| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | DH1 | 936,293 | 0 | T | . | 43.4% | 201.0 / 195.8 | 118 | intergenic (‑27/+7) | ECDH1_RS04620/ECDH1_RS04625 | tRNA‑Met/tRNA‑Met |
| Reads supporting (aligned to +/- strand): ref base T (54/10); new base . (49/0); total (105/13) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.69e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.23e-03 | |||||||||||
Only 100 of 119 total aligned reads displayed.
TACTGCTTTTACTTCATCAAATTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCTTTTTTTTACCCCGATCACGGA > DH1/936163‑936441 | tACTGCTTTTACTTCATCAAATTTGATTGGTTGCGGGGGCAGGATATGACCCCACGACCTTCGGCTTATCAGCCATACCAGCTACCATGCAGCTCCACCCCGCGTAAAAGTACTGC‑TTTAGTTCGTCAAATTTTAATTGGTTGCggggg > 1:452493/1‑149 (MQ=255) ggATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGGGTAGGCC‑GTGACTTCAGCGAAGTATATTTCGTTCCGCGGGGCGGTTTTGAACCGACGGCATTGGGGtttttagtgcgcccagc > 5:405707/1‑136 (MQ=2) gacgacCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGACGTATTTCAACAGACGACCTTAGGCTTATGAGACCGACTAGCTACCAGgctg > 8:1075308/1‑150 (MQ=14) ccGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCAGTGG‑ATg > 7:59620/1‑151 (MQ=255) cgaGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGcc < 1:1114550/107‑1 (MQ=255) cgaGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATgcgcc > 8:1075931/1‑150 (MQ=255) aGCTACCAGGCTGCTCCACCCCGCGTCACGGTAGTGG‑TTTACTTCATCAATGTTTTATTGGTTCCCCGGGGCGGATATCACCCGACGACATTGGGCTTATGATACCGCAGAGCTACCAGGCTGCTCCCCACCGCGTcaggcgatggtcact > 5:184006/1‑137 (MQ=2) cTACCAGGCTGCTCCACCCCGCGTCACCGTAGTGG‑GTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGTTTTGAACCGCCGACCTTCGGGTTATGAGGCCGACGAGCTACCAGGCTGCTCCCCCCCGCGTCCGTGG‑ATGGGCACtat > 7:213334/1‑151 (MQ=17) ctgctCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCCCTATACTCCGcg > 4:1069025/1‑150 (MQ=255) ctgctCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCACTATACTCCGCt > 8:605048/1‑151 (MQ=255) tgctCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTCGTTGCGGGGGCCGGATTTGAACAGCCGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGGGCACTATACTCCGCTc > 7:699807/1‑151 (MQ=255) gctCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGACGGATTTGAACCGACGACCTTAGGGATATGAGACCGAAAAGCTACCAGGCTACTCCACCCAGCGTCAGAGG‑ATGCTCACTATACTACGCTcg > 4:1339855/1‑151 (MQ=17) tCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCACTATACTCCGCTcgcg > 8:1309869/1‑151 (MQ=255) cACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCACTATACTCCGCTCGCGtt > 6:1096693/1‑151 (MQ=255) cACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCACTATACTCCGCTCGCGtt > 6:273952/1‑151 (MQ=255) aCCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGCCCTTCGGGTTATGAGCCCGCCGAGCTACCAGGCTGCTCCACCCCGCGTCCCAGT‑CTGCCCACTATACAccccactcgatt > 5:674393/1‑141 (MQ=11) ctcttcgtatctgTACTGC‑TTTTATTTATTCAATTTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCACTATACTCCGCTCGCGtt < 8:276822/137‑1 (MQ=17) ccccGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCCGGG‑ATGCGCACTATACTCCCCACTCGtttt > 3:1222472/1‑151 (MQ=11) ccccGCGTCACCGTACTGC‑TTTACTTCATAAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCACTATACTCCGCTCGCGtttt > 4:1439599/1‑151 (MQ=255) cccGCGTCACCGTACTGC‑TTTACTTCATCAAATTATAATTGGTTGCGGGGGCCGCATTTGAACCCACCACCTTCGGGTTATGAGCCCGACGAGCTACAAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCCCACTATACTCCGCTCGCGtttt > 6:937569/1‑150 (MQ=18) ccGCGTCACCGTACTGCTTTTACTTCATCAAATTTT‑ATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCAACCAGGCTGCTCCACCCCGCCTCACAGC‑AAGCCCACTATAcagcgatctattttta > 6:496492/1‑135 (MQ=11) cgcgTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCACTATACTCCGCTCGCGTTTTCAt > 3:1125562/1‑151 (MQ=255) gcgTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCACTATACTCCGCTCGCGTTTTCATg > 2:226650/1‑151 (MQ=255) cgTCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGAGG‑AATCGAACTATACACCGATAGAGTTTTCATGc > 6:1116387/1‑151 (MQ=11) cgTCACCGTACTGCTTTTAATACATAAAATTTT‑ATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCACTATACTCCGCTCGCGTTTTCATGc < 5:1115961/151‑1 (MQ=17) cgTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCACTATACTCCGCTCGCGTTTTCATGc > 2:1017407/1‑151 (MQ=255) cgTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCAGTGG‑ATGCGCACTATACTCCGCTCGCGTTTTCATGc > 5:753300/1‑151 (MQ=255) gTCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGGGG‑AAGCGCACTATACTCCGCTGGCGTTTTCGTggc > 6:1265816/1‑149 (MQ=11) gTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCACTATACTCCGCTCGCGTTTTCATga > 2:188508/1‑149 (MQ=255) gTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCACTATACTCCGCTCGCGTTTTCATGc > 6:747457/1‑150 (MQ=255) gTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCAGCGTCCGTGG‑ATGCGCACTATACTCCGCTCGCGTTTTCATGc > 2:181785/1‑150 (MQ=255) tCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCAATATACTACGCTCGGTTTttcattcac > 6:123464/1‑150 (MQ=11) tCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCCTGG‑ATTCGCACTATACACCAAACGAGTATTCATGCa > 6:1399320/1‑150 (MQ=1) tCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCACTATACTCCGCTCGCGTTTTCATGCa > 8:1374371/1‑150 (MQ=255) cACCGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGAACTATACTCCGCTCGCTTTTTCATGCAAc > 2:1046835/1‑151 (MQ=14) cACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCACTATACTCCGCTCGCGTTTTCATGCAAc > 3:1000854/1‑151 (MQ=255) aCCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCACTATACTCCGCTCGCGTTTTCATGCAAcc > 2:1453595/1‑151 (MQ=255) aCCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCACTATACTCCGCTCGCGTTTTCATGCAAcc > 7:308757/1‑151 (MQ=255) ccGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGGGG‑AATCCCACAATACAACCAACGCTTTTTCATGCAACCt > 5:1429601/1‑151 (MQ=11) ccGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGAGG‑ATTCGCACTATACTCCGCTAGATTTTTCATTCAACCt > 1:549364/1‑151 (MQ=11) ccGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGAGG‑ATGCGCACTATACTCCGATCGCGATTTCATTCAACCt > 7:382856/1‑151 (MQ=14) cGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGCGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCCTGG‑AGGCCGTGTCTACTACGCTGGGGTTTTCAttgcgccgt > 4:1274665/1‑143 (MQ=11) cGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGGGG‑AGGCGGCTTATACTGCGCTCGCTTTTTCCTGCAAGCtt > 3:1380246/1‑151 (MQ=11) cGTACTGC‑TTTTATTTCTTAAATTTTTATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCtt < 8:383129/151‑1 (MQ=18) cGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCtt > 8:608788/1‑151 (MQ=255) gTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCCCACTATACTCCGCACGCGttagatcggaagcgcc > 7:276600/1‑137 (MQ=11) tACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCACTATACTCCGCTATAGTTTTCATGCACCCtttt > 1:1280636/1‑151 (MQ=14) tACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGGGG‑ATGCGCACTATACTCCGCTGGAGTTTTCATGCACCCttgt > 3:1055489/1‑149 (MQ=14) tACTGCTTTTACTTAAT‑AAAATTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCACTATACTCCGCTCGCGtt < 5:30272/136‑1 (MQ=14) tACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCtttt > 2:1010807/1‑151 (MQ=255) tACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGCGTACGGATTTTAACCGACGACCTTCGGGTTATGAGCCCGACGAGCAACCAGGCTGCTCCACCCCGCGTCCGAGG‑ATGCCCACAATACTCCGCTACCGTTTTCATGCAACCattt > 6:1370357/1‑151 (MQ=18) aCTGCTTTTTCTTCAT‑AAATTTTCATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCttttt < 4:377539/151‑1 (MQ=18) aCTGCTTTTACTTCATCAAATTTT‑ATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCttttt < 8:1122506/151‑1 (MQ=255) aCTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCAGTATACTCCTATCGCTTTTTCATGCAGCCttttt > 7:1121986/1‑151 (MQ=14) aCTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGGGG‑AGGCGCACTATACTCCGCTCGCGTTTTCATGCAAccgtgtt > 3:94576/1‑146 (MQ=14) cTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCtttttt > 4:193241/1‑151 (MQ=255) tGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCttttttt > 8:308316/1‑151 (MQ=255) tGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCttttttt > 4:114606/1‑151 (MQ=255) tGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGACGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCAGTATACTCCGCTCGCGTTTTCATGCAACCttttttt > 2:1294760/1‑151 (MQ=255) gtttttACTTC‑TTAAAATTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCtttttttt < 7:258561/148‑1 (MQ=18) gC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCtttttttt > 8:584765/1‑151 (MQ=255) tcctttctttcataaaaTTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCtttttt < 3:323955/136‑1 (MQ=18) cttttACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATTCGCAGTATACTACGCAGGCGTTTTCATGCAACCtttttttt > 6:388815/3‑150 (MQ=17) cttttACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGAGG‑ATTCGCACTATACACCCATAGATTTTTGATGCAACCttattttt > 2:666349/3‑150 (MQ=11) cttttACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCCAGG‑ATTCGCACAATACAACAATATATATTTCATGCAACCtttttttt > 8:279334/3‑150 (MQ=1) c‑TTTACTTCATCAAATTTTATTTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCtttttttt > 2:873216/1‑150 (MQ=255) c‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCtttttttt > 7:631907/1‑150 (MQ=255) c‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCtttttttt > 8:435101/1‑150 (MQ=255) c‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCtttttttt > 1:1050674/1‑150 (MQ=255) ttttACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCCAGG‑AAGCGCAAACAACTCCTCTCGGCATTTCGTTCAACCttcattatac > 1:194625/2‑143 (MQ=11) ttttatttattaaaTTTTTATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCACTATACTCCGCTcgc < 8:615640/116‑1 (MQ=18) tttACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCTTTTTTTTAc > 6:127434/1‑151 (MQ=255) tttACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCAGTATACTCCGCTCTGTTTTTCCTGCCCCCGTTTTTTTaac > 1:1179076/1‑149 (MQ=14) tttACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCAGGGG‑ATGCCCATTATACTACGATCTCGATTTCGTGGAAGCgttctttaaac > 1:74733/1‑147 (MQ=1) ttACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCTTTTTTTTAcc > 1:1034243/1‑151 (MQ=255) ttACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGGGGACTATACTCCGATATAGTTTTCATGCACCCGTTTTTTTAgcc > 3:93984/1‑151 (MQ=14) ttACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCACTATACTCCGATCGGGTTTTCATGCAACCTTGTTGTTAacc > 6:334682/1‑151 (MQ=17) ttACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGGGG‑ATGCGCACTATACTACGCTAGGGTTTTCATTCAGCCTTGTTTTTAacc > 5:1049977/1‑151 (MQ=14) ttACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCCCGGAATGCG‑ACAATACTGCAATCTCTTATTCCTGCAACCGTTCTTTTagc > 3:711050/1‑148 (MQ=11) ttACTTAAT‑AAATTTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCACTATACTCCGCTCGCGttt < 7:464528/129‑1 (MQ=255) tACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGT‑ATTCGCACTATACTCCGCAATAGTTTTCATGCAACCTTTTTTTTaacac > 4:341005/1‑147 (MQ=17) tACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCTTTTTTTTAcccc > 6:355967/1‑151 (MQ=255) tACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGGGG‑AATCGAACTATACAACCCTATAGATTTCATGCAACCTTTTTTTTaacac > 6:1320151/1‑147 (MQ=11) tACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCCGGT‑AGTGGGAGTATTCTCCGCACGGTTTTTCGTGCAAGCgttgtttttgccc > 7:1045223/1‑146 (MQ=11) cTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGGGG‑ATGCGCACTATACTCCGCTCGGGTTTTCGTGCAACCTTGTTTTTTCCCCgc > 1:179220/1‑150 (MQ=17) cTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCAGTGG‑AGGCGCACTATACTCCACTCGCTATTTCATTGAGCCGTTTTTTTAACCCg > 1:654294/1‑150 (MQ=14) ttCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCTTTTTTTTACCCCg > 8:1180578/1‑150 (MQ=255) ttCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑AGGCGCAGTATACTCCGCTCTCGTTTTCATGCACCCTTGTTGTTACCCCg > 5:860079/1‑149 (MQ=17) ttCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCCAGG‑ATGCGCACTATACTACGCTCGAGTTTTCATGCACCCgtattt > 4:325447/1‑141 (MQ=14) tcatcaAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCTTTTTTTTACCCCGAt > 8:471916/1‑151 (MQ=255) catcaAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCTTTTTTTTACCCCGATc > 3:441288/1‑151 (MQ=255) catcaAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCACTATACTCCGCACGCGTTTTCATGCACGCTTTTTTTTAaccccacac > 3:1453404/1‑146 (MQ=17) atcaAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCTTTTTTTTACCCCGATc > 1:146073/1‑150 (MQ=255) atcaAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCACTATACTCCGCTGGAGTTTTCATGCAACCTTTTTTTTACCCCGATCAc > 8:1227534/1‑151 (MQ=255) atcaAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCACTATACTACGCTAGAGTTTTCATGCAACCTTTTTTTTACCCCGATCAc > 4:163388/1‑151 (MQ=18) atcaAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCACTATACTACGATCGAGTTTTCATTCAACCTTTTTTTTTACCAGATCAc > 2:1283293/1‑151 (MQ=17) aaaTTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCTTTTTTTTACCCCGATCACgg > 7:1315646/1‑151 (MQ=255) aaTTTTTATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCTGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCTTTTTTTTACCCCGATCACGGa < 2:550609/151‑1 (MQ=255) aaTTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCTTTTTTTTAcccagctccccgg > 2:1050659/1‑141 (MQ=255) aaTTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCAGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCTTTTTTTTACCCCGATCACgg > 4:798634/1‑150 (MQ=255) | TACTGCTTTTACTTCATCAAATTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGG‑ATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCTTTTTTTTACCCCGATCACGGA > DH1/936163‑936441 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |