BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	DH1	= 2668875	347 (0.720)	179 (0.420)	124/268	6.3	38.9%	pseudogene (20/345 nt)	pinE	hypothetical protein
*	?	DH1	= 2670672	252 (0.590)	179 (0.420)	124/268	6.3	38.9%	coding (306/789 nt)	stfP	integrase
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 365 total aligned reads displayed.

GTTCAGCGCATTACGTTGTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGT  >  DH1/2668725‑2669025

gTTCAGCGCATTACGTTGTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGTAGAAgg                                                                                                                                                        >  5:456353/1‑151 (MQ=255)

gTTCAGCGCATTACGTTGTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAgg                                                                                                                                                        >  7:1687649/1‑151 (MQ=255)

gTTCAGCGCATTACGTTGTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAgg                                                                                                                                                        >  6:197552/1‑151 (MQ=255)

   cAGCGCATTACGTTGTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAg                                                                                                                                                      <  8:355748/150‑1 (MQ=255)

   cAGCGCATTACGTTGTAGATCTGTGTTCTCGACATTTGATGATACGACTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATATCTTCATTTTAATAAACGTAGGTTTCGGAGAACGat                                                                                                                                                      >  2:1596043/1‑149 (MQ=255)

    aGCGCATTACGTTGTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGc                                                                                                                                                     >  5:1618997/1‑150 (MQ=255)

      cgcATTACGTTGTAGATCTGTGTTCTGGTCATTTGTTGATACTCGTACATATCCAATAAGCATCTTATATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGTGAGAAGGAGCaaa                                                                                                                                                  <  5:394520/151‑1 (MQ=255)

      cgcATTACGTTGTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAggctctgc                                                                                                                                                  >  2:100042/1‑145 (MQ=255)

      cgcATTACGTTGTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCaa                                                                                                                                                   >  6:449867/1‑150 (MQ=255)

        cATTACGTTGTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAAc                                                                                                                                                <  1:422527/151‑1 (MQ=255)

         aTTACGTTGTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAggctctgcatt                                                                                                                                               <  1:756425/151‑10 (MQ=255)

         aTTACGTTGTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAggctctgcatt                                                                                                                                               >  7:1446783/1‑142 (MQ=255)

           tACGTTGTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTc                                                                                                                                              <  2:817069/150‑1 (MQ=255)

            aCGTTGTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAggctctgcattac                                                                                                                                             <  4:1529662/150‑12 (MQ=255)

              gTTGTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATg                                                                                                                                          >  1:589044/1‑151 (MQ=255)

                  tAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGAAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTAAATgcagc                                                                                                                                      >  1:158103/1‑151 (MQ=255)

                    gATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATgcagca                                                                                                                                     >  1:663994/1‑150 (MQ=255)

                         gtgtTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACgg                                                                                                                                 <  1:216534/149‑1 (MQ=255)

                         gtgtTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGc                                                                                                                                <  3:1278407/150‑1 (MQ=255)

                         gtgtTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCt                                                                                                                               >  3:509135/1‑151 (MQ=255)

                            ttgtGGTCATTTGTTGATAAGGGTACATAGCCAATAAGCATGTTAAATCCACCTGGTAAAAGCAGTAATGATTCCATTTGCTTGTTATTTCTTCATTTTCATAAACGGTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCt                                                                                                                               >  4:966185/4‑148 (MQ=255)

                              gtggggaTTTGTTGATACGCGTACATAGCCATTAAGCATGTTATATGCCCCTGGTAAAAGGTGGAATGATGCCATTTGCTTGTTATTTCTTGATTTTCATTATCGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACAtt                                                                                                                          <  2:1716187/145‑1 (MQ=255)

                                ggTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTa                                                                                                                         <  7:1815223/150‑1 (MQ=255)

                                 gTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAgg                                                                                                                       <  8:1283488/151‑1 (MQ=255)

                                   cATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGAc                                                                                                                     >  8:89419/1‑151 (MQ=255)

                                       tgttgATACGCGTACATAGCCAATAAGCATG‑TAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTTGGTGGTATTTGTTCATTTTGATTAACGTTGGTTTTGGTGAAGGAGCAAAACTGAATGCAGCAACGGCTACATTAGGACGCAcc                                                                                                                >  6:1711263/1‑151 (MQ=255)

                                                gcgTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGATTGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGAAGCAACGGCTACATTAGGACGCACCGGTTTCAt                                                                                                        >  1:1010994/1‑151 (MQ=255)

                                                 cgTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCAt                                                                                                        >  3:148970/1‑150 (MQ=255)

                                                  gTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAg                                                                                                      <  8:669493/151‑1 (MQ=255)

                                                   tACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGc                                                                                                     >  6:1647981/1‑151 (MQ=255)

                                                   tACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGc                                                                                                     >  4:1450501/1‑151 (MQ=255)

                                                      aTAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGC‑ACCGCTACATTATGACCCCCCGGGTTGATaccata                                                                                                  >  6:978246/1‑145 (MQ=255)

                                                        aGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATAc                                                                                                >  5:1491197/1‑151 (MQ=255)

                                                         gCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGGTTGTTATTTCTTCATTTTCATAAACGTTCGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATAcc                                                                                               >  4:1640693/1‑151 (MQ=255)

                                                          ccAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCg                                                                                              <  7:3441/151‑1 (MQ=255)

                                                          ccAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCg                                                                                              <  1:91969/151‑1 (MQ=255)

                                                           cAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAGAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCgg                                                                                             >  5:1473989/1‑151 (MQ=255)

                                                            aaTAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGt                                                                                            <  7:1283441/151‑1 (MQ=255)

                                                             aTAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGtt                                                                                           <  1:1247794/151‑1 (MQ=255)

                                                             aTAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGtt                                                                                           >  4:439405/1‑151 (MQ=255)

                                                             aTAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGtt                                                                                           >  3:1808456/1‑151 (MQ=255)

                                                               aaGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTAt                                                                                         <  5:1786198/151‑1 (MQ=255)

                                                               aaGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTAt                                                                                         >  1:1766995/1‑151 (MQ=255)

                                                                  cATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGAt                                                                                      >  1:299842/1‑151 (MQ=255)

                                                                     gTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtg                                                                                    <  2:1502803/150‑1 (MQ=255)

                                                                      ttAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggt                                                                                  >  3:1671844/1‑151 (MQ=255)

                                                                        aaaTCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggtg                                                                                 <  8:480296/150‑1 (MQ=255)

                                                                         aaTCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTggtggt                                                                               <  4:1114232/151‑1 (MQ=255)

                                                                          aTCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTa                                                                              <  2:11575/151‑1 (MQ=255)

                                                                          aTCACCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGAAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGGTATGATTggtggt                                                                               >  8:1005189/1‑150 (MQ=255)

                                                                           tCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTAt                                                                             >  8:1672020/1‑151 (MQ=255)

                                                                              cccTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTg                                                                           >  7:515980/1‑150 (MQ=255)

                                                                               ccTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTg                                                                           >  3:632509/1‑149 (MQ=255)

                                                                               ccTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTg                                                                           >  3:1083984/1‑149 (MQ=255)

                                                                                  ggTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCa                                                                       >  4:721048/1‑150 (MQ=255)

                                                                                    tAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCGTAGCTATACCGGTTATGATTGGTGGTATTGAGCAATc                                                                    >  3:337814/1‑151 (MQ=255)

                                                                                    tAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATc                                                                    >  2:487868/1‑151 (MQ=255)

                                                                                     aaaaGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATc                                                                    <  1:107305/150‑1 (MQ=255)

                                                                                         gCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTaa                                                               <  4:18031/151‑1 (MQ=255)

                                                                                          cAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAAt                                                              >  2:160510/1‑151 (MQ=255)

                                                                                           aGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGGTATGATTGGTGGTATTGAGCAATCAGTAATc                                                             >  4:645723/1‑151 (MQ=255)

                                                                                            ggAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCa                                                            <  7:706028/151‑1 (MQ=255)

                                                                                            ggAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCa                                                            <  2:248904/151‑1 (MQ=255)

                                                                                                 gatgCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAg                                                       <  1:808726/151‑1 (MQ=255)

                                                                                                   tgCCATTTGCTAGTTATTTCATCATTTTCATAAACGTTCGTTTCGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACCAACCCGATTCATAGCTATACCCGTAATGATAGGTGGTATTGAGCAATCACTAATCATTCac                                                       >  2:1284238/1‑148 (MQ=255)

                                                                                                     ccATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTggg                                                   <  3:432701/151‑1 (MQ=255)

                                                                                                     ccATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTggg                                                   <  4:1208504/151‑1 (MQ=255)

                                                                                                      cATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTgggg                                                  >  7:829767/1‑151 (MQ=255)

                                                                                                            cTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGa                                             >  5:1856393/1‑150 (MQ=255)

                                                                                                             ttGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAAt                                           >  5:135140/1‑151 (MQ=255)

                                                                                                              tGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGaa                                            <  1:1469083/149‑1 (MQ=255)

                                                                                                               gTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGc                                         >  8:250637/1‑151 (MQ=255)

                                                                                                                  aTTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCg                                       <  8:1549060/150‑1 (MQ=255)

                                                                                                                      cttcATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCaaa                                   >  6:287405/1‑150 (MQ=255)

                                                                                                                          aTTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGCGGTGGAATGCCGCAAAAGCAt                              >  3:754348/1‑151 (MQ=255)

                                                                                                                           ttttCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATc                             >  8:1180002/1‑151 (MQ=255)

                                                                                                                               cgaaaaCCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCt                            <  2:322576/145‑1 (MQ=255)

                                                                                                                                gaaaaCCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCct                        <  8:1831027/149‑1 (MQ=255)

                                                                                                                                aTAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCct                        >  5:5382/1‑151 (MQ=255)

                                                                                                                                   aaCGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTg                     >  7:1556393/1‑151 (MQ=255)

                                                                                                                                   aaCGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTg                     <  6:1055665/151‑1 (MQ=255)

                                                                                                                                   aaCCTTGGTTTGGGAGAAGGAGGAAATCTCAATGGAGCAACGGATACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCTTTCAGTGGGTGTGTAATGCCGCAAAAGCATCTGCCTCTg                     <  2:648237/151‑1 (MQ=255)

                                                                                                                                   aaCCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTg                     <  5:990688/151‑1 (MQ=255)

                                                                                                                                    accttGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTgg                    <  3:1398930/148‑1 (MQ=255)

                                                                                                                                    aCGTTGGTTTGGGAGAAGGAGCAAAACTCAATTCAGCAACGCCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTgg                    >  3:1862493/1‑151 (MQ=255)

                                                                                                                                    aCGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTgg                    <  3:16190/151‑1 (MQ=255)

                                                                                                                                     cGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTggg                   >  1:112003/1‑151 (MQ=255)

                                                                                                                                      gTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTgggg                  <  7:607377/151‑1 (MQ=255)

                                                                                                                                        tGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATAAAGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTggggtg                >  6:823034/1‑149 (MQ=255)

                                                                                                                                        gggTTTGGGAGAAGGAGCAAATCTCAATGCAGCAACGGGTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCAGCTGCCTCTgggggg                <  6:676907/150‑1 (MQ=255)

                                                                                                                                         ggTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTggggggg               <  6:345688/151‑1 (MQ=255)

                                                                                                                                         ggTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTgggggg                <  6:1473726/150‑1 (MQ=255)

                                                                                                                                         ggTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTgggggg                <  4:843430/150‑1 (MQ=255)

                                                                                                                                          gTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTCCCTCTggggggg               >  8:1096847/1‑150 (MQ=255)

                                                                                                                                            ttGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATg            >  6:1433840/1‑151 (MQ=255)

                                                                                                                                               ggAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCAGCCTCTGGGGGGGATGGaa         <  3:884095/151‑1 (MQ=255)

                                                                                                                                                 agaAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAAt       >  2:1089171/1‑151 (MQ=255)

                                                                                                                                                   aaGTAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCCCCGGTTTCATCGCTATCCCGGGTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAAGGCCGCAAAAGCAGCTGCCTCTGGGGGGGATGGAAATAc     <  8:853363/151‑1 (MQ=255)

                                                                                                                                                    ccgAGCAAAACTCACCGCAGCCACGTCTACACTAGGACGCACCGGTTTCATAGCTATACCTGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCACTGTGTGTGGAATGCCGCAAAACCATCTGCCTCTGGGGGGGATGGAAATACa    <  6:587153/149‑1 (MQ=255)

                                                                                                                                                     ggAGCAATACTCAATGCAGCAACGGCTACATTAGGTGGCAGCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGGGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACa    <  4:244678/150‑1 (MQ=255)

GTTCAGCGCATTACGTTGTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGT  >  DH1/2668725‑2669025

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.