Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*DH12,169,7200CG26.9% 181.9 / 39.8 150E614Q (GAA→CAA) rsxCelectron transporter RsxC
Reads supporting (aligned to +/- strand):  ref base C (64/42);  new base G (35/4);  total (103/47)
Fisher's exact test for biased strand distribution p-value = 5.60e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 154 total aligned reads displayed.

CTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTCTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTT‑CTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCGCGGGC  >  DH1/2169570‑2169870
                                                                                                                                                      |                                                                                                                                                       
ccgttgcgcGGGCAATAGCCGCTGCTACTGCGGCTTTGCGCGGATCCACCTGGTGTTCTGGCTCGGCATTATCCTGTTGCTGTTCCAGCTTGCGTGCTTTCGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGttc                                                                                                                                                         <  1:1198436/143‑1 (MQ=14)
    ggCGCGGGCAATAGCGGCTGCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTtcttct                                                                                                                                                     <  1:1447885/151‑1 (MQ=255)
      cgcGGGCAATAGCGGCGTCTACGGCGGCTTTGCGCGGAGCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCCGCTTGCGTGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTCTTCTgg                                                                                                                                                   <  3:326282/149‑1 (MQ=14)
       tCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGAGGATCGACCTCGTCTTCTgct                                                                                                                                                  >  4:936137/1‑149 (MQ=255)
        ggggCAATAGCGTCTGGAACTGCGGCTGTTCGCGGATCGAACTGATGTTCTGGCTCGTCATTAGCCTGTTGCTGGGCCTGCTTGCTGGCTTTGGCTCGGGCAATAGCCGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTCTTCTGGtt                                                                                                                                                 <  7:213560/150‑1 (MQ=14)
        cGGGCAATAGCCGCTTCGAGTGCGGCGTTGCGCGGATGGACCTGGTGTTCTTCCTCGGCATTAGCCTGTTGCTGTTCCTGGTTTCTTGCTTTCGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTCTTCTGGtt                                                                                                                                                 <  1:1524864/151‑1 (MQ=14)
         cggccagcccggcggcGACGGCGGCTTTGCGCGGATCTACCTGTTTTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGTCTATAGCGGCTTCTACTGCTGCTTTGCGCGGATCGACCTGTTCTTCTGGTTc                                                                                                                                                <  8:1046627/136‑1 (MQ=14)
         cggcacacgccgccgcGACCGCGCCTGAGCGCGGAGCCACCTGTTGTTCTTGTTCCGCAGTCGCCTGTTGATGTGCCAGCTTGGTTGCTTTGGCTAGTGCACTAGCGTGGTCTACGGATGCTTTGCGCGGATCGACCTGTTCTTCTGGTTc                                                                                                                                                <  1:1328676/136‑1 (MQ=2)
            cAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGAGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGGTTTGCGAGGATAAACAACTTATTCTGGTTcct                                                                                                                                              >  2:1275344/1‑149 (MQ=11)
            cAATAGCGGCTGCAACTGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATAAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACTGCGGCTTTGCGCGGATCGACCTGTTCTTCTGGTTCCGc                                                                                                                                             <  3:659627/151‑1 (MQ=255)
             aaTAGCCGCGGCGACGGCGGCTTTGCGCGGATCCACCTGTTCTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTTCGTGCTTTGGCACGGGCAATAGCGGCTTCGACTGCGGCTTTGCGCGGATCGACCTGTTCTTCTGGTTCCGCa                                                                                                                                            <  7:83143/151‑1 (MQ=11)
               ccgccgcggccccggccgCGTTGCGCGGATCTACCTGATGGTCTGGAACGGCATGCGCCTGGAGCTCTGGCAGGTTCGGTGCGTTGGCTCGTGTAATCGCCTCTTCTACTGCCGCTTTGCGCGGATCGACCTGTTCTTCTGGTTCCGCAtt                                                                                                                                          <  7:376539/139‑1 (MQ=9)
                 gccgcggcgtctgcggcTTTCCGCGGAGCTAACTGTTGTTCTGGCTCGGCTTTATCCTGTTGCTGTTCGAGCTTGGGGGCGTGGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTCTTCTGGTTCCGCATTa                                                                                                                                         <  5:1673841/138‑1 (MQ=14)
                    gcgtctactgcggaTTTGCGGGGTGCTACGTGTTGTTCTGGCTCGGCATTAGCCTTGTGCTGGTCGCGTTTGCGTGCTTTTGCTCGGGCAATAGCCGCTTCTACTGCCGCTTTGCGCGGATCGACCTGTTCTTCTGGTTCCGCATTAGc                                                                                                                                       <  3:1734272/140‑1 (MQ=9)
                      ttCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCTGCTTCGACGGCTGGTTTGCGGGGATCGCCATGTGTTGCTGCGTCCGCAttttgctgt                                                                                                                                   >  3:827473/1‑144 (MQ=14)
                         gACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCTGCTTCGACGGCGGATTTGCGAGGATCGACCTGTTGTTCTGGTTCCGCATTAGACTGTTgt                                                                                                                                >  8:1398705/1‑150 (MQ=255)
                          tatggggcTTTTGGCTGATGGACCTGGTGTTCTTCCTCGTTATTAGCCTGTTGCTGTTCGTGCTTTCTTGCCTTCGCGCGGGCAATAGCCGCTTCTACTGCCGCTTTGCGCGGATCCACCTGTTCTTCTGGTTCCGCATTAGCCTGTTGc                                                                                                                                <  6:142418/145‑1 (MQ=9)
                           cggcggCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGGGCTTTGGCTCGGGCTTTAGCTGCTTCGACGGCGGGTTTACGGGGATCGCCATGTTGTTCTGGTTCCGTATTTTCCTGTTGGTg                                                                                                                              >  3:1268798/1‑151 (MQ=11)
                              cggcTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGAGGATCGACCTGTTGTTCTGCTTCCTGATTAGCCTGTTGCTGTTc                                                                                                                           >  4:1879328/1‑151 (MQ=255)
                                 cTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCCGGTTTGCGAGGATCGCCCTGTTGTTCTGGGTCCGCATTAGCCTGTTGGTGTTcc                                                                                                                          >  3:1225351/1‑149 (MQ=11)
                                    tGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCCCGGGCAATAGCGGCTTCGACGGCGGGTTTGCGGGGATCGCCAACGGGTTCTGGGTCGGGAGTAGCCTGATGCTCTTcctgatt                                                                                                                     >  1:736110/1‑146 (MQ=11)
                                    tGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGTTCCGAATTATCCTGTTGCTGTTCCAGAtt                                                                                                                     >  5:237817/1‑151 (MQ=255)
                                      cgcgGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCCCGGGCAATAGCGGCTTCGACGGCCGATTTCCGAGGATCGGCATCTGGTTCTGCGTCCTCATTATGCTGTAGGTGTTCCTGCttcg                                                                                                                   >  1:1871736/1‑149 (MQ=11)
                                      cgcgGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGAGCTTTGGCGCGGGCAATAGCTGCTTCAACGGCAGGTTTCCGGGGATCACCATCTGTTTCTGCGTCCTAATTATCCTGATGATGTTCCAGGttcc                                                                                                                   >  4:1444297/1‑149 (MQ=2)
                                       gcgGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGAGCTTTGGCACGGGCAATAGCTGCTTCAACGGCAGGTTTACGAGGATCAGCCACTTGTTCTGCTTCCGAATTATCCTGATGGTCTTCCAGAttccc                                                                                                                  >  8:281054/1‑148 (MQ=2)
                                        cgGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGAGCTTTGGCTCGGGCAATAGCTGCTTCGACGGCGGGTTTGCGAGGATCGGCCTCGTGTGCTGCTTCCTTATTTTCCTGAAGATCTTCCAGCTTccgc                                                                                                                 >  3:192290/1‑151 (MQ=2)
                                             cGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCTGCTTCCACGGCAGCTTTACGAGGATCAACAACTTGTTCTGCTTCCTGATTATGCTGAAGATGTTCCAGATTgccacatg                                                                                                             >  8:1302517/1‑144 (MQ=2)
                                                ccTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCTGCTTCGACGGCAGATTTTCGAGGATCGCCATCTTGTTCTGCTTCCTGATTATCCTGATGATCTTCCAGCTTccgtcgtgattc                                                                                                         >  5:1317036/1‑142 (MQ=2)
                                                ccTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGAGCTTTGGCACGTGCAATATCCGAATCGACGGCGTCTTAGCTCGCCTCACCTTCATCTTGTGCCTAAGCATTAGACTGTTTCATTTAAAAATTGCGCGCTTTggg                                                                                                         >  7:1537472/1‑150 (MQ=2)
                                                   gttgttCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGGTTTGCGCGGATCGCCCTGTTGTGCTGCTTCGGCATTAGGCTGTTGGTGTTCCAGCTTgcggggtgtgtcccg                                                                                                      >  5:572766/1‑139 (MQ=11)
                                                        tCTGGCTCGGCATTAGCCTGTTGCTGTTCAAGCTTGCGTGCTTTGGCACGGGCAATAGCTGCTTCGACGGCGGCTTTGCGGGGATCGCCCTGTTGTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCCCGGGCa                                                                                                  >  7:640531/1‑150 (MQ=11)
                                                          cgccgcgcccccccccTGCTCCTGTTCCAGCTTGCTTTTTTTTTCTCTTGCAATATCCGCTTCGAGGTCCTCTTTGCTATTATCTATCTGTTCTTATGTCGCTGTTTTTCTCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATa                                                                                               <  6:966510/137‑1 (MQ=2)
                                                            gCTTGGGATTATCCTGTTGCTGTTCGTGTTTTTTTGCTTTTGCTCGGGCAATAGCGGCTTCTACTGCGGCTTTGCGCGGATCTACCTGTTCTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGc                                                                                             <  4:291917/151‑1 (MQ=14)
                                                               ccgCATTAGCCTTTTGATTTTCCAGGTTGCGCTCTTTGTCAATGTCAATAGTTCCTTCGATTTCGGCTGTGCTCGGTCTGACGTGCTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGc                                                                                          <  8:560808/149‑1 (MQ=2)
                                                               cGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCAGCTTTACGAGGATCGACCACGTGTTCTAGATCCGAATAAGCATGTTGATGTTAAAGCTTGAAAGCTTTGGCAAGAGCAATAGCGGc                                                                                          >  6:1187060/1‑151 (MQ=2)
                                                                  ccttACCCTGGTGCTGTTCCAGTTTTCTTTATTTTTCGCGGTCAATAGAGTCTTCGACTTATGTTTTGAGTGTATCCATCTTCTCCTCTGTTGCGTTATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCGCGGGCGATAGCTGCTTc                                                                                       <  6:1648978/149‑1 (MQ=2)
                                                                     ccgccgccggctgctCCACCGCGCGTGCGTTGGCCCCGGCAATAGCGTCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTCTTCTGGGTCCGCATTAGCCTGCTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGAc                                                                                    <  1:383435/142‑1 (MQ=14)
                                                                     ccccccggtccctctCCCGCTCGCGTGCTTTGGCTCGTGCAATAGCTGCTTCGACGGCTGCTTTGCGCTGATCTACCTTTTCTTCTGGTTCCTCATTAGCCTGTTGCTGTTCCAGATTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAc                                                                                    <  6:565047/137‑1 (MQ=11)
                                                                                gggtCCAGCTTGCGTGCTTTGGCCCGGGCAATAGCGGCTTCGACGCCTGCTTTGCGCGGATCGACCTGTTCTTCTGGTCCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTgc                                                                         <  5:858236/148‑1 (MQ=255)
                                                                                  ttCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGCCCTGTGGTGCTGGTTCGGCATTAGCCTGTTGGTGTTCCAGCTTGCGCGATGTTGCCCGGGCAATAGCTGCTTCTACGTCGGGTTTccgg                                                                       >  7:1747117/1‑150 (MQ=11)
                                                                                   gccgcgtttcgtgcgtgGGCGCGGGCAATAGCCGCTGCGACTGCCGCTTTGCGCGGATCGACCTGTTCTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCCCGGGCAATAGCGGCTTCGACGGCGGCTTTGcgcg                                                                      <  1:540726/142‑1 (MQ=14)
                                                                                   cccAGCTGGCGGGCTTTGTCTCGTGCAATACCCGCGGCGACGGCCGCTTTGAGCGTCTCTCGCTGTCATTCTGGTTCGGCACTCCCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGcgcg                                                                      <  3:439674/150‑1 (MQ=2)
                                                                                      aGCTTGCGTGCTTTGGCTCGTGCAATAGCGGCTTCGACGGCTGCTTTGCGCGGATCTACCTGTTCTTCTGTTTCCTCATTATCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGAt                                                                   <  8:762221/151‑1 (MQ=14)
                                                                                      aGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTCTTCTGGTTCCGGATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCCCGGGCAATAGCTGCTTCTACGGCGGGTTTGCGAGGAt                                                                   >  1:424658/1‑151 (MQ=14)
                                                                                       gCTTGGGTGCTTTGGCTCTTGCAATAGCTTCTGCGTCTTCCGCTTTTCGAGGATCTACCTCTTGTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATc                                                                  <  4:928190/151‑1 (MQ=11)
                                                                                        cTTGCGTGCTTTGGCTCGTGCAATAGCGGCTTCGACGGCTGCTTTGCGCGGATCTACCTGTTCTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCaa                                                                                                 <  4:1713053/119‑1 (MQ=255)
                                                                                         ttGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGCCCTGGTCTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCCCGGGCAATAGCGGCTTCTACGGCAGTTTTGCGAGGATcat                                                                >  7:1911358/1‑149 (MQ=11)
                                                                                          tGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGGTTTGCGCGGATCGACCTGTTCTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCCCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCCAc                                                               >  1:1594771/1‑151 (MQ=255)
                                                                                          tGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTCTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCTGCTTCTACGGCGGTTTTGCGAGGATCTAc                                                               >  1:957301/1‑151 (MQ=255)
                                                                                          tGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTCTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGAc                                                               >  3:941723/1‑151 (MQ=255)
                                                                                           gCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGTTCCGCATTAGCCTGTTGGTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCCGCTTTACGTGGATCGccc                                                              >  1:537272/1‑151 (MQ=11)
                                                                                              tGCTTTGGCTCGTGCAATAGCGGCTTCGACGGCTGCTTTGCGCGGATCTACCTGTTCTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATa                                                                                               <  4:1478147/115‑1 (MQ=255)
                                                                                              tGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGGTTTAAGATCATAAAAGAGTAGTTGTGGTTAAGAATTATAATGTTACTGTTCCAGAATGAGCGCTTTGGATCGTTAAATAGAAGCTTCGACGGCGGGTTTggggggggcggcgggg                                                           >  2:1126557/1‑136 (MQ=255)
                                                                                                  ttggctcttgaaaTAGTGGGTTCGACTCCAGCTTTTCGCTGAGCAACCTTTTCTTCTGTTTCCTCATGATCGGGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCtgttgt                                                        <  6:1512813/139‑1 (MQ=2)
                                                                                                    ggCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTCTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCCCGGGCTATAGCTGCTTCGACTGCGGCTTTGCGAGGATCGACCTGTGGTT‑Ct                                                    >  7:578480/1‑151 (MQ=14)
                                                                                                      cgcGGGCAATAGCCGCGGCAACTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATAGatcggatgagctcc                                                   >  3:412547/3‑138 (MQ=14)
                                                                                                        ggggCAATAGCCGCGGCAACTGCGGCTGTGCGCGGAGCGACCTGTTCTTCTGGCTCCGCATTAGCCTGGTGCTGTTCCAGGTTGCGGGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTT‑CTGGtt                                                <  5:392553/150‑1 (MQ=11)
                                                                                                         gggCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTCTTCTGGTTCCGCATTAGCCTGTTGCTCTTCCAGCTTGCGAGCTTTGGCCCGTGCAATAGCTGCTTCGACGGCTGTTTTGCGCGGATCTCCCTGTGGTT‑CTgcgtc                                               >  5:127663/1‑147 (MQ=14)
                                                                                                            cAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTCTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCCCGGGCAATAGCTGCTTCTACGGCGGGTTTTCGAGGATCTTCCTGGGGTT‑CTGGTTCCgt                                            >  5:583325/1‑150 (MQ=14)
                                                                                                             aaTAGCGGCTTCGACGGCGGATTTGCGCGGATCGGCCTGTTGTTCTGGTTCCTCATTATCCTGTTGATGTTCCAGCTTGCGCGCTTTGGCCCGGGAAATAGCTGCTTCGACGGCAGGTTTACGAGGATAAACATGTGTTT‑CTGGGTcggt                                            >  2:1761947/1‑147 (MQ=11)
                                                                                                               tAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTCTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTTCGCGGATCAACCTGTGGTT‑CTGCTTcgtgatt                                         >  1:1062102/1‑145 (MQ=14)
                                                                                                                aGCGGCTTTGACGTCTGCTTAGCTCGGATCCACCTGTTGTTGTGGTTCCGCTTTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTT‑CTGGTTCCGCATTa                                        <  8:411442/151‑1 (MQ=11)
                                                                                                                aGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTCTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCCCGGGCAATAGCGGCTTCGACGGCCGCTTTTCGAGGATCGCCATGGTGTT‑CTGGTTCGGCAtt                                         >  5:1847331/1‑150 (MQ=14)
                                                                                                                  cGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTCTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCCCGGGCCATAGCTGCTTCGACGGCCGGTTTGCGCGGATCGTCATGGTGTT‑CTGGTTcggaagtatc                                      >  1:1158182/1‑142 (MQ=14)
                                                                                                                    gCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCCCGGGCCATAGCGGCTTCGACGGCGGCTTTGCGGGGATCGCCCTGTGGTG‑CTGCTTcgttagtttcct                                    >  5:43540/1‑140 (MQ=11)
                                                                                                                    gCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTCTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCTGCTTCGACGGCGGCTTTGCGAGGATCGACCTGTGGTT‑CTGGTTCCGCATTATCCt                                    >  7:1010234/1‑151 (MQ=255)
                                                                                                                        cGACGGCGGCTTTGCGCGGATCGACCTGTTCTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTCTTGTT‑CTGGTTCCTCATTATCCTGTTg                                >  8:1378885/1‑151 (MQ=255)
                                                                                                                        cGACGGCGGCTTTGAGCGGATCGACCTGTTCTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCAGTTGTT‑CTGCTTCCGGAGTAGCCTGTTg                                >  6:73245/1‑151 (MQ=255)
                                                                                                                         gACGGCGGCTTTGCGCGGATCGACCTGTTCTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCTGCTTCGACGGCAGATTTACGAGGATCAGCATGTGTTT‑CTGCTTcctgagtatcctgatg                                >  6:274471/1‑136 (MQ=1)
                                                                                                                           cggcggCTTTGCGCGGATCGACCTGTTCTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCCCGGGCGATAGCTGCTTCGACGGCGGGTTTGCGGGGATCGCCCTGGTGTG‑CTGGGTCCTCAGTAGCCTGTTGGTg                             >  7:1165053/1‑151 (MQ=14)
                                                                                                                           cggcggCTTTGCGCGGATCGACCTGTTCTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCTGCTTCGACGGCCGGTTTCCGGGGATCGGCCTGTGTTG‑CTGCGTCCTCATTatgctggtgatg                             >  1:1491788/1‑140 (MQ=11)
                                                                                                                           cggcagCTTTGCGCGGATCCACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGc                                                                                                         <  7:1631306/76‑1 (MQ=11)
                                                                                                                            ggcggcTTTGCGCGGATCGACCTGTTCTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCCCGGGCAATAGCGGCTTCGACGGCTGGTTTGCGAGGATCGCCAAGTGGTT‑CTGGTTCCTCATTAGCCTGTAGCtct                            >  5:934797/1‑149 (MQ=14)
                                                                                                                             ggagcTTTGCGCGGATCCACCTGTTCTTCTGGTTCCGGTCTAGCGTGTTGGCTTCCGAGCTTGCGGGCGTTCGCGCGGGCAATAGCCGCGGCGACGGCGGCTTTGCGCGGATCGACCTGTTCTT‑CTGGTTCCGCATTAGCCTGTTGCTGtt                           <  5:14865/148‑1 (MQ=11)
                                                                                                                             gcggcTTTGCGCGGATCGACCTGTTCTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCCCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGCCCTGTTGTT‑CTGCTTCCGCATTATCCTGTTGCTGtt                           >  3:1474536/1‑151 (MQ=255)
                                                                                                                              cggcTTTGCGCGGATCGACCTGTTCTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGAGGATCGCCCACTTGTG‑CTGGTTCCGCATTAGCCTGTTGCTGTTc                          >  8:465397/1‑151 (MQ=255)
                                                                                                                               ggcTTTGCGCGGATCGACCTGTTGTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCGCGGGCAATAGCTGCTTCGACGGCGGGTTTGCGCGGATCGGCCAGGGTTG‑CTGGTTCGTGATTATCCTGGTGGTCTTcc                         >  2:1172465/1‑151 (MQ=11)
                                                                                                                               ggcTTTGCGCGGATCGACCTGTTGTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCGCGGGCAATAGCTGCTTCAACGGCGGATTTACGAGGATCACCCTCTTGTT‑CTGGGTCGGGATTatgctgaagttcttcc                         >  6:329973/1‑136 (MQ=11)
                                                                                                                               ggcTTTGCGCGGATCGACCTGTTCTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCCCGGGCAATAGCTGCTTCGACGGCGGGTTTGCGGGGATCGCCCACGGTTG‑CTGGTTCCTCATTATGCTGTTGTTGTTcc                         >  3:727165/1‑151 (MQ=14)
                                                                                                                               ggcTTTGCGCGGATCGACCTGTTCTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTT‑CTGGTTCCGCATTAGCCTGTTGCTGTTcc                         >  7:406740/1‑151 (MQ=40)
                                                                                                                               ggcTTTGCGCGGATCGACCTGTTCTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGATTTCCGAGGATCGCCCAGTTTTT‑CTGGTTCCGGAGTATCCTGTTGCTCTTcc                         >  2:1865244/1‑151 (MQ=14)
                                                                                                                                 cTTTGCGCGGATCGACCTGTTCTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCGCGGGCAATAGCTGCTTCGACGGCGGCTTTCCGGGGATCGCCAACTTGTT‑CTGCTTCCTAATTATCCTGTTGATCTTcc                         >  1:1427573/1‑149 (MQ=14)
                                                                                                                                 cTTTGCGCGGATCGACCTGTTCTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCGCGGGCAATAGCTGCTTCGACGGCAGGTTTACGAGGATCGGCATCGTGTT‑CTGCTTCCTAATTATCCTgaagatcttcc                         >  6:1232160/1‑139 (MQ=11)
                                                                                                                                  tttGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGGGCAATAGCTGCTTCGACGGCAGGTTTGCGTGGATCGCCAACGTGTG‑CTGGTTCCGAATTTTCCTGAAGGTCTTCCAgg                      >  7:1428968/1‑150 (MQ=11)
                                                                                                                                    tGCGCGGATCGACCTGTTCTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCTGCTTCGACGGCGGCTTTGCGAGGATCAACCACGTTTT‑CTGCTTCCGAATTATCCTGATGATGTTCCAGAtt                    >  6:409423/1‑151 (MQ=14)
                                                                                                                                     gcgcGGATCCACCTGTTCTTCTGGGTCCGCATTAGCCTGTTGCTGTTCCAGCTTgcgcg                                                                                                                <  3:399194/59‑1 (MQ=255)
                                                                                                                                      cgcgGATCGACCTGTTCTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTT‑CTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTgc                  >  4:627254/1‑151 (MQ=40)
                                                                                                                                       gcgGATCGACCTGTTCTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTT‑CTGGTTCCGAATTAGCCTGTTGATGTTCCAGCTTccg                 >  3:1505100/1‑151 (MQ=255)
                                                                                                                                       gcgGATCGACCTGTTCTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGAGGATCGACCTGTTGTT‑CTGGTTCCGCATTAGCCTGTTGATGTTCCAGCTTgcc                 >  5:1808079/1‑150 (MQ=255)
                                                                                                                                       gcgGATCAACCTGTTCTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCtt                                                                            <  7:714236/93‑1 (MQ=255)
                                                                                                                                        ctgATCGACCTGTTCTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCTGCTTCGACGGCGGCTTTGCGCGGATCGCCCTGTTGTT‑CTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTgccc                >  5:1835101/3‑149 (MQ=255)
                                                                                                                                        cgGATCGACCTGTTCTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTT‑CTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTgcgc                >  1:1032706/1‑151 (MQ=40)
                                                                                                                                         ggATCGACCTGTTCTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGGTTTGCGAGGATCGACCTCTTGTT‑CTGGGTCCGCATTATCCTGTTGCTGTTCCAGCTTgcg                 >  5:29231/1‑149 (MQ=255)
                                                                                                                                           aTCGACCTGTTCTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCTGCTTCGACGGCGGATTTGCGAGGATCGACCTCTTGTT‑CTGCTTCCAGATTAGCCTGTTGCTGTTCCAGCTTccgacat             >  6:185206/1‑147 (MQ=14)
                                                                                                                                             cGACCTGTTCTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCTGCTTCAACGGCGGATTTACGAGGATCAACATCTTGTT‑CTGCTTCCTAATTATCCTGTTGATGTTCCAGATTCCGAGAttt           >  2:868517/1‑151 (MQ=14)
                                                                                                                                               aCCTGTTCTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCGCGGGCGATAGCTGCTTCAACGGCGGGTTTGCGAGGATCCGCAACTTTTT‑CTGCTTCGGAAGTATCCTGATGATCTTCCAgatagatcgctatcg         >  3:116260/1‑137 (MQ=2)
                                                                                                                                                ccTGTTCTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGGGGATCGCCCTGGTGTG‑CTGGTTCCGCATTAGCCTGTTGCTCTTCCAGCTTCCGAGATTAGgc        >  2:1231088/1‑151 (MQ=14)
                                                                                                                                                 cTGTTCTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCTGCTTCGACGGCGGCTTTGCGAGGATCGGCCTCTTGTT‑CTGCTTCCGGAGTAGCCTGTTGGTCTTCCAGCTTgccacatttggcc       >  2:358586/1‑140 (MQ=14)
                                                                                                                                                     tcttctGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCGCGGGCAATAGCTGCTTCGACGGCGGCTTTGCGCGGATCGCCCTGGTGTT‑CTGGTTCCGCATTATCCTGTTGCTGTTCCAGATTGCGAGGTTTTTCGCggg   >  7:909153/1‑151 (MQ=14)
                                                                                                                                                      cttctGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCGCGGGCAATAGCTGCTTCAACGGCGGGTTTGCGAGGATC‑ACCAACTGTTGCTGGTTCGGAATTTTCCTGTTGTTGTTCCAGATTccgggattagtccgctgt  >  4:1146283/1‑136 (MQ=0)
                                                                                                                                                      |                                                                                                                                                       
CTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTCTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTT‑CTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCGCGGGC  >  DH1/2169570‑2169870

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑