| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | DH1 | 1,065,618 | 0 | A | G | 22.9% | 343.9 / 118.3 | 216 | intergenic (+53/‑10) | ECDH1_RS05245/ECDH1_RS05250 | tRNA‑Arg/tRNA‑Arg |
| Reads supporting (aligned to +/- strand): ref base A (96/52); new base G (38/6); total (138/78) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.18e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.83e-02 | |||||||||||
Only 100 of 240 total aligned reads displayed.
CAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAAC‑CGAGC‑GGTCGGAGGTTCGAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AAT‑‑ATCAGCAGTAAAATAA‑ATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCGGAATTAACCGCAGGCACT > DH1/1065468‑1065766 | agtaaagtaaGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAAC‑CGAGC‑GGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTGTACGTGATATGGCGGAAGGAGGGGTTGC‑‑AAT‑‑ATCAGGCGTAaaataa‑at > 7:746749/1‑151 (MQ=14) cccctctGCCTCCGTAGCTCAGCTTGATATACGAATCGGCTAGCATCGCTAG‑‑GCTCTGAGGTTCTAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AAT‑‑ATCAGCAGTAAAATAA‑ATTTCCCGATGCATc < 3:1936099/145‑1 (MQ=14) gCATCCGTAGCTCAGCTGGATAGAGAACTCGGCTACGAAC‑CGAGC‑GGTCGGAGGTTCGAATCCTCCCGGATGCACCATATAATACATCATATGCCGATAGTATCGGAAAA‑‑AAT‑‑AGATAAAGTAAAAAAA‑ATAACCCAATGCCTCCGTatc > 2:1613020/1‑148 (MQ=2) cATCCGTAGCTCAGCTGCATAGACTACGCGGCTACGAAC‑CCCGC‑GGTCGGATTTTATAATCCTCCCGGCAGCACCATCTCTTACTTTATATGTATTTATTAGCGGTATC‑‑AAT‑‑ATCAGCAGTAAATTAA‑ATTTCCCTATGCATCCGTAGCTc < 6:519725/151‑1 (MQ=18) aTCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAAC‑CGAGC‑GGTCGGAGGTTCGAATCCTCCCGGATGCACCATATAGTACTAGATATTGATGAATTAGCGGAATC‑‑AAT‑‑ATGTTCAGTAAATAAA‑ATATCCCGCTggctatgttcagc > 1:486518/1‑138 (MQ=2) gCTCAGCTGGATAGAGTACTCGGCTACGAAC‑CGAGC‑GGTCGGAGGTTCGAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AAT‑‑ATCAGCAGTAAAATAA‑ATTTCCCGATGCATCCGTAGCTCAGCTGGAt < 7:113205/151‑1 (MQ=255) gaaacctggcctgactACTCGGCGACGAGCGCGAG‑‑GGTCGTCGCGTCTAATCCTCCCGGATTCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AAT‑‑ATCAGCAGTAAAATAA‑ATTTCCCGATGCATCCGTAGCTCAGCTGGATa < 5:91351/136‑1 (MQ=14) tCAGCTGGATAGAGTACTCGGCTACGAAC‑CGAGC‑GGTCGGAGGTTCGAATCCTCCCGGATGCACCATATATTACTTGATATTGCTGTAGTAGCGGTTTC‑‑AAT‑‑ATCAGCATTAAAATAA‑ATTTCACGATGCATACGTAGCTCAGCTGGATat > 8:1423560/1‑150 (MQ=21) agctgttttttgTACTCGGCGACG‑AT‑CGAGCGGGTCGGCGCGTCTAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AAT‑‑ATCAGCAGTAAAATAA‑ATTTCCCGATGCATCCGTAGCTCAGCTGGATagag < 3:473748/140‑1 (MQ=14) gCTGGTTAGTCTACTCGGCTACGAAC‑GGGAC‑GCGCGGCGCGTGGAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AAT‑‑ATCAGCAGTAAAATAA‑ATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGt < 7:1364356/151‑1 (MQ=14) tAGAGTACTCGGCTACGAAC‑CGAGC‑GGTCGGAGGTTCGAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AAT‑‑ATCAGCAGTAAAATAA‑ATTTACCGATTCATCCGTAGCGCATGTGGTTagaatcatcgg > 1:823862/1‑143 (MQ=21) tAGAGTAATCGGCTACGAAC‑CGTTG‑GGGCGGAGGTTGGAATCCTCCCGGATGCACCATCTCTTAATTGATATGGCTTTAGTAGCGGTATC‑‑AAT‑‑ATCAGCAGTAGAATAAGTTTTCCCGATGc < 4:221708/122‑1 (MQ=11) ggcgacgagcgcgcgggTCTGAGCGTCTAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AAT‑‑ATCAGCAGTAAAATAA‑ATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCg < 7:1646098/136‑1 (MQ=14) tACGAAC‑CGAGC‑GGTCGGAGGTTCGAATCCTCCCGGATGCACCATCTAGTACTTGATATGGCGGTAGGAGGGGTTGG‑‑AAT‑‑ATCTGCAGTAATTTAA‑ATTTCCCGATGCCTCGGTAGCTCATCTGGATAGAGTCGTCGGCTACgcccccagc > 1:1040411/1‑143 (MQ=19) gacgacgggggC‑GGTCTGAGCGTCTAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AAT‑‑ATCAGCAGTAAAATAA‑ATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGc < 8:87492/141‑1 (MQ=14) aaC‑CGAGC‑GGTCGGAGGTTCGAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AAT‑‑ATCAGCAGTAAAATAA‑ATTTGCCGATGCATCCGTAGCTGAGCTGGATAGAGTACTCGGCTACGAACCgcgccggg > 7:1266615/1‑147 (MQ=255) gTCGGAGGTTCGAATCCTCCCGGATGCACCATATATTACTAGATATTCCTGTAGTAAAGGAATG‑‑AAT‑‑ATAATAAGGAAAATAA‑AGGTGGCGATGCATACATTAAAAATAATGATAGAGTAGTCGGCTGCGCGCCGAGCGGTGGGAGGttgg > 2:102301/1‑149 (MQ=255) ggagcgtctaagcctccCGGATGCACCATCTCTTACTTGATCTGGCTTTACTAGCGGTATA‑‑AAT‑‑ATCAGCAGTAAAATAA‑ATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAAt < 5:1339579/139‑1 (MQ=14) ggAGGTTCGAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCGGTAGTAGCGGTAGG‑‑AAT‑‑ATCACCAGTAAAATAA‑ATTTCCCGATTCTTCCGTAGCTCTGCTGGATAGAGTACTCGGCTACGCTCCGAGCGGGCGGAGGTTCgctt > 7:400401/1‑148 (MQ=14) gAGGTTCGAATCCTCCCGGATGCACCATCTGTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AAT‑‑ATCAGCAGTAAAATAA‑ATTTCCCGATGCGTACGTAGCTCAGCTGGTTAGAGTACTCGGCTACGACCCGCGCGGTCGGAGGTTCGAAtc > 7:581336/1‑151 (MQ=14) gAGGTTCGAATCCTCCCGGATGCACCATATGGTACGAGATATGCCTAAAGTACCGGAAAC‑‑AAG‑‑ATCTCCAGTAAAAAAA‑ATAACCCCATGCATAAGAAGCAGAGCTGGATAGACAACACCGCTACGCACCCAGCCAGCGGAGGGTCGaaac > 4:1816420/1‑149 (MQ=255) cgcttCTAATCCTCCGGGATGCACCATCTCTTACTTGATCTGGCTTTACTAGCGCTAAA‑‑AAT‑‑ATCAGCAGTAAAATAA‑ATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAAtcc < 3:1814892/148‑1 (MQ=14) ccgcccGGATGCACCATCTCTTCCTTGATATGGCTGTAGAAGCGCTATC‑‑CAT‑‑ATCTGCAGTCACATAA‑CAATCCCGCTGTACCGCTATCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGc < 7:969943/148‑1 (MQ=11) ccGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AAT‑‑ATCAGCAGTAAAATAA‑ATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCAcc > 8:855849/1‑150 (MQ=40) cACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AAT‑‑ATCAGCAGTAAAATAA‑ATTTACCGATGCATCCCTAACTCAGCTGGATAGAGTACTACGCTACGAACCGAGCGGTACGAGGTTCGAATCATCCCCCATGCACCAAATtct > 2:1688837/1‑150 (MQ=14) aCCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AAT‑‑ATCAGCAGTAAAATAA‑ATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTcc > 5:973167/1‑151 (MQ=39) aTCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AAT‑‑ATCAGCAGTAAAATAA‑ATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGa > 8:27268/1‑150 (MQ=40) tcctatctatagtgCTTTATTATAGGTATC‑‑AAAAAATCTGCAGTAAACTAA‑CTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGaaa < 4:1704033/137‑1 (MQ=11) ctTACTTGATATGGCTTTAGTAGCGGTATC‑‑AAT‑‑ATCAGCAGTAAAATAA‑ATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGACGTTCGAATCCTCCCGGATGCACCATATtctaccacatcg > 3:731380/1‑142 (MQ=255) tACTTGATATGGCTTTAGTAGCGGTATC‑‑AAT‑‑ATCAGCAGTAAAATAA‑ATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCTAAATCtt > 6:1792175/1‑150 (MQ=255) tACTTGATATGGCTTTAGTAGCGGTATC‑‑AAT‑‑ATCAGCAGTAAAATAA‑ATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTc > 2:78114/1‑151 (MQ=255) ttGATACGGCTTTAGTAGCGGTATCAAAAA‑‑ATCTGCAGTAAAGTAA‑GTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCCGATGCACCATATTATACGAAAtatac > 2:1182369/1‑146 (MQ=14) tGATACGGCTTTAGTAGCGGTATCAAAAA‑‑ATCTGCAGTAAAGTAA‑GTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTGTCCGAAATATTccg > 5:598125/1‑149 (MQ=14) gATATGGCTTTAGTAGCGGTATC‑‑AAT‑‑ATCAGCAGTAAAATAA‑ATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCa > 5:1496651/1‑150 (MQ=255) gATATGGCTTTAGTAGCGGTATC‑‑AAT‑‑ATCAGCAGTAAAATAA‑ATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCa > 2:1915263/1‑150 (MQ=255) gATACGGCTTTAGTAGCGGTATCAAAAA‑‑ATCTGCAGTAAAGTAA‑GTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTATCCTAAATATTCatt > 6:1041623/1‑149 (MQ=14) atatGGCTTTAGTAGCGGTATC‑‑AAT‑‑ATCAGCAGTAAAATAA‑ATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAAt > 2:294996/1‑151 (MQ=255) atacGGCTTTAGTAGCGGTATCAAAAA‑‑ATCTGCAGTAAAGTAA‑GTTTCCCGATGCATCCATATCTCAGATGTATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCACCGATCCAACATATAATACAAAATCTTCAga > 8:1098383/1‑149 (MQ=14) tacggCTTTAGTAGCGGTATCAAAAA‑‑ATCTGCAGTAAAGTAA‑GTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATAATCCGAAATATTCataa > 2:230603/4‑147 (MQ=14) ttGGTTTTAGTAGTGTTATT‑‑TAT‑‑ATCAGTAGTATAATAA‑TTTTCGCGATGCTTCGGTAGCTGATCTGGATAGAGTACTCGGCTACGATGCGTGCGGTCGGAGGTTGGAATCCTCCCGGATGCACCATATTCTCGGAAATCTTCAGCAATg < 4:657663/149‑1 (MQ=11) atGGCTTTAGTAGCGGTATC‑‑AAT‑‑ATCAGCAGTAAAATAA‑ATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAAGCTTCAGCAATg > 1:854482/1‑150 (MQ=255) acggCTTTAGTAGCGGTATCAAAAA‑‑ATCTGCAGTAAAGTAA‑GTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTATACGATATATTCAgat > 1:1139576/3‑147 (MQ=14) ggCTTTAGTAGCGGTATCAAAAA‑‑ATCTGCAGTAAAGTAA‑GTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATACTACTAAATATTCataaatt > 8:1249305/1‑144 (MQ=14) cTTTAGTAGCGGTATC‑‑AAT‑‑ATCAGCAGTAAAATAA‑ATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGt > 6:1460942/1‑151 (MQ=255) cTTTAGTAGCGGTATC‑‑AAT‑‑ATCAGCAGTAAAATAA‑ATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGt > 6:1054680/1‑151 (MQ=255) tttAGTAGCGGTATCAAAAA‑‑ATCTGCAGTAAAGTAA‑GTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATAATACTAAATATTCATAAATTAAgg > 8:1501042/1‑151 (MQ=14) ttAGTAGCGGTATCAAAAA‑‑ATCTGCAGTAAAGTAA‑GTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTACGATATCTTGAGCTATGAACGt > 1:164333/1‑151 (MQ=11) agtagCGGTATCAAAAA‑‑ATCTGCAGTAAAGTAA‑GTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTGTCCGAGATATTGCGGAATGatcggtt > 7:1540421/1‑145 (MQ=14) agtagCGGTATC‑‑AAT‑‑ATCAGCAGTAAAATAA‑ATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTAc > 2:92138/1‑69 (MQ=255) ttttcggtataaaaaT‑‑ATCTGCAGTAAATTAA‑TTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTAt < 4:123126/137‑1 (MQ=11) tagCGGTATC‑‑AAT‑‑ATCAGCAGTAAAATAA‑ATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTGTCCGAAATCTTCAGGAATGAAGGTATGGa > 6:1563953/1‑150 (MQ=255) tagCGGTATC‑‑AAT‑‑ATCAGCAGTAAAATAA‑ATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAAACTTCAGCAATGAAGGTATCGa > 5:661094/1‑150 (MQ=255) agCGGTATC‑‑AAT‑‑ATCAGCAGTAAAATAA‑ATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGTAACCTTCAGCAATGAAg > 4:1057828/1‑142 (MQ=18) agCGGTATC‑‑AAT‑‑ATCAGCAGTAAAATAA‑ATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGTAAACTTCAGCAATGAAGGTATCGaa > 8:1778317/1‑150 (MQ=25) gTATC‑‑AAT‑‑ATGAGCAGTAAACTAA‑ATATCCCGCTGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGCGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGt < 7:1420564/151‑1 (MQ=255) ggtatcaaaaaatCTGCAGTAAAGTAA‑GTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTGTACTAAATATTCAGAAATGAAGGTATGGa > 1:1284704/12‑148 (MQ=11) tatcaaaaaatCTGCAGTAAAGTAA‑GTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTACGAAATCTTCAGCAATGAAGGTAACGAATAgg > 5:1169002/10‑151 (MQ=11) aaaaT‑‑ATCTGCAGTAAATTAA‑TTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGc < 4:507644/149‑1 (MQ=255) aaT‑‑ATCAGCAGTAAAATAA‑ATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATtc > 5:1227003/1‑111 (MQ=40) aaT‑‑ATCAGCAGTAAAATAA‑ATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGTAACCTTCAGCAATGAAGGt < 4:1874681/135‑1 (MQ=18) aaT‑‑ATCAGCAGTAAAATAA‑ATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAgg < 8:1951714/134‑1 (MQ=255) aaT‑‑ATCAGCAGTAAAATAA‑ATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAgg > 7:1948261/1‑134 (MQ=255) aaT‑‑ATCAGCAGTAAAATAA‑ATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGCTAGCgg > 1:1703306/1‑151 (MQ=255) at‑‑atCAGCAGTAAAATAA‑ATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAAACTTCAGCAATGAAGGTATCGAagag > 8:1838534/1‑143 (MQ=255) t‑‑atCAGCAGTAAAATAA‑ATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGTAACCTTCAGCAATGAAGGTATCGAAGAGATAGc < 3:135294/147‑1 (MQ=9) aaatCTGCAGTAAAGTAA‑GTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTATCCGAAATATTCAGCTATGAAGGTATGGAAGATGTAGAgg > 3:235540/3‑150 (MQ=14) aatCTGCAGTAAAGTAA‑GTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTGTCCGACATATTCAGGAATGAACGGAAGCAAGAGGTAGAGGa > 6:1194643/2‑150 (MQ=11) aatCTGCAGTAAAGTAA‑GTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTACGACATATTCAGGAATGAACGGATAGAAGATGTacagta > 5:738659/2‑145 (MQ=11) atCAGCAGTAAAATAA‑ATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGt > 2:464286/1‑74 (MQ=255) atCAGCAGTAAAATAA‑ATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAAtcct > 1:1852144/1‑90 (MQ=40) atCAGCAGTAAAATAA‑ATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCGGAAt > 2:797351/1‑151 (MQ=255) agcagccgAAAATTAA‑ATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGTAACCTTCAGCAATGAAGGTATCGAAGAGATAGCggta < 7:858207/148‑3 (MQ=11) tCAGCAGTAAAATAA‑ATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCGGAAtt > 6:351535/1‑151 (MQ=255) acaccagTAAAATAA‑ATTTCCCGATGCATCCGTAGCTCAGCTGTATAGACTACCCCGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCGGAAtt < 1:562345/147‑1 (MQ=255) cagcagTAAAATAA‑ATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCGGAAtt > 3:1445351/1‑150 (MQ=255) agcagTAAAATAA‑ATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCGGAATTaa < 5:1040143/151‑1 (MQ=255) agcagTAAAATAA‑ATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCGGAATTa > 5:1717194/1‑150 (MQ=255) gcagTAAATTAA‑TTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCGGAAt < 2:1292693/147‑1 (MQ=255) gcacTAAAATAA‑AATTCGCGATGCCTCGTTTGCTGAGGTGGCTACTTCACTCGTCTACGATCGGTCGGGGCTCAGGGTGTAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCGGAATTAAc < 7:608470/151‑1 (MQ=9) cagTAAATTAA‑GTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCGGAATTAAcc < 4:985760/151‑1 (MQ=255) cagTAAAGTAA‑GTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTGTACGACATCTGGAGCAATGATGGTTTGGAAGATGtcgagtataggaa > 1:1604687/1‑138 (MQ=11) cagTAAAGTAA‑GTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTAAGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATAATCCGAAATCTTCATCTATGAACGTATAGAAGATGTAGCGGAATTaaa > 4:1454215/1‑149 (MQ=14) agTAAAATAA‑ATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGt > 7:801281/1‑75 (MQ=38) agTAAAATAA‑ATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCa < 4:1562736/97‑1 (MQ=35) tAAAGTAA‑GTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATCTTATCCTAAATATGCATAAATGAACGTATAGAAGATCTACCGTAATTaaaata > 2:371553/1‑146 (MQ=11) aaagTAA‑CTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCGGAATTAACCGCa < 1:1172859/150‑1 (MQ=255) aaaaTAA‑GTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCGGAATTAACCGCAg < 1:1482639/151‑1 (MQ=255) aaaaTAA‑ATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGTAAACTTCAGCAATGAAGGTATCGAAGAGAGATCGGaagagagacgtg > 6:96190/1‑141 (MQ=11) aaataa‑atTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGtt < 4:1111831/72‑1 (MQ=38) aaataa‑atTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGtt > 3:1105919/1‑72 (MQ=38) aaataa‑atTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAACCTTCAGCAATGAAGGTATCGAAGAGATAGCGGTATTAACCGCAgg > 3:1793889/1‑151 (MQ=2) agtaa‑gtTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATCTTATCCGAGATCTGCCTCTATGACGGTATCGAAGAGGTGGAGGAATTAAACTCAGGc > 5:251007/3‑151 (MQ=14) agtaa‑gtTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTGTCCGAAATATTCAGAAATGAAGGTATCGAAGAGGTAGCGGAAATAAcagaagcc > 8:518482/3‑144 (MQ=14) actaa‑gtTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCGGAATTAACCGCAGGc < 7:509517/149‑1 (MQ=255) ttaa‑atTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATtctc < 3:1686886/97‑1 (MQ=18) ataa‑atTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGGAATGAAGGTATGGAAGAGGTAGCGGACTTACCCGCAGGcc > 3:1291276/1‑150 (MQ=255) taa‑atTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCata > 5:1779000/1‑92 (MQ=33) taa‑atTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATAtt > 1:1328864/1‑94 (MQ=33) aa‑atTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCGGAATTAACCGCAGGCACt > 1:781200/1‑151 (MQ=40) atTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGt < 3:1900951/58‑1 (MQ=31) | CAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAAC‑CGAGC‑GGTCGGAGGTTCGAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AAT‑‑ATCAGCAGTAAAATAA‑ATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCGGAATTAACCGCAGGCACT > DH1/1065468‑1065766 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |