Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | DH1 | 3,184,318 | 0 | T | A | 22.8% | 406.5 / 68.0 | 206 | noncoding (30/75 nt) | ECDH1_RS15785 | tRNA‑Gln |
Reads supporting (aligned to +/- strand): ref base T (49/103); new base A (25/20); total (83/123) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 8.06e-03 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 213 total aligned reads displayed.
GCGTTGTACGGATGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCTTCTTCGAGTAAGCGGTTCACCGCCCGGTTATTGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCACAGGTTCGAATCCCGTCGTAGCCACCAAATTCTGAATGT > DH1/3184168‑3184467 | gCGTTGTACGGCGGGCGTAGCGCCAAGAGGTCAGGCCCCGGCTCTTGATAGCGGCATTGCCTGCAGCGAATCCAGGTACACGATCCAGGATCTACGACTACCCGCGTCACCGGGGGGCTCTTGGGGTATCGCCAAGCGGTAAGGCACCGGt < 1:789055/151‑1 (MQ=255) tGTACGTTTGGGGGATCGCCAACCGGTAAGGCACCGGCTTATGATACCGGCCTTCCCTGGAGCGAATCCAGGTACACGAGCGATCTCCTTCGACTAAGCGCGTCACCGCCCGCGTCTTGGGGTATCGCCAAGCGGTAAGGCACCGGtttt < 5:1310632/150‑1 (MQ=255) gTACTGATGGGGGAGCGCCAAGCTGTAAGGCAGCGGTTGTTGAAACCGGCAGTCCCTGGTTCGTATCGAGGTACCCCAGCCATCTTCTTCGACTAAGCGGGTCACCGCCCGCCTATTGGGGTATCGCCAAGCGGTAAGGCACCGGttttt < 5:507914/150‑1 (MQ=255) gTACGGATGGGGTATCGCCAAGCTGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGTTTCGAATCCAGGTACCCCAGCCATCTTCCTCGAGTAAGCGGTTCACCGCCCGGTTATTGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTg < 4:760959/151‑1 (MQ=255) ggggTATCGCCCAGCGGTAAGGCAGCGGGTTTTGATACCGGCCTTCCCTGGTTCGAATCCAGGTACCCCAGCCATCTTCTTCGAGTAAGCGTTTCACCGCCCGGTTATTGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGc < 7:831981/151‑1 (MQ=255) ggggTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCTTCTTCGAGTAAGCGGTTCACCGCCCGGTTATTGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCgg < 7:119525/150‑1 (MQ=255) ggggTAGCGGCAAACTGTCAGGAACCTGGTTTTGATACGGCGCTGCCCTGATTCTGTTCCAGGTACCGGATGCATGTGCTTCGAATAAGCGGTTCACGGCCCTGTGCTTGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCgg < 1:478886/150‑1 (MQ=12) cGGTAAGGCACCGGTTTTTGATACCGGCATTCACTCGATCGAATCGCGGTACCCCAGCCATCTTCGGCGAGTAAGGGGTTCCGAGCCCGGTTATTTAGTAATCGGCCAGCGGTACGGCGGGGGTTTCTGATGCCGGccgggcggcgggcgc > 3:182751/1‑137 (MQ=9) tttttGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCTTCTTCGAGTAATCGGTTCACCGCACGGTTATTGGGGTATCGCCAAGCGGTAAGGACCGGGGTATTGATCCCGTCCGTCCCTCGGTCgcaaagacggaacgc > 1:1135618/1‑136 (MQ=21) tgatccctcccggcccGGGATCGAATCCAGGTCCCCCCGCCAGCAGCTTCGACTTCCCGCTTCACCGGCCGGGTAATGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGcc < 1:1893048/137‑1 (MQ=9) aCCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCTTCTTCGAGTAAGCGGTTCACCGCCCGGTTATTGGGGTATCGCCAAGCGGTAAGGCACCGGGTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCg > 7:894378/1‑150 (MQ=255) gCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCTTCTTCGAGTAAGCGGTTCACCGCCCGGTTATTGGGGTATCGCCAAGCGGTAAGGCCCCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCgaaga > 3:1886818/1‑150 (MQ=255) aTTCCCTGGTTCGAATCCAGGTACCCCAGCCATCTTATTCGAGTAAGCGGTTCACCGCCCGGTTATTGGGGTATCGGCAAGCGTTAAGGGACCGGAAGAGGATACCCGCCTTCCCAGGGACGCAGCCAGGTACCGCCGCCAtgttattaa > 5:1613715/1‑142 (MQ=255) tGGTTCGAATCCAGGTACCCCAGCCATCTTCTACGAGTAAGCGGTTCACCGCCCGGTTATTTGGGTATCGCCAAGCCGTAAGGCACCGGATAATGATACCGGCATTCCCTGGTTCCCATCCAGGTACCCCAGCCATCGAGGTAACAAtatt > 7:495372/1‑148 (MQ=255) ggTTCGAATCCAGGTACCCCAGCCATCTTCTTCGAGTAAGCGGTTCACCGCCCGGTTATTGGGGTATCGCCAAGCGGTAAGCCCCCGGGAAGTGTTACCGGCATTCCCTGGTTCGCATCCTCGTACCCGAGCGATGGTAGAAAAAAACttc > 5:912546/1‑149 (MQ=25) tCGAATCCAGGTACCCCAGCCATCTTCTTCGAGTAAGCGGTTCACCGCCCGGTTATTGGGGTATCGCCAAGCGGTAAGGCACCGGATTGTGATTCCGGCATTCCGAGGTTCGAATcctc > 7:1738333/1‑117 (MQ=21) gAATCCAGGTACCCCAGCCATCTTCTTCGAGTAAGCGGTTCACCGCCCGGTTATTGGGGTATCGCCAAGCGGTAAGACAGCGGAAGATGAGACCTCCAATCACTAGTGACAAAACAGGAACCCCAGCCATCGAATAACCAATATgccaaac > 5:335549/1‑145 (MQ=255) gAATCCAGGTACCCCAGCCATCTAATTAGAGTAATCGGTTCAACGCCCCGTTATTTGGCTATCGCCAAGCTGTAAGGAACCGGATGTTGATACCCTCATTACCTAGTTCCAATCCAGGTAACCCCGCCATCGAAGAAACAAAATGGCTACg > 5:2047880/1‑151 (MQ=255) aaTCCAGGTACCCCAGCCATCTTCTTCGAGTAAGCGGTTCACCGCCCGGTTATTGGGGTATCGCCAAGCGGTAAGGCACCGGATTATGATACCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCaa > 2:1129570/1‑128 (MQ=18) aaTCCAGGTACCCCAGCCATCGACGACGAGTACGCGGTACACCGCGCGGTTATTGGGGGAACGCCAAGCGGTAAGCCACCGGGAGTTGATACCGGCCTTACGTCGTGCGCAACAACGTACACCAGCCAACAAAGAAACAAACTgcataac > 2:94718/1‑144 (MQ=255) tCCATGTACCGCAGCCATCTTATTAGAGTAAGATTTTCAAATCCAGTTTATTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCaatttattca < 8:2261641/135‑10 (MQ=14) aGGTACCCCAGCCATCTTCTTCGAGTAAGCGGTTCACCGCCCGGTTATTGGGGTATCGCCAAGCGGTAAGGCACCGGATTTTGATTCCGGCATTCCGAGGtt > 3:1198052/1‑102 (MQ=25) cccAGCCATCTTCTTCGAGTAAGCGGTTCACCGCCCGGTTATTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATACCGGCATTCCGAGGTTCGAATCCACGTACCCCAGc > 2:2016818/1‑115 (MQ=18) tccATCTTCTTCGAGTAAGCGGTTCACCGCCCGGTTATTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTccgag < 2:1164006/88‑4 (MQ=18) gCCATCTTCTTCGAGTAAGCGGTTCACCGCCCGGTTATTGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCa > 3:633640/1‑113 (MQ=18) ccATCTTCTTCGAGTAAGCGGTTCACCGCCCGGTTATTGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGtt > 6:2059119/1‑148 (MQ=255) ccATCTTCTTCGAGTAAGCGGTTCACCGCCCGGTTATTGGGGTATCGCCAAGCGGTAAGGCACCGGATTATGATTCCGGCATTCCGAGGTTCGAATcctcg > 1:1369243/1‑98 (MQ=17) cttcGAGTAAGCGGTTCACCGCCCGGTTATTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCaatttat < 7:2087354/111‑7 (MQ=11) cGAGTATGCGGTTCACCGCCAGGTTATTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCgg < 4:1359167/69‑1 (MQ=17) cGAGTAAGCGGTTCACCGCCCGGTTATTGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCGTGGTTCGAATcctc > 1:1536566/1‑88 (MQ=255) gAGTAAGCGGTTCACCGCCCGGTTATTGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTc > 6:2272538/1‑151 (MQ=255) gAGTAAGCGGTTCACCGCCCGGTTATTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTccgag > 6:2063768/1‑74 (MQ=17) aGTAAGCGGTTCACCGCCCGGTTATTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCgg > 1:1950275/1‑67 (MQ=18) tAAGCGGTTCACCGCCCGGTTATTGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATTCCGGCATTCCGTGGTTCGAATCCTCGTACCCCAGCCaat > 7:745544/1‑98 (MQ=17) tAAGCGGTTCACCGCCCGGTTATTGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCTAGTTCGGAAGAGATCGCGGATGCACTCTCGGGACGTAGGTCCGTGGGTTAGAGCCCCTGACTCAt > 7:124513/1‑150 (MQ=12) tAAGCGGTTCACCGCCCGGTTATTGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCAt > 4:304309/1‑150 (MQ=255) tAAGCGGTTCACCGCCCGGTTATTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTccgagg < 2:1306820/75‑5 (MQ=14) tAAGCGGTTCACCGCCCGGTTATTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCaat < 8:744045/100‑3 (MQ=11) gTTCACCGCCCGGTTATTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCAt > 1:1163319/1‑62 (MQ=14) tCACCGCCCGGTTATTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCAt < 1:990084/60‑1 (MQ=14) aagcgatgttcgtatGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATgggg < 6:1096508/137‑1 (MQ=255) atagacgtggtttttgggTTTTGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGt < 4:474790/136‑1 (MQ=25) gcgttgttgtgttGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTc < 4:849897/140‑1 (MQ=255) gcgttgttagtttGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTc < 8:694257/140‑1 (MQ=255) ccGCCCGGTTATTGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTc > 4:2145492/1‑151 (MQ=255) cgttgtacttatGGTGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTca < 4:1565327/140‑1 (MQ=255) cgcggttgttatGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTca < 3:1703736/140‑1 (MQ=255) caggcggcatGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTcaca < 5:185238/142‑1 (MQ=255) ggttcgtttGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCACAg < 7:2234270/144‑1 (MQ=255) ggtccggatGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCACAg < 6:1429169/143‑1 (MQ=255) gtaggcatGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCACAgg < 1:1991803/144‑1 (MQ=255) tctgttGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCACAgat < 2:1799735/146‑3 (MQ=255) actgatGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCACAGGtt < 3:227057/146‑1 (MQ=255) cggatGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCACAGGtt < 4:830538/146‑1 (MQ=255) ggatGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCACAGGTTc < 4:992673/147‑1 (MQ=255) tatGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCACAGGtt < 4:1745010/146‑1 (MQ=255) gttGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCACAGGTTCg < 1:1431812/149‑1 (MQ=255) gatGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAGAAATCTCGCTACCGAGCGCCGTTGGTGAGATAACCTCACTCAGAATGATCGGGGCACAGGATCg > 7:1389919/3‑150 (MQ=17) tGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCTAATAAACAAACTCGCTACGAAGCGCAGTTGTTTAGAGATCATCACTCATTATGAGGCCGTCAAAGGATCGagt > 6:1725294/1‑149 (MQ=17) ggggTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCACAGGTTCGAATc < 6:683423/151‑1 (MQ=255) gggTATCGCCAAGCTGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCACAGGTTCGAATcc < 2:632607/151‑1 (MQ=255) gTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCACAGGTTCGAATCCcg < 2:1486111/151‑1 (MQ=255) aTCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCACAGGTTCGAATCCcgtc < 2:1670722/151‑1 (MQ=255) aTCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCACAGGTTCGAATCCcgtc < 4:1089295/151‑1 (MQ=255) aTCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCACAGGTTCGAATCCcgt < 3:867301/150‑1 (MQ=255) tCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTCGCTACGTCGCGCAGTTGGTTAGGGCACAt > 1:111413/1‑113 (MQ=255) cGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCACAGGTTc < 6:1642084/139‑1 (MQ=255) cGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCACAGGTTCGAATCCcgtcg < 4:182249/150‑1 (MQ=255) gCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCACAGGTTCGAATCCCGTCGTa < 6:1160766/151‑1 (MQ=255) ccAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTTCGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCACAGGTTCGAATCCCGTCGTAg < 3:2021301/151‑1 (MQ=255) cAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCACAGGTTCGAATCCCGTCGTAGc < 3:762777/151‑1 (MQ=255) cAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCACAGGTTCGAATCCCGTCGTAGc < 8:1709686/151‑1 (MQ=255) aaGCGGTAAGGGACGGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTGAGTTGGTTAGAGCTCATCACTCATAATGATGGGGTCACAGGTTCGAATCCCGTCGTAggc < 1:1040958/151‑3 (MQ=255) aaGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCACAGGTTCGAATCCCGTCGTAGcc < 6:805185/151‑1 (MQ=255) aaGCGGTAAGGCACCGGTTTTTGATAACGTCATAACATGGTTCGAATCCAGGTACCCCAGCGATCGAAGAAACAATATGGCTACGTAGCTAAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCACAGGTTCGCATCCCGTCGTAGcc > 2:738188/1‑151 (MQ=21) aGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCACAGGTTCGAATCCCGTCGTAGcca < 8:1967826/151‑1 (MQ=255) aGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCACAGGTTCGAATCCCGTCGTAGcca < 7:694608/151‑1 (MQ=255) aGCGGTAAGGCACCGGTTTTTGATACAGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCTAATACACCAACTCGCTACTAAGCTCAGTTAGTGAGAGCACAACAATCATAATGATAGCGTGAAAGGATAGAATcaagacctagct > 6:1842618/1‑139 (MQ=9) cttaagttctcGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCACAGGTTCGAATCCCGTCGTAGccac < 8:1315110/139‑1 (MQ=255) gTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCTAAGAAACAAAATCGCTACGAAGCGCAGTTATTTAGAGAACATCACTCATAATGAAGCCGTCTAAGGTTCGACTccatacgtgggcagca > 5:2259569/1‑136 (MQ=12) gTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTTGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCACAGGTTCGAATCCCGTCGTAGCCACCaa < 2:309130/151‑1 (MQ=255) gTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCACAGGTTCGAATCCCGTCGTAGCCACCaa < 3:208855/151‑1 (MQ=255) gTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCACAGGTTCGAATCCCGTCGTAGCCACCaa < 3:151453/151‑1 (MQ=255) gTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCACAGGTTCGAATCCCGTCGTAGCCACCaa < 4:23118/151‑1 (MQ=255) aaGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCTTAGAAGCGATCTGGCTACGGATCGCTGTTGTTTAGCGCACGTCACTCTTAATGATGGGGGGACATGTTCGAATCACTTCGTAGCCACCAAAt > 1:2068629/1‑151 (MQ=18) aGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCGATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACAACACTCATAATGATGGGGTCACAGGTTCGAATCCCGTCGTAGCCACCAAAtt < 4:1025768/151‑1 (MQ=255) aGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCACAGGTTCGAATCCCGTCGTAGCCACCAAAtt < 2:572870/151‑1 (MQ=255) gCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCACAGGTTCGAATCCCGTCGTAGCCACCAAATTCt < 5:1690464/151‑1 (MQ=255) cACCGGTTTTTGATACCGGCATTCCGTGGTTCGAATCCAGGTACAACAGAAAACGAAGAAAAAATCTAGCAAAGTATATCAGTTGGTAAGAGAACCTCACACATAATTATGTTATAAAAGGTTAGAATCCCGTCGGAGCCCGCAAAGTCTg > 8:560993/1‑151 (MQ=12) aCCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCGGCCCTCGAAGAAACAATCTGGCTACGTAGCTGAGTTGGTTAGAGCACATCACTCATAATGATGGCGTCACAGGTTCGCATCCCGTCGTAGCCCCCCAATTCTgg > 1:1278289/1‑150 (MQ=25) aCCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCTAAGAAGAAAACTCGCTACGTAGCGCAGTTGGTTAGGGAACGGCACTCGTAATGAGGGGGTGAGATGTTCGACTCAGTACGTAGGCACCAAATTCtt > 5:1918349/1‑149 (MQ=12) aCCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAATAAACAATCAGGAGACTTAGCTGAGTAGGTTATAGCCGATCACGCATAATTAAGGGGTCCCAGGGTCGATGCCGGTCGTAGCGGGCATATTCTg > 1:295299/1‑150 (MQ=12) cGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCACAGGTTCGAATCCCGTCGTAGCCACCAAATTCTGAAt < 7:1800985/151‑1 (MQ=255) cGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCACAGGTTCGAATCCCGTCGTAGCCACCAAATTCTGAAt < 7:1418430/151‑1 (MQ=255) cGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCACAGGTTCGAATCCCGTCGTAGCCACCAAATTCTGAAt < 3:333137/151‑1 (MQ=255) cGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCACAGGTTCGAATCCCGTCGTAGCCACCAAATTCTGAAt < 6:1890928/151‑1 (MQ=255) ggTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGATAACATCACTCATAATGATGGGGTCACAGGATCGAATCCATACGTAGAGACCAAATACTGaagg > 2:1968643/1‑149 (MQ=25) ggTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCACAGGTTCGAATCCCGTCGTAGCCACCAAATTCTGAATg < 1:687798/151‑1 (MQ=255) gTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCACAGGTTCGAATCCCGTCGTAGCCACCAAATTCTGAATGt < 2:1088490/151‑1 (MQ=255) gTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCACAGGTTCGAATCCCGTCGTAGCCACCAAATTCTGAATGt < 3:1793063/151‑1 (MQ=255) | GCGTTGTACGGATGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCTTCTTCGAGTAAGCGGTTCACCGCCCGGTTATTGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCACAGGTTCGAATCCCGTCGTAGCCACCAAATTCTGAATGT > DH1/3184168‑3184467 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |