCCTAGGTTAAACAGTCTCAGTACTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCGTGTTgg < 3:1439391/150‑1 (MQ=255) tGGGAGTTGTAATGCAATATAATACGATAATAATTCCCTAGGTTAAACAGTCTCAGTACTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTgg < 6:810446/150‑1 (MQ=255) gggAGTTGTAATGCAATATAATACGATAATAATTCCCTAGGTTAAACAGTCTCAGTACTAAAGATGTATGTGAAGGGGCCTATCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCt > 8:828708/1‑151 (MQ=255) gggAGTTGTAATGCAATATAATACGATAATAATTCCCTAGGTTAAACAGTCTCAGTACTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCt < 7:1420808/151‑1 (MQ=255) gAGTTGTAATGCAATATAATACGATAATAATTCCCTAGGTTAAACAGTCTCAGTACTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGt < 2:238936/151‑1 (MQ=255) aaTGCAATATAATACTATAATAATTCCCTAGGTTAAACAGTCTCAGTACTAAAGATGTATGTGAAGGGGCGGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTgg < 2:791998/151‑1 (MQ=255) aaTGCAATATAATACGATAATAATTCCCTAGGTTAAACAGTCTCAGTACTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTgg > 4:1444381/1‑151 (MQ=255) aaTGCAATATAATACGATAATAATTCCCTAGGTTAAACAGTCTCAGTACTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTg < 5:874920/150‑1 (MQ=255) aaTATAATACGATAATAATTCCCTAGGTTAAACAGTCTCAGTACTAAAGATGTATGTGAAGGGG‑‑GCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTcc > 5:735800/1‑151 (MQ=255) atatAATACGATAATAATTCCCTAGGTTAAACAGTCTCAGTACTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTc > 2:1719354/1‑151 (MQ=255) ataataCGATAATAATTCCCTAGGTTAAACAGTCTCAGTACTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTccc > 2:681043/1‑151 (MQ=255) ataCGATAATAATTCCCTAGGTTAAACAGTCTCAGTACTAAAGATGTATGTGCAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCggg < 4:188969/151‑1 (MQ=255) taCGATAATAATTCCCTAGGTTAAACAGTCTCAGTACTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGt > 3:99983/1‑151 (MQ=255) aCGATAATAATTCCCTAGGTTAAACAGTCTCAGTACTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGt < 6:770305/150‑1 (MQ=255) aCGATAATAATTCCCTAGGTTAAACAGTCTCAGTACTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGt < 2:1428283/150‑1 (MQ=255) aCGATAATAATTCCCTAGGTTAAACAGTCTCAGTACTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGt < 2:350471/150‑1 (MQ=255) aCGATAATAATTCCCTAGGTTAAACAGTCTCAGTACTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTg < 5:1210035/151‑1 (MQ=255) cGATAATAATTCCCTAGGTTAAACAGGCTCAGTACTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGa < 8:1200180/151‑1 (MQ=255) gATAATAATTCCCTAGGTTAAACAGTCTCAGTACTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTAGGCTGTCCCCTGGCGAGTCCCGGCTg > 4:1212975/1‑149 (MQ=255) taataaTTCCCTAGGTTAAACAGTCTCAGTACTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGagt > 4:1672105/1‑150 (MQ=255) aataatTCCCTAGGTTAAACAGTCTCAGTACTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGagt > 1:1146950/1‑149 (MQ=255) ataatTCCCTAGGTTAAACAGTCTCAGTACTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGagtagt < 7:955397/151‑1 (MQ=255) aatTCCCTAGGTTAAACAGTCTCAGTACTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTGTTTACATTCCGCAGGAACCGGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGCGTCCCGGGTGAGTAGGTg > 6:1795249/1‑151 (MQ=255) atTCCCTAGGTTAAACAGTCTCAGTACTAAAGATGTATGTGACGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGTGAGTCCCGGGTGAGTAGTTGa < 4:34451/151‑1 (MQ=255) atTCCCTAGGTTAAACAGTCTCAGTACTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCCGGTGAGTAGTTg > 2:577949/1‑150 (MQ=255) tCCCTAGGTTAAACAGTCTCAGTACTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGAGTAGTTGAt > 6:1209315/1‑150 (MQ=255) cccTAGGTTAAACAGTCTCAGTACTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGAGTAGTTGATa < 1:1798721/150‑1 (MQ=255) cccTAGGTTAAACAGTCTCAGTACTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGAGTAGTTGATAc > 8:1699682/1‑151 (MQ=255) gTTAAACAGTCTCAGTACTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGAGTAGTTGATACAAAAcc < 8:801436/151‑1 (MQ=255) gTTAAACAGTCTCAGTACTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGAGTAGTTGATACAAAAcc < 7:802421/151‑1 (MQ=255) aaCAGTCTCAGTACTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGAGTAGTTGATACAAAACCGGc > 2:1196795/1‑150 (MQ=255) aCAGTCTCAGTACTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGAGTAGTTGATACAAAACCGGCaa < 7:1674544/151‑1 (MQ=255) aGTCTCAGTACTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGAGTAGTTGATACAAAACCGGCAAtt > 7:1789348/1‑151 (MQ=255) tctcAGTACTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGAGTAGTTGATACAAAACCGGCAAttt > 8:1041479/1‑150 (MQ=255) cAGTACTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGAGTAGTTGATACAAAACCGGCAATTTAAc < 3:345983/150‑1 (MQ=255) cAGTACTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGAGTAGTTGATACAAAACCGGCAATTTAAc < 5:1502054/150‑1 (MQ=255) cAGTACTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGAGTAGTTGATACAAAACCGGCAATTTAACa < 4:1034928/151‑1 (MQ=255) cAGTACT‑AAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGAGTAGTTGATACAAAACCGGCAATTTAACa < 8:452368/150‑1 (MQ=255) gTACTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGAGTAGTTGATACAAAACCGGCAATTTAACAat < 1:103044/151‑1 (MQ=255) tACTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGAGTAGTTGATACAAAACCGGCAATTTAACAat < 7:630676/150‑1 (MQ=255) tACTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGAGTAGTTGATACAAAACCGGCAATTTAACAat > 3:169462/1‑150 (MQ=255) cTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGAGTAGTTGATACAAAACCGGCAATTTAACAATAtt > 7:423152/1‑151 (MQ=255) aaaGTTGTATGGGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCTTGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGAGTAGTTGATACAAAACCGGCAATTTAACAatat < 4:823699/148‑1 (MQ=255) aaaGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGAGTAGTTGATACAAAACCGGCAATTTAACAATAttt < 8:222570/150‑1 (MQ=255) aaGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGAGTAGTTGATACAAAACCGGCAATTTAACAATATTTg > 4:1305500/1‑150 (MQ=255) aaGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGAGTAGTTGATACAAAACCGGCAATTTAACAATATTTGa < 4:554201/151‑1 (MQ=255) gtatgtGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGAGTAGTTGATACAAACCCGGCAATTTAACAATATTTGAGCggg > 4:660816/1‑151 (MQ=255) gtatgtGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGAGTAGTTGATACAAAACCGGCAATTTAACAATATTTGAGCggg > 7:35460/1‑151 (MQ=255) gtatgtGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGAGTAGTTGATACAAAACCGGCAATTTAACAATATTTGAGCgg < 5:1808940/150‑1 (MQ=255) gtaggtGACGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGAGTAGTTGATACAAAACCGGCAATTTAACAATATTTGAGCgg < 8:153078/150‑1 (MQ=255) gAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGAGTAGTTGATACAAAACCGGCAATTTAACAATATTTGAGCGGGTGTaa < 2:1351978/150‑1 (MQ=255) gAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGAGTAGTTGATACAAAACCGGCAATTTAACAATATTTGAGCGGGTGTaa < 6:911313/150‑1 (MQ=255) gAAGGGGCCGCGCTCGCGGCCGTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGAGTAGTTGATACAAAACCGGCAATTTAACAATATATGAGCGGGTGTAAg < 2:883941/151‑1 (MQ=255) aaGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGAGTAGTTGATACAAAACCGGCAATTTAACAATATTTGCGCGGGTGTAAgg > 8:367140/1‑151 (MQ=255) aGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGAGTAGTTGATACAAAACCGGCAATTTAACAATATTTGAGCGGGTGTAAGGa < 6:425086/151‑1 (MQ=255) ggCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGAGTAGTTGATACAAAACCGGCAATTTAACAATATTTGAGCGGGTGTAAGGAGTg < 1:124366/151‑1 (MQ=255) gCCGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACACAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGAGTAGTTGATACAAAACCGGCAATTTATCAATATTTGAGCGGGTGTAAGGAGTgg > 5:1745685/1‑151 (MQ=255) ccGCGCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGAGTAGTTGATACAAAACCGGCAATTTAACAATATTTGAGCGGGTGTAAGGAGTGGt > 1:1636401/1‑151 (MQ=255) cgcgCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGAGTAGTTGATACAAAACCGGCAATTTAACAATATTTGAGCGGGTGTAAGGAGTGGTa < 3:615805/151‑1 (MQ=255) cgcgCTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTCAGTAGTTGATACAAAACCGGCAATTTAACAATATTTGAGCGGGTGTAAGGAGTGGt > 5:505200/1‑150 (MQ=255) gcgcTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGAGTAGTTGATACAAAACCGGCAATTTAACAATATTTGAGCGGGTGTAAGGAGTGGTaa < 1:431182/151‑1 (MQ=255) gcgcTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGAGTAGTTGATACAAAACCGGCAATTTAACAATATTTGAGCGGGTGTAAGGAGTGGTa > 8:658953/1‑150 (MQ=255) gcTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGAGTAGTTGATACAAAACCGGCAATTTAACAATATTTGAGCGGGTGTAAGGAGTGGTAAtt < 3:1388526/151‑1 (MQ=255) cTCGCGGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGAGTAGTTGATACAAAACCGGCAATTTAACAATATTTGAGCGGGTGTAAGGAGTGGTAAtt > 5:547827/1‑150 (MQ=255) cgcgGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGAGTAGTTGATACAAAACCGGCAATTTAACAATATTTGAGCGGGTGTAAGGAGTGGTAATTCa < 5:452504/150‑1 (MQ=255) cgcgGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGAGTAGTTGATACAAAACCGGCAATTTAACAATATTTGAGCGGGTGTAAGGAGTGGTAATTCAt < 8:55265/151‑1 (MQ=255) gcgGCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGAGTAGTTGATACAAAACCGGCAATTTAACAATATTTGAGCGGGTGTAAGGAGTGGTAATTCATa < 8:1358337/151‑1 (MQ=255) ggCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGAGTAGTTGATACAAAACCGGCAATTTAACAATATTTGAGCGGGTGTAAGGAGTGGTAATTCATAAt < 5:393435/151‑1 (MQ=255) gCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGAGTAGTTGATACAAAACCGGCAATTTAACAATATTTGAGCGGGTGTAAGGAGTGGTAATTCATAAtt > 2:1621137/1‑151 (MQ=255) gCCTTTTTTACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGAGTAGTTGATACAAAACCGGCAATTTAACAATATTTGAGCGGGTGTAAGGAGTGGTAATTCATAAtt < 5:1633770/151‑1 (MQ=255) ttttttACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGAGTAGTTGATAGAAAACCGGCAATTTAACAATATTTGAGCGGGTGTAAGGAGTGGTAATTCATAATTGTc > 4:1101638/1‑151 (MQ=255) ttACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGAGTAGTTGATACAAAACCGGCAATTTAACAATATTTGAGCGGGTGTAAGGAGTGGTAATTCATAATTGTCCta < 7:778955/150‑1 (MQ=255) tACATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGAGTAGTTGATACAAAACCGGCAATTTAACAATATTTGAGCGGGTGTAAGGAGTGGTAATTCATAATTGTCCtaat > 6:1310958/1‑151 (MQ=255) aCATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGAGTAGTTGATACAAAACCGGCAATTTAACAATATTTGAGCGGGTGTAAGGAGTGGTAATTCATAATTGTCCtaata < 6:1519582/151‑1 (MQ=255) aCATTCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGAGTAGTTGATACAAAACCGGCAATTTAACAATATTTGAGCGGGTGTAAGGAGTGGTAAATCATAATTGTCCtaat > 3:1538322/1‑150 (MQ=255) aTTCCGCATGCACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGAGTAGTTGATACAAAACCGGCAATTTAACAATATTTGAGCGGGTGTAAGGAGTGGTAATTCATAATTGTCCTAATAAc < 6:1076957/151‑1 (MQ=255) tCCGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGAGTAGTTGATACAAAACCGGCAATTTAACAATATTTGAGCGGGTGTAAGGAGTGGTAATTCATAATTGTCCTAATAAc > 7:1084517/1‑149 (MQ=255) ccGCATGAACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGAGTAGTTGATACAAAACCGGCAATTTAACAATAATTGAGCGGGTGTAAGGAGTGGTAATTCATAATTGTCCTAATAACAGt > 2:1068443/1‑151 (MQ=255) | AGTCGTGGAGTAAAGCAGGAAGTTCATATGTCACTGTTGGGAGTTGTAATGCAATATAATACGATAATAATTCCCTAGGTTAAACAGTCTCAGTACTAAAGATGTATGTGAAGGGGCCGCGCTCGCGGCCTTTTTTACATTCCGCATGTACCTGAACGCTAAGGTGATTGCACCCAATGCCTGTTGGCTGTCCCCTGGCGAGTCCCGGGTGAGTAGTTGATACAAAACCGGCAATTTAACAATATTTGAGCGGGTGTAAGGAGTGGTAATTCATAATTGTCCTAATAACAGTGAATAC > DH1/2682814‑2683111 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |