| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | DH1 | 4,547,561 | C→G | A165P (GCA→CCA) | rho ← | transcription termination factor Rho |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | DH1 | 4,547,561 | 0 | C | G | 99.2% | 2340.7 / 4.6 | 613 | A165P (GCA→CCA) | rho | transcription termination factor Rho |
| Reads supporting (aligned to +/- strand): ref base C (1/4); new base G (268/336); total (270/343) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.90e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.66e-01 | |||||||||||
Only 100 of 613 total aligned reads displayed.
CCGGACGTTCGTCGATCAGCAGAACCATCAGCACACAATCCGGGTGGTTGTAAGCAATGCTCTGAGCAATGTTCTGCAGCAGCATGGTTTTACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGCCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCGGGGTTAAGTTCTCAAAGA‑GGATTTTGTTGCGGGCGTTTTCAGGTTTGTCGAAGTTAACTTCGTTAAC > DH1/4547414‑4547708 | ccGGACGTTCGTCGATCAGCAGAACCATCAGCACACAATCCGGGTGGTTGTAAGCAATGCTCTGAGCAATGTTCTGCAGCAGCATGGTTTTACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCa < 5:251073/150‑1 (MQ=255) aCGTTCGTCGATCAGCAGAACCATCAGCACACAATCCGGGTGGTTGTAAGCAATGCTCTGAGCAATGTTCTGCAGCAGCATGGTTTTACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATcc > 5:1814171/1‑151 (MQ=255) cGTTCGTCGATCAGCAGAACCATCAGCACACAATCCGGGTGGTTGTAAGCAATGCTCTGAGCAATGTTCTGCAGCAGCATGGTTTTACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCa < 1:1344516/151‑1 (MQ=255) gTTCGTCGATCAGCAGAACCATCAGCACACAATCCGGGTGGTTGTAAGCAATGCTCTGAGCAATGTTCTGCAGCAGCATGGTTTTACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATcc > 6:398216/1‑149 (MQ=255) cgtcgATCAGCAGAACCATCAGCACACAATCCGGGTGGTTGTAAGCAATGCTCTGAGCAATGTTCTGCAGCAGCATGGTTTTACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTa < 6:123051/150‑1 (MQ=255) cgtcgATCAGCAGAACCATCAGCACACAATCCGGGTGGTTGTAAGCAATGCTCTGAGCAATGTTCTGCAGCAGCATGGTTTTACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTAc > 2:865224/1‑151 (MQ=255) cgtcgATCAGCAGAACCATCAGCACACAATCCGGGTGGTTGTAAGCAATGCTCTGAGCAATGTTCTGCAGCAGCATGGTTTTACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTAc > 5:680611/1‑151 (MQ=255) gtcgATCAGCAGAACCATCAGCACACAATCCGGGTGGTTGTAAGCAATGCTCTGAGCAATGTTCTGCAGCAGCATGGTTTTACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTAcg < 2:529251/151‑1 (MQ=255) cgATCAGCAGAACCATCAGCACACAATCCGGGTGGTTGTAAGCAATGCTCTGAGCAATGTTCTGCAGCAGCATGGTTTTACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTAcgcg < 2:1166916/151‑1 (MQ=255) aTCAGCAGAACCATCAGCACACAATCCGGGTGGTTGTAAGCAATGCTCTGAGCAATGTTCTGCAGCAGCATGGTTTTACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTAcgcg > 7:441434/1‑149 (MQ=255) tCAGCAGAACCATCAGCACACAATCCGGGTGGTTGTAAGCAATGCTCTGAGCAATGTTCTGCAGCAGCATGGTTTTACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGc > 1:1035221/1‑151 (MQ=255) cagcagAACCATCAGCACACAATCCGGGTGGTTGTAAGCAATGCTCTGAGCAATGTTCTGCAGCAGCATGGTTTTACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGc < 5:561836/150‑1 (MQ=255) cagcagAACCATCAGCACACAATCCGGGTGGTTGTAAGCAATGCTCTGAGCAATGTTCTGCAGCAGCATGGTTTTACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCa < 7:135636/151‑1 (MQ=255) cagAACCATCAGCACACAATCCGGGTGGTTGTAAGCAATGCTCTGAGCAATGTTCTGCAGCAGCATGGTTTTACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGCTCCAGTACGCGAGCAGtt > 6:448698/1‑151 (MQ=255) aCCATCAGCACACAATCCGGGTGGTTGTAAGCAATGCTCTGAGCAATGTTCTGCAGCAGCATGGTTTTACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATTGCAGATCCAGTACGCGAGCAGTTAAAt < 1:1871067/151‑1 (MQ=255) aCCATCAGCACACAATCCGGGTGGTTGTAAGCAATGCTCTGAGCAATGTTCTGCAGCAGCATGGTTTTACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAAt < 1:556270/151‑1 (MQ=255) aCCATCAGCACACAATCCGGGTGGTTGTAAGCAATGCTCTGAGCAATGTTCTGCAGCAGCATGGTTATACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACAACGACCGATAGGTGATCGCAGATCCAGTACGCGAGCAGTTaaa > 6:1477769/1‑150 (MQ=255) ccATCAGCACACAATCCGGGTGGTTGTAAGCAATGCTCTGAGCAATGTTCTGCAGCAGCATGGTTTTACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATc > 2:1431694/1‑151 (MQ=255) aTCAGCACACAATCCGGGTGGTTGTAAGCAATGCTCTGAGCAATGTTCTGCAGCAGCATGGTTTTACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCtt > 4:1705721/1‑151 (MQ=255) cAGCACACAATCCGGGTGGTTGTAAGCAATGCTCTGAGCAATGTTCTGCAGCAGCATGGTTTTACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTc < 6:598680/150‑1 (MQ=255) cAGCACACAATCCGGGTGGTTGTAAGCAATGCTCTGAGCAATGTGCTGCAGCAGCATGGTTTTACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCa < 3:1739684/151‑1 (MQ=255) acaATCCGGGTGGTTGTAAGCAATGCTCTGAGCAATGTTCTGCAGCAGCATGGTTTTACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGaa < 5:1261268/151‑1 (MQ=255) acaATCCGGGTGGTTGTAAGCAATGCTCTGAGCAATGTTCTGCAGCAGCATGGTTTTACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGa > 4:1229468/1‑150 (MQ=255) aTCCGGGTGGTTGTAAGCAATGCTCTGAGCAATGTTCTGCAGCAGCATGGTTTTACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCg < 1:1145194/151‑1 (MQ=255) aTCCGGGTGGTTGTAAGCAATGCTCTGAGCAATGTTCTGCAGCAGCATGGTTTTACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCg > 3:1010565/1‑151 (MQ=255) ccGGGTGGTTGTAAGCAATGCTCTGAGCAATGTTCTGCAGCAGCATGGTTTTACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGt < 7:1746926/150‑1 (MQ=255) gggTGGTTGTAAGCAATGCTCTGAGCAATGTTCTGCAGCAGCATGGTTTTACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTAc < 3:957240/151‑1 (MQ=255) ggtTGTAAGCAATGCTCTGAGCAATGTTCTGCAGCAGCATGGTTTTACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACg < 4:18953/151‑1 (MQ=255) tGTAAGCAATGCTCTGAGCAATGTTCTGCAGCAGCATGGTTTTACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTc > 4:215525/1‑151 (MQ=255) gTAAGCAATGCTCTGAGCAATGTTCTGCAGCAGCATGGTTTTACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGAGATGGCAGATCCAGTACGCGAGCAGTTAAATCATCAGTAGATACGTAACCACGTTc > 8:404667/1‑150 (MQ=255) aaGCAATGCTCTGAGCAATGTTCTGCAGCAGCATGGTTTTACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCa < 2:76411/150‑1 (MQ=255) aaGCAATGCTCTGAGCAATGTTCTGCAGCAGCATGGTTTTACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCAt < 8:1092705/151‑1 (MQ=255) aGCAATGCTCTGAGCAATGTTCTGCAGCAGCATGGTTTTACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCAt > 2:208503/1‑150 (MQ=255) ccAATGGGCTGCGCAATGTTCTGCAGCAGCATGGGTTTACCGGCTTTCGGCGGTGCCACAATCACACCACGCTTACCACGACCCATAGGTGATGGCACATGCAGTACGCGCGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATAc < 1:399702/150‑1 (MQ=255) aaTGCTCTGAGCAATGTTCTGCAGCAGCATGGTTTTACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGc > 4:1815885/1‑151 (MQ=255) aTGCTCTGAGCAATGTTCTGCAGCAGCATGGTTTTACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCa < 5:1090767/151‑1 (MQ=255) gCTCTGAGCAATGTTGTGCATCAGCATGGTTTTACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGTCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGa < 3:798587/151‑1 (MQ=255) ctGAGCAATGTTCTGCAGCAGCATGGTTTTACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGAAGACg > 3:1311903/1‑150 (MQ=255) cAATGTTCTGCAGCAGCATGGTTTTACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑Gtt > 6:175319/1‑151 (MQ=255) aaTGTTCTGCAGCAGCATGGTTTTACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑Gttt > 7:372179/1‑151 (MQ=255) aTGTTCTGCAGCAGCATGGTTTTACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTg > 5:855989/1‑151 (MQ=255) tGTTCTGCAGCAGCATGGTTTTACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGc > 4:956866/1‑151 (MQ=255) gcagcagcaTGGTTTTACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCa < 8:1247694/150‑1 (MQ=255) gcagcagcaTGGTTTTACCGGCTTTCGGCGGTGC‑‑CAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGc < 7:47183/150‑1 (MQ=255) agcaTGGTTTTACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCgggg > 7:1550348/1‑151 (MQ=255) gcaTGGTTTTACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCGGGGt < 4:1100324/151‑1 (MQ=255) gcaTGGTTTTACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCGGGGt < 6:828516/151‑1 (MQ=255) gcaTGGTTTTACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCGGGGt > 5:458773/1‑151 (MQ=255) caTGGTTTTACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCGGGGtt < 5:349234/151‑1 (MQ=255) caTGGTTTTACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCGGGGtt < 3:45566/151‑1 (MQ=255) aTGGTTTTACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCGGGGtt > 8:743744/1‑150 (MQ=255) ggTTTTACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCGGGGTTAAg < 7:832175/151‑1 (MQ=255) ttttACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCGGGGTTAAGtt > 2:1720251/1‑151 (MQ=255) tttACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCGGGGTTAAGtt < 5:1530179/150‑1 (MQ=255) ttACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCGGGGTTAAGTtc < 7:948205/150‑1 (MQ=255) ttACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGCCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCGGGGTTAAGTtc < 7:205625/150‑1 (MQ=255) tACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCGGGGTTAAGTtctc > 8:1475445/1‑151 (MQ=255) tACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCGGGGTTAAGTtct < 2:10506/150‑1 (MQ=255) tACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCGGGGTTAAGTtct < 3:1113326/150‑1 (MQ=255) aCCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCGGGGTTAAGTTCTCa < 2:1323354/151‑1 (MQ=255) ccGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCGGGGTTAAGTTCTCaa < 3:1465065/151‑1 (MQ=255) gCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCGGGGTTAAGTTCTCaa > 3:624880/1‑148 (MQ=255) ggcggTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCATTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCGGGGTTAAGTTCTCAAAGA‑GGAttt < 3:741039/151‑1 (MQ=255) ggcggTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCGGGGTTAAGTTCTCAAAGA‑GGAttt < 4:431782/151‑1 (MQ=255) cggTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCGGGGTTAAGTTCTCAAAGA‑GGATTttg > 7:1118560/1‑151 (MQ=255) ggTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCGGGGTTAAGTTCTCAAAGA‑GGATTttgt < 3:1607524/151‑1 (MQ=255) ggTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCGGGGTTAAGTTCTCAAAGA‑GGATTttgt > 3:24445/1‑151 (MQ=255) ggTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCGGGGTTAAGTTCTCAAAGA‑GGATTttgt < 8:605846/151‑1 (MQ=255) acaATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTT‑CCACCTTGCATACGCACGCGAGACGTTTG‑GTGCCACCGGGTTAACTTGTGAAACACGGTTTTTGTGGCggc > 8:261575/1‑150 (MQ=255) caATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCGGGGTTAAGTTCTCAAAGA‑GGATTTTGTTGCGGGc < 4:324541/151‑1 (MQ=255) caATCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCGGGGTTAAGTTCTCAAAGA‑GGATTTTGTTGCGGGc < 5:1649939/151‑1 (MQ=255) aaTCAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCGGGGTTAAGTTCTCAAAGA‑GGATTTTGTTGCGGGCg < 8:1630717/151‑1 (MQ=255) cAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCGGGGTTAAGTTCTCAAAGA‑GGATTTTGTTGCGGGCGttt > 4:920995/1‑151 (MQ=255) cAGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCGGGGTTAAGTTCTCAAAGA‑GGATTTTGTTGCGGGCGttt < 7:614074/151‑1 (MQ=255) cgACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCGGGGTTAAGTTCTCAAAGA‑GGATTTTGTTGCGGGCGtttt < 6:1044973/150‑1 (MQ=255) aGACCACGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCGGGGTTAAGTTCTCAAAGA‑GGATTTTGTTGCGGGCGtttt < 8:1762369/151‑1 (MQ=255) aCGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCGGGGTTAAGTTCTCAAAGA‑GGATTTTGTTGCGGGCGTTTTCAGGt > 2:376316/1‑151 (MQ=255) cGCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCGGGGTTAAGTTCTCAAAGA‑GGATTTTGTTGCGGGCGTTTTCAGGtt < 1:1648965/151‑1 (MQ=255) gCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGGAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCGGGGTTAAGTTCTCAAAGA‑GGATTTTGTTGCGGGCGTTTTCAGGttt < 3:1896925/151‑1 (MQ=255) gCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCGGGGTTAAGTTCTCAAAGA‑GGATTTTGTTGCGGGCGTTTTCAGGttt < 1:231447/151‑1 (MQ=255) gCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCGGGGTTAAGTTCTCAAAGA‑GGATTTTGTTGCGGGCGTTTTCAGGttt < 6:210888/151‑1 (MQ=255) gCTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCGGGGTTAAGTTCTCAAAGA‑GGATTTTGTTGCGGGCGGTTTCAGGttt > 4:811956/1‑151 (MQ=255) cTGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCGGGGTTAAGTTCTCAAAGA‑GGATTTTGTTGCGGGCGTTTTCAGGtt < 1:1472839/149‑1 (MQ=255) tGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCGGGGTTAAGTTCTCAAAGA‑GGATTTTGTTGCGGGCGTTTTCAGGTTTGt > 2:306409/1‑151 (MQ=255) tGACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAATAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCGGGGTTAAGTTCTCAAAGA‑GGATTTTGTTGCGGGCGTTTTCAGGTTTGt > 6:1391488/1‑151 (MQ=255) gACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCGGGGTTAAGTTCTCAAAGA‑GGATTTTGTTGCGGGCGTTTTCAGGTTTg < 8:1922963/149‑1 (MQ=255) gACCACGACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCGGGGTTAAGTTCTCAAAGA‑GGATTTTGTTGCGGGCGTTTTCAGGTTTg < 3:1521223/149‑1 (MQ=255) aCGACCGCTATGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCGGGGTTAAGTTCTCAAAGA‑GGATTTTGTTGCGGGCGTTTTCAGGTTTGTCGAAg < 2:1617389/151‑1 (MQ=255) gACCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCGGGGTTAAGTTCTCAAAGA‑GGATTTTGTTGCGGGCGTTTTCAGGTTTGTCGAAGtt < 7:1502390/151‑1 (MQ=255) agctaTAGGTGATGGCAGATCCAGTACGCGAGCAGTTAATTCTTCATTAGAAGCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCGGGGTTAAGTTCTCAAAGA‑GGATTTTGTTGCGGGCGTTTTCAGGTTTGTCGAAGtt < 6:973636/146‑1 (MQ=255) aCCGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCGGGGTTAAGTTCTCAAAGA‑GGATTTTGTTGCGGGCGTTTTCAGGTTTGTCGAAGTTa < 7:1891752/151‑1 (MQ=255) ccGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCGGGGTTAAGTTCTCAAAGA‑GGATTTTGTTGCGGGCGTTTTCAGGTTTGTCGAAGTTaa < 6:1630055/151‑1 (MQ=255) cGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCGGGGTTAAGTTCTCAAAGA‑GGATTTTGTTGCGGGCGTTTTCAGGTTTGTCGAAGTTaa > 4:1438216/1‑150 (MQ=255) cGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCGGGGTTAAGTTCTCAAAGA‑GGATTTTGTTGCGGGCGTTTTCAGGTTTGTCGAAGTTAAc < 4:1550176/151‑1 (MQ=255) cGATAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCGGGGTTAAGTTCTCAAAGA‑GGATTTTGTTGCGGGCGTTTTCAGGTTTGTCGAAGTTAAc < 1:850434/151‑1 (MQ=255) aTAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCGGGGTTAAGTTCTCAAAGA‑GGATTTTGTTGCGGGCGTTTTCAGGTTTGTCGAAGTTAACtt > 5:1896765/1‑151 (MQ=255) aTAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCGGGGTTAAGTTCTCAAAGA‑GGATTTTGTTGCGGGCGTTTTCAGGTTTGTCGAAGTTAACtt > 2:1820160/1‑151 (MQ=255) aTAGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCGGGGTTAAGTTCTCAAAGA‑GGATTTTGTTGCGGGCGTTTTCAGGTTTGTCGAAGTTAACtt > 4:665901/1‑151 (MQ=255) aGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCGGGGTTAAGTTCTCAAAGA‑GGATTTTGTTGCGGGCGTTTTCAGGTTTGTCGAAGTTAACTTCg < 5:797008/151‑1 (MQ=255) aGGTGATGGCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCGGGGTTAAGTTCTCAAAGA‑GGATTTTGTTGCGGGCGTTTTCAGGTTTGTCGAAGTTAACTTCg > 5:143666/1‑151 (MQ=255) | CCGGACGTTCGTCGATCAGCAGAACCATCAGCACACAATCCGGGTGGTTGTAAGCAATGCTCTGAGCAATGTTCTGCAGCAGCATGGTTTTACCGGCTTTCGGCGGTGCCACAATCAGACCACGCTGACCACGACCGATAGGTGATGCCAGATCCAGTACGCGAGCAGTTAAATCTTCAGTAGAACCGTTACCACGTTCCATACGCAGACGAGA‑GTTTGCGTGCAGCGGGGTTAAGTTCTCAAAGA‑GGATTTTGTTGCGGGCGTTTTCAGGTTTGTCGAAGTTAACTTCGTTAAC > DH1/4547414‑4547708 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |