| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | DH1 | 613,770 | 0 | C | A | 29.3% | 277.3 / 55.2 | 261 | intergenic (+631/+392) | garK/yhaC | glycerate 2‑kinase/pentapeptide repeats‑related protein |
| Reads supporting (aligned to +/- strand): ref base C (130/27); new base A (64/1); total (233/28) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.29e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 268 total aligned reads displayed.
ATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTT‑TTACTTTTGGAGGGGCAG‑AAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGTACGTAATAAACCGTTCCGGCGGGTTTC > DH1/613624‑613919 | aaagaaagCGGCTTATCGGTCAGTTTGACCTGGTTTACGTAAAAAACCGGTACGGCGGGTTTGTGATTGTTAGGTGGGAGAAAGAAGAGTCACTAGACAAGACACAGGTCAGAAAAGAGAGGGGCTTATTCGTCATTTAAAACTGttttcc > 7:916603/1‑149 (MQ=2) aagCGGCTTATCGGTCAGTTTCACCTGGTTTACGTAAAAACCCGATTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAATATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCTGCTTATAGGTAAGTTTAACCTGATTTACGTaa > 8:673348/1‑150 (MQ=11) ggCTTATCGGTCAGTTTCACCTGGTTTACGTAAAAACCCGATTCGGCGGGTTTTTGATTTTTGAGTGCCAGAAATATGAAACACATTCCACGACACTATAAAAAAAAGAAAACGACATATCGCTCATTTAAACATTTTATACGtaataaac > 6:675222/1‑149 (MQ=2) atATCGGTCAGTTTCACCTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCCGATAGTATCAGCAGATTTACG‑AAAAAcccagc > 5:818154/2‑148 (MQ=11) aTCGGTCAGTTTCACCTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCtt > 7:708011/1‑151 (MQ=35) tCGGTCAGTTTCACCTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGTTGTACGTAGAAAccgccgac > 5:421842/1‑145 (MQ=255) ggTCAGTTTCACCTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGTTTTACGTAAAAAACCGCTGcgg > 1:514600/1‑151 (MQ=255) tCAGTTTCACCTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGTGGCAGAAAGATGAATGACTTTCCACGACACTAAACACAAAAGAAAGCTGCTTATCGGTAAGTTTAAAATGTTATACGTAAAAACCATCTgcggcg > 8:1950580/1‑151 (MQ=11) tCAGTTTCACCTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTGACCTGATTTACGTAAAAACCCGGTgcggcg > 5:968623/1‑151 (MQ=255) cAGTTTCACCTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTTcggcgg > 1:1488896/1‑151 (MQ=35) gTTTCACCTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGt > 7:1545190/1‑151 (MQ=35) tttCACCTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATTAATCACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTAACCTGATTTACGTAAAAACCCGATACGGCGGGtt > 2:65331/1‑151 (MQ=11) ttCACCTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTAACCTGTTTTACGTAATAAACCGATAcggagatatt > 2:51186/1‑144 (MQ=11) tCACGTGATTTAGGTAAAAACCGGCTTCGTCTTTTTTTTTTTTTTTTAGGGGGAGAACGTTGATTTACTGTAAACTACACTATATTCAATATAAAGAGGCTTTTCGGTTATTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGttt < 4:912654/150‑1 (MQ=2) tCACCTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTAACCTGTTTTACGTAAAAAACCGATACGGCGGGttt‑t > 6:87378/1‑151 (MQ=255) cACCTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGtttgt > 7:462567/1‑149 (MQ=25) cACCTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTGCGGCGGGtttgt > 3:338151/1‑149 (MQ=25) cACCTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTAACCTGTTTTACGTAAAAAACCGATACGGCGGGtttg > 2:842215/1‑149 (MQ=255) aCCTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTAACCTGTTTTACGTTATAACCCGCTGCGGCGGGtttat > 1:849523/1‑148 (MQ=255) aCCTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTAACCTGTTTTACGTAAAAAACCGATTCGGCGGGtttaa > 4:1351383/1‑148 (MQ=255) ccTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAACGGGGGATATCGGGGAGGTTCTCCTGTGTTACGTAAAAACCCGCTTCGGCGTCttt‑tt > 1:1811751/1‑149 (MQ=11) ccTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTAACCTGTTTTACGTAAAAAACCGATACGGCGGGtttatg > 8:1543275/1‑147 (MQ=255) cTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTGCGGCGGGtttgaact > 4:398579/1‑146 (MQ=255) cTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTAACCTGATTTACGTAAAAACCCGATTCGGCGGGtttgaaat > 8:1925680/1‑146 (MQ=255) tGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTGACCTGTTTTACGTAAAAACCCGTTGCGGCGGGtttaagatt > 7:791166/1‑145 (MQ=255) tttACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTGCGGCGGGtttgaccttttt > 6:348995/1‑142 (MQ=255) ttACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTGACCTGTTTTACGTAAAAACCCGGTGCGGCGGGGTT‑TGACTGTTgc > 7:549630/1‑150 (MQ=11) ttACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTGACCTGTTTTACGTAAAAACCCGGTGCGCCGGGTTT‑GTGCttgttg > 7:1813607/1‑147 (MQ=11) ttACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTGACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTT‑GTGCTTGTgg > 1:146666/1‑151 (MQ=9) ttACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTAACCTGATTTACGTAAAAACCCGATACGGCGGGtttatgatttttg > 8:1734840/1‑141 (MQ=11) tACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTGACCTGTTTTACGTAAAAACCCGGTGCGGCGGGtttgtgattgtgg > 7:1329737/1‑140 (MQ=11) gTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTAACCTGATTTACGTAAAAAACCGATACGGCGGCtttaacattatatagg > 2:1076404/1‑137 (MQ=11) tAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTAACCTGTTTTACGTAAAAAACCGCTGCGGCGGGTTTATTATTTTTgagtgc > 2:1315753/1‑146 (MQ=11) aaaaaCCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTGTTTTACGTAAAAAACCGCTACGGCGGGTTT‑GTACTTTTGGAgtggg > 7:105486/1‑150 (MQ=255) aaaaaCCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCGTATCGGTCAGTTTCACCTGTTTTACGTAAAAAACCGCTTCGGCGGGGTT‑GTGCTTGTGGAgtggg > 3:857160/1‑150 (MQ=11) cccGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTAACCTGTTTTACGTAATAAACCGATACGTCGGGTTT‑GTAATTTTTGAggccgagtt > 1:249000/1‑143 (MQ=11) cGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTGACCTGTTTTACGTAAAAAACCGATTCGGCGGGTTT‑TTACTTTTTGAGTGGCatatatt > 3:796769/1‑145 (MQ=11) cGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTAACCTGTTTTACGTAAAAACCCGATTCGGCGGGTTT‑GTTCTTTTTGAGTGGGAG‑aaat > 1:937848/1‑149 (MQ=11) gCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTGACCTGTTTTACGTAAAAACCCGGTTCGGCGGGTTT‑TTACTTTTGGAGGGGCAG‑aa > 1:769473/1‑147 (MQ=25) gCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTAACCTGTTTTACGTAAAAACCCGATACGGCGGGTTT‑TTTATTTTTGAGTGGCAT‑TAAGa > 3:50833/1‑150 (MQ=11) ttCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTT‑GTCCTTTTGGAGGGCCAG‑AAAGatg > 7:1620136/1‑150 (MQ=16) ttCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTAACCTGATTTACGTAAAAACCCGCTGCGGCGGGTTT‑GTACTTTTGGAGTGGCAG‑AAAGatg > 5:1935222/1‑150 (MQ=255) tCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTAACCTGATTTACGTAAAAAACCGATACGGCGGGTTT‑AAAATTTTTGAGGGCCattaattaaa > 4:1151364/1‑141 (MQ=11) ggcggGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTGACCTGTTTTACGTAAAAAACCGATACGGCGGGTTT‑GAACTTTTTGAGTGGCAT‑ATAGaagaat > 8:1481563/1‑150 (MQ=11) ggcggGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTGATTTACGTAAAAAACCGATACGGCGGGTTT‑ATAATTTTTGAGTGGCAT‑AAATatgagac > 8:820824/1‑148 (MQ=11) gcggGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTAACCTGATTTACGTAAAAAACCGATACGGCGGGTTT‑ATACTTTTTGAGTGCCAT‑AAAGatgaaac > 8:1273341/1‑148 (MQ=11) cggGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTGATTTACGTAAAAACCCGATTCGGCGGGTTT‑TTACTTGTTGAGTGGCAG‑AAATatcaaacac > 8:566192/1‑147 (MQ=11) gTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTGTTTTACGTAAAAACCCGGTGCGGCGGGTTT‑GTACTTTTGGAGGGGCAG‑AAAGatgagtgcgtgg > 3:1501615/1‑146 (MQ=11) gTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTAATCGGTCAGTTTAACCTGATTTACGTAATAAACCGATACGGCGGGATT‑CAAATTTTTGA‑GTGCAGAAAAGAAGAAAGACta > 6:925894/1‑149 (MQ=14) tttGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATGCGCAAAAGAAAGCGCCTTATAACTCAGGTAACCCAGGATTACGTAAAAACCCGGTTGGGCGGGTAA‑TAAATTTTGGAGGGGCAG‑ACAGATGAATGACTGTccc > 7:651968/1‑150 (MQ=2) tttGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTAACCTGATTTACGTAAAAACCCGATACGGCGGGTTT‑TAACTTGTTGAGTGCCAT‑AAATAACAAAGACTGTcc > 6:1179709/1‑150 (MQ=11) ttGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTAACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTT‑TTAATTTTTGAGTGGGAT‑ATAGAACAATGACTTTCCAc > 2:552307/1‑151 (MQ=11) gAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTAACCTGTTTTACGTAAAAAACCGATGCGGCGGGTTT‑AAAATTTTTGAGTGGCAG‑AAATAATAAAGACATTCGACGacacg > 8:495515/1‑147 (MQ=11) cAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTGATTTACGTAAAAACCCGCTTCGGCGGGTTT‑GAACTTTTTGAGGGGCAG‑AAATAAGAAACACTGTCGACGACACtcacggatc > 5:1730591/1‑142 (MQ=11) aaaGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTAACCTGTTTTACGTAAAAACCCGCTGCGGCGGGTTT‑TTCCTTTTGGAGGGCCAG‑AAAGAAGAGTGCCTGTCCACGACACGATAGCaaaa > 6:751440/1‑148 (MQ=11) aaGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTGTTTTACGTAAAAACCCGGTTCGGCGGGTTT‑TTGATTTTTGAGTGGGAT‑AAATAAGAAAGCGATTCGACGACACTATAACAAaaaga > 3:256017/1‑150 (MQ=11) aGATGAATGACTGTCCACGACGCTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTT‑TTACTTTTGGAGGGGCAG‑AAAGATGAATGACAGACGAAGACACTAGACAaaaaaaaa > 2:1590112/1‑150 (MQ=11) aGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTGACCTGTTTTACGTAAAAACCCGCTGCGGCGGGTTT‑TTACTTTTTGAGTGGCAG‑AAAGATCTATCACTGTCCCCGACACTCTACGCAaatgaa > 5:123691/1‑150 (MQ=11) atgaatgaCTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTGCGGCGGGTTT‑TTCCTTTTGGAGGGGCAG‑AAAGATGATTGACTGTCCACGACACGAGACCCAAaagcaagc > 1:1056734/1‑151 (MQ=11) gtgtgcgcTGCCCACCACACTCTCCACCACAGAACCCGGCTTATCGGTCAGTTTCACCTGTTTTACTTAAAAACCCGCTTCGGGGGGTTT‑TTTGTTTTGGAGGGGCAG‑AAAGATTAATGACTGTCCACGACACTATACCCAAAAGAAAGCg < 3:1235680/144‑1 (MQ=11) aatgaCTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTAACCTGTTTTACGTAAAAACCCGATGCGGCGGGTTT‑TTACTTTTTGAGTGGCAG‑AAAGAAGAATGACTGTCCGCGACACTAAAGGCAACAGAAACCgac > 4:988201/1‑149 (MQ=11) atgaCTGTCCACGACACTATACCC‑AAAGAAAGCGGCTTATCGGTCAGTTTAACCTGTTTTACGTAAAAAACCGCTTCGGCGGGTTT‑TTACTTTTTGAGGGGCAG‑AAAGATGAATGACGGTCGACGACCCTATACCCAAAAGTAAGCGGGtt > 3:367959/1‑151 (MQ=11) gaCTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTAACCTGTTTTACGTAAAAACCCGCTGCGGCGGGTTT‑TTGATTTTTGAGTGGCAG‑ATAGAAGAATCACTGTCGACGACACTAGAGGCTAAAGACTGCGGCtt > 8:712451/1‑150 (MQ=11) aCTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTT‑TTTCTTTTGGAGGGCCAG‑AAAGATCAATCACTTTCGCCGACACTCTCCGCAAAAGAAAGCGGcatc > 3:931792/1‑147 (MQ=11) cTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTAACCTGTTTTACGTAAAAACCCGATTCGGCGGGTTT‑AAAATTTTTGAGTCCCAT‑AAAGAAATAACACTATCCACGACACAATAAACAaaagacaacaaattatc > 2:355188/1‑139 (MQ=2) tGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTGACCTGTTTTACGTAAAAACCCGATTCGGCGGGTTT‑TTACTTTTGGAGGGGCAG‑AAATATGAGTGAGTGTCCACGACACTATCCCCTACTGAAAGCGGCTTATCg > 3:186100/1‑151 (MQ=11) atattaatcacTATCCACAAAATAACCAGTCTTATCTTTAATTTTCACGTTTTTTACGTAAAACGGGTCTTCGGCTGGTTT‑TTTTTTTTGTAGGGGGTC‑AAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCg < 2:117265/142‑1 (MQ=2) tCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTAACCTGTTTTACGTAAAAACCCGGTGCGGCGGGTTT‑TTGATTTTGGAGGGGCAG‑ATAGATGTAACGCTGTCCACGTCCGAATACCAAAAAGATGGCGTCTtctccgg > 3:1416928/1‑148 (MQ=2) cgcgggctcggcgaCCCCACAGAACGCGGCTTAGCGGGCCGTTGCCCCTGTTTTACTTAAAAACCCTCGTCGGCGGGTTT‑TTACTTTTGGAGGGGCTG‑AAAGTTTACTTAAGCCCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGt < 7:1272609/138‑1 (MQ=2) ccACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTGCGGCGGGTTT‑TTACTTTTTGAGGGGCAG‑AAATATGAATGCCTGTCGGCGAGACGATACCAAAATGAAAGCGGCATATCGGt > 7:516299/1‑150 (MQ=11) gACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTGTTTTACGTAAAAACCCGGTTCGGCGGGTTT‑TTACTTTTTGAGTGGCAT‑AAATTTAAATGGCTTTCGGCGGCTCTATACACAAAAGAAATCGGCTTATCTGTCAGtt > 5:841447/1‑151 (MQ=11) gACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTT‑TTACTTTTGGAGGGGCAG‑AAAGATGAATGACTGTCGACGACACTATACCCTAAAGAAAGCGGCTTATCGGTCAGtt > 5:273222/1‑151 (MQ=25) acTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTGTTTTACGTAAAAACCCGGTTCGGCGGGTTT‑TTACTTTTGGAGGGGCAT‑AAAGATGAATGACTGTCCACGACACTATACAAAAAAGAATGCGGCTTATCGGTCAGtttt > 8:278896/1‑150 (MQ=255) caactctctgCGGATTTTCGGTCAGTTTCACCTGTTTTACGTAAAAACCGGTTTGGGGGTTTTT‑TTTCTTTTGGAGGGGAAT‑AAATATTAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGt < 6:421446/142‑1 (MQ=11) cAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTT‑TTACTTTTGGAGGGGCAG‑AAAGATGAATGCCTGTCCCCGACACTATACCAAAAAGAAAGCGGCTTATCGGTCAGTTTTACGTGagtt > 5:377262/1‑148 (MQ=255) aaagaaagCGGCTTATCGGTCAGTTTCACCTGTTTTACGTAAAAACCCGGTTCGGCGGGTTT‑TTACTTTTGGAGGGGCAG‑AAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGCTCAGTTTTACCTGATGTa > 6:1499582/1‑150 (MQ=255) aaagaaagCGGCTTATCGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTT‑TTACTTTTGGAGGGGCAG‑AAAGAGGAAACCCTGTCCGCGACACGATCCCCAAAAGAAAGCGGCTTATCGGTCAGTTTTAAGTGATGTAc > 1:1215558/1‑151 (MQ=14) agaaagCGGCTTATCGGTCAGTTTGACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTT‑TTACTTTTGGAGGGGGAG‑AAAGATGAAAGACTGTCGACGACACTATACCAAAAAGAAAGCCGCTTATCGCTCAGTTTTACATGATGTACGt > 1:823769/1‑151 (MQ=14) agaaagCGGCTTATCGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTT‑TTACTTTTGGAGGGGCAG‑AAAGATGAATGACTGTCCACGACACTATACCAAAAAGAAAGCGGCTTATCGGTCAGTATTACCTTATGTACGt > 4:662533/1‑151 (MQ=255) gaaagCGGCTTATCGGTCAGTTTCACCTGTTTTACGTAAAAACCCGATACGGCGGGTTT‑TTACTTTTGGAGTGGCAG‑AAATAAGAATCACATTCCACGACACTATAAAAAAAAGAAAACAGAATATCGGTAAGTATTACATGATGTaaat > 4:140193/1‑147 (MQ=14) aaagCGGCTTATCGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTT‑TTACTTTTGGAGGGGCAG‑AAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGTACGta > 8:48621/1‑150 (MQ=40) aaagCGGCTTATCGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTACGGCGGGTTT‑ATACTTTTGGAGGGCCAG‑AAAGATGAAAGACTGTCCACGACACTATAACAAAAAGAAAGCGGCTTATCGGACAGTATTACCTGATGTACGta > 4:1424264/1‑150 (MQ=14) agCGGCTTATCGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTT‑TTACTTTTGGAGGGGCAG‑AAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGTACGtaat > 1:366119/1‑150 (MQ=255) gCGGCTTATCGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTT‑TTACTTTTGGAGGGGCAG‑AAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTAAATGATGTACGtaata > 3:1763012/1‑150 (MQ=255) cGGCTTATCGGTCAGTTTCACCTTTTTTACGTAAAAACCCGCTTCGGCGGGTTT‑TTTCTTTTGGAGGGGCAG‑AAAGATGAATGACTGTCCACGacac < 5:1116416/97‑1 (MQ=12) cGGCTTATCGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTT‑TTACTTTTGGAGGGGCAG‑AAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGTACGtaataa > 5:567170/1‑150 (MQ=255) cGGCTTATCGGTCAGTTTCACCTGTTTTACCTAAAAACCCGCTTCGGCGGGTAT‑TAACTTTTGGAGCGGCAG‑AAAGATGAATCACATTCCACGACACTAAACCCAAAAGAAAGCGGCTTATCAGACAGTTTAACAAGATGTACCtaataa > 4:940111/1‑150 (MQ=14) gcatATCGGTAAGTTTCAAATCATTTACGTAAAAAACAGCTTCGGCGGGTTT‑TTACTTTTTGAGCGGCAT‑AAAGATGAATGACTGTACACGACACTATACCCAAAAGAAAGAGGCATATCGGTCAGTTTTACCTGATGTAATTAATAAAcc > 6:1368835/4‑151 (MQ=14) gCTTATCGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTT‑TTACTTTTGGAGGGGCAG‑AAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGTACGTAATAAAcc > 1:1593049/1‑151 (MQ=255) tATCGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTT‑TTACTTTTGGAGGGGCAG‑AAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGTACGTAATAAACCGtt > 2:1864296/1‑151 (MQ=255) tATCGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTT‑TTACTTTTGGAGGGGCAG‑AAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGTACGTAATAAACCGtt > 7:1842760/1‑151 (MQ=255) gtttctttttCACCTGTTTTAGGTAAAAACCCGCTTCGGGGGGTTT‑TTTCTTTTGGAGGGGCAG‑AAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGTACGTAATAAACCGTTCcg < 4:1525375/144‑1 (MQ=255) ggTCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTT‑TTACTTTTGGAGGGGCAG‑AAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGTACGTAATAAACCGTTCcgg > 8:1329587/1‑151 (MQ=255) ggTCAGTTTCACCTGATTTACGTAAAAACCCGCTTCGGCGGGTTT‑TTGCTTTTGGAGGGGCAG‑AAAGATGAATTACTGTCCACGACGATATACCCAAAAGAAATCGGCTTATCGGTCAGTTTGACCTGATGTACGTAATAAAcagatacgg > 8:1898992/1‑143 (MQ=11) aGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTT‑TTACTTTTGGAGGGGCAG‑AAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGTACGTAATAAACCGTTCCGGCggg > 8:213520/1‑151 (MQ=255) tttCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTT‑TTACTTTTGGAGGGGCAG‑AAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGTACGTAATAAACCGTTCCGGCGGGtt > 5:542165/1‑151 (MQ=255) tCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTT‑TTACTTTTGGAGGGGCAG‑AAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGTACGTAATAAACCGTTCCGGCGGGtttg > 1:1144295/1‑150 (MQ=255) cACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTT‑TTACTTTTGGAGGGGCAG‑AAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGTACGTAATAAACCGTTCCGGCGGGTTTc > 1:512304/1‑150 (MQ=255) cACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTT‑TTACTTTTGGAGGGGCAG‑AAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGTACGTAATAAACCGTTCCGGCGGGTTTc > 4:1804981/1‑150 (MQ=255) cACCTGTTTTACGTAAAAACCCGCTTCGGCGGGGTT‑TTACTTTTGGAGGCGCAG‑AAAGATGAATGACTGTCCACGAAACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTATTACCTGATGTACGTAATAAACAGTTCAGGCGGGTTTc > 4:461874/1‑150 (MQ=17) | ATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTT‑TTACTTTTGGAGGGGCAG‑AAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGTACGTAATAAACCGTTCCGGCGGGTTTC > DH1/613624‑613919 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |