Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*DH12,169,5480GT30.6% 439.4 / 84.7 270P671Q (CCG→CAG) rsxCelectron transporter RsxC
Reads supporting (aligned to +/- strand):  ref base G (44/142);  new base T (19/63);  total (65/205)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 271 total aligned reads displayed.

CGGCAACTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGA  >  DH1/2169399‑2169692
                                                                                                                                                     |                                                                                                                                                
 ggCAACTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGt                                                                                                                                                <  7:1415791/151‑1 (MQ=255)
        gCCGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGtt                                                                                                                                         <  5:1503399/151‑1 (MQ=255)
        gCCGCTTTGCGCGGATCAACCTGTTCTTCTGGGACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGtt                                                                                                                                         <  1:783336/151‑1 (MQ=255)
          cGCTTTGCGCGGATCAACCTGTTCTTCTGGTTCCGCATTAGCATATAGCAATACCATCTTGAATGGTTTGTCTCTTTAAATATCAGATTATAACGCTGCTTTGCGAGGATATAAATATAATTCTGGTTCCGCATTAGCAGGTGGgtgtagc                                                                                                                                       >  8:1647935/1‑148 (MQ=2)
           gcggtgggctgATCCACCTGTTCTTCTGGGACCGGATTAGCCTGTTGCTGGTCCGGCTTGCGGGCGTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTccc                                                                                                                                      <  4:1750550/141‑1 (MQ=25)
               tGCGCGGATCAAACTGTTCTTCTGGTACCGCATTAGCCTTTTGCTGTTCCAGCTTGCGTGCTTTCGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGtt                                                                                                                                   <  8:117687/150‑1 (MQ=255)
                gcgcTGATCTACCTGTTCTTATGGTACCGCATTAGCCTGTTGCTGTTCCTGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGttt                                                                                                                                  <  2:1617828/150‑1 (MQ=255)
                gcgcGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTg                                                                                                                                 <  7:1303254/151‑1 (MQ=255)
                gcgcGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTg                                                                                                                                 <  5:1177710/151‑1 (MQ=255)
                 cgcgGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAGCCTGGTCTTCTCGCTCCGAATTATCCGGTAGCTGTTCGCGATTgc                                                                                                                                >  3:296944/1‑151 (MQ=18)
                   gggATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCTTGCTTTGGCGCGTGCAATAGCCGCTGCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTgcgc                                                                                                                              <  3:1445987/150‑1 (MQ=255)
                   cgGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCCCGTGCAATAGACGCTTACACCGCTGCGTTGAGCGGATCTACCTGTTCTTCTGGATCGGCATTAGCCGGTTGCTGTTCGCGGGTgcgg                                                                                                                              >  7:687173/1‑150 (MQ=14)
                    ggaggaaCCTGTTCTTCTTGGACCGCAAGAGCCTGTTGCTGGGCGCGCGTGAGGGCTTGGGCGCGTGCAATAGCCGCGGCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGGTTgcgcg                                                                                                                             <  4:641245/146‑1 (MQ=18)
                      aTCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAACCTCTTATACGCCACGTTTGCGCAAATCAACGTTATCTTATTGAACATCAATAGCCTGTTGCTGttaaaaaaaaaaagct                                                                                                                           >  8:850647/1‑137 (MQ=9)
                        cAACCTTTTCTTCTGGTACCGTAGAAGACTCTCTCTGGACCAGCTTGCTTGCGTTCGCGCGTGCAATAGCCGCTTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCtt                                                                                                                          <  6:1224322/150‑1 (MQ=18)
                              gttgttATGGTACGGGATTAGCCTGTTGCTGTTCGTGGTTGCTTGCGTTGGCGCGTGCAATAGCCGCTTCTACTGGAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTc                                                                                                                    <  2:816995/150‑1 (MQ=21)
                              gTTCTTCTGGTACCTCATTAGCCTGTTGCTGTTCGAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCt                                                                                                                     <  2:305101/149‑1 (MQ=255)
                              gTTCTTCTGGTACCGCATTAGCCTGGTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCt                                                                                                                     <  4:1056434/149‑1 (MQ=255)
                                tcttctGGTTCCGGATAAGCCTGCTGCTGTTCCTGCTTGCGGGCTTTGGCGCGTGCAATAGCCGCTGCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCgg                                                                                                                  <  4:336184/150‑1 (MQ=25)
                                tcttctGGTACGGGATTAGCCTGTTGCTGTTCCCGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCgg                                                                                                                  <  7:501112/150‑1 (MQ=255)
                                tcttctGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGAGGGCAGATTTGCGCGGATCTACCTGTTCTTGTGGATACGCTTTAGCCGGTTGCTGTTAAAGTTTGCGCGCTTTGGGTCggg                                                                                                                 >  2:1266658/1‑151 (MQ=17)
                                tcttctGGGACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCgg                                                                                                                  <  1:1001840/150‑1 (MQ=255)
                                   tctGGCACCGCATTACCCTGCTGCTGTGCCAGCTTGCGTGCTTTGGCGCGGGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGc                                                                                                                <  4:1620836/149‑1 (MQ=255)
                                    atGGTACGGCATTAGCCTGTTGCTGTTCGTGGTTGGGTGCTTTGGCGCGTGCAATAGGCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCaa                                                                                                              <  1:1768040/149‑1 (MQ=17)
                                      ggTTCCGCATTAGCCTGGTGCTGTTCCAGCTTGCGTGCTTTCGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCaa                                                                                                              <  4:475030/148‑1 (MQ=255)
                                      ggTACCTCATTAGCCTGCTGCTGTTCCCGCTTGCTTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGAGCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAAt                                                                                                             <  6:1728629/149‑1 (MQ=255)
                                      ggTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCaa                                                                                                              <  1:1675399/148‑1 (MQ=255)
                                       gTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGc                                                                                                          <  8:139428/151‑1 (MQ=255)
                                       gTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGc                                                                                                          <  8:146977/151‑1 (MQ=255)
                                         aCCGCATTAGCCTGTTGCTGGTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCg                                                                                                         <  6:1016767/150‑1 (MQ=255)
                                         aCCGCATTAGCCTGGTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCg                                                                                                         <  1:314719/150‑1 (MQ=255)
                                         aCCGCATTAGCCTGGTGCTGTTCCAGCTTGCGTGCGTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCg                                                                                                         <  5:1685034/150‑1 (MQ=255)
                                          ccGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGGGCAATAGCAGCTTAGACGCCCGCTTAGCCCCGCTAGACATCTTCGTCTCGCTCCTCATTAGCCGGGTGCTGTTCCACATTGAGCGCTGTGgggcgggcgagaggggg                                                                                                       >  7:1657025/1‑142 (MQ=2)
                                           cGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCGACCTGTTGTTCTGGGTAGGCATTATCAGGTGGCGGGTCCAGTTGCCTCTCTTTGGCCCggggcgtatcgcct                                                                                                      >  5:283320/1‑140 (MQ=9)
                                            gCATTAGCCTGTTGCTGGTCCAGCTTGCGTGCGTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCtt                                                                                                     <  5:965862/151‑1 (MQ=255)
                                             cATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTc                                                                                                    <  5:429012/151‑1 (MQ=255)
                                             cATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCGTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTc                                                                                                    <  4:1522053/151‑1 (MQ=255)
                                             cATTAGCCTGGTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTGCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTc                                                                                                    <  4:1877419/151‑1 (MQ=255)
                                              aTTAGCCTGTTGCTGTTCGCGCTTGCGTGCTTTTGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCg                                                                                                   <  4:822078/151‑1 (MQ=255)
                                              aTTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCg                                                                                                   <  3:824243/151‑1 (MQ=255)
                                               ttAGCCTGTTGCTGGGCCCGCTTGCGTGCTTGGGCGCGGGCAATAGCCGCTTCTACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCg                                                                                                   <  6:1097337/150‑1 (MQ=25)
                                                 aGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCGAGCTGGTCTTCTGGCTCGGCAGTAGAAGGTTGGTTTTCGAGTTTGAGCTCTGTGGGTCGGGCAATAGCGGATTCGa                                                                                                  >  4:900242/1‑149 (MQ=14)
                                                 aGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTTCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAc                                                                                                 <  3:1330656/150‑1 (MQ=255)
                                                 aGCCTGGTGCTGGTCCAGCTTGCGTGCGTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAc                                                                                                 <  3:1519828/150‑1 (MQ=255)
                                                  cccTGGTGCTGTGCGCGCTTTCGGGCTTGGGCGCGGGCAATAGCCGCTGCGACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAcgg                                                                                               <  6:968946/150‑1 (MQ=17)
                                                   ccTGTTGCTGGTCCAGCTTGCGTGCGTTGGCGCGTGCAATAGCCGCGTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAcggc                                                                                              <  3:707615/151‑1 (MQ=255)
                                                    cTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGAAGCACGCTTTGCGCGGGTCTACCTGATCTTCTGTATCCGAATTAGACGGTTGCTGTTGCCGCTTGCGATATTTGGAACGGGCAATAGCGGCTTCGAcgggg                                                                                             >  2:1354852/1‑149 (MQ=11)
                                                      gTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGAAAACACCAGAGCTTCTGGGTCGGCAATAGACTTTAGCTTTTACATGATGAGCGGTTTGGCACGGTCAATAAAACATTCGAcggcggg                                                                                           >  4:440914/1‑150 (MQ=2)
                                                      gTTGCTGGTCGAGCTTGCGTGCGTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAcggcgg                                                                                            <  6:76923/150‑1 (MQ=255)
                                                         gcgggtcccccTTGCGTGCGTGGGCGCGTGCAATAGCCGCTTCCAAGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCttt                                                                                        <  6:794335/141‑1 (MQ=17)
                                                         gCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCttt                                                                                        <  5:145830/151‑1 (MQ=255)
                                                         gCTGTTCCAGCTTGCGTGCGTTGGCGCGTGCAATAGCCGCTGCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCttt                                                                                        <  3:433696/151‑1 (MQ=255)
                                                            gttcgtgCTTTCTTGCTTTCGCGCGTGCAATAGCCGCTTCGACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTgcg                                                                                     <  2:688728/145‑1 (MQ=17)
                                                            gTTCCAGGTTTCGTGCTTTGGCGCGTGCAATAGCCGCTTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTgc                                                                                      <  8:555670/150‑1 (MQ=255)
                                                            gTTCCAGCTTGCGTGCGTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTg                                                                                       <  1:731968/149‑1 (MQ=255)
                                                                 ccctttctggcctgcgcgcGTGCAATAGCCGCTGCGACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGAt                                                                                <  5:1330559/136‑1 (MQ=17)
                                                                 aGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGAGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGAt                                                                                >  7:763206/1‑151 (MQ=255)
                                                                       cGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCAGTTTGCGAGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGGGTTGCGCGGAGCgcggg                                                                          >  5:565371/1‑147 (MQ=17)
                                                                        gTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCAGTTTGCGCGCTTTGGCTCGGGCTATAGCGGCTTCCACGGCGGGTTTGCGGGGATCGGCCtg                                                                         >  1:326519/1‑151 (MQ=21)
                                                                          gCTTTCGCGCGTGCAATAGCCGCTTCCACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCtgtt                                                                       <  6:924202/151‑1 (MQ=255)
                                                                           cctcggcccctccAATAGCCGCGGCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGAGTGCGCTCGTGGGCGCGTGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCtgttg                                                                      <  5:1004057/139‑1 (MQ=14)
                                                                            gttGGCGCGGGCAATAGCCGCTTCGAAGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCtgttgt                                                                     <  7:473597/150‑1 (MQ=255)
                                                                              tGGCTCGTGCAATAGCCGCTTGGACGGCAGCTTTGGTCGGATCAACCTGTTCTTATGCCTCCGCTTTAGCCTGGTGCTGTTCGCGTTTGCTCGCTTTGGCGCGGGCAATAGCGGCTTCGACTGCGGCTTTGCGCGGATCGACCTgttgtt                                                                    <  3:566946/150‑1 (MQ=14)
                                                                               ggCGCGTGCAATAGCCGCTTCGACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCt                                                                  <  5:1266727/151‑1 (MQ=255)
                                                                               ggCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGATCCGCATTAGCCGGATGCTGTTCCCGGTTGCGCGCTGTGCCTCGCGATATAGCGGCTTCGACGGCGGCGTTGCGCGGCTCGACCTgttgttgt                                                                  >  3:192060/1‑149 (MQ=18)
                                                                                gcgcGTGCAATAGCCGCTTCTACGTCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCGGCATTAGCCGGTTGCTGTTCCCGTTTGCGGGCTTTTGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTg                                                                 <  4:1199443/151‑1 (MQ=255)
                                                                                gcgcGGGCAATAGCCGCGGCTACGGCAGCTTTGCGCGGAGCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTg                                                                 <  1:556717/151‑1 (MQ=14)
                                                                                ccacccgccctcgCCGCTTCCGCGCCCGCTTTGCGCGGATCCACCTGTTCTTATGTCTCGGCCTTCGCCTGTTGCTGTTCCACCTTCAGAGATTTGTGTCGCGAAATAGCGTCTTCGACGGACGCTTTGCGCGGATCGACCTGTTGTTCTg                                                                 <  1:1614831/139‑1 (MQ=0)
                                                                                   cgTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCTGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTggat                                                              >  8:105230/1‑149 (MQ=255)
                                                                                    gggCAATAGCCGCTTCTACTGCAGATTTGCGCGTATCTACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACTGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTc                                                             <  8:22091/149‑1 (MQ=14)
                                                                                    gggCAATAGCCGCGGCTACTGCTGCGTTTCGCTGATGAACCTGTTCTTCTGGCTCCGCAATAGCCTGTTGCTGGGCCCGTTTGCGGGCGTGCGCTCGGGCAATAGCGGCTTCGACTGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTc                                                             <  2:624632/149‑1 (MQ=14)
                                                                                       cAATAGCCGCTTAGCCGGCAGCTTTGCTGGGATGACCCCGTTCTTCCGGCTCCGCATTAGCCGGTTGCTGTTCCAGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGc                                                          <  1:1877456/151‑1 (MQ=17)
                                                                                        aaTAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCAGGTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCTACGGCGGGTTTGCGGGGATCGACCTCTTGTTCTGGATCggg                                                          >  8:76077/1‑149 (MQ=11)
                                                                                         aTAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCg                                                                                                         >  7:973498/1‑102 (MQ=255)
                                                                                           aGCCGCTTCGACGGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCAtt                                                       <  5:844937/150‑1 (MQ=255)
                                                                                             gaggggcaactgccgCTTTGCGCTGATCTACCTGTTCTTATGGCTCGTCTTTATCCTGTTGCTGTTCGGGTTTTCGGGCTTTGGCTCGGGCAATAGCGGCTTCTACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGc                                                    <  8:1872224/137‑1 (MQ=14)
                                                                                             cctcTTCGACGGCATCTTTTCGCTGATGTACCTGTTCTTCTGGCTCGGCATTAGCCTGTTGCTGTTCGCGTTTTCTCGCTTTCGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGc                                                    <  6:575390/148‑1 (MQ=14)
                                                                                               gCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTACCGATTGCGCGCTTTGGCTCGGGCAATAGAGGCTTCAACGGCAGATTTGCGCGGATCGCCCGGTGGTTGTGGGTCCGcggtcgcgg                                                  >  7:579754/1‑143 (MQ=11)
                                                                                               gCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCt                                                  <  8:66631/151‑1 (MQ=255)
                                                                                                 ggctactgccgCTGTGCGCGGATCCACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCGCGTTTGCTCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGt                                                <  6:139902/141‑1 (MQ=14)
                                                                                                  gctactggcgcgttGCGCGGATCCACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGtt                                               <  2:449813/139‑1 (MQ=14)
                                                                                                   ccactgccgCTTTGCGCTGAGCCACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGGTCCCGTTTGCGCGCTTTCGCTCGGGCAATAGCGGCTTCTACTGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTg                                              <  1:984476/143‑1 (MQ=14)
                                                                                                     aCGGCAGCGTTGCGCGGAGCCACCTGGTCTTCTGGCTCCGCATTAGCCGGGTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCt                                            <  3:1707086/151‑1 (MQ=255)
                                                                                                             tttGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGATTAGCGCGCCTCTGCAGTGGGTTCTGGGTAGTCATTAGCCTCTTGCTggtactgc                                    >  1:1512017/1‑144 (MQ=14)
                                                                                                                gcgcGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCGCGGGCGATAGct                                                                                                         >  7:1785812/1‑78 (MQ=255)
                                                                                                                     gATCCAGCTGTTCATCTGGCTGCGCTTGCGCCGGGTGCTGGGCGGGTTTTGGGGCGTTCGCGCGGGCAATAGCGGCTGCGACTGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGc                            <  5:461335/151‑1 (MQ=9)
                                                                                                                     gATCAACCTTTTCATCTGGATCCGCCCTACCCGGTTGCTGTTCGCGGTTTCGAGCTCTGGCGCGTGCAATAGCGGCGTCGACTGCCGCTTTGCGCGGATCCACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGc                            <  7:356479/151‑1 (MQ=14)
                                                                                                                        gtcccggtgcttccGCCTCCGCATCACCCTTGTGCTGTTCGGGTTTGCTGGCGTGCGCGCGGGCAATAGCCGCTTCTACTGCCGCTTTGCGCGGATCCACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCttt                         <  1:1731761/142‑1 (MQ=2)
                                                                                                                         aaCCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGATTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGCCTTAGCGCGGATAGAACTGATATTCTGGATAGAAATAAGCCTGTTTCTGTTCCAGCTTGCgaaattt                         >  6:1492168/1‑144 (MQ=14)
                                                                                                                          acgagctattcttccTCGGCAATAGCCTGCTGCTGGGCGGGTTTGCTGGCCTTCGCGCGGGCAATAGCCGCGTCTACTGCCGCTTTGCGCGGATCCACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTgg                       <  3:1757419/137‑1 (MQ=2)
                                                                                                                          aCCTGGACTTCTGGCTCCGGATTATCCTGCTGCTGTGCCGGTTTGCGGGCGTTCGCGCGGGCAATAGCGGCGGCTACTGCGGCTTTGCGCGGATCCACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTg                        <  1:1827355/150‑1 (MQ=14)
                                                                                                                            gtgtgCTTCTGGCTCCGCATGAGCCTGATGCTGTTCGCGTTTGCGGGCGTTCGCGCGGGCAATAGCCGCGGCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCa                     <  7:1156615/150‑1 (MQ=11)
                                                                                                                                  ttctTGCTCGGCTTTATCCTGTTGCTGTTCGCGTTTTCTGGCGTTTGCGCGGGCAATAGCGGCTGCTACTGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGc                <  6:30389/150‑1 (MQ=14)
                                                                                                                                   tctGGCTCCGCATTAGCCTGTTGCTGGTCCCGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCGTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGc                <  1:1265168/149‑1 (MQ=255)
                                                                                                                                       ccTCCGCAACAGCCTGGTGCTGGTCCCGTTTGCGCGCGTTGGCGCGGGCAATAGCCGCGTCTACTGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGc          <  1:844673/150‑1 (MQ=14)
                                                                                                                                        ttCCGCTTTATCCGTTTGCTGTTCAAGTTTTATCTCTTTTGCTCTTGCATTAGCGGTTTCGATGTCGGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGc          <  8:323042/149‑1 (MQ=14)
                                                                                                                                           cGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCt      <  7:1713267/151‑1 (MQ=255)
                                                                                                                                              aTTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGGTTTACGCGGATCCACGTCATATGAGGCGTCGGCAGTACCCTCTACATGATCCAGCTTGCGTGCGTTGGCCCGGGCGATacaagcttcc   >  5:1599106/1‑142 (MQ=9)
                                                                                                                                              aTTAGACGGTTGCTGTTCACCTTTTCGTTATTTGTCTTTGGCTATAGCTGGCTCTTCGGATGTTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCg   <  2:1514323/151‑1 (MQ=9)
                                                                                                                                               gcccccGGGTGCTGGGCCCGCTTGCGTGCTTTGGCGCGGGCAATACCGGCTTCGACGGCCGCGTTGCGCGGATCGACCTCTGCTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGa  <  1:1353730/147‑1 (MQ=11)
                                                                                                                                                     |                                                                                                                                                
CGGCAACTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGA  >  DH1/2169399‑2169692

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑