Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*DH12,169,5480GT26.7% 602.5 / 85.3 319P671Q (CCG→CAG) rsxCelectron transporter RsxC
Reads supporting (aligned to +/- strand):  ref base G (56/177);  new base T (16/69);  total (73/246)
Fisher's exact test for biased strand distribution p-value = 3.66e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 324 total aligned reads displayed.

GCGGCAACTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACG‑GCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCG  >  DH1/2169398‑2169697
                                                                                                                                                      |                                                                                                                                                      
gcgGCAACTGCCGCTTTGCGCGGATCTACCTGTTCTTCTGGTACCGGATTAGCCTGTTGCTGTTCCCGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCg                                                                                                                                                        <  8:2101837/151‑1 (MQ=255)
   gCAACTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGtt                                                                                                                                                     <  7:846858/151‑1 (MQ=255)
    cAACTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTg                                                                                                                                                    <  8:1043532/151‑1 (MQ=255)
    cAACTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGCCAGCTTTGCGCCGATCGACATGTTGTGATGCCTCCCGTATAGCCGGttt                                                                                                                                                    >  7:2150715/1‑150 (MQ=17)
          ccGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTc                                                                                                                                              <  8:1811328/151‑1 (MQ=255)
           ggCTTTGCGCGGATCAACGTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTcc                                                                                                                                             <  7:1803805/150‑1 (MQ=255)
           cGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTATGATCGGATCAAACTGTTCTTCTGGATCCGCATTAGCCGGTTGCTGTTcc                                                                                                                                             >  8:1664332/1‑151 (MQ=255)
            gCTTTGCGCGGAGCAACCTGTTCTTCTGGTACCGCATTAGCCTGGTGCTGTGCCAGCTTGCGGGCGTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTccc                                                                                                                                            <  4:191791/151‑1 (MQ=255)
             cTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGATTGCGAGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGAGATCCGCAGATCCACCTGTACTTATAGATACTCATTAGCAgggtacttgtccat                                                                                                                                           >  6:927001/1‑139 (MQ=14)
                 gcgcGGATCAACCTGTTCTTCTGGTACCTCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTTGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGttt                                                                                                                                        <  6:424922/150‑1 (MQ=255)
                 gcgcGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCGAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGttt                                                                                                                                        <  7:1609840/150‑1 (MQ=255)
                 gcgcGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGttt                                                                                                                                        <  5:1751278/150‑1 (MQ=255)
                 gcgcGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGttt                                                                                                                                        <  7:2023197/150‑1 (MQ=255)
                    gtgATGAACCTGTTCTTCTGGTACGGCTTTAGCCTGTTGCTGTTCGTGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTgcgc                                                                                                                                    <  2:1193817/149‑1 (MQ=37)
                       aTCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCTCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCCACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCGGTTTGCGCGCt                                                                                                                                 >  7:2050254/1‑151 (MQ=255)
                          aaCTTGTTTTTCTGGTACGTCATTAGCGTGTTGCTGTTCGCGTTTGCGGGCTTTGGCGCGTGCAATAGCCGCTTCTACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCGGGTTGCTGTTCCCGTTTGCGCGCTTTg                                                                                                                              <  4:972184/151‑1 (MQ=25)
                          aaCCTGTGCTTCTGGGTCCGCATTAGCCTGGTGCTGGTCCCGCTTTCGGGCCTTGGCGCGGGCAATAGCCGCGTCTACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTg                                                                                                                              <  2:310569/151‑1 (MQ=21)
                           aCCTGTTGTTCTTGTTCGGGATTAGCCTTTTGCTGTTCGAGGTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCTACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTgg                                                                                                                             <  3:2058178/151‑1 (MQ=25)
                               gttgttCTGGTTCGGCTTTAGGCTGTTGCTGTTCGAGCTTGCGTGCTTTGGCGCGTGGAATTGCGGCGTCGACTGGAGCTTTGCGGGGATGTAGCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTgggt                                                                                                                           <  6:1035523/149‑3 (MQ=255)
                               gTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCt                                                                                                                           <  3:1754908/149‑1 (MQ=255)
                                ttcttcTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCCGCTTTGCGCGGATCCACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGAGCTTTGGCTCgg                                                                                                                        >  5:2190465/1‑151 (MQ=255)
                                  gttctGGTACCTCATTAGCCTGTTGCTGGTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCTACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGc                                                                                                                      <  4:35346/150‑1 (MQ=255)
                                   ttctGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTTGATTGGATCATCCAATAGAAGCGTCAAAGTCAGATTTGCTCGGAACAACCTGTTCTTCTGCCTAGGAATTAGAATGTTGCTGTTCCCGGTTGCGGGGGTTGGCTgggggt                                                                                                                     >  2:1643640/1‑149 (MQ=9)
                                    tctGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCGTTGGCGAGAGCAATAGCCTCTTCGACGGCCGCTTTGCGCGGATCCCCCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGGTTGCGGGCGTTGGGTCGGGcgc                                                                                                                    >  7:594054/1‑149 (MQ=17)
                                    tctGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGGGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCa                                                                                                                     <  5:404408/150‑1 (MQ=255)
                                    tctGGGACCGCATTAGCCTGTTGCTGGGCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTGCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGc                                                                                                                      <  4:1818598/149‑1 (MQ=255)
                                       ggTACCTCATTAGCCTGTTGCTGTTCGAGCTTGCGTGCTTTTGCGCGTGCAATAGCCGCTTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAg                                                                                                                 <  2:1755644/151‑1 (MQ=255)
                                       ggTACCGCATTAGCCTGCTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAg                                                                                                                 <  7:1890440/151‑1 (MQ=255)
                                       ggTACCGCATGAGCCTGTTGCTGTTCCAGCTTGCGTGCGTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAAt                                                                                                                   <  7:140773/149‑1 (MQ=255)
                                        gTACCGCATCAGCCTGCTGCTGGTCCAGCTTGCGTGCCTTGGCGCGTGCAATAGCCGCTTCGACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGc                                                                                                                <  2:823982/151‑1 (MQ=255)
                                         gaCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCg                                                                                                               <  7:499963/150‑1 (MQ=255)
                                          aCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCgg                                                                                                              <  8:1925104/151‑1 (MQ=255)
                                           ccGCTTTAGCCTGGTGCTGGGCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTGCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGc                                                                                                             <  4:769355/151‑1 (MQ=255)
                                              cATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTc                                                                                                          <  1:1860997/151‑1 (MQ=255)
                                              cATTAGCCTGCTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTc                                                                                                          <  8:568330/151‑1 (MQ=255)
                                               aTTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCTCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCg                                                                                                         <  2:664246/151‑1 (MQ=255)
                                                 tAGCCTGGTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGa                                                                                                        <  1:1483698/150‑1 (MQ=255)
                                                  aGCCTTTTGCTGTTCGTGCTTGCTTGCTTTTGCGCGTGCAATAGCCGCTTCTACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAcg                                                                                                      <  4:1031881/151‑1 (MQ=17)
                                                  aGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCGGAGTCGGCGGGAGCTTGGGGGTGGTCAAGCTGTTCTTCTGGGTGGGAGTTAGCCGGTTGCTGATCCTGATTGAGAGCTTTGGCTGGGGCAAttggggggtggggg                                                                                                      >  8:1145052/1‑138 (MQ=9)
                                                  aGCCTGCTGCTGGTCCAGCTTGCGTGCTTTTGCGCGTGCAATAGCCGCGTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAcg                                                                                                      <  4:440781/151‑1 (MQ=255)
                                                   gCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAcg‑g                                                                                                    <  7:1248656/151‑1 (MQ=255)
                                                    ccTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCGGCTTTGCGGGGATAGAGCAGTGGTGGTGGCTCCCCAGAATAATGGTGCTGTTCCCGTTTGCGCTCTTTGTGACGTGCAATAGCGGCTTCGAcg‑gg                                                                                                   >  1:892081/1‑150 (MQ=2)
                                                       ggtGCTGTTCCCGCTTGCGTGCGTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAcg‑gcg                                                                                                  <  6:1898078/147‑1 (MQ=255)
                                                       ggtGCTGTGCCAGCTTGCGGGCCTTCGCGCGTGCAATAGCCGCGTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGGTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACg‑gcggc                                                                                                <  5:1167213/149‑1 (MQ=17)
                                                        gtGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACG‑GCGGCt                                                                                               <  5:826486/150‑1 (MQ=255)
                                                          gCTGTTCGTGGTTGCGTGCTTTTGCGCGTGCAATAGCCGCTGCTACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACG‑GCGGCttt                                                                                             <  4:625059/151‑1 (MQ=17)
                                                          gCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACG‑GCGGCttt                                                                                             <  7:460565/151‑1 (MQ=255)
                                                             gTTCCTGCTTGCGTGCGTGGGCGCGGGCAATAGCCGCTTCGACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACG‑GCGGCTTTgc                                                                                           <  1:2066224/150‑1 (MQ=255)
                                                             gTTCCCGCTTGTGTGCTTTTGTGCGGGCAATAGCCGCTTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACG‑GCTGCTTTgcg                                                                                          <  6:118129/151‑1 (MQ=17)
                                                                cccgCTTGCGTGCTTTTGCTCTTTCAATAGCCGCCTCGACGGCAGATCTGCTCTGATCAACATGCTCTTCTCGTTCCGGACTCGCCTGCTCCCTTTCCAGCTTGCGCGCTTTGGCTCGTGCAATAGCGGCTTCGACG‑GCGGCTTTgcgc                                                                                         <  2:1917237/146‑1 (MQ=2)
                                                                ccAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACG‑GCGGCTTTGCGCgg                                                                                       <  3:1124898/151‑1 (MQ=255)
                                                                 ccggttgattGCTTTCGCGCGGGCAATAGCGGCGTGGACGGAAGCTTTGCGCGGATCAACGTGTTCTTCTGGGTCCGCATTAGCCGGTTGCTGTTCCGGTTTGCGGGCTTTGGATCGGGGAATAGCGGCTTCGACG‑GGGGCTTTGCGCGGa                                                                                      <  6:2094631/142‑1 (MQ=255)
                                                                 cAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCGACCTGTTCTTCTGGATCCGCATTAGCAGGTTGCTGTTCACGATTGCGAGCTTTGGCTCGGGCAATAGCGGCTTCGACG‑GCGGATTTGCACgg                                                                                       >  6:272809/1‑150 (MQ=14)
                                                                  ggCTTGCGTGCTTGCGCGCGGGCAATAGCCGCTTCCACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGGTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACG‑GCGGCTTTGCGCGGAt                                                                                     <  5:2020983/150‑1 (MQ=14)
                                                                  cggttgcttgcCTTTGCGCGTGCAATAGCCGCGGCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACG‑GCGGCTTTGCGCGGAt                                                                                     <  8:2282038/148‑1 (MQ=17)
                                                                  cggttGCGTGCTTTGGCGCGTGCAATAGCCGCTGCGACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACG‑GCGGCTTTGCGCGGAt                                                                                     <  7:292473/148‑1 (MQ=255)
                                                                  cggttGCGTGCGTTGGCGCGTGCAATAGCCGCTGCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTCCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACG‑GCGGCTTTGCGCGGAt                                                                                     <  4:1726827/148‑1 (MQ=17)
                                                                  cgCTTGCGGGCTTTGGCGCGTGCAATAGCCGCGTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACG‑GCGGCTTTGCGCGGac                                                                                     <  1:594778/150‑2 (MQ=255)
                                                                   gcttttttGCCTTGGCGCGTGCAATAGCCGCGTCGACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGTTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACG‑GCGGCTTTGCGCGGAt                                                                                     <  2:2268228/143‑1 (MQ=17)
                                                                   gCTTGCGGGCGTGGGCGCGTGCAATAGCCGCGGCTACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACG‑GCGGCTTTGCGCGGATc                                                                                    <  5:1528272/151‑1 (MQ=17)
                                                                   cgttgcttgcTTTCGCGCGTGCAATAGCCGCTGCTACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACG‑GCGGCTTTGCGCGGATc                                                                                    <  2:988006/149‑1 (MQ=255)
                                                                          tGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCATCTTAGCGCGGATCAACATGTTCTTCTGGCTCCGCAATAGCCTGTTGCTGTTCCAGATTGAGAGCTTTGGCACGGGCAATAGCGGCTTCGACG‑GCGGCTTTggggcgtggtggatgg                                                                             >  4:1350291/1‑136 (MQ=11)
                                                                            ccttcgcgcGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACG‑GCGGCTTTGCGCGGATCGACCtgttg                                                                           <  1:1036887/146‑1 (MQ=255)
                                                                             gttGGCGCGTGCAATAGCCGCGGCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCGTTGGCTCGGGCAATAGCGGCTTCGACG‑GCGGCTTTGCGCGGATCGACCtgttgt                                                                          <  5:244286/150‑1 (MQ=255)
                                                                              ttGGCGCGTGCAATAGCCGCGTCGACGGCAGCCTTGCGCGGAGCAACCCGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACG‑GCGGCTTTGCGCGGATCGACCtgttg                                                                           <  7:1933767/149‑1 (MQ=255)
                                                                               gagcgcGTGCAATAGCCGCTTCTACGGCAGCTTTGCGCTGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACG‑GCGGCTTTGCGCGGATCGACCTgttgtt                                                                         <  2:1001837/148‑1 (MQ=255)
                                                                                    cgTGCAATAGCGGCTTCGAGGGCAGGCTGACGCGGTGGAAGCCGATCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCAGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACG‑GCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCt                                                                   <  3:1634301/151‑1 (MQ=14)
                                                                                      ggCAATAGCCGCTGCTACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACG‑GCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCg                                                                 <  3:191827/150‑1 (MQ=255)
                                                                                        cAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACG‑GCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGc                                                               <  3:333842/151‑1 (MQ=255)
                                                                                        cAATAGCCGCGTCTACTGCAGCGTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACG‑GCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGc                                                               <  1:323917/151‑1 (MQ=255)
                                                                                         aaTAGCCGCGTCTACTGCAGCTTTGCGCGGATCTACCTGGTCTTCTGGCTCCGGATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCGTCGACG‑GCCGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCa                                                              <  7:755342/151‑1 (MQ=14)
                                                                                          aTAGCCGCTTCTACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACG‑GCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCAt                                                             <  1:128054/151‑1 (MQ=255)
                                                                                           tAGCCGCTTCGACGGCAGCTTTGCGCGGATCGACCTGTTCTACATGGTAAGCCATACCAGGTTGGTATTCCAGTTTTCGCCGTTTGGCAAGGGCAATGGCGCCTTATCCG‑TAAGAATAGCGCGGATCGGCCtgttgtggaggggcggcggg                                                            >  4:930546/1‑137 (MQ=2)
                                                                                            aGCCGCTTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTTGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACG‑GCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTa                                                           <  6:1678773/151‑1 (MQ=255)
                                                                                              cctgttCTACTGCAGCTTTTTGCGTATCAACCTGTTCTTCTGGCTCGTCATTATCCTGTTGCTGTTCGCGTTTTCTGGCTTTGGCTCGGGCAATAGCGGCTTCTACG‑GCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGc                                                         <  6:1470424/147‑1 (MQ=14)
                                                                                               cGCTTCGACGGCAGCTTTGCGCGGATCGACCTGTTCTTATGGCTCCGCATTAGCCGGGTGCTCTTCACGGTTTCGAGCGGTGGGGCGGGCAATAGCGGCTTCGACG‑GCGGCTTTGCGCGGCTCGCGCGGTTGTTCGGGcgggggcggggcg                                                        >  1:1764638/1‑139 (MQ=2)
                                                                                               cGCTTCCACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCGCCGCATTAGCCTGGTGCTGTTCCCGTTTGCGGGCTTTGGCTCGGGCAATAGCGGCTTCGACG‑GCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGcc                                                        <  3:823044/151‑1 (MQ=255)
                                                                                                 gtgcaaCGGCAGAGTTGCGCTGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGGTGCTGGGCCCGTTTGCTCGCCTGTGCGCGGGCAATAGCGGCTGCGACG‑GCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTg                                                      <  2:2090367/146‑1 (MQ=14)
                                                                                                     gACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCAGATTGCGCGCTATGTCTCAGGCTATAGCGGCTTC‑ACGCGAGGCAGTCAGCCGCAGGGCCTGTTGTTCTGGCTCGGCATTaaactctagc                                                  >  5:469164/1‑142 (MQ=2)
                                                                                                      actgccgCTTTGCGCTGAGGAACCTGCTCTTCTGGCTCCGCATTAGCCTGGTGCTGTTCGCGTTTGCGGGCTTTCGCTCGGGCAATAGCCGCTTCTACG‑GCCGCTTTGCGCGGATCCACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCt                                                 <  6:1015490/145‑1 (MQ=255)
                                                                                                           ccccttccgcgCATCCACCTGTTCTTCTGGCTTTTTATTATTGTTTTGCTGTTCAAGTTTTTGTTCTTTGGCTATGTCAATATTTGCTTAGACG‑TCGGTGTTGCGATGTTCTACCTGTTGTTCTGGCTCCGCATTAGCCTGTTGCTGTTcc                                            <  8:611209/144‑1 (MQ=2)
                                                                                                            gCTTTGGGCTGAGCTACCTGTTCTTCTGGCTCGGCATTAGCCTGTTGCTGTTCGCGTTTGCGCGCTTTTGCGCGGGCAATAGCCGCTTCTACG‑GCCGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCa                                           <  8:1312663/151‑1 (MQ=14)
                                                                                                                 gcgcGGAGCTACGTGCTCTTCGGGCTCCGCTACAGCCGGGTGCTGGTCGCGTTTTCTCGCGTGGGCGCGGGCAATAGCCGCTTCTACT‑GCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCtt                                       <  3:1818619/150‑1 (MQ=14)
                                                                                                                  cgcgGACCAACCGCTTCATCTGCGTCCGCCTTACGGGGTTGGTGTTCCCCCGTGGGCTCTTCGGCTCGTGCAATAGCGGCTTCGACG‑GCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTg                                      <  1:2224983/150‑1 (MQ=14)
                                                                                                                    gtgtggtaagtggtgttctGGCTCCGCATAATCCTGGTGCTGGTCCGGTTTGCGGGCGTTGGCTCGGGCAATAGCGGCTTCTACG‑GCCGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGt                                   <  7:1328223/136‑1 (MQ=14)
                                                                                                                    cgGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTACTGTTCAAGATAGCGCGGATTGGCTCGGGAAAAAAATGCTTCGACG‑GCGTCTTTGCGCGGATCGACAAGTAGTTCTGGGTCCGCATTAGCCTGTTGGTgcggcagcgggcgg                                   >  5:170539/1‑138 (MQ=9)
                                                                                                                       agccaccaggtcttcgGCCTCCGCATTAGCCGGGTGCTGGGCCCGTTTGCTCGCGTTCGCGCGGGCAATAGCGGCGTCTACG‑GCCGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCt                                <  1:1126936/141‑1 (MQ=14)
                                                                                                                           aCCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTc                                                                                                          >  7:316670/1‑74 (MQ=255)
                                                                                                                            actcttcttcTCGCTAGTCATTACCCGGTTCCTCTTCTCTTTTGCTAGAGTAGGCTCTTGCTATCTCGGCTTCGACG‑GCTGCTTTGCGCGGATCGACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTgg                            <  8:675790/146‑1 (MQ=2)
                                                                                                                             gtGTTCATCTGGCTCCGCCTTACCCGGATGCGGTTACGGGTCGGGAGCTGAGCCGCGTGCTCTAGCGCGGTCTACT‑GCCGCTTTGCGCGGATCCACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCa                          <  3:414580/150‑1 (MQ=9)
                                                                                                                                   ttctGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACG‑GAGGCGATGGGGGGATCGCCCTCTGGTTATGGCTCCGCATTAGCCGGATGCTGTTCGAGCTTGCGTGCTTTGGCGCGGGcg                    >  5:272706/1‑150 (MQ=255)
                                                                                                                                      gggCTCCGGATGATCCTGGTGCTGGGCCGGTTTTCTGGCTTTCGCGCGGGCAATAGCGGCGTCGACG‑GCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATa                 <  3:1441334/150‑1 (MQ=14)
                                                                                                                                      gggCTCCGCATGAGCCTGGTGCTGGGCCCGTTTGCGCGCGTTCGCGCGGGCAATAGCGGCTTCGACT‑GCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATa                 <  5:364984/150‑1 (MQ=14)
                                                                                                                                       ggCTCCGCAGTAGCCGGGTGCTGGGCCCGTTTGCGCGCGTTGGCGCGGGCAATAGCGGCTTCGACG‑GCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAg                <  5:668087/151‑1 (MQ=17)
                                                                                                                                        cctggccttgaGCCGGGTGCTGTTCCCCTCTGGGGGCGTGCGCGCGGGCAATAGCGGCTGCTACT‑GCCGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGc               <  3:5975/141‑1 (MQ=14)
                                                                                                                                           ccGTATTATCCTGTTGCTGTTCCGGTTTGCTGGCTTTGGCGCGGGCAATAGCGGCTTCCACG‑GCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCg              <  3:75368/149‑1 (MQ=14)
                                                                                                                                            cGCATTAGCGGGGTGCTGTTCCTGTTCGCGCTCGTTGGGGTTGGGATTAGCGGCGGCTACT‑GCCGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCt           <  6:71793/151‑1 (MQ=14)
                                                                                                                                             gCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCTGCTTCAACG‑GCAGATTTACGAGGATCAGCAAATATATCTAGATCGTCATTATCCTATTGCTGTTCAAGCTAGCTGGATTTGTCTCTGGAAATAgattctt          >  8:837387/1‑145 (MQ=255)
                                                                                                                                               aTTAGCCGGTTGCTGTTCCCGGTTGCGAGCTATGGATCGCGCAATACAGGAGTCGACT‑GCGGCTTTCCGCGGATCGAAGTGGTGTTCTGGGTCGGCAATAGCCTGTTGCGGTTGCAGCTTGCGGGCTGGGGCGCggggagtgcgggcgtgg        >  5:185257/1‑137 (MQ=255)
                                                                                                                                                      ggTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCTACG‑GCGGATTTACGAGGATCAACAACTTTATCTCGGAAGACATTAGACTATTGAAGTACAAGCTTGCGATCTTTTGATCTGGGTATAGCGGCTTccaattaa  >  8:397384/1‑143 (MQ=255)
                                                                                                                                                      |                                                                                                                                                      
GCGGCAACTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACG‑GCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCG  >  DH1/2169398‑2169697

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑