| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | DH1 | 3,913,413 | T→G | intergenic (+79/‑175) | yjjA → / → opgB | hypothetical protein/phosphoglycerol transferase I |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | DH1 | 3,913,413 | 0 | T | G | 98.6% | 2251.0 / 9.3 | 580 | intergenic (+79/‑175) | yjjA/opgB | hypothetical protein/phosphoglycerol transferase I |
| Reads supporting (aligned to +/- strand): ref base T (4/4); new base G (264/308); total (268/312) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.88e-01 | |||||||||||
Only 100 of 582 total aligned reads displayed.
GCTGGCAGAAAAGGTGAAAACCAAAGCCTGCGATCTGGTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTTACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGCCATTACATTGTGCTTCTCAAAAAGCTTAAACGTTGGCTA > DH1/3913265‑3913559 | cAGAAAAGGTGAAAACCAAAGCCTGCGATCTGGTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTg < 7:171540/151‑1 (MQ=255) aGAAAAGGTGAAAACCAAAGCCTGCGATCTGGTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGt < 4:939986/151‑1 (MQ=255) gAAAAGGTGAAAACCAAAGCCTGCGATCTGGTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGtt < 4:1778091/151‑1 (MQ=255) aaaaGGTGAAAACCAAAGCCTGCGATCTGGTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGtt > 1:1765595/1‑150 (MQ=255) aGGTGAAAACCAAAGCCTGCGATCTGGTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTacac < 3:425183/151‑1 (MQ=255) tGAAAACCAAAGCCTGCGATCTGGTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACggg > 3:622779/1‑151 (MQ=255) aaaCCAAAGCCTGCGATCTGGTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGCCGGTTTGACCCCTGATACACGGGa > 2:1580084/1‑149 (MQ=255) aCCAAAGCCTGCGATCTGGTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTg > 6:493726/1‑151 (MQ=255) acAAAGCCTGCGATCTGGTGTTAAAACAGGGCCTGCACTTCATTTCCAGAACCGCGAAACGCCCCGTGATAGCTGTTACCCGGCTGACGCGCCTCTCTACTGCCCTATTACCTGCTCCAGGAACGTTTGCCCACTCTTACACGGCAAGtt > 3:1333922/2‑149 (MQ=255) aaaGCCTGCGATCTGGTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGAcc < 4:1575073/151‑1 (MQ=255) aGCCTGCGATCTGGTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGt > 1:279226/1‑151 (MQ=255) gCCTGCGATCTGGTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGt > 1:1513435/1‑150 (MQ=255) gCCTGCGATCTGGTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGt > 1:137898/1‑150 (MQ=255) ccTGCGATCTGGTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTaa < 8:1069346/151‑1 (MQ=255) tGCGATCTGGTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATc > 7:547607/1‑151 (MQ=255) gCGATCTGGTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAAt < 1:502078/149‑1 (MQ=255) cGATCTGGTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCa > 5:1187068/1‑150 (MQ=255) cTGGTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCaaaaa > 3:1616814/1‑150 (MQ=255) ggTGTTAAAACAGGGGCTGAAGTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGATCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGt < 8:557555/151‑1 (MQ=255) ggTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCaaa < 4:78550/146‑1 (MQ=255) ggTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCaaa < 7:1358673/146‑1 (MQ=255) ggTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCaaa < 7:384735/146‑1 (MQ=255) ggTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTCGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGt < 5:518418/151‑1 (MQ=255) ggTGTTAAAACAGGGGCTGAACTTCATCTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGt < 6:1240289/151‑1 (MQ=255) gtTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGTGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCt < 5:1900545/150‑1 (MQ=255) gtTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCt < 4:580570/150‑1 (MQ=255) gtTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTg < 5:1498158/151‑1 (MQ=255) gtTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTg < 1:1947730/151‑1 (MQ=255) tAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGtt > 8:460401/1‑151 (MQ=255) aaaaCAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGttt > 8:780242/1‑151 (MQ=255) aaaCAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGttt > 3:1476892/1‑150 (MQ=255) aaaCAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTta < 3:1256122/151‑1 (MQ=255) aaCAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTtat < 3:1132176/151‑1 (MQ=255) aaCAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTtat < 7:1164445/151‑1 (MQ=255) ggggCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAAc < 4:1169936/151‑1 (MQ=255) cTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAAt > 8:1843458/1‑151 (MQ=255) gAACTTCATTTCCTGAAGCTCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGATTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTc < 2:311391/151‑1 (MQ=255) gAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAAt < 6:783971/149‑1 (MQ=255) tCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTaac > 8:1298201/1‑151 (MQ=255) tCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATC‑AAAAAGTCTGTTTATAAACTAATTCCTaac < 6:1632413/150‑1 (MQ=255) cATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTaaca < 5:316732/151‑1 (MQ=255) cATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTaac > 8:1159830/1‑150 (MQ=255) aTTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTaacaa < 5:1318717/151‑1 (MQ=255) aTTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTaaca > 1:63580/1‑150 (MQ=255) ttCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTACCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTaacaac < 1:1583532/150‑1 (MQ=255) ccTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACAt < 8:1366690/150‑1 (MQ=255) tGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGc > 7:1626925/1‑151 (MQ=255) aaCCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCAt > 7:1494765/1‑151 (MQ=255) aaCCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCGTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCAt > 4:1060090/1‑151 (MQ=255) ccGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCAttt < 7:72872/151‑1 (MQ=255) gtcgAAACGCCGCGTTTTAGCTGTTACGCTGCTGACGCGTCTCTCTTCTGACCTTTTCCCTGCTACTGGACGTTTTGACTCATGTTACACGTGAAGTGACCGTAATCAAAATAGTCTTTTTATAAACTAATTCCTAACAACATCGCAtttt < 6:1929785/149‑1 (MQ=255) gcgAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGGCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCAttttt < 6:911528/151‑1 (MQ=255) aaaCGGCGCGGTGTAGCTGTTACCCGGCTGACAGGGCTCGCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGAGCCCTGTTACACGGGAAGTGACCGTAATCAAAAACGTCTGTTTATAAACTAATTCCTAACAAAATCGCATTTTTTTg < 1:1082100/151‑1 (MQ=255) aaCGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACACCATCGCATTTTTTTg > 8:1663222/1‑150 (MQ=255) cgTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTTGa < 7:443598/151‑1 (MQ=255) gTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGa > 1:1002077/1‑150 (MQ=255) tttAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAAtt > 3:277647/1‑151 (MQ=255) ttAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAAtt < 6:1105191/150‑1 (MQ=255) tAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTgc > 1:722943/1‑151 (MQ=255) tGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTgcagc > 3:1796992/1‑150 (MQ=255) tGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTgcagc > 3:833602/1‑150 (MQ=255) tACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAat > 1:839297/1‑150 (MQ=255) aCCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAata < 2:984604/150‑1 (MQ=255) cccGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATg > 5:603957/1‑151 (MQ=255) cccGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATg > 2:1386635/1‑151 (MQ=255) cGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGc < 4:123480/151‑1 (MQ=255) gCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGa < 7:1262610/151‑1 (MQ=255) gCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGAAGCAATATGGCg > 2:1143097/1‑150 (MQ=255) tGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACg > 2:1863921/1‑151 (MQ=255) gACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGc > 5:1050084/1‑151 (MQ=255) gACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGc > 5:733252/1‑151 (MQ=255) cgcgGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGCCa < 6:1519485/151‑1 (MQ=255) cgGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGCCAtt > 8:1013121/1‑151 (MQ=255) ggCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGCCATTa < 5:891672/151‑1 (MQ=255) gCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGCCATTAc > 5:1806989/1‑151 (MQ=255) gCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGCCATTAc < 6:1376903/151‑1 (MQ=255) ctctctCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGCCCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCGGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGCCATTAc > 2:101217/1‑150 (MQ=255) ctctcCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGCCATTACa < 6:170249/149‑1 (MQ=255) ctctcCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGCCATTACAtt > 1:455617/1‑151 (MQ=255) ccTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGCCATTACATtgt < 2:258025/149‑1 (MQ=255) ccTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGCCATTACATtgt < 1:396058/149‑1 (MQ=255) cTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGCCATTACATTGTGCt > 1:1243009/1‑151 (MQ=255) gCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGCCATTACATTGTGCt < 7:1858982/149‑1 (MQ=255) ttCCCTGCTCCTGGACTGTTTGACCCCTGTTACACGTGAAGTTACCGTAATCAAAAAAGTCTTTTTAAAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGCCATTACATTGTGCTTCTCaaa < 5:1634729/150‑1 (MQ=255) ttCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGCCATTACATTGTGCTTCTCaaa < 5:839237/150‑1 (MQ=255) ttCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGCCATTACATTGTGCTTCTCaaa > 7:890740/1‑150 (MQ=255) tCCCTTCTCCTGTACTGTTTGACCCCTGTTTTATGTGAATTTATCGTAATCAAAAAATTCTGTTTATAAACTAATTCCTAACAACATCTCATTTTTTTGACACTAGAATTGCAGCAATATGGCTACGCCATTACATTGTGCTTCTCaaaa < 8:363248/150‑1 (MQ=255) tCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACTCCATTACATTGTGCTTCTCaaaa > 4:1662563/1‑150 (MQ=255) cccTGGTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGCCATTACATTGTGCTTCTCAAAAAg < 6:626243/151‑1 (MQ=255) cccTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGCCATTACATTGTGCTTCTCaaaaa < 6:255834/150‑1 (MQ=255) cTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAAGCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGACATTACATTGTGGTTCTCAAAAAGCATa > 7:1020538/1‑150 (MQ=255) cTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGCCATTACATTGTGCTTCTCAAAAAGCTTAAACg > 1:1167847/1‑151 (MQ=255) tGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGCCATTACATTGTGCTTCTCAAAAAGCTTAAACGt > 8:687010/1‑151 (MQ=255) ggACGGTTTGACTCCTGTTACAAGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTATCAACATCGCATTTTTTTGACACTAGAATTGCAGCATTATGGCGACGCCATTACATTGTGCTTCTCAAAAAGCTTAAAc < 4:304233/148‑1 (MQ=255) gACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGCCATTACATTGTGCTTCTCAAAAAGCTTAAACGTTg < 2:803181/151‑1 (MQ=255) gACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGCCATTACATTGTGCTTCTCAAAAAGCTTAAACGTTg < 2:482724/151‑1 (MQ=255) gACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGCCATTACATTGTGCTTCTCAAAAAGCTTAAACGTTg > 4:475310/1‑151 (MQ=255) cGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGCCATTACATTGTGCTTCTCAAAAAGCTTAAACGTTGGc > 3:234367/1‑151 (MQ=255) ggTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGCCATTACATTGTGCTTCTCAAAAAGCTTAAACGTTGGCt > 2:1704836/1‑151 (MQ=255) gTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGCCATTACATTGTGCTTCTCAAAAAGCTTAAACGTTGGCt > 5:1523051/1‑150 (MQ=255) | GCTGGCAGAAAAGGTGAAAACCAAAGCCTGCGATCTGGTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTTACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGCCATTACATTGTGCTTCTCAAAAAGCTTAAACGTTGGCTA > DH1/3913265‑3913559 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |