Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*DH12,169,5770TG27.7% 167.5 / 35.0 147R661R (CGA→CGC) rsxCelectron transporter RsxC
Reads supporting (aligned to +/- strand):  ref base T (14/88);  new base G (3/36);  total (21/126)
Fisher's exact test for biased strand distribution p-value = 3.99e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 147 total aligned reads displayed.

TGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGC‑GTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTCTTCTGG  >  DH1/2169428‑2169726
                                                                                                                                                      |                                                                                                                                                     
 ggtcttatGGAACCGCATGAGCCTGGTGCTGGTCCAGCTTGC‑TGGCGTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTc                                                                                                                                                      <  5:1113613/148‑1 (MQ=25)
 gTTCTTCTTGTACCGCATTAGCCTGTTGCTGTTCGAGCTTGA‑GTGCGTTGGCGCGTGCAATAGCCGCTTCGACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTc                                                                                                                                                      <  8:1236214/150‑1 (MQ=255)
 gTTCTTCTGGTTCCGGATTATCCTGTTGCTGTTCGAGCTTGT‑TTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCg                                                                                                                                                     <  8:867258/151‑1 (MQ=37)
 gTTCTTCTGGTACCGCTTTAGCCTGGTGCTGTTCCAGCTTGC‑GGGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTc                                                                                                                                                      <  4:1288189/150‑1 (MQ=255)
 gTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGC‑GTGCGTTGGCGCGGGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTc                                                                                                                                                      <  5:826455/150‑1 (MQ=255)
   tcgtctGCTCCCGCAGTAGCGTGTTTCTGTTGGAGATTGCGGTGGTCT‑TCGCCTGTAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCgg                                                                                                                                                    <  1:135085/147‑1 (MQ=18)
      tctGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGC‑GTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTCGGCTCggg                                                                                                                                                   <  1:1230645/148‑1 (MQ=255)
      tctGGTACCGCATTAGCCTGTTGCTGGTCGTGCTTGC‑GTGCGTTGGCGCGTGCAATAGCCGCTTCGACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCggg                                                                                                                                                   <  8:517383/148‑1 (MQ=255)
      tctGGTACCGCATTAGCCTGGTGCTGTTCCAGCTTGC‑GGGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCggg                                                                                                                                                   <  3:1364805/148‑1 (MQ=255)
         gggaCCGCATTAGCCTGTTGCTGTTCCAGCTTGC‑GTGCCTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAg                                                                                                                                             <  6:1099390/148‑1 (MQ=255)
         ggTTCCGCATTATCCTGTTGCTGTTCCAGGTTGC‑GTGCTTTTGCGCGGGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAAt                                                                                                                                               <  6:582113/149‑1 (MQ=255)
         ggTACCGCATTAGCCTGTTGCTGTTCCAGCTTGC‑GTGCTTTGGCGCATGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATa                                                                                                                                              <  2:1168718/150‑1 (MQ=255)
          gTACCGCATTAGCCTGTTGCTGGTCCAGCTTGC‑GTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGc                                                                                                                                            <  5:266543/151‑1 (MQ=255)
          gTACCGCATTAGCCTGGTGCTGGTCCAGCTTGC‑GTGCGTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGc                                                                                                                                            <  2:1348649/151‑1 (MQ=255)
            cccGCATTAGCCTGCTGCTGTTCCAGCTTGC‑GTGCTTTGGCGCGTGCAATAGCCGCTTCTACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCgg                                                                                                                                          <  8:1218567/150‑1 (MQ=255)
            acctaaTTAGCCTGCTGCTGTTCGAGCTTTT‑TTGCTTTTGCGCGTGCAATAGCCGCTTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCgg                                                                                                                                          <  6:1245590/146‑1 (MQ=21)
            aCCTCATTAGCCTGTTGCTGTTCCAGCTTGC‑GTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCgg                                                                                                                                          <  8:761899/151‑1 (MQ=255)
               gCATTAGCCTGCTGCTGTTCCCGCTTGC‑GTGCTTTCGCGCGTGCAATAGCCGCTGCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCtt                                                                                                                                       <  8:1245332/151‑1 (MQ=255)
                 aTTAGCCTGTTGCTGTTCCAGCTTGA‑GTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCg                                                                                                                                     <  4:1241105/151‑1 (MQ=255)
                   tAGCCTGTTGCTGTTCCAGCTTGC‑GTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCGACCTGAGCTTCTGGCTCCCCAATAGCCGGTTGATGTTCCAGTTTGCGAGCTTTGTCTAGGGAAATAGCGGCTTCgcg                                                                                                                                   >  7:511167/1‑149 (MQ=14)
                   caGCCTGCTGCTGGTCGAGCTTGC‑GTGCTTGCGCGCGTGCAATAGCCGCTGCGACGGCAGCTTTGCGCGGATCAACCTGTGCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAc                                                                                                                                   <  8:271642/150‑1 (MQ=17)
                     gCCTGTTGCTGTTCCAGCTTGC‑GTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCGACCTGATCTACTCGCACCGCAGTAGCCCGGTGCTGTGACCGGATTCCAGCTGTGGAGCGGGCAAGAGCGGCTTCGAagg                                                                                                                                 >  1:264137/1‑151 (MQ=9)
                     gCCTGTTGCTGTTCCAGCTTGC‑GTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAcgg                                                                                                                                 <  7:85892/151‑1 (MQ=255)
                      ccTGTTGCTGTTCGAGCTTGC‑GTGCTTTTGCGCGTGCAATAGCCGCTTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAcggc                                                                                                                                <  2:282893/151‑1 (MQ=255)
                      ccTGTTGCTGTTCCAGCTTGC‑GTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTGTTCTGGCTCCGGATTAGCCTGTTGCTGTTCCAGTTTGCGCGCTTTGGGGCGGGCGATACCCGCTTCTAccgc                                                                                                                                >  7:1112890/1‑151 (MQ=11)
                      ccTGTTGCTGTTCCAGCTTGC‑GTGCGTTGGCGCGTGCAATAGCCGCTTCGACTGCAGCTTGGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAcggc                                                                                                                                <  1:1072971/151‑1 (MQ=255)
                      ccTGGTGCTGTTCCCGCTTGC‑GTGCGTTGGCGCGTGCAATAGCCGCTGCGACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAcggc                                                                                                                                <  4:522498/151‑1 (MQ=255)
                       cTGTTGCTGTTCCAGCTTGC‑GTGCTTTGGCGCGTGAAATAGCCGCTTCGCCGGCAGCTTTGCGCGGATCAACCTCTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAcggcg                                                                                                                               >  3:485560/1‑151 (MQ=255)
                         gTTGCTGTTCCAGCTTGC‑GTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCGGATATCCGAGGAGCACACGGGTGTTCTCCATACACGTTATGCGGTTGCTGTTGCCGTGTTCGGGGTTTGGAAAGGGCTCTAGCGGGTTcggcggcggg                                                                                                                             >  7:1127320/1‑150 (MQ=9)
                         gTTGCTGTTCCAGCTTGC‑GTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAcggcgg                                                                                                                              <  1:1217453/150‑1 (MQ=255)
                         gTTGCTGGTCCAGCTTTC‑GTGCTTTGGCGCGTGCAATAGCCGCTGCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAcggcgg                                                                                                                              <  8:182076/150‑1 (MQ=255)
                           tGCTGTTCCAGCTTGC‑GTGCTTTGGCGCGTGCAATAGCCGCTTCTACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCt                                                                                                                            <  6:517544/150‑1 (MQ=255)
                            gCTGTTCCCGCTTGC‑GTGCCTTCGCGCGTGCAATAGCCGCGTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCttt                                                                                                                          <  6:224533/151‑1 (MQ=255)
                            gCTGTTCCAGGTTGC‑GGGCGTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCttt                                                                                                                          <  7:306329/151‑1 (MQ=255)
                            gCTGTTCCAGCTTGC‑GTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCttt                                                                                                                          <  1:586641/151‑1 (MQ=255)
                            gCTGTTCCAGCTTGC‑GTGCTTTGGCGCGTGCAATAGCCGCGGCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCtt                                                                                                                           <  2:827798/150‑1 (MQ=255)
                                     gCTTGT‑TTGCTTTGGCGCGTTCAATAGCCGCTTCGACTGCAGCTTTGCGCTGATCAACCTGTTCTTCTGGCTCCGGATTAGCCGGTTGCTGTTCCCGTTTGCGGGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATc                                                                                                                 <  8:1101318/151‑1 (MQ=17)
                                     gCTTGC‑GTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCCACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGGTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGGTTGGGGCggcgg                                                                                                                 >  5:674944/1‑148 (MQ=17)
                                     gCTTGC‑GTGCGTTCGCGCGTGCAATAGCCGCTGCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATc                                                                                                                 <  7:259785/151‑1 (MQ=255)
                                        ttttttGCGTTAGCTCGGGCAATATACGCTTCAACTGCCGATTTGCGGGGATCAAGCTGTTCTTCTGGCTCCGCATTATCCTGTTGCTGTTCCAGGTTTCGGGCTTTTGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCg                                                                                                                <  6:870740/145‑1 (MQ=2)
                                           cgggcgttGGCGCGTGCAATAGCCGCGTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCt                                                                                                            <  1:1173679/145‑1 (MQ=255)
                                           cgggcctgggCGCGGGCAATAGCCGCGGCCACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCt                                                                                                            <  3:1316242/143‑1 (MQ=17)
                                           agggcctttgcgcGGGCAATAGCCGCGTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGAcc                                                                                                             <  4:133254/141‑1 (MQ=14)
                                             ggCTTTTGCGCGGGCAATAGCCGCTGCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCtg                                                                                                           <  2:114035/149‑1 (MQ=14)
                                               gttttGCGCGGGCAATAGACTCTGCTACTGCAGCTGTTCGGGGATCTAAGTGTTCTTCTGGTTCGGGATTAGCCTGGTGCTGTTCGCGTTTTCGGGCTTTTGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCtgttg                                                                                                        <  6:1139107/150‑1 (MQ=2)
                                               gtttGGCGCGGGCAATAGCCGCTTCGACGGCAGCTTTGCGCTGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCtgttg                                                                                                        <  8:1037319/150‑1 (MQ=255)
                                                gttGGCGCGTGCAATAGCCGCTGCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCGCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCtgttgt                                                                                                       <  5:510367/150‑1 (MQ=255)
                                                   ggCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGGTCTTCTGGCTCCGCATTAGCCGGTTGCTGGTCCCGTTTGCGCGCTTGGGCGCGGGCAATAGCGGCTTAGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCt                                                                                                    <  1:1008358/151‑1 (MQ=255)
                                                   ccctctggcacgaGCCCCTTCGCCGGCCGCTTTGCGCGGATCTACCTGTTGTTCTGGTTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGttcttc                                                                                                     <  4:1223997/138‑1 (MQ=11)
                                                       cgTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGGTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCGTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCt                                                                                                <  1:597597/151‑1 (MQ=255)
                                                       cgTGCAATAGCCGCGGCAACTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCt                                                                                                <  1:773228/151‑1 (MQ=14)
                                                        ggggaagaGCCGCTGCTACTGGAGCTTTGCGAGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGCTGCTGTTCCCGTTTGTGCGCTTTCGCTCGGGCAATAGCGGCTTCTACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTc                                                                                               <  6:951939/144‑1 (MQ=14)
                                                         ggCAATAGCCGCGGCGACTGCAGCTTTGCGCTGAGCAACCTGGTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTCGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCg                                                                                              <  1:915058/150‑1 (MQ=14)
                                                         cgctctAGCCGCGGCCACGGCAGCTTTGCTCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTTCTGTTCCAGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCg                                                                                              <  2:692111/146‑1 (MQ=14)
                                                          gCAATAGGCGCTTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCg                                                                                              <  6:401445/150‑1 (MQ=255)
                                                          gCAATAGCCGCGTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCgg                                                                                             <  2:1093579/151‑1 (MQ=255)
                                                          gCAAGAGCCGCTTCAACTGCAGCTTTCCGCTGATCAACCTGGTCTTCTGGCTCCGCATTAGCCTGCTGCTGTTCCCGTTTGCTCGCGTTGGCGCGGGCAATAGCGGCTTCTACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCgg                                                                                             <  6:1432187/151‑1 (MQ=14)
                                                           cAATAGCCGCGTCCACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGc                                                                                            <  4:209672/151‑1 (MQ=255)
                                                             agtgCCGCTCAGACGGGCGCTCTGCGGCTATCAACCTGTTCTTCTGGCACCGCATTAGCCTGTTGCTGTTCCCGGTTGCGGGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCAt                                                                                          <  5:35360/148‑1 (MQ=14)
                                                              tAGCCGCTTCGACGGCAGCTTTGCGAGGATCAACCTGGTGTTCTGGATCCGCATTAGGCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGCCGGCGGCGGTGGGCGGAGCGCCCGGGTGTTGTGGcggggcggg                                                                                         >  3:342965/1‑143 (MQ=14)
                                                               aggcggttCGACGGCAGCTTTGCGCGGATCATCCTGTTTTTCTGGGTCGTGATTATCCTGTTGCTGTTCGCGTTTGCGGGCGTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCAtt                                                                                         <  8:35731/144‑1 (MQ=14)
                                                                 ccGCGTCTACTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGGTCCCGTTTGCGGGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGc                                                                                      <  2:1229439/151‑1 (MQ=14)
                                                                    gttCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTg                                                                                   <  6:177457/150‑1 (MQ=255)
                                                                      gcGACTGCAGCGTTGCGCGGAGCAACCTGGTCTTCTGGCTCCGGTTTAGCCTGGTGCTGTTCCCGTTTGCGGGCGTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGtt                                                                                 <  3:546680/150‑1 (MQ=14)
                                                                       ggtcGGCCGCTTTGGGGTGATCAACCCGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGGTCCCGTTTGGGCGCTTGTGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTg                                                                                <  7:752361/148‑1 (MQ=14)
                                                                         actgCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTGCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTg                                                                                <  8:860419/146‑1 (MQ=255)
                                                                           ggCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGGTTGCGCGCTTTGGCGCGGGcga                                                                                                                                                >  3:31664/1‑81 (MQ=14)
                                                                              cgCTGTGCGCGGAGGAACCTCTTCTTCTGCCTCGTCATAAGCCTGGTGCTGGGCGCGTTTGCTCGCCTTGGCGCGGGCAATAGCCGCGTCGACTGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTcc                                                                         <  7:1464628/150‑1 (MQ=9)
                                                                               gCTTCGAGCGGATCAAGCTCTTCTTCTGCCTCCGCTTTAGCCTGTTGCTGGTCCCGTTTTCGCGCTTGCGCGCGGGCAATAGCGGCTTCTACGGCCGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCa                                                                        <  6:195748/151‑1 (MQ=14)
                                                                                  gtGCGCGGATCATGCTGTTCTTCTGGCTCCGCATTAGCCGGCTGCTGTTCCCGTTTTCTGGCTTTGGCTCGGGCAATAGCGGCTTCCACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCt                                                                     <  7:164348/150‑1 (MQ=17)
                                                                                    gcgcGGATCTACGTGGTCTTCTTGCTCCGCATTAGCCTGCTGCTGTGCCGGTTTGCTGGCGTTCGCGCGGGCAATAGCGGCTTCGACTGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTg                                                                   <  1:775626/151‑1 (MQ=11)
                                                                                    gcgcGGAGCTACCAGGTCTTCTGGCTCCGCATGAGCCTGGTGCTGGTCGGGTTTGCGGGCGTTGGCGCGGGCAATAGCCGCGGCGACTGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTg                                                                   <  3:1382868/151‑1 (MQ=11)
                                                                                      gggtagccaacTGCTCTTCGGGCTCCGCAATACCCGGCTGCTGTTCCGGTTTGCGGGCTTTGGCGCGGGCAATAGCGGCGTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCg                                                                 <  5:67479/141‑1 (MQ=14)
                                                                                      gcgGAGCCACCTGTGCTTCTGGGAGCGCATTAGCCTGGTGCTGTTCGCGTTTTCGGGCGTTCGCGCGGGCAATAGCCGCTTCCACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCg                                                                 <  7:256701/151‑1 (MQ=11)
                                                                                            ccccctcgtcctctGGCTCCGCATTATTCTTTTTATTTTTCCGGTTGCGCGCTTTTGCTAGTGTAATATTCGCTTCGTTTGCCTCTTTGAGGGTATTCAGATGTTCTTCTGGTTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCttt                                                           <  4:413264/140‑1 (MQ=2)
                                                                                            cAACCTGTTCTTCTCGAGTCTCATTATCCGGTTTCCGTTCCCGGTGGCGCGTCTTCGCTCGTGCAATAGCGGCTTCGACGGCTGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCttt                                                           <  6:601960/151‑1 (MQ=14)
                                                                                             aaCCTGTTCTTCTGGCTCCGCAGTAGCCGGTTGCTGTTCCCGTTTGCGAGCTTTGGCTCGGGCAATAGCGGCTTCGACGGAGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGTCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTg                                                          <  4:487392/151‑1 (MQ=255)
                                                                                              accagcagttcgGGCTCCGCATCAGCCTGGTGCTGGTCCCGTTTGCGGGCGTTGGCGCGGGCAATAGCCGCTGCCACGGCGGCTTTGCGCGGATCCACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTgg                                                         <  3:1055260/143‑1 (MQ=14)
                                                                                              aCCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGGTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGTTc                                                                                               >  1:95175/1‑113 (MQ=255)
                                                                                               ccTGTTCTTCTGGTTCCGCATTATCCGGTTGCTGTTGCTGTTCGGTTGGTTGCGCGCGGGCAATAGCGGCGTCTACTGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGc                                                        <  8:307500/151‑1 (MQ=14)
                                                                                                   ttctttTGGCTACGCAGTAGCTGTTTGGTGTTCGGGTTTGTTGGCGTTTGCGCGGGCAATAGCGGCTTCTACTGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACg                                                     <  8:478394/150‑1 (MQ=14)
                                                                                                         gggCTCGGCATGACCCTGGTGCTGGTCCCGTTTGCGGGCGTTCGCTCGGGCAATAGCCGCGTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATa                                              <  5:434326/150‑1 (MQ=14)
                                                                                                           gCTCCGCATTAGCCGGTTGCTGTTCCAGGTTGCGGCCTAAGCCCCGGGCAATAGCGTCGACTCACGCGGGTTGGCGGGGATCGACCTGTTGTTCTGGATCAGCATTAGCCTGTTGCTGTGCCAGCTTGGGTGGGTTgggcgggggtctggg                                            >  7:1287577/1‑138 (MQ=255)
                                                                                                           ccTCCGCATTAGCCGGGTGCTGGTCCGGTTTGCGCGCGTGCGCGCGGGCAATAGCGGCGGCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGc                                            <  5:567676/150‑1 (MQ=14)
                                                                                                              cctctaaaGCCTGATGCTGTTCCGGTGTGCGGGCCTTGGCGCGGGCAATCGCGGCGTCGACTGCGGCTGTGCGCGCATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCgg                                          <  3:121221/143‑1 (MQ=14)
                                                                                                                gCATCACCCGGGTGCTGTTCCCCTTTGCGCGCGTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCtt                                       <  1:1340100/151‑1 (MQ=17)
                                                                                                                     attcGGTTCCTGTTCGCGTTTTTGGGCTTTCGCTCGGGCAATAGCCGCGTCTACTGCCGCTTTGCGCGGATCTACCTGTTCTTCTGGATCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGAc                                   <  4:192034/147‑1 (MQ=14)
                                                                                                                       cctggtGCTGTTCCCGTTTGCGCGCGTGCGCGCGGGCAATAGCGGCGTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGAcggc                                <  7:48578/146‑1 (MQ=14)
                                                                                                                       cccggggctgccgctgTTTGTGGGCCTTCGCGCGGGCAATAGCCGCGTCTACTGCCGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGAcggc                                <  6:764541/136‑1 (MQ=11)
                                                                                                                       ccGGCTGCTGGTCGCGTTTTGTGGCGTGGGCGCGGGCAATAGCCGCGGCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGAcggc                                <  3:1016877/151‑1 (MQ=14)
                                                                                                                          ggtGCTGGTCCCGTTTGCTGGCTTTGGCGCGGGCAATAGCGGCTTCGACTGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACggcggc                             <  3:566765/149‑1 (MQ=14)
                                                                                                                           cccccgctcccgcgggcgcgcTGGGGCGCGTTCTATAGCAGCGTCGACGGCGGCTTCGCGCGGATCTACCTTTACTTCTGGCGAGCCCTTAGCCGTTCGCTGCTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCt                            <  3:835634/136‑1 (MQ=2)
                                                                                                                                gttcgtgTTTTCTCGCCTTTGCGCGGGCTATAGCCGCTGCTACTGCCGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGGTTGCGTGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTg                         <  6:818765/143‑1 (MQ=11)
                                                                                                                                gTTCCCGTTTGCGCGCTTTGGCTCGGGCGATAGct                                                                                                                                           >  1:335919/1‑34 (MQ=255)
                                                                                                                                     gctttGCTCGCGTGGGCGCGGGCAATAGCCGCGTCCACTGCCGCTTTGCGCGGATCGACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGAt                  <  7:409576/149‑1 (MQ=11)
                                                                                                                                      ggttGCGCGCGTTCGCGCGGGCAATAGCCGCGGCGACGGCGGCTTTGCGCGGATCCACCTGTTCTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATc                 <  7:415539/149‑1 (MQ=11)
                                                                                                                                             ttcTTTGTCTCGGGGAAGAGCGTCTTCGACGGAAGCTTTCCGCGTATCTCCCTCCTCGTCGGGCTCCGGATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTg           <  2:264985/148‑1 (MQ=11)
                                                                                                                                               cgttGGCGCGGGCAATAGCCGCTGCCACGGCGGCTGTGCGCGGAGCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGttc        <  7:1027085/149‑1 (MQ=14)
                                                                                                                                                   atcTCGTGCAATAGCCGCTTCAACTGCCGCTTTGCTCGGATCTACCTGTTTTTCTGGCTCGTCATTAGCCTGTTGCTGGTCGAGCTTGCGTGCTTTGGCTCGGGCAATAGCGGCTTCTACGGCGGCTTTGCGCGGATCGACCTGttcttc     <  8:798792/148‑1 (MQ=11)
                                                                                                                                                     cTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCGATAGCTGCTTCGACGGCGGCTTTGCGGGGATCGGCCTGGTGTGCTgg  >  3:231837/1‑151 (MQ=11)
                                                                                                                                                      |                                                                                                                                                     
TGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGC‑GTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTCTTCTGG  >  DH1/2169428‑2169726

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑