| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | DH1 | 4,137,730 | C→A | intergenic (‑24/+152) | sugE ← / ← ecnB | quaternary ammonium compound‑resistance protein SugE/entericidin B |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | DH1 | 4,137,730 | 0 | C | A | 98.7% | 2516.7 / 14.4 | 671 | intergenic (‑24/+152) | sugE/ecnB | quaternary ammonium compound‑resistance protein SugE/entericidin B |
| Reads supporting (aligned to +/- strand): ref base C (5/4); new base A (336/326); total (341/330) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.82e-01 | |||||||||||
Only 100 of 671 total aligned reads displayed.
CTGACAATCATCGCCGTCACAGTAATAACACTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGACACAGCTGTCGTACCGTTA > DH1/4137582‑4137877 | cTGACAATCATCGCCGTCACAGTAATAACACTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGt > 6:946165/1‑151 (MQ=255) gACAATCATCGCCGTCACAGTAATAACACTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTc < 4:1205490/150‑1 (MQ=255) aCAATCATCGCCGTCACAGTAATAACACTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTccc > 4:6252/1‑151 (MQ=255) aaTCATCGCCGTCACAGTAATAACACTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCg > 6:1404225/1‑151 (MQ=255) atcGCCGTCACAGTAATAACACTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTg > 8:1255353/1‑150 (MQ=255) atcGCCGTCACAGTAATAACACTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTg > 1:1912646/1‑150 (MQ=255) cGCCGTCACAGTAATAACACTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGaaa < 7:870672/151‑1 (MQ=255) gCCGTCACAGTAATAACACTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGaaa > 7:999109/1‑150 (MQ=255) cGTCACAGTAATAACACTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGCCCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGaaa > 8:1123119/1‑148 (MQ=255) cGTCACAGTAATAACACTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGaaa > 6:1175475/1‑148 (MQ=255) cacaGTAATAACACTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGc < 6:702712/151‑1 (MQ=255) acaGTAATAACACTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACATCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCACCGGTGAAAAGAGGCg > 2:1307242/1‑151 (MQ=255) taataaCACTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTg > 1:232930/1‑151 (MQ=255) taataaCACTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTg > 1:1002260/1‑151 (MQ=255) aataaCACTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGc > 4:331896/1‑151 (MQ=255) ataaCACTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCa < 2:613/151‑1 (MQ=255) acacTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCGGTGAAAAGAGGCGTTTGCAGgt < 1:796853/151‑1 (MQ=255) cGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTcc < 3:515384/151‑1 (MQ=255) aaaCGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCaa > 2:833641/1‑149 (MQ=255) aaaCGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAg < 1:1294106/151‑1 (MQ=255) aCGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCt > 7:646693/1‑151 (MQ=255) cTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATg > 2:736490/1‑151 (MQ=255) cTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCACCGGTGAAAAGAGGCGTTTGCACGTCGTCCTGCAAAGatgatg > 5:1879274/1‑151 (MQ=255) cTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCACGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTTCATGTCGTCCTGCAAAGCTGATg > 5:1271041/1‑151 (MQ=255) cTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATAACACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTCGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTACTGCAAAGCTGAtt > 3:412011/1‑150 (MQ=255) aaaGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGt > 4:1144510/1‑151 (MQ=255) aGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTg > 7:747271/1‑151 (MQ=255) ccGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGa > 5:1417989/1‑150 (MQ=255) gTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACg < 1:1062996/151‑1 (MQ=255) gggTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGa < 5:1710505/151‑1 (MQ=255) ggTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGat < 5:728871/151‑1 (MQ=255) gTATATTTCAGGCCAACGGCCTATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGata < 5:238572/151‑1 (MQ=255) atatTTCAGTCCAACGTGCCATACCACTTCCAGCAGACCATCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGGCCCCGGTGAAAAGAGGCGGTTGCAGGTCGTCCTGCAAATCTGATGGTTGAACGGATAtt < 7:1594776/151‑1 (MQ=255) atTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATAtttt > 6:1269292/1‑151 (MQ=255) atTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATAtttt < 6:272462/151‑1 (MQ=255) cAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGcc < 2:486957/150‑1 (MQ=255) aGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAg < 7:1730308/151‑1 (MQ=255) ccAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGGCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTg < 4:985813/151‑1 (MQ=255) cAACGGCCCTTACCACTTCCAGCAGTCCTTCAATAACTAAGATATTGCAGCACATATCAGGCTCCGGAGAATTGGCGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGTTATTTTGCCAGGTgg < 4:1492328/151‑1 (MQ=255) cAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTgg > 4:1011828/1‑151 (MQ=255) aaCGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGc < 1:1353301/151‑1 (MQ=255) aaCGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGc < 4:414518/151‑1 (MQ=255) ggCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAgg < 7:1414347/151‑1 (MQ=255) gCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAggg > 6:1856728/1‑151 (MQ=255) cccATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAgggg > 3:623963/1‑151 (MQ=255) cccATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAgggg < 8:415086/151‑1 (MQ=255) ccATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGa < 1:504165/151‑1 (MQ=255) aTACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAAt < 1:1733083/151‑1 (MQ=255) aTACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAAt > 6:828032/1‑151 (MQ=255) aTACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGCTGGCAAGGGAAt > 3:899173/1‑151 (MQ=255) aCCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAAtt < 1:732828/150‑1 (MQ=255) ccACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGAGATATCAGGCTCCGGAGAATTGGGGCAGTCCGCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAAGGGATATTTTGCCTGGTGGCAGGGGAAtttg > 4:723349/1‑150 (MQ=255) ccACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCTGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTc < 4:1937578/151‑1 (MQ=255) ccACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTACAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTc > 5:1171387/1‑151 (MQ=255) ttCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACt > 5:310651/1‑151 (MQ=255) tCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACt < 7:1893279/150‑1 (MQ=255) ccAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTAt > 6:1121660/1‑151 (MQ=255) ccAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTa < 5:1067402/150‑1 (MQ=255) cagcagACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTAtt < 7:532252/151‑1 (MQ=255) agcagcCCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTa < 5:989848/151‑1 (MQ=255) agcagACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGGCGTCCTGCAAAGCTGATGGTTGAACGGATAATTTGCCAGGTGGCAGGTGAATTTCAACTATTa < 5:1479377/151‑1 (MQ=255) cagACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATAAc > 2:346114/1‑150 (MQ=255) agACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCt < 4:1815937/151‑1 (MQ=255) agACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCt < 7:1180318/151‑1 (MQ=255) aCCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCttt < 3:1763264/151‑1 (MQ=255) aCCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCttt < 5:1632077/151‑1 (MQ=255) cAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTtgt < 8:1684913/151‑1 (MQ=255) gCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGa < 4:1605330/151‑1 (MQ=255) gCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGa < 6:1663536/151‑1 (MQ=255) gCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGGCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGa < 3:134162/151‑1 (MQ=255) cAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGAc > 1:1626500/1‑151 (MQ=255) cAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGAc < 1:1152809/151‑1 (MQ=255) cAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGAc > 1:352886/1‑151 (MQ=255) aTAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACt > 2:1530609/1‑150 (MQ=255) tAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTAt > 5:85087/1‑151 (MQ=255) tAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGc > 8:1358223/1‑150 (MQ=255) aaGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGc > 1:1437017/1‑149 (MQ=255) aaGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAg < 3:225764/151‑1 (MQ=255) aGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGc > 6:403931/1‑148 (MQ=255) aGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGa < 7:1359170/151‑1 (MQ=255) aTAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGaa > 5:562621/1‑150 (MQ=255) aTCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGaaaaa > 4:1387961/1‑150 (MQ=255) tCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAaaac > 8:595028/1‑151 (MQ=255) ccAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTAGTACCTTTGTGACTATCGCAGAAAaaac > 8:821550/1‑150 (MQ=255) aGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAaaacaaa < 3:1084256/151‑1 (MQ=255) aGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAaaacaa > 6:1488036/1‑150 (MQ=255) aGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAaaacaa > 3:1446150/1‑150 (MQ=255) ggACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAaaacaaac > 1:610753/1‑151 (MQ=255) atatCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTACAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGc > 2:1613415/1‑150 (MQ=255) tatCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCAc > 7:285454/1‑151 (MQ=255) atCAGGCTCCGGAGAATTGGGGCAGGCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACg < 2:1844392/151‑1 (MQ=255) tCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACg > 2:1040557/1‑150 (MQ=255) cAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGac > 2:1962629/1‑151 (MQ=255) aGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGaca < 4:1695209/151‑1 (MQ=255) gCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACCGCACGacac > 8:292709/1‑150 (MQ=255) ccGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGACACAGCt > 8:1533339/1‑151 (MQ=255) ggAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGCCACAGCTGt > 6:573415/1‑151 (MQ=255) ggAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGACACAGCTGt > 8:1860385/1‑151 (MQ=255) gagaATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGACACAGCTGTc < 4:888314/151‑1 (MQ=255) ggggCAGGCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGGTGTTGGTTGAACTGATATTTTGCCAGGTGTCAGGGTATTTTCAACTATTACCTTTGTCACTATCGCTTAAAAAACAAACGGCACGACACAGCTGTCGTACCGt < 2:971680/151‑1 (MQ=255) | CTGACAATCATCGCCGTCACAGTAATAACACTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGACACAGCTGTCGTACCGTTA > DH1/4137582‑4137877 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |