Predicted mutation
evidence seq id position mutation annotation gene description
JC DH1 3,898,512 Δ19 bp intergenic (+163/+239) yjjW → / ← yjjV glycine radical enzyme activase/DNAse

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? DH1 = 38985119 (0.020)538 (1.100) 231/294 0.0 98.1% noncoding (151/414 nt) repeat_region repeat region
?DH1 3898531 = 12 (0.020)noncoding (171/414 nt) repeat_region repeat region

Only 100 of 559 total aligned reads displayed.

CGGCCTACGGTTCGGCACAGACTTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATTGTGCGCCAACTGCCGGATGCGGCGCGAACGCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGTCGCATCAGGCATTATGCGCCGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGTTCGGCACAGACTTGTAGGCATGATAAGACGCGACAAGCGTCGCATCAGGCATTGTGCGCCAACTGCCGGATGCGGCGTGAACGCCT  >  DH1/3898361‑3898659
                                                                                                                                                      |                                                                                                                                                    
cGGCCTACGGTTCGGCACAGACTTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATTGTGCGCCAACTGCCGGATGCGGCGCGAACGCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCG                                                                                                                                                      <  3:432589‑M1/151‑1 (MQ=255)
cGGCCTACGGTTCGGCACAGACTTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATTGTGCGCCAACTGCCGGATGCGGCGCGAACGCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCG                                                                                                                                                      <  1:1556395‑M1/151‑1 (MQ=255)
 ggCCTACGGTTCGGCACAGACTTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATTGTGCGCCAACTGCCGGATGCGGCGCGAACGCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGc                                                                                                                                                     <  7:721241‑M1/151‑2 (MQ=255)
   ccTACGGTTCGGCACAGACTTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATTGTGCGCCAACTGCCGGATGCGGCGCGAACGCCTTATCCGGCCTACGGTTCGGCACACCCCTCTAGGCTGGATAAGACGCGACAAGCGccg                                                                                                                                                   >  1:736898‑M1/1‑148 (MQ=255)
    cTACGGTTCGGCACAGACTTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATTGTGCGCCAACTGCCGGATGCGGCGCGAACGCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGAGACAAGCGccg                                                                                                                                                   >  1:1023381‑M1/1‑147 (MQ=255)
     tACGGTTCGGCACAGACTTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATTGTGCGCCAACTGCCGGATGCGGCGCGAACGCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGccgc                                                                                                                                                  >  4:495017‑M1/1‑146 (MQ=255)
        ggTTCGGCACAGACTTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATTGTGCGCCAACTGCCGGATGCGGCGAGAACGCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGacgcctgc                                                                                                                                              >  6:1036165‑M1/1‑143 (MQ=255)
           tCGGCACAGACTTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATTGTGCGCCAACTGCCGGATGCGGCGCGAACGCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGccgactgccg                                                                                                                                            <  1:1603339‑M1/150‑11 (MQ=255)
             ggCACAGACTTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATTGTGCGCCAACTGCCGGATGCGGCGCGAACGCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGccgactgccggat                                                                                                                                         >  3:1317787‑M1/1‑138 (MQ=255)
             ggCACAGACTTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATTGTGCGCCAACTGCCGGATGCGGCGCGAACGCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGccgactgccggat                                                                                                                                         <  8:134756‑M1/151‑14 (MQ=255)
               cacaGACTTGTAGGCCTGATAAGACGCGTCATGCGTCGCATCAGGCATTGTGCGCCAACTGCCGGATGCGGCGCGAACGCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGccgactgccggatgc                                                                                                                                       <  2:438813‑M1/151‑16 (MQ=255)
               cacaGACTTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATTGTGCGCCAACTGCCGGATGCGGCGCGAACGCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGccgactcccggatgc                                                                                                                                       >  4:251067‑M1/1‑136 (MQ=255)
                acaGACTTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATTGTGCGCCAACTGCCGGATGCGGCGCGAACGCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGccgactgccggatgcg                                                                                                                                      >  8:615237‑M1/1‑135 (MQ=255)
                      ttGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATTGTGCGCCAACTGCCGGATGCGGCGCGAACGCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGAGccgacagccgcatgcggcg                                                                                                                                   >  8:287595‑M1/1‑129 (MQ=255)
                          aGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATTGTGCGCCAACTGCCGGATGCGGCGCGAACGCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGccgactgccggatgcggcgtgaacg                                                                                                                             <  7:1022504‑M1/150‑26 (MQ=255)
                           ggCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATTGTGCGCCAACTGCCGGATGCGGCGCGAACGCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGccgactgccggatgcggcgtgaacgcc                                                                                                                           >  1:1481829‑M1/1‑124 (MQ=255)
                              cTGATAAGACGCGTCAAGCGTCGCATCAGGCATTGTGCGCCAACTGCCGGATGCGGCGCGAACGCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGccgactgccggatgcggcgtgaacgcctt                                                                                                                         >  8:1416809‑M1/1‑121 (MQ=255)
                                gATAAGACGCGTCAAGCGTCGCATCAGGCATTGTGCGCCAACTGCCGGATGCGGCGCGAACGCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGccgactgccggatgcggcgtgaacgcctta                                                                                                                        <  3:1206907‑M1/149‑31 (MQ=255)
                                 aTAAGACGGGTCAAGCGTCGCATCAGGCATTGGGCGCCAACTGCCGGATGCGGCGCGAACGCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAACCGccgactgccggatgcggcgtgaacgccttatcc                                                                                                                     <  3:1653939‑M1/151‑34 (MQ=255)
                                   aaGACGCGTCAAGCGTCGCATCAGGCATTGTGCGCCAACTGCCGGATGCGGCGCGAACGCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGccgactgccggatgcggcgtgaacgccttatccg                                                                                                                    <  4:1705672‑M1/150‑35 (MQ=255)
                                     gACGCGTCAAGCGTCGCATCAGGCATTGTGCGCCAACTGCCGGATGCGGCGCGAACGCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGccgactgccggatgcggcgtgaacgccttatccggcc                                                                                                                 <  1:630602‑M1/151‑38 (MQ=255)
                                      aCGCGTCAAGCGTCGCATCAGGCATTGTGCGCCAACTGCCGGATGCGGCGCGAACGCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGTCATGATAAGAAGCGACAAGCGacgactgacgtattcggcgtgaaagccttatccggcct                                                                                                                >  6:546497‑M1/1‑113 (MQ=255)
                                      aCGCGTCAAGCGTCGCATCAGGCATTGTGCGCCAACTGCCGGATGCGGCGCGAACGCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGccgactgccggatgcggcgtgaacgccttatccggcct                                                                                                                <  2:546758‑M1/151‑39 (MQ=255)
                                       cgcgTCAAGCGTCGCATCAGGCATTGTGCGCCAACTGCCGGATGCGGCGCGAACGCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGccgactgccggatgcggcgtgaacgccggatccggccgg                                                                                                               >  5:1001986‑M1/1‑112 (MQ=255)
                                         cgTCAAGCGTCGCATCAGGCATTGTGCGCCAACTGCCGGATGCGGCGCGAACGCCTTATCCGGCCTACGGTTCGGCACAAACCTGAAGGCATGATAAGACGCGACAAGAGacgactcccggaagcggcgtgaacgccttatccggcctacg                                                                                                             >  7:398895‑M1/1‑110 (MQ=255)
                                            cAAGCGTCGCATCAGGCATTGTGCGCCAACTGCCGGATGCGGCGCGAACGCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGccgactgccggatgcggcgtgaacgccttatccggcctacggt                                                                                                           <  7:1443342‑M1/150‑44 (MQ=255)
                                              aGCGTCGCATCAGGCATTGTGTGCCAACTGCCGGATGCGGCGCGAACGCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGccgactgccggatgcggcgtgaacgccttatccggcctacggttcg                                                                                                        <  3:688202‑M1/151‑47 (MQ=255)
                                              aGCGTCGCATCAGGCATTGTGCGCCAACTGCCGGATGCGGCGCGAACGCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGccgactgccggatgcggcgtgaacgccttatccggcctacggttcg                                                                                                        <  2:1017572‑M1/151‑47 (MQ=255)
                                               gCGTCGCATCAGGCATTGTGCGCCAACTGCCGGATGCGGCGCGAACGCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGccgactgccggatgcggcgtgaacggcttgtccggcctacggggcgg                                                                                                       >  5:1987741‑M1/1‑104 (MQ=255)
                                                   cGCATCAGGCATTGTGCGCCAACTGCCGGATGCGGCGCGAACGCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGccgactgccggatgcggcgtgaacgccttatccggcctacggttcggcaca                                                                                                   <  2:1842841‑M1/151‑52 (MQ=255)
                                                   cGCATCAGGCATTGTGCGCCAACTGCCGGATGCGGCGCGAACGCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGAGacgactgccggatgcggcgagaacgacttaaacggcctaccgttcggcac                                                                                                    >  6:827097‑M1/1‑100 (MQ=255)
                                                      aTCAGGCATTGTGCGCCAACTGCCGGATGCGGCGCGAACGCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGccgactgccggatgcggcgtgaacgccttatccggcctacggttcggcacagac                                                                                                <  2:271155‑M1/151‑55 (MQ=255)
                                                         aGGCATTGTGCGCCAACTGCCGGATGCGGCGCGAACGCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGccgactgccggatgcggcgtgaacgccttatccggcctacggttcggcacagacttg                                                                                             <  7:285639‑M1/151‑58 (MQ=255)
                                                          ggCATTGTGCGCCAACTGCCGTATGCGGCGCGAACGCGTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGccgactgccggatgcggcgtgaacgccttatccggcctacggttcggcacagactt                                                                                              <  7:837975‑M1/149‑57 (MQ=255)
                                                                gtgCGCCAACTGCCGGATGCGGCGCGAACGCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGccgactgccggatgcggcgtgaacgccttatccggcctacggttcggcacagacttgtaggcat                                                                                      <  8:1622482‑M1/151‑65 (MQ=255)
                                                                gtgCGCCAACTGCCGGATGCGGCGCGAACGCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGccgactgccggatgcggcgtgaacgccttatccggcctacggttcggcacagacttgtaggca                                                                                       <  5:799930‑M1/150‑64 (MQ=255)
                                                                  gcgcCAACTGCCGGATGCGGCGCGAACGCCTTATCCGGCCTACGGTTCGGCACACACCTGTAGGCATGATAAGACGCGACAAGCGccgactgccggatgcggcgtgaacgccttatccggcctacggttcggcacagacttgtaggcatga                                                                                    <  5:1477759‑M1/151‑67 (MQ=255)
                                                                   cgcCAACTGCCGGATGCGGCGCGAACGCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGccgactgccggatgcggcgtgaacgccttctccggcctacggttcggcacagccgtgtaggcaggat                                                                                   >  1:1071166‑M1/1‑84 (MQ=255)
                                                                    gcCAACTGCCGGATGCGGCGCGAACGCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGAAAAGCGcagactgacggatgcggcgtgaacgccttataaggcctaaggttaggaacagacttgtaggcatgat                                                                                   >  8:154689‑M1/1‑83 (MQ=255)
                                                                       acctgCCGGATGCGGCGCGAACGCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGccgactgccggatgcggcgtgaacgccttatccggcctacggttcggcacagacttgtaggcatgataaga                                                                               <  5:360325‑M1/149‑72 (MQ=255)
                                                                       aaCTGCCGGATGCGGCGCGAACGCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGccgactgccggatgcggcgtgaacgccttatccggcctacggttcggcagagacttgtaggcatgataagc                                                                               >  3:938569‑M1/1‑80 (MQ=255)
                                                                          tGCCGGATGCGGCGCGAACGCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGccgactgccggatgcggcgtgaacgccttatccggcctacggttcggcacagccttgtaggcatgataagacgc                                                                            >  7:503944‑M1/1‑77 (MQ=255)
                                                                           gCCGGATGCGGCGCGAACGCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGccgactgccggatgcggcgtgaacgccttatccggcctacggttcggcacagacttgtaggcatgataagacgcg                                                                           >  7:1216309‑M1/1‑76 (MQ=255)
                                                                           gCCGGATGCGGCGCGAACGCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGccgactgccggatgcggcgtgaacgccttatccggcctacggttcggcacagacatgtaggcatgataagacgcg                                                                           >  8:1007708‑M1/1‑76 (MQ=255)
                                                                           gCCGGATGCGGCGCGAACGCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGAAAAGCGccgactcccggatgcggcgtgaacgccttatccggccgacggttcggcacagacttgtagtcatgataagacgcg                                                                           >  4:1812338‑M1/1‑76 (MQ=255)
                                                                           gCCGGATGCGGCGCGAACGCCTTATCCGGCCTACGGTTCGGAACAAACCTGTAGGCATGATAAGACGCGACAAGCGccgactgccggatgcggcgtgaacgccttatccggcctacggttcggcacagacttgtaggcatgataagacgc                                                                            <  5:251283‑M1/150‑75 (MQ=255)
                                                                             gggaTTCGGCGCGAACGCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGTTAAGACGCGACAAGCGccgactgccggatgcggcgtgaacgccttatccggcctacggttcggcacagacttgtaggcatgataagacgcgac                                                                         <  2:816354‑M1/150‑78 (MQ=255)
                                                                             cGGATGCGGCGCGAACGCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGccgactgccggatgcggcgtgaacgccttatccggcctacgggtcggcacagacgtgtaggcatgataagacgcgac                                                                         >  5:1841978‑M1/1‑74 (MQ=255)
                                                                              ggATGCGGCGCGAACGCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGccgactgccggatgcggcgtgaacgccttatccggcctaccgttcggcacagccttgtaggcaggataagacgcgac                                                                         >  3:867074‑M1/1‑73 (MQ=255)
                                                                               gATGCGGCGCGAACGCCTTATCGGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGccgactgccggatgcggcgtgaacgccttatccggcctacggttcggcacagacttgtaggcatgataagacgcgacaa                                                                       <  8:1735253‑M1/151‑80 (MQ=255)
                                                                                   gggcgcGAACGCCTTATCCGGCCTACGGTGCGGCACAAACCTGTAGGCATGATAAGACGCGACTCGCGccgactgccggatgcggcgtgaacgccttatccggcctacggttcggcacagacttgtaggcatgataagacgcgacaagcgt                                                                   <  5:12042‑M1/150‑84 (MQ=255)
                                                                                   cggcgCGAACGCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGccgactgccggatgcggcgtgaacgccttatccggcctacggatcggcaccgacatgtaggcatgataagacgcgacaagcgt                                                                   >  6:409681‑M1/1‑68 (MQ=255)
                                                                                     gcgcGAACGCCTTATCCGGCCTATGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGccgactgccggatgcggcgtgaacgccttatccggcctacggttcggcacagacttgtaggcatgataagacgcgacaagcgtcg                                                                 <  5:336265‑M1/151‑86 (MQ=255)
                                                                                      cgcgAACGCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGccgactgccggatgcggcgtgaacgccttatccggcctacggttcggcacagacttgtaggcatgataagacgcgacaagcgtcgc                                                                <  7:5975‑M1/151‑87 (MQ=255)
                                                                                       gcgAACGCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGcagactgccggatgcggcgggaacggcttatccgggctacgggtcggcacagacttgtaggcatgatacgacgcgccacgcgtcgcc                                                               >  7:1881637‑M1/1‑64 (MQ=255)
                                                                                        cgAACGCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGccgactgccggatgcggcgtgaacgccttatccggcctacggttcggcacagacttgtaggcatgataagacgcgacaagcgtcgcat                                                              >  5:540942‑M1/1‑63 (MQ=255)
                                                                                          aaCGCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGccgactgccggatgcggcgtgaacgccttatccggcctacgggtcggcacagacgtgtaggcatgataagacgcgacaagcgtcgcatc                                                             >  3:199241‑M1/1‑61 (MQ=255)
                                                                                            cGCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGccgactgccggatgcggcgtgaactccatatacggcctacggttcggcacagacttttaggcatgataagacgcgacaagcgtcgcatcagg                                                          >  4:869662‑M1/1‑59 (MQ=255)
                                                                                            cGCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGccgactgccggatgcggcgtgaacgccttatccggcctacggttcggcacagacttgtaggcatgataagacgcgacaagcgtcg                                                                 <  1:466257‑M1/144‑86 (MQ=255)
                                                                                            cGCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGccgactgccggatgcggcgtgaacgccttatccggcctacggttcggaacagacttgtaggcatgataagacgcgacaagcgtcgcatcagg                                                          >  8:668851‑M1/1‑59 (MQ=255)
                                                                                            cGCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGccgactgccggatgcggcgtgaacgccttatccggcctacggttcggaacagactggtaggcatgataagacgcgacaagcgtcgcatcagg                                                          >  5:1723888‑M1/1‑59 (MQ=255)
                                                                                             gCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGTCGCATCAGGCATTATGCGCCGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGTTCGGCACAGACTTGTAGGCATGATAAGAcgc                                                         >  6:1436768/1‑151 (MQ=255)
                                                                                               cTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGccgactgccggatgcggcgtgaacgccttatccggcctacggttcggcacagacttgtaggcatgataagacgcgacaagcgtcgcatcaggcat                                                       >  3:586714‑M1/1‑56 (MQ=255)
                                                                                               cTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGccgactgccggatgcggcgtgaacgccttatccggcctacgggtcgggacagacttgtaggcatgataagacgcgacaagcgtcgcatcaggcat                                                       >  1:1295869‑M1/1‑56 (MQ=255)
                                                                                                ttATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGccgactgccggatgcggcgtgaacgccttatccggcctacggttcggcacagacgtgtaggcatgataagacgcgacaagcgtcgcatcaggcatt                                                      >  3:1776828‑M1/1‑55 (MQ=255)
                                                                                                 tATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGccgactgccggattcggcgtgaacgccttatacggcctacggttcggcacagacttgtaggcatgataagacgcgacaagcgtcgcatcaggcatt                                                      <  4:1212543‑M1/150‑97 (MQ=255)
                                                                                                    ccGGCCTACGGTTCGGCACAAACATGTAGGCATGATAAGACGCGACAAGCGccgactgccggatgcggcgtgaacgccttatccggcctacggttcggcacagacttgtaggcatgataagacgcgacaagcgtcgcatcaggcattgtgc                                                  <  6:1153150‑M1/151‑101 (MQ=255)
                                                                                                     cGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGccgactgccggatgcggcgtgaacgccttatccggcctacggttcggcacagacttgtaggcatgataagacgcgacaagcgtcgcatcaggcattgtgcg                                                 >  4:1600405‑M1/1‑50 (MQ=255)
                                                                                                      ggCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGccgactgccggatgcggcgtgaacgccttatccggcctacggttcggcacagacttgtaggcatgataagacgcgacaagcgtcgcatcaggcattgtgcgc                                                >  4:1298402‑M1/1‑49 (MQ=255)
                                                                                                       gcgtacgGTTCGGCACAAACCTTTAGGCTTGATAAGAGGCGACAACCGccgactgccggatgcggcgtgaacgccttatccggcctacggttcggcacagacttgtaggcatgataagacgcgacaagcgtcgcatcaggcattgtgcgcc                                               <  4:1056801‑M1/148‑104 (MQ=255)
                                                                                                       gCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGccgactgccggatgcggcgtgaacgccttatccggcctacggttcggcacagacttgtaggcatgataagacgcgacaagcgtcgcatcaggcattgtgcgcc                                               >  7:1272734‑M1/1‑48 (MQ=255)
                                                                                                           aCGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAATCGccgactgccggatgcggcgtgaacgccttatccggcctacggttcggcacagacttgtaggcatgataagacgcgacaagcgtcgcatcaggcattgtgcgccaact                                           <  6:1586509‑M1/151‑108 (MQ=255)
                                                                                                            gggtTCTGCACAAACCTGTAGGCATGATAAGACGCGACAACCGccgactgccggatgcggcgtgaacgccttatccggcctacggttcggcacagacttgtaggcatgataagacgcgacaagcgtcgcatcaggcattgtgcgccaactg                                          <  6:215404‑M1/150‑109 (MQ=255)
                                                                                                             ggTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGTCGCATCAGGCATTATGCGCCGACTGCCGGATGCGGCATGAACGCCTTATCCGGCCTACGGTTCGGCACAGACTTGTAGGCATGATAAGACGCGACAAGCGTCGCATCa                                         <  2:1692563/151‑1 (MQ=255)
                                                                                                               ttCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGccgactgccgcatgcggcgtgaacgccttatccggcctacggttcgtcacagacttgtaggcatgataagacgcgacaagcgtcgaatcaggcattctgcgccaactgccc                                       >  2:371217‑M1/1‑40 (MQ=255)
                                                                                                                 cGGCACACACCTGTACGCAGGAGACCACGCCACAAGCGcctactgccggatgcggcgtcaacgccttatccggcctacggttcggcacagacttgtaggcatgataagacgcgacaagcgtcgcatcaggcattgtgcgccaactgccgga                                     <  5:1154641‑M1/151‑114 (MQ=255)
                                                                                                                     acaAACCTGTAGGCATGCTAAGACGCGACATGCGccgactgccggatgcggcgtgaacgccttatccggcctacggttcggcacagacttgtaggcatgataagacgcgacaagcgtcgcatcaggcattgtgcgccaactgccggatgcg                                 <  7:1572481‑M1/151‑118 (MQ=255)
                                                                                                                         aCCTGGAGGCATGATAAGACGCGACAAGCTccgactgccggattcggcgtgaaggccttatccggcctacggttcggcacagacttgtaggcatgataagacgcgacaagcgtcgcatcaggcattgtgcgccaactgccggatgcggcgt                             <  3:1347262‑M1/151‑122 (MQ=255)
                                                                                                                          ccTGTAGGCATGATAAGACGCGACAAGCGccgactgccggatgcggcgtgaacgccttatccggcctacggttcggcacagacttgtaggcatgataagacgcgacaagcgtcgcatcaggcattgtgcgccaactgccggatgcggcgtg                            >  1:281509‑M1/1‑29 (MQ=255)
                                                                                                                            tGTAGGCATGATAAGACGCGACAAGCGccgactgccggatgcggagtgaacgccttatccggcctacggatcgtcacagactagtaggcatgataatacgcgacaagcgtctcatcaggcattgtgcgaaaactgcaggatgcggcgtga                           >  6:729155‑M1/1‑27 (MQ=255)
                                                                                                                             gTAGGCATGATAAGACGCGACAAGCGccgactgccggatgcggcgtgaacgccttatccggcctacggttcggcacagacttgtaggcatgataagacgcgacaagcgtcgcatcaggcattgtgcgccaactgccggatgcggcgtgaac                         >  8:476835‑M1/1‑26 (MQ=255)
                                                                                                                                ggCATGATAAGAGGCGACAAGCGcctactgccggatgcggcgtgaacgccttatccggcctacggttcggcacagacttgtaggcatgataagacgcgacaagcgtcgcatcaggcattgtgcgccaactgccggatgcggcgtgaacgcc                      <  4:792955‑M1/151‑129 (MQ=255)
                                                                                                                                 gCATGATAAGAGGCGAGAAGCGccgactgccggatgctgcgttaacgccttatccggcctacggttcggcacagacttgtaggcatgataagacgcgacaagcgtcgcatcaggcattgtgcgccaactgccggatgcggcgtgaacgcct                     <  4:1528558‑M1/151‑130 (MQ=255)
                                                                                                                                      aTAAGACGCGACAAGCGccgactgccggatgcggcgtgaacgccttatccggcctacggttcggcacagacttgtaggcatgataagacgcgacaagcgtcgcatcaggcattgtgcgccaactgccggatgcggcgtgaacgccttatcc                <  3:1009980‑M1/151‑135 (MQ=255)
                                                                                                                                       gaagACGCGACAACCGccgactgccggatgcggcgtgaacgccttatccggcctacggttcggcacagacttgtaggcatgataagacgcgacaagcgtcgcatcaggcattgtgcgccaactgccggatgcggcgtgaacgccttatccg               <  3:347416‑M1/150‑136 (MQ=255)
                                                                                                                                        aaGACGCGACAAGCGccgactgccggatgcggcgtgaacgccttatccggcctacggttcggcacagacttgtaggcttgataagacgcgacaagcgtcgcatcaggcattgtgcgccaactgccggatgcggcgtgaacgccttatccgg              <  1:1784740‑M1/151‑137 (MQ=255)
                                                                                                                                        aaGACGCGACAAGCGccgactgccggatgcggcgtgaacgccttatccggcctacggttcggcacagacttgtaggcatgataagacgcgacaagcgtcgcatcaggcattgtgcgccaactgccggatgcggcgtgaacgccttatccgg              >  2:685341‑M1/1‑15 (MQ=255)
                                                                                                                                        aaGACGCGACAAGCGccgactgccggatgcggcgtgaacgccttatccggcctacggttcggcacagacttgtaggcatgataagacgcgacaagcgtcgcatcaggcattgtgcgccaactgccggatgcggcgtgaacgccttatccgg              >  7:1705162‑M1/1‑15 (MQ=255)
                                                                                                                                        aaGACGCGACAAGCGccgactgccggatgcggcgtgaacgccttatccggcctacggttcggcacagacttgtaggcatgataagacgcgacaagcgtcgcatcaggcattgtgcgccaactgccggatgcggcgtgaacgccttatccgg              <  3:18625‑M1/151‑137 (MQ=255)
                                                                                                                                        aaGACGCGACAAGCGccgactgccggatgcggcgtgaacgccttatccggcctacggttcggcacagacttgtaggcatgataagacgcgacaagcgtcgcatcaggcattgtgcgccaactgccggatgcggcgtgaacgccttatccg               <  6:1646251‑M1/150‑136 (MQ=255)
                                                                                                                                         aGACGCGACAAGCGccgactgccagatgcggcgtgaacgccttatccggcctacggttcggcacagacttgtaggcatgataagacgcgacaagcgtcgcatcaggcattgtgcgccaactgccggatgcggcgtgaacgccttatccggc             >  4:143926‑M1/1‑14 (MQ=255)
                                                                                                                                          gACGCGACAAGCGccgactgccggatgcggcgtgaacgccttatccggcctacggttcggcacagacttgtaggcatgataagacgcgacaagcgtcgcatcaggcattgtgcgccaactgccggatgcggcgtgaacgccttatccggcc            <  5:1893282‑M1/151‑139 (MQ=255)
                                                                                                                                           aCGCGACATGCGccgactgcgggatgcggcgttaacgccttatccggcctacggttcggcacagacttgtaggcatgataagacgcgacaagcgtcgcatcaggcattgtgcgccaactgccggatgcggcgtgaacgccttatccggcct           <  8:1915590‑M1/151‑140 (MQ=255)
                                                                                                                                            cccgacAAGCGccgactgccggatgcggcgtgaacgccttatccggcctacggttcggcacagacttgtaggcatgataagacgcgacaagcgtcgcatcaggcattgtgcgccaactgccggatgcggcgtgaacgccttatccggccta          <  3:1491333‑M1/149‑141 (MQ=255)
                                                                                                                                             gcgACAAGCGccgactgccggatgcggcgtgaacgccttatccggcctacggttcggcacagacttgtaggcatgataagacgcgacaagcgtcgcatcaggcattgtgcgccaactgccggatgcggcgtgaacgccttatccggcctac         <  5:1382765‑M1/151‑142 (MQ=255)
                                                                                                                                              cgACAAGCGccgactgccggatgcggcgtgaacgccttatccggcctacggttcggcacagacttgtaggcatgataagacgcgacaagcgtcgcatcaggcattgtgcgccaactgccggatgcggcgtgaacgccttatccggcctacg        >  8:790967‑M1/1‑9 (MQ=255)
                                                                                                                                                  aaGCGccgactgccggatgcggcgtgaacgccttatccggcctacggttcggcacagacttgtaggcatgataagacgcgacaagcgtcgcatcaggcattgtgcgccaactgccggatgcggcgtgaacgccttatccggcctacggttc    >  2:1126249‑M1/1‑5 (MQ=255)
                                                                                                                                                  aaGCGccgactgccggatgcggcgtgaacgccttatccggcctacggttcggcacagacttgtaggcatgataagacgcgacaagcgtcgcatcaggcattgtgcgccaactgccggatgcggcgtgaacgccttatccggcctacggttc    >  2:1520895‑M1/1‑5 (MQ=255)
                                                                                                                                                   aGCGccgactgccggatgcggcgttaacgccttatccggcctacggttcggcacagacttgtaggcatgataagacgcgacaagcgtcgcatcaggcattgtgcgccaactgccggatgcggcgtgaacgccttatccggcctacggttcg   <  5:641342‑M1/151‑148 (MQ=255)
                                                                                                                                                    gcgccgactgccggatgcggcgtgaacgccttatccggcctacggttcggcacagacttgtaggcatgataagacgcgacaagcgtcgcatcaggcattgtgcgccaactgccggatgcggcgtgaacgccttatccggcctacggttcgg  >  2:1276667‑M1/1‑3 (MQ=255)
                                                                                                                                                      |                                                                                                                                                    
CGGCCTACGGTTCGGCACAGACTTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATTGTGCGCCAACTGCCGGATGCGGCGCGAACGCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGTCGCATCAGGCATTATGCGCCGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGTTCGGCACAGACTTGTAGGCATGATAAGACGCGACAAGCGTCGCATCAGGCATTGTGCGCCAACTGCCGGATGCGGCGTGAACGCCT  >  DH1/3898361‑3898659

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.