Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | DH1 | 3,184,585 | 0 | C | A | 25.4% | 382.6 / 59.3 | 181 | intergenic (+8/‑30) | ECDH1_RS15795/ECDH1_RS15800 | tRNA‑Gln/tRNA‑TERM |
Reads supporting (aligned to +/- strand): ref base C (72/63); new base A (39/7); total (111/70) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.08e-04 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 184 total aligned reads displayed.
CGAATCCCGTCGTAGCCACCAAATTCTGAATGTATCGAATATGTTCGGCAAATTCAAAACCAATTTGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGA‑CGC‑TTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAGCTCGCTTCGGCGAGCTTTTTGCTTTTCTGCGTTC > DH1/3184435‑3184734 | cGACTCCCGTCGTAGCCACCAAATTCTGAATGTATCGAATATGTTCGGCAAATTCAAAACCAATTTTTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGCGGGTCGAATCCTCGTACCCCAGCCAATTTATTc < 1:885402/151‑1 (MQ=255) tcgtAGCCACCAAATTCTGAATGTATCGAATATGTTCGGCAAATTCAAAACCAATTTGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTATAAAAGA‑ccgtt > 3:1924791/1‑147 (MQ=255) ccgtACCCACCAAATTCAGAATTTATAGAATCTGAGCGCCAAATTCAATACCAATTTTATGCGTTATCGTCAAGCGGTAATCCACGGTCTTCAGATTTCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGA‑CGC‑tt < 8:1739486/150‑1 (MQ=16) cgtCGCCACCATTTTATGAATCAATCTTATAAGTGCATCAGATTCAAAGCGCGTTTATTGGTGTACCGCCCAGCGCTAATGCCCCGTTTTTTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGA‑CGC‑TTa < 7:1476665/151‑1 (MQ=12) cgtAGCCACCAAATTCTGAATGTATCGAATATGTTCGGCAAATTCAAAACCAATTTGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTAATAAAGaaccatt > 6:1888136/1‑145 (MQ=255) cgtAGCCACCAAAATCTGAATGTATCGAATATTTTCTGCAAATTCAAACCCATTTTGTTGGGGTATCTGCTAGCGGTTACGCACAGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGA‑CGC‑TTa < 5:674707/151‑1 (MQ=25) gCCACCAAATTCTGAATGTATCGAATATGTTCGGCAAATTCAAAACCAATTTGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATAAAAGatcctttcgtg > 5:1892596/1‑141 (MQ=255) caccaAATTCTGAATTTATATAATATGTTCGGCAAATTCAAAACCAATTTTTTGTTGTATCCCCAATCTGTAAGGAAGCGGATTCTGATTCCGGCATTCCGTGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGA‑CGC‑TTACCTTGt < 8:78227/151‑1 (MQ=25) caccaAATTCTGAATGTATCGAATATGTTCGGCAAATTCAAAACCAATTTGTTGGGGTATCGCCAAGCGGTAAGGCATCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATAAAAGC‑AGC‑ATACCTTGt > 5:1894143/1‑151 (MQ=25) accaAATTCTGAATGTATCGAATATGTTCGGCAAATTCAAAACCAATTTGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTATTAAAgctcgattcggagtt > 8:1909902/1‑137 (MQ=18) ccaAATTCTGAATGTATCGAATATGTTCGGCAAATTCAAAACCAATTTGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGA‑CGC‑TTACCTTGTaa < 2:1712253/151‑1 (MQ=255) caAATTCTGAATGTATCGAATATGTTCGGCAAATTCAAAACCAATTTGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGA‑CGC‑TTACCTTGTAAg < 3:1944277/151‑1 (MQ=255) gTATCGAATATGTTCGGCAAATTCAAAACCAATTTGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGA‑CGC‑TTACCTTGTAAGTGCACCCAGtt < 6:1686728/150‑1 (MQ=255) tATCGAATATGTTCGGCAAATTCAAAACCAATTTGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTAGAATCCTAGTACCACATCGAATTTATTAAAGA‑AAA‑TAAAATTGTAAATGAACCCAGTAgg > 8:1430681/1‑151 (MQ=18) actaaTATGTTCGGCAAATCCAAAACCAATTTGTTGGGGTATCGCCAAGCGTTACGGCACCGTATTCTGATTCCGGAATTCCGAGTTTCCATCCCGCTTACCCCAGCCAATTTATTCAACC‑CGC‑TTACCTTGTAAGTCCACCCAGTTggg < 4:430485/147‑1 (MQ=255) tatGTTCGGCAAATTCAAAACCAATTTGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAAATTAAAAAAGA‑ACG‑ATACCTAGAAAGTGAACCAAGtttgcgt > 8:1509549/1‑142 (MQ=17) gTTCGGCAAATTCAAAACCAATTTGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGA‑CGC‑TTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCa < 7:495703/151‑1 (MQ=255) gTTCGGCAAATTCAAAACCAATTTGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTAAAGA‑AGC‑TTACCTGGTAAGTGCACCCAGTTGGGGTATCGcc > 3:1614005/1‑150 (MQ=255) atcgtaaaaTTCAAAACCAATATCTAGTCTAATCTCAAATCTGTAAGGCAACTGTTGGTGATTCCGTCATTCCNAGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGA‑CGC‑TTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCa < 2:1123804/144‑1 (MQ=19) cGGCAAATTCAAAACCAATTTGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACTTTAATAAAG‑‑CGCGGTACCGTGTACTTGCTCCCAGTGGGGGTAGCTCCAAgg > 3:118079/1‑150 (MQ=17) cGGCAAATTCAAAACCAATTTGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGA‑CGC‑TTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAg < 1:1927494/150‑1 (MQ=255) ggCAAATTCAAAACCAATTTGTTGGGTTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGA‑CGC‑TTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCg < 5:272598/151‑1 (MQ=255) gCAAATTCAAATGCAATTTGTTGGTGTTTGTCCTAGCGGTAAGGCACCGGATTCTGATTCCGGCATTACGACGTTCGTATCCTCGTACCCCAGCCAATTTATTCAAGT‑CGC‑CTACCTTGTAAGTGCACGCAGTTGGGGTATCGCCAAGCgg < 3:1109730/151‑1 (MQ=25) cAAATTCAAAACCAATTTGTTGGTGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGA‑CGC‑TTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGt < 3:440131/151‑1 (MQ=255) aTTCAACACCAATATCTGGGGGTATCGCACAGCGGTAAGGCACCGGATTCTGATTCCGGCAGTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGA‑CGC‑TTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAg < 1:1020807/151‑1 (MQ=25) cAAAACCAATTTGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACTTTATTAAAGA‑CGG‑TTACCTTGTAAGTGATCCCTGTTTGGGTAGCGACAATCTGTAAGGcc > 5:771346/1‑150 (MQ=18) gcccggttattgGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAAGTTATTCAAGA‑CGA‑tt > 5:1350441/10‑102 (MQ=11) ccAATTTGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTAAAGA‑AGC‑TTACCTTGAAAGTGAACCCATTTTGGGTATATACAAGATGTAAggagcagg > 5:227136/1‑144 (MQ=18) cAATTTGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACTTTATTAAAGA‑CGC‑TTACCTTGTAAGTGCTCCCAGTTGGGGTAGAGGCAAGCGGTAAGGCCACGGAt > 5:732318/1‑151 (MQ=21) gtttATTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGA‑CGC‑TTACCTTGTAAGTGCACCCAGt < 4:1652956/117‑1 (MQ=255) aTTTGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTATACAAGATCGG‑TT‑CCGGGTAAGTGATCCGTGTTGGGGTTTCTCCAAGCTGGAAGGCCCCGGAGTc > 1:597667/1‑151 (MQ=2) ttgtgggtttATCACAAAGCGTTAAGGCACCTGATTCTGATTCAGGCATTCCGAGGTTCGAATCCTCGTACCGCAGCCAATTTATTCAATA‑CGC‑TTAAATTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCt < 3:890371/141‑1 (MQ=25) tattgGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGA‑CGC‑TTACCTTGTAAGt < 6:1369360/104‑1 (MQ=255) gtgggTATCGCCTAGCTGTAAGGCTCCGGATTCTGTTTCAGGCACTCCGAGGTTCGAATCCTCGTACCGCAGACTATTTATTCAAGA‑CTC‑TTAACTTGTAAGTGCACCCTGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAAtt < 8:765455/148‑1 (MQ=25) gggtTATCCCCAAGCTGTACGGCACCGGATTCTGAGTCCGGCATGCCGACGGTCGAATCCTCGTACCCCAGACAATTTATTCAAGA‑CTC‑TTACATTGTAACTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTcc < 3:976345/151‑1 (MQ=37) gggTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGA‑CGC‑TTACCTTGTAAGTGCACCCAGTTgg < 5:1607928/113‑1 (MQ=255) tATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCTCGTACCCCAGCCATTTTAGTCACGA‑CGA‑TTAGCGTGTTAGt > 7:685980/1‑98 (MQ=1) tATCGCCAAGCGGTAAGGCACCGGTTTATGATACCGGCATTCCCAGGTTCGAATCCTCGTACCCCAGCCAAATTATTCAAGA‑ACA‑TTACCATGTAAGtac > 6:796106/1‑98 (MQ=14) tATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTAAAGC‑AGC‑TTTCCTTGTAAGTGCACCCAGTGGGGGTAGCTCCAAGCTGTAAGGCGACGTAGTCTAATTCCGGc > 7:419539/1‑150 (MQ=21) tCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGA‑CGC‑TTCCCATGTAAGTGCAccc > 1:317179/1‑102 (MQ=21) cGCCTAGCGGTAATCCACAGGATTCTGATACCGGCAGTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGA‑CGC‑TTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCAtt < 7:1904157/150‑1 (MQ=38) caagcgtgtcctcACCGGATGCTGACTCCGGCAGTCCTACGGTCGAATCCTCGTACCCCAGACAATTTATTCAAGC‑GGC‑TTAAAATGTAACTGCACCGAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGa < 7:1337583/139‑1 (MQ=21) aaGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTCa < 4:1105022/72‑1 (MQ=255) aaGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGA‑CGC‑TTACCTTGTAAGTGCACCCAGtt < 7:1522789/101‑1 (MQ=255) aGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCTCGTACCCCAGCCAAGTTATTCAAGA‑CGC‑TTACCTTGAAAGTGCACCGAGTTgggtg > 7:1225244/1‑103 (MQ=17) aGCGGTAAGGCACCGGTTTGTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGA‑CGC‑TTACCTTGTAAGTGCACCCAGTTGGGGt < 8:1228235/105‑1 (MQ=255) aGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTAAAGA‑GCG‑GTACGGGGAGAGTGCAGCGTTTGGGGGTTGCGCCAAGCGGGAAGGCCCGGGTGTCGCTTTCCGGCCTTCCGAgt > 1:670071/1‑150 (MQ=9) ccggaaatcatacGGATTCTGTTTCCGGCTTTCCGAGGGTCGAATCCTCGTACCCCAGCCACTTTATTCAAGC‑CGC‑TTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGt < 1:90164/139‑1 (MQ=37) ttAATGCTCCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCTATTTATTCAAGA‑GGC‑TTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTc < 7:106771/149‑1 (MQ=255) ggactctaaaggATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGACAATTTATTCAAGA‑CGC‑TTACCTTGTAAGTGCAACCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGtt < 4:1171946/139‑1 (MQ=38) aaGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAAATTATTAAAGC‑ACC‑TTACGTGGTACGTGATCCAAGTCTGCGTTGATCCAATCTGTAAGGCGCCGGAGTCTAGTGGCGGCATTCCTAGGTTCgc > 7:54691/1‑149 (MQ=9) gCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGA‑CGC‑GTACCTTGTAAGTGCACCCAGTTGGGGTAGAGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGGTCGACTcc > 7:95825/1‑151 (MQ=255) ccACCTGATGCTGACACCGGCATTCAGAGGGTCGAAGCCTCGTACCGCAGACTATTTATTAAAGC‑GGC‑GTACATTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATcc < 3:1276201/150‑1 (MQ=18) ggATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTAAAGA‑AGG‑TTACGTGGAAAGTGAACCGTGTATGGGTTTAGACAATCTCTAATGCGACGTATTCTAGTTGGGTCATTCCGAgtctggattgatcgtc > 7:352639/1‑136 (MQ=9) ttCTGATTCCGGCATTCCGAGGTTCGAGTCCTCGTACCCCAGCCAATTTATACAAGC‑AGG‑GTACCTTGTAAGTGCAGCGATTTGGGGTATCGCCAAGCGGTAAGGCCCCGTATTCTACTTGGGGCATTCAGAGTCTCAACTCCTCGTcccc > 7:1464623/1‑151 (MQ=255) ttCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTAAAGA‑AGC‑TTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACAGGTGTCTCTTTCCGTCATTCCCAGTTTCGAATCCTCGTCCCCCAGca > 3:855389/1‑149 (MQ=25) ggCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTAAAGA‑TCC‑TTACCTAGAAAGTGCACCCATTTGGCGTATAGACAAGCGCTAAGGCAAGGGATACTAGTAAAGGCATTCAGAGTATCGAAACCGCCTAcagcatcaacaa > 2:76603/1‑139 (MQ=255) ggtgtaatagcgtCGAATCCACGTAATGCAGACTATTTCTTCTAGC‑CTC‑TTAAATTTTAATTGCAATGTGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTa < 2:434429/139‑1 (MQ=2) caggaatagcgtCGAATCCTCCTACCGCAGACAATATATTCAAGA‑CGC‑TGACAATGCAACTGCACCGAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTaa < 7:745593/140‑1 (MQ=18) aTTCCGAGGTTCGAATCCTCGTACCCCAGCCAAATTAAAAAAGC‑CCC‑GTACCTAGAAAGTTAACCAATTATGCGTATCGGCAAGCGCTAAGGCCCAGGATACAAATACCGGCATTCCAAGTATCCAATCCACCTCCCGCAGCaacaaaaa > 2:1283838/1‑146 (MQ=2) tCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATACAAGC‑CCC‑TTACCTAGTGAGTGCACCCAGTTGGGGTTTCGCCAAGCGGTAAGGCACCGGAGTCTAATTCCGGCATTCCGAGGTTCGAATGCTCGTCCCCCAGCCACAaaaaaa > 5:1957635/1‑150 (MQ=21) cGAGGTTCGAATCCTCGTACCCCAGCCAATTTATACAAGC‑ACC‑GTACCTTGTAAGTGAACCCAGTATGGGTATCTCCAAGCGGTAAGGCACAGGATTCTAATTCAGTCATTCCCAGGATCGAAACCGCCTCCCCCGGCCACAATaaaaaac > 5:751360/1‑150 (MQ=255) gAGGTTCGAATCCTCGTACCCCAGCCAATTTATTAAAGA‑CGC‑TTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGTATTCTAATTCCGGCATTCCGAGGTGCGAATCCTCGTACCCCAGCCACATTAAAAAAGc > 3:1635822/1‑151 (MQ=255) aGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGA‑CGC‑TTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGATCGAAGCCTCGTCCCCCAGCCACATTAAAAAAGCt > 2:201138/1‑151 (MQ=255) aGGTTCGAATCCTCGTACCCCAGCCAATTTAATAAAGA‑AGC‑TTACCTTGTAAGTGCACCAAGTGGGGGTAACTCCAAGCGGTAAGGCACAGGATTCTAGTTACGTCATTCCGAGGATCGAATCCTCGTCCCCCAGCAACATTAAAAAAGCt > 4:1387106/1‑151 (MQ=255) aGGTTCGAATCCTCGTACCCCAGCCAAATTATTAAAGA‑ACC‑TTACCTAGTAAGTGATCCAAGTATGGGTATCTGCAATCTGTAAGGCACAGTATTCTAATTCAATCATTCAGAGTATCGAAACCTCCTCCCCCAGCAAAATTAAAAAAGCt > 4:917296/1‑151 (MQ=255) tCGAATCCTCGTACCCCAGCCAATTTAATAAAGA‑AGC‑TTACCTTGTAAGTTAACCCAGTTGGGGTATCGACAAGCGCTAAGGCACAGGATTCTAATTAAGGCATTCAAAGTATCGAAACCTCGTCCCCCATCGACATAAAAAAAGCTCGCt > 4:402334/1‑151 (MQ=255) cGAATCCTCGTACCCCAGCCAATTTATTAAAGA‑CGC‑TTACCTTGTAAGTGCACCGAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCCGCCACATTAAAAAAGCTCTCtt > 1:1386778/1‑151 (MQ=255) tattttcttaagacAGCCATTATATTCAATT‑CTC‑TTAAATTGTAACTCCAATTTGTTTTGGTTTCGCCAATCGGTTAGGCACCGGTTTTTTATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAGCTCGCTTc < 8:919801/137‑1 (MQ=9) aaTCCTCGTACCCCAGCCAATTTATTCAAGA‑CGC‑TTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAGCTCGCTTCg > 6:451213/1‑151 (MQ=255) aaTCCTCGTACCCCAGCCAATTTATTCAAGA‑CGC‑TTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAGCTCGCTTCg > 2:806100/1‑151 (MQ=255) aaTCCTCGTACCCCAGCCAATTTATTAAAGA‑CGC‑TTACCTTGTAATTGCACCCAGTTGGGGTAGCGCCAAGCTGTAAGGCACCGTATTCTAATTCCGGCATTCAGAGGGTCGAATCATCGTACCCCCGCAACATTAAAAAAGATCGCTTCg > 1:348805/1‑151 (MQ=255) aaTCCTCGTACCCCAGCCAATTTATTAAAGA‑CGC‑TTACCTTGTAAGTGAACCAAGTTGGGGTATAGCCAAGCGGTAAGGCACAGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAGCTCGCTTCg > 4:726370/1‑151 (MQ=255) agccTCGTACCCCAGACACTTTCTTCAAGC‑CGC‑TTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAGCTCGCTTCgg < 1:744924/149‑1 (MQ=255) aTCCTCGTACCCCAGCCAATTTATTCAAGA‑CGC‑TTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAGCTCGCTTCgg > 7:1659753/1‑151 (MQ=255) tCCTCGTACCCCAGCCAATTTATTCAAGA‑CGC‑TTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAATGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCATCGTACCCCAGCAACATTAAAAAAGCTCGCTTCGGc > 6:1163729/1‑151 (MQ=255) tCCTCGTACCCCAGCCAATTTATTCAAGA‑CGC‑TTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAGCTCGCTTCGGc > 8:1588814/1‑151 (MQ=255) tCCTCGTACCCCAGCCAATTTATTCAAGA‑CGC‑TTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAGCTCGCTTCGGc > 2:1860916/1‑151 (MQ=255) ccTCGTACCCCAGCCAATTTATTCAAGA‑CGC‑TTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAGCTCGCTTCGGCg > 7:648535/1‑151 (MQ=255) cTCGTACCCCAGCCAATTTATTCAAGA‑CGC‑TTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAGCTCGCTTCGGCg > 2:1276111/1‑150 (MQ=255) cTCGTACCCCAGCCAATTTATTCAAGA‑CGC‑TTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAGCTCGCTTCGGCg > 3:789603/1‑150 (MQ=255) cTCGTACCCCAGCCAATTTATTCAAGA‑CGC‑TTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAGCTCGCTTCGGCg > 8:1064336/1‑150 (MQ=255) cGTACCCCAGCCAATTTATTCAAGA‑CGC‑TTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAGCTCGCTTCGGCGAGc > 5:862792/1‑151 (MQ=255) tACCCCAGCCAATTTATTCAAGA‑CGC‑TTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAGCTCGCTTCGGCGAGCtt > 1:434811/1‑151 (MQ=255) aCCCCAGCCAATTTATTCAAGA‑CGC‑TTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAGCTCGCTTCGGCGAGCttt > 1:1069225/1‑151 (MQ=255) ccccAGCCAATTTATTCAAGA‑CGC‑TTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAGCTCGCTTCGGCGAGCtttt > 3:1700664/1‑151 (MQ=255) cccAGCCACTATATTAAATA‑CTC‑TGACCAAGAAACCGCAACAAGATGTCGTATCCCCAAGCGGTAAGGCACCGGATTCCAATTCCGGGCTTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAGCTCGCTTCGGCGAGCttttt < 1:1307118/151‑1 (MQ=16) accAGACAATATCTTAAAGA‑TTC‑TTAACATTTAATTGCAACTAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAGCTCGCTTCGGCGAGCttttt < 6:1557339/150‑1 (MQ=18) cAATTTATTCAAGA‑CGC‑TTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAGCTCGCTTCGGCGAGCTTTTTGCtttt > 6:990554/1‑151 (MQ=255) cAATATATTAAAGA‑CCC‑ATACCATGTAAGTGCACCCAGATCCGGTATCGCCAAGCCGTAAGGCACCGGATTCTAATTCCGGAATTCCTAGGATCGAATCCTCGTACCCCAGCCACATTAAAAAAGCTAGCTTCGGCCACCATTTTGCtatt > 6:1277836/1‑151 (MQ=18) aaTTTATTCAAGA‑CGC‑TTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAGCTCGCTTCGGCGAGCTTTTTGCtttt > 5:1736772/1‑150 (MQ=255) aaTTTATTCAAGA‑CGC‑TTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAGCTCGCTTCGGCGAGCTTTTTGCTTTTc > 3:143630/1‑151 (MQ=255) tttATTCAAGA‑CGC‑TTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAGCTCGCTTCGGCGAGCTTTTTGCTTTTCTg > 6:1382417/1‑151 (MQ=255) ttATTCAAGA‑CGC‑TTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAGCTCGCTTCGGCGAGCTTTTTGCTTTTCTGc > 1:166118/1‑151 (MQ=255) ttATTCAAGA‑CGC‑TTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTA‑CCCAGCCACATTAAAAAAGCTCGCTTCGGCGAGCTTTTTGCTTTTCTGCg > 7:1568326/1‑151 (MQ=255) tATTCAAGA‑CGC‑TTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAGCTCGCTTCGGCGAGCTTTTTGCTTTTCTGCg > 3:1275849/1‑151 (MQ=255) tATTCAAGA‑CGC‑TTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGAACCCCAGCCACATTAAAAAAGCTCGCTTCGGCGAGCTTTTTGCTTTTCTGCg > 3:328858/1‑151 (MQ=255) aTTCAAGA‑CGC‑TTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAGCTCGCTTCGGCGAGCTTTTTGCTTTTCTGCGt > 8:686002/1‑151 (MQ=255) ttCAAGA‑CGC‑TTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAGCTCGCTTCGGCGAGCTTTTTGCTTTTCTGCGtt > 8:1824703/1‑151 (MQ=255) tCAAGA‑CGC‑TTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAGCTCGCTTCGGCGAGCTTTTTGCTTTTCTGCGttc > 8:816750/1‑151 (MQ=255) | CGAATCCCGTCGTAGCCACCAAATTCTGAATGTATCGAATATGTTCGGCAAATTCAAAACCAATTTGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGA‑CGC‑TTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAGCTCGCTTCGGCGAGCTTTTTGCTTTTCTGCGTTC > DH1/3184435‑3184734 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |