| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | DH1 | 1,065,605 | 0 | A | T | 24.7% | 434.8 / 120.2 | 256 | intergenic (+40/‑23) | ECDH1_RS05245/ECDH1_RS05250 | tRNA‑Arg/tRNA‑Arg |
| Reads supporting (aligned to +/- strand): ref base A (115/74); new base T (41/21); total (158/98) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.46e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 268 total aligned reads displayed.
CAAAAAATCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCGGAATTA > DH1/1065457‑1065754 | aaaaaaTCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATcagc > 7:1269916/1‑150 (MQ=255) aaaaaTCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATCTAGTACGTAATATTGCTCTAGGAACGGAAGG‑‑AATATcatg > 5:1565435/1‑147 (MQ=14) aaTCTGCAGTACTGTAAGATGCGCTCTCCAGCGGTAGCTCAGCTGTCTAGTGTAATCGGCTCCGACCGGTTGGGTCCGAGGGTGGAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTaa < 7:816780/151‑1 (MQ=9) aTCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTATTAGCGGTATC‑‑AATATcagctcgaa > 2:1138567/1‑145 (MQ=255) attcAGTAAAGTAAGTTTCCGCCTGACTGCGTTGATGTGCTTGATTTTGTACTCGGCTAGGAACGGATCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTaaaa < 7:902328/147‑1 (MQ=17) taagtTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATAATACTAAATATGCATATATTAACGTTAGC‑‑AATATCAGCAGTAAATAAAATTTACCg > 8:506638/1‑150 (MQ=14) tttcATCCGTAGCTTATCTTGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTa < 6:725416/147‑1 (MQ=255) aTGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATCTCTTACTTCATATGGCGAAAGGACGGGACTC‑‑AAGAGCAGCAGGAAAATAACTGTccccctcgggacgttc > 5:79829/1‑138 (MQ=14) agagggaggttaGCTGGTTTGTGTACTCGGCGACGATCGCTCGGGTCGGAGGGTCTAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCa < 7:1997697/140‑1 (MQ=14) tAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATCTAATACTTAATATGGATAAAGTAACGTAAAC‑‑AATATCAGCAGTAAAATAAATTACCCAATACATCAGTAACTCatcgat > 4:1512908/1‑146 (MQ=17) tAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAgaat > 3:656147/1‑107 (MQ=255) tACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATCTCTTAATTTATTTGGCTGTTGTAGCGGGTGC‑‑AATAGCTTCAGTAATTAACATGTCCCGATGCCTCGGTAGCTGGGGTTGATAGAGTGGTCGGCtcgg > 3:2231865/1‑148 (MQ=9) cGGCTCCGACCCGCGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAAcc < 1:1793313/151‑1 (MQ=255) ggCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATCGTCCTAGATATGCCTGTAGTAGCGGTAGC‑‑AATATCAGCAGTAAATTACATGTCGCGATGCGTACGTAGAGCATCTGGATAGACTGCTCggatcggacacc > 7:1403224/1‑141 (MQ=16) gCTACGAACGGGGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGa < 3:663074/151‑1 (MQ=255) cTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAGAATAAATTTCCCCCTGGATCCGTAGCTCAGCGGGATAGAGTACTAGGCGACGAAccc > 7:2272142/1‑148 (MQ=17) tACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATAGTACTTTATATTGCTGTATTACCGGTTAG‑‑AATATCACCAGTAAAATAAAGTTCCCCATAGGTAAGTAGAGCAGCAGGATACAGAACTCCGATACGacacgcgc > 7:1897174/1‑144 (MQ=9) acgagcgctccgctCGGAGCGTCGAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCg < 3:1875590/138‑1 (MQ=14) cGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTATACGAAATATATCGTAAGACCCTCTAGG‑‑AATATAAGAAGTAAAAGACATTTCAAGATGAATCGGTAGCACAGCTGGATAAAATAATAGGCTGCGGGCCGCGCGGTCggg > 8:1184319/1‑150 (MQ=2) gggcgcgcGGAGAGTCTAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTATACTAGCGCTATA‑‑AATATCAGCAGTAAAATAACTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAg < 5:599551/144‑1 (MQ=11) cgctctgagcgtctaaTCCTCCCGTATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGCTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGtt < 7:1696799/137‑1 (MQ=14) cgctcggcgcgtCGAATCCTCCCGGAGGCACCATCTCTTAGTTTATCTGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGtt < 1:1104364/140‑1 (MQ=14) cGGTAGGAGCGTCTAATCCTCCCCGATCCAACATCTCTTAGTTTATCTGGATTTACTAGCTGTATA‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGtt < 6:940595/151‑1 (MQ=14) ggtaggcgcgtataaTCCGCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATA‑‑AATATCAGCAGTAAAATAACTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTc < 5:715303/138‑1 (MQ=11) gctaggcgattCTAATCCTCCGGGATGCACGCTCTATTACTTTATATCTGTTTAGTAGCGTTATA‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTc < 7:2300177/142‑1 (MQ=14) gcggcggTTCTAATGCTCGGGGATGCACCATCTCTTACTTGAGATGGGTTTAGTAGGGTTATC‑‑AATATCAGCAGTAAACTAACTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGa < 5:1388690/150‑1 (MQ=14) ggAGGTTCGAATCCTCCCGGATGCACCATATTATACTTAATATTGATATATTAACGGTTTC‑‑AATATCAACAGTAAAATAAATTTCCCGATACATAAGTAGAAGATCTTTATAGAGAACTCAAGTACGAACAGATCGGTAAGAGGTTCGAAt > 8:1551721/1‑151 (MQ=255) gcgagtctaaTCCTCCCCGACGCACGATCTCTTACTTGATATGGCTTTACTAGCTCTATA‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAAtc < 5:2138009/143‑1 (MQ=14) aGGTTCGAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAtaataa > 8:1049272/1‑78 (MQ=255) aGGTTCGAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAGAATAAATTTtcc > 4:1023421/1‑85 (MQ=255) ggTTCGAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTGAGCGGGATAGACTACGGGACTACCAACCGCGGGCACGCAGGTACGAAtgcg > 7:708008/1‑148 (MQ=14) gcgtgtaaTCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAAtcct < 5:932327/145‑1 (MQ=255) ttCGAATCCTCCCGGATGCACCATATCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCCTCCGTAGATCAGCTGGATAGAGTACTCGGCTACGCCCAGAGCGGTCGGAGGTTCGAAtcctcc > 5:1853010/1‑151 (MQ=14) tCGAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGt > 8:1727952/1‑67 (MQ=39) gAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTGAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAAtagtaccgg > 1:733558/1‑143 (MQ=255) gAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTACCGATGCATACCTACCTGCGATGTATAAAGTACTAGGGTAAGAGAAGAAGGGTCGTAGGTTCGATTCGTCACgg > 8:900858/1‑151 (MQ=9) aaTCCTCCCGTATTCACTATCTCATTCTTGATATGTCTTTAGTAGCTTTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCgg < 4:899491/150‑1 (MQ=14) aaTCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCgg < 7:590878/150‑1 (MQ=40) tcctccCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATg > 8:2108450/1‑151 (MQ=39) ctccCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATcag > 1:1233451/1‑56 (MQ=35) aTGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATAtt > 3:2117790/1‑151 (MQ=39) tGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATtc > 7:1310754/1‑151 (MQ=39) gCACTATCTCATCATTGATAGGGCTTTAGTCGGGGTCAC‑‑AATATCATGACGAAAATAAGTTTCCCGATGCATCCGTAGCTCATCTGTCTATAGTCATCGGCCAGCAACGGGTGGGTCGCAGGGTCGAATCCTCCCGGATGCACCATATtct < 3:1075758/151‑1 (MQ=2) ccccctctcTTCCTTGATATGGCTTTTTTATAGGTATC‑‑TCTATCACCAGTTATATAAATTTCCCTAGTCATTCTTTGCTTAGATGTATAGCTTACTCTGTTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATtctc < 4:2151683/146‑1 (MQ=9) cACCATCTCTTACTTGATATGGGTTTAGTAGCTGTATC‑‑AATATCAGCAGTAAAATAAATTTCACGATGCAACCGAACCTCATCTGGATAGAGTAAACGGCTACGAACCGAGCCTTCGGAGGTTGCAATACACCCGGATGCACCATATtcac > 3:1736225/1‑149 (MQ=255) cACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATtctc > 4:1380673/1‑151 (MQ=39) cATCTCTTACTTGATATGGCTTTAGTAGCGGTAGC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTACCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATGCTCCCGGATGCCGCATCTTCTCCg > 4:38470/1‑150 (MQ=14) tctTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGtaacc > 5:1369737/1‑149 (MQ=25) tatttgttatcgggCTTTATTAGCGTTATC‑‑AATATCAGCAGTAAACTAACTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGaa < 8:1666315/135‑1 (MQ=11) ctTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCt > 3:1464008/1‑151 (MQ=255) ctTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTACCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACCAACCGAGCGGTCGGAGGTTCGAATCCTCCCCGATGCACCATATTCTCCGACATcg > 3:91104/1‑150 (MQ=255) tACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTc > 7:1211687/1‑151 (MQ=255) tACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTc > 1:554516/1‑151 (MQ=255) aCTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTag > 8:1334882/1‑40 (MQ=14) aCTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTc > 5:1313720/1‑150 (MQ=255) ttGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATtctactaaggcagaacc > 2:1611980/1‑137 (MQ=255) actgctctatatgagCGATATA‑‑AAAATCAGCAGTAAAATAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGATGTTCGAATCCTCCCGGATGCACCATATTCTCCTAAATCTTCAGCaa < 1:1850529/137‑1 (MQ=11) atGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTATACGAAATCTTCatgaatt > 6:259591/1‑144 (MQ=255) tGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGa > 3:1213741/1‑150 (MQ=255) cggCTTTAGTAGCGGTATCAAAAAATCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTATCCTAAATATTCAgatatt > 8:1225068/2‑146 (MQ=14) cTTTAGTAGCGGTATCAAAAAATCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCTATATATTCAGATATGagc > 8:58415/1‑149 (MQ=14) cTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGt > 7:883659/1‑151 (MQ=255) tttAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACAGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGtt > 8:2227160/1‑150 (MQ=255) tattagagctttata‑‑AATATCTGCATTAAAATAATTTTACCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGt < 4:2032053/139‑1 (MQ=11) ttAGTAGCGGTATCAAAAAATCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTATACGAAATATTCAGCAAGGAGGGt > 1:2058117/1‑151 (MQ=11) ttAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTAt > 2:122558/1‑151 (MQ=255) agactagCGCTCTA‑‑AAAATCAGCAGTAAACTAACTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGt < 1:2124524/145‑1 (MQ=14) tttgaggtatata‑‑AATATCTGCAGTAAACTAATTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTAt < 6:1663004/141‑1 (MQ=11) tagtagCGGTATCAAAAAATCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATAATCCTAAATATTCAGAAATTAACGt > 6:5202/1‑150 (MQ=14) tactttgcgtttgaaaTATATGCATTAAATTATATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGTAACCTTCAGCAATGAAGGTa < 4:1047800/136‑1 (MQ=11) agtagCGGTATCAAAAAATCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTATACGAGATCTTCAGCaa > 5:347466/1‑142 (MQ=11) agtagCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCg > 3:1042496/1‑151 (MQ=255) agtagCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCg > 6:109992/1‑151 (MQ=255) taggtatata‑‑AATATCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGa < 2:1841308/144‑1 (MQ=11) aggtttata‑‑AATATCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGaa < 6:1372091/145‑1 (MQ=11) agcgctggagctacctcatcaGTAAACTAACTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCg < 1:1021697/135‑1 (MQ=14) agCGGTATA‑‑AATATCAGCAGTAAACTAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGaa < 7:21951/150‑1 (MQ=255) cGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCg > 5:1018383/1‑104 (MQ=40) ggTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCAACATATTCTACGAAATATTCAGAAATGAAGGTATCGAagatt > 4:1249639/1‑149 (MQ=255) ttata‑‑AATATCTGCAGTAAACTAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAgg < 7:1541211/149‑1 (MQ=255) gTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGt > 1:2256050/1‑151 (MQ=255) gTATA‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGTAACCTTCAGCAATGAAGGTATCGAagagat < 6:1924135/151‑3 (MQ=9) atcaaaaaatCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATAATACGAAATCTTCAGAAATGAACGTATAGaatatg > 4:1361177/9‑146 (MQ=11) aTC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGCATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGATGTat > 2:643781/1‑150 (MQ=255) tC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTccc > 2:433185/1‑98 (MQ=255) tC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGc > 4:779004/1‑151 (MQ=255) aaaaatCTGCAGTAAAGTAAGTTTCCCGAGGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTGTCCGTGATATTGAGGTATGATGGTATGGAAGATGtcc > 5:1963806/5‑147 (MQ=11) aaaTATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCg < 7:350930/150‑1 (MQ=255) aaTATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCgg > 4:610122/1‑151 (MQ=255) atatCCGAAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAg < 7:1678382/81‑1 (MQ=255) atatCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGTAACCTTCAGCAATGAAGGTATCGAAGAGATAGCggt > 5:183230/1‑150 (MQ=2) aaatCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATAATACTAAATATTCAGAAATTAAGGTATAGAATAGGTacagt > 6:995205/3‑146 (MQ=11) aaatCCGCAGTAAATTAAATATCCCGATCCATCCGTAGCGCAGCTGGATATAGTCAGCGGATACGACACGAGCGGTCTTAGGTTCTAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCGGa < 7:965385/149‑1 (MQ=14) aaatCAGCAGTAAACTAACTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAg < 3:1362694/145‑1 (MQ=255) tatCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGtaac < 1:9695/117‑2 (MQ=25) atCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATAGTACTAAATATTCAGAAATGAACGTATAGaatatcaagcgtaa > 4:1689898/1‑138 (MQ=11) atCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATAATACTAAATATTCAGAAATTAACGTAACGAagatcaacagtaa > 8:1398882/1‑140 (MQ=1) atCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTgg > 4:1955885/1‑45 (MQ=255) cagcagTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAAtcct > 2:1773088/1‑88 (MQ=39) agcagTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCGGAATTa > 1:500112/1‑150 (MQ=255) | CAAAAAATCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCGGAATTA > DH1/1065457‑1065754 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |