Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | DH1 | 4,122,124 | 0 | C | A | 26.0% | 434.0 / 21.5 | 297 | intergenic (‑15/+22) | ECDH1_RS20430/ECDH1_RS20435 | tRNA‑Gly/tRNA‑Gly |
Reads supporting (aligned to +/- strand): ref base C (130/52); new base A (63/1); total (241/56) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 6.25e-07 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 301 total aligned reads displayed.
TACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGCATTTCTGCGTCGTTACGGGA > DH1/4121978‑4122273 | aaacAACGGAGCTATTCGCTCTTGGGTGGTGTGTGCATTACAGCACTTTCATATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTg < 6:572633/148‑1 (MQ=17) aaCTGTGCTATTCCCGTCTGGGTGGTCTGTTCATTACAGTTCTTTCATATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTgcagc < 6:281371/151‑1 (MQ=17) gAGCTATTCCCGCTTGGGTGGTCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGCGACGCGCACTCGCGACCCCGACCTTGGCAAGGTCGTGGTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTTCTTTGCAGCACtt > 7:1742841/1‑151 (MQ=255) aGCTATTCCCGCTTGGGTGGTCTGTGCCTTACAGCACTTTAAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCCACCCCCAACTTGGCAAGGTAGTGCTCTACCAACAGAGATAATCCCAGATCGGTCGTCTATGCATTgcaggaaatt > 8:1926621/1‑145 (MQ=14) ccTATCCCCGCTTGGGCGCTCTGTTCCTTAAAGAACTATAACATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACtttt < 8:907208/150‑1 (MQ=14) cTATTCCCGCTTGGGTGGTCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGGTGTGGAGGACtttt > 4:945765/1‑150 (MQ=255) attcgcgagtGGGGGGTGTGTGCCTTACATAACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTTc < 3:38954/140‑1 (MQ=17) aTTCCCGCTGGGGGGGTCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTTc < 3:973724/149‑1 (MQ=255) tcgcGCTTGGGTGGTCTGTTTATTTCAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCaaa < 8:1207820/147‑1 (MQ=255) ccGCTTGGGTGGTCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTTGGTGGTCTTTTATTTTGAGCAATTTTCAAAttt > 6:1334343/1‑151 (MQ=14) cGCTTGGGTGGTCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGAGGTATGTGCTTTTAAGCAATTTTCAAAtttt > 7:1270089/1‑151 (MQ=255) gCTTGGGTGGTCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTGGGTGGTCTGTGAGGTGGAGCACTTTTCAAAttttt > 6:1898770/1‑150 (MQ=255) ttGGGTGGTCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTCGGTGGTCTGTTCTTTTGAGAAATTTTCAAAtttttgc > 3:681014/1‑148 (MQ=17) tggttcttgtgtaacTTTCAGCACTATAACAATTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCAAATTTTGGa < 5:628165/136‑1 (MQ=14) gggggggTGTGTCCCTTACATGACTTTCACATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCAAATTTTgg < 5:1615504/148‑1 (MQ=17) gggTGGTCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTTCTGTGCAGCACTTTTCAAATTTTGGAGc > 8:1117585/1‑151 (MQ=255) tggtCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTGCGTGGTATGTGATGTGCAGGACTTTTCAAATTTTGGCGCggg > 4:376571/1‑151 (MQ=17) tggtCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTAGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGTTGGTCTTTTTTTTTTAGGAATTTTCAAATTTTAGATCggg > 3:238098/1‑151 (MQ=17) ggctgtgtgCATTATATCCCTATCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCggg < 7:272262/146‑1 (MQ=14) ggtCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTATGTTGTTTGGAGCACTTTTCAAATTTTGGAGCggg > 6:184554/1‑150 (MQ=255) gtCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTGCGTGGTCTGTGGGGTGGCGCACTTTTCGAATTTAGGAGCcggt > 7:563631/1‑149 (MQ=17) gtCTGGCCCTTACATTTCTTTCATAATTTGGACCGGGAAACGAGACTCGAACTCGCGACCCCGCCCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGGCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGaa < 5:146939/151‑1 (MQ=14) tCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGTTCTGTGGTTTTCAGAAATTTTCAAATTTTTGCGCGGGaa > 2:553018/1‑150 (MQ=17) tCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGCGTGGTCTTTTATATGGAGCAATTTTCAAATTTTGGAGCGGGaa > 2:586326/1‑150 (MQ=18) cTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTTGTGTGGAGGAATTTTCTAATTTTGGAGTGGGaacc > 1:914545/1‑149 (MQ=17) cTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCGGTGGAGCACTTTTCAAATTTTGGAGCGGGAAAc > 3:846992/1‑151 (MQ=255) tgtgCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTGGGTCGTCTGTTATTTGGAGAACTTTTCGAATTTGGGAGGGGTAAACg > 5:1419323/1‑151 (MQ=17) gttcatttcatgtatttCAAATTTTGGAGGGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGaaa < 8:1527399/134‑1 (MQ=14) gtgCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGACGTATGTGGTGTGGAGCACTTTTCAAATTTTGGAGGGGGAACCgc > 5:1734852/1‑150 (MQ=17) cgccagtACAGGACCTTCAAAATTTCGAGCCGGAAACGAGACTCGAACTCGCGACCCCGACCATGGCAAGGGCGAGCTCTACCAACTGAGCTATACCCGCTTGGGTGGGCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACg < 5:1887568/144‑1 (MQ=14) ccTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGATTTGCAGCACTTTTCAAATTTTGGAGAGGGAAACGAGAc > 8:168267/1‑151 (MQ=255) ccTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTATGTGGTTTGGAGCACTTTTCAAATTTTTGAGCCGGAAACgcgcc > 3:1472952/1‑147 (MQ=17) ccTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGAGGTCTGTTGTTTGAAGCACTTTTCAAATTTTGGAGCGGGAACCGCGAc > 1:636269/1‑151 (MQ=17) ccTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGCGTCGTCTGTTGTGTGAAGCAATTTTCAAATTTAGGAGAGGGAAACgagcc > 6:1957868/1‑149 (MQ=17) cTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTCGTATGTTATTTTAAGAAATTTTCAAATTTTTGAGAGGTAAACGAGAcg > 2:855454/1‑150 (MQ=17) ttACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGTTCGTCTGTTATATTAAGCACTTTTCAAATTTTGGAGAGGGAACCGAGACTc > 6:406329/1‑151 (MQ=17) ttACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTGCGTGGTCTGTTATTTGAAGAACTTTTCAAATTTTGGAGAGGGAAACGAGACTc > 2:1321983/1‑151 (MQ=17) aCTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTTCTTGGTCTGTGAGATGAAGTAATTTTCGAATTTTCGCGTCGGAAACgacccgcgaaaac > 1:1023652/1‑139 (MQ=11) ttCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTCGTCTGTGTTGTGGAGGACTTTTCAAATTTTGGAGAGGGAACCGAGACTGGATCTcgcg > 1:1507070/1‑150 (MQ=14) cAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGCCTCGAACTAGCGAcc > 4:1838061/1‑151 (MQ=255) aaTTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTATGTGGGTTGGCGGACTTTTCGAATTTTGGAGAGGGTAACGCGCGTCGATCTAGCGAccac > 7:1623666/1‑149 (MQ=14) aTTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGCTTGGTATGTTATATTAAGGACTTTTCAAATTTATGAGACGTAAACGAGACTCCACCTCGACAccc > 8:691228/1‑149 (MQ=11) tttGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTACGAGGTCTTTTATATGAAGAAATTTTCAAATTTATGAGACGGAAACGAGACTCGATCTAACGAcaaagc > 4:229020/1‑145 (MQ=14) tttGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTGGTTGGTATTTTGTATGACGCACTTTTCACATTTATGAGGGGGTACCGGGACGCGaggtggcgagaactcc > 6:1198163/1‑136 (MQ=2) tGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGAGGTATTTTTTGTGGAGCACTTTTCAAATTTTTGAGCGGGAAACGAGTCTCGAAATCCCGAcaact > 7:954025/1‑143 (MQ=14) cGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGAGGTCTGTGCTATGAAGAACTTTTCAAATTTTGGAGAGGGAAACGCAACTCGAAATCGCGACCCCGACCtagcc > 6:74760/1‑146 (MQ=14) ggAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGCTTGGTCTGTGATATGCAGAAATTTTCAAATTTTTGAGCGGGAAACGAGACTCGAAATAGCGACCACGAACtacgca > 8:62684/1‑144 (MQ=14) aaaCGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGCCCTTGGCAAGGt > 7:1922372/1‑151 (MQ=38) aaaCGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGATTTGGAGAACTTTTCAAATTTTTGAGAGGTAAAGGAGACTCGTAATAGCGACCACGAGATAGGCAAGGt > 4:730079/1‑151 (MQ=14) cGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGGAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGCCCTTGGCAAGGTCGt > 5:376028/1‑151 (MQ=255) cgagtcgacccctcgACCCCTACATTGGAAAGGTCGTTATCTAAAAACTTCGCTATTCCCTTTTGGGGGGGGTGTTGTTTTAAGCAATTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGc < 8:1952892/138‑1 (MQ=2) aCTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGTTGGTATGTGATGTGAAGCGCTGTGCAAATTTTGGAGCGCGAACCGACACTGGACCTAGCCACACAGCCCTTGGCAAAGTAGTGctc > 3:1694312/1‑151 (MQ=2) cTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGctct > 3:640011/1‑151 (MQ=38) cGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGTTATGTTGTTTGGAGGAATTTTCCAATTTTGGAGAGGTAACCGGGCGTCGTACTAGCGACCCCGCGCTTGGCAAGCTGGTGCGCTa > 3:1569744/1‑150 (MQ=9) cGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGCGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTAc > 5:1231852/1‑151 (MQ=38) gAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAACCGAGCCTCGAACTCGCGACCCCGACCTTGGGAAGGTCGTGCGCTAc > 5:1832499/1‑150 (MQ=255) cTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGATTTGAAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTAGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAAc > 2:523588/1‑151 (MQ=255) cTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTGGGTGGTCTGTGGTTTGCAGGACTTTTCAAATTTTGGAGCGGGAACCGCGCCTCGAACTCGCGACCCCGCGCTTGGCAAGGTCGTGCTCTACCagc > 1:31072/1‑149 (MQ=14) ccgACCCCGACCTTTGCAAGGTCTTGCTCTACCAACTCAGCTATTCCCGCTTGGGTTGTATTTGCTTTGCATCAATTTTCAAATTTTGTAGCGGGAAACGAGACTCTAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGa < 8:108166/150‑1 (MQ=14) gACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGCTCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGCCAAGGTCGTGCGCAACCAACTGAGc > 7:374820/1‑151 (MQ=255) aCCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCt > 3:597444/1‑151 (MQ=38) aCCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGATTTGAAGAACTTTTCAAATTTTGGAGACGGAAACGACACTCCAAAACGCGACAAAGAACTGGGCAAGCTCGTCCTCAACCAACTg > 6:1671126/1‑147 (MQ=14) aCCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGCTTCGTCTGTGATTTGCAGAAATTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTAGCGACCCCTACGTTCCAAAGCACCTGCTCTACAAACTGAGCt > 4:1411250/1‑151 (MQ=14) ccccGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTAGGTCGTCTGTTATTTGAAGCACTTTTCAAATTTTGGAGAGGTAAAGGAGACTCCAACTAGCGACCCCTCGATTCGCAAGGTCGTGCTCTAACAACTGAgat > 6:1477921/1‑148 (MQ=14) ccGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTATGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGCCTCGAAGTCGCGACCCCGACCTGGGCAAGCTCCAGCGCTACCAACTGAGCTAtt > 1:1954762/1‑151 (MQ=14) gACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTGGTTGGTCTTTTAGTTGTAGAAATTTTCACATTTTTGAGAGGGAAAGGCGCCGCGAACTCGCGACAACGACCTGGGACAGCACCTGCTCTACCAACTTAGCTATTcc > 3:288147/1‑151 (MQ=2) cTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGGTTTGAAGCAATTTTCAAATTTTTGAGAGGGAAACGAGACTCGAAAAAGCGACCCCGACATTGCAAAGGACGTGCTCTAAAAACTGAGATATTca > 8:412855/1‑147 (MQ=14) tGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGGAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACAAACTGAGGTATTCCCGCGt > 7:1206872/1‑151 (MQ=255) aaGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGGTTTGCCGCACTTTTCAAATTTTGGCGCGGGAACCGAGACTCGAACTCGCGACCCCGACCTTGCCAAGGTCGTGCGCTACCAAGTGAGCTATTCCCGCGtact > 5:1181072/1‑150 (MQ=14) aGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTCGTATGTTATTTGGAGGAATTTTCAAATTTTTGAGCGGTAAACGAGACTCGAACTCGCGACCACGAGCTTCGCAAGGTCGGGCTCTACAAACTGAGCTATTCCAGCGtacgac > 3:1362070/1‑151 (MQ=14) ggTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGCCTCGAACTCGCGA‑CCCGACCTTGGCAAGGTCGTGCTCTACAAACTGAGCTATTCCCGCGTACTACtt > 7:1090871/1‑151 (MQ=255) ttcttGCTCTACCTACTTTGCTATTCCGGCTTGGGTGGTTTGTGCTTTTTATTTGTTTTAAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTactact < 4:641549/146‑1 (MQ=14) gTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTATGTGGTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCACGACCTTCGCAAGGTCGTGCTCTACCAACTGAGATATTCCCGCGTACTACtt > 7:622773/1‑151 (MQ=255) cGTGCTCTACCAACTGAGCTATTCCCGCTTGCGTGGTCTGTTATTTGAAGAAATTTTCAAATTTAGGAGAGGGAACCGAGACTCGAACTAACGACCACTACCTAGCCAAGCTCCAGCACTAACAACTGAGATATTCCAGATTACTACTTa > 4:1551242/1‑150 (MQ=9) gTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCTCCCTAGGCAAGGTCGAGCGCTACCAACTGAGCTATTCCCGCGTACTACTGAAt > 2:294466/1‑151 (MQ=14) gTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAAt > 5:234032/1‑151 (MQ=255) gTGCTCTACCAACTGAGCTATTCCCGCTTGCGTGGTATGTGCTTTTCAGCACTTTTCAAATTTTGGAGAGGGAAACGAGACACGAACTCGCGACCCCGACCTTGGAAAGGTCGTGCTCTACCAACTGAGATATTCCCGCGTAGTACTTAAt > 2:646790/1‑151 (MQ=14) tctACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTg > 1:1629394/1‑151 (MQ=255) tctACCAACTCCGCTATTCCCGCTTGGGTGGGCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGTAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAAtttt < 3:1138236/150‑1 (MQ=255) cccaccgccccctgcccGCGTGGGGGGGCCGGGCCCTGCATCAATTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCttt < 3:337684/137‑1 (MQ=17) ccAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCttt > 3:152435/1‑151 (MQ=255) ccAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTCTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCttt > 1:553417/1‑151 (MQ=255) cAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCTCGTACTACTTAATTTTGCttt > 2:1409136/1‑150 (MQ=255) cAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTc > 7:854146/1‑151 (MQ=255) cTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGt > 2:1048102/1‑150 (MQ=255) tGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTa > 2:933215/1‑150 (MQ=255) gCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAAttt > 8:1742816/1‑151 (MQ=255) cTATTCCCGCTTGGGTGGTCTGTGCCTTACAGCAC‑TTTAAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTACTTCTTAAtttatgttaagaaatttt > 2:1776434/1‑135 (MQ=11) tATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTc > 4:1704904/1‑151 (MQ=255) tCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGc > 3:1757916/1‑150 (MQ=255) gCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGCAtttg > 7:1536467/1‑150 (MQ=255) gCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGCATTTc > 5:794801/1‑151 (MQ=255) tGGGTGGTCTGTGCCTTACAGCAC‑TTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTGCTTGTTATTTTTTGTTTCGTAATTTTCAAATTTTTGcg > 5:176958/1‑151 (MQ=11) gggTGGTCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGCATTTCTGcg > 5:52272/1‑151 (MQ=255) gtCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGCATTTCTGCGTCGtt > 7:188955/1‑151 (MQ=255) tgtgCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGCATTTCTGCGTCGTTACg > 6:1406744/1‑151 (MQ=255) tgtgCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGCATTTCTGCGTCGTTACg > 8:325445/1‑151 (MQ=255) ggggCTTGGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGCATTTCTGCGTCGTTACg < 7:689652/148‑1 (MQ=255) tgCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTCCCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGCATTTCTGCGTCGTTACggg > 5:950464/1‑151 (MQ=255) tgCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGCATTTCTGCGTCGTTACggg > 8:52754/1‑151 (MQ=255) | TACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGCATTTCTGCGTCGTTACGGGA > DH1/4121978‑4122273 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |