Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*DH12,169,5980GT25.6% 307.1 / 30.7 216A654A (GCC→GCA) rsxCelectron transporter RsxC
Reads supporting (aligned to +/- strand):  ref base G (36/124);  new base T (1/54);  total (37/179)
Fisher's exact test for biased strand distribution p-value = 1.31e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 234 total aligned reads displayed.

AGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATT‑AGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGC‑TCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTCTTCTGGTTCCGCATTAGCCTG  >  DH1/2169448‑2169741
                                                                                                                                                       |                                                                                                                                                
atccTGTTGCTGTTCCCGCTTTCGTGCTTTTGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATT‑AGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAcg                                                                                                                                                  <  2:303990/149‑1 (MQ=255)
  ccTGTTGCTGGTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATT‑AGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAcggc                                                                                                                                                <  3:1567031/151‑1 (MQ=255)
  ccTGCTGCTGTTCCAGCTTGCGGGCGTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATT‑AGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAcggc                                                                                                                                                <  6:123651/151‑1 (MQ=255)
     ggtGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATT‑AGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAcggcg                                                                                                                                               <  5:1752028/147‑1 (MQ=255)
     gTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCTACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATT‑AGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAcggcgg                                                                                                                                              <  6:1851173/150‑1 (MQ=255)
       tGCTGTGCGTGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCTACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATT‑AGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCt                                                                                                                                            <  8:1922016/150‑1 (MQ=255)
        gcggctCCCGCTTGCGTGCTTTGGGCCGGGGACTAGCGGCGTCGCCGGGTGGCTTGCGCGGTTCAACCTGTGCTTCTGGCTCCGCATT‑AGCCGGTTGCTGTTCCCGTTTGGGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCttt                                                                                                                                          <  5:1234296/146‑1 (MQ=14)
        gCTGTTCCAGCTTGCGTGCGTGGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATT‑AGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCttt                                                                                                                                          <  1:474259/151‑1 (MQ=255)
         cTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCGACCTGTTGTTCTGGATCCGCATT‑AGATGGGAGGAGTTCACGTGTGAGCTCGATTGCCCTGCCGAAAGCGGGTTCGACGTCGGCTTTg                                                                                                                                         >  1:635563/1‑151 (MQ=2)
           gTTCCAGCTTTCGTGCGTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATT‑AGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTgc                                                                                                                                        <  5:426564/150‑1 (MQ=255)
           gTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGCCGGCGCCTTTTCGAGGATAAAACTGTTATTCTTGATCCGCATT‑AGCCTGTTGCTGTTAAAGTTTGCGAGCTTTGGCTCGGGCAATAGCGGGTTcggcggcgggtggggg                                                                                                                                       >  2:649279/1‑144 (MQ=2)
               cAGCTTGCGTGCGTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATT‑AGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCAGCTTCGACGGCGGCTTTGCGCGGa                                                                                                                                   <  3:2001968/151‑1 (MQ=255)
                ggCTTGCGGGCGTGGGCGCGTGCAATAGCCGCTTCTACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATT‑AGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGAt                                                                                                                                  <  7:881106/150‑1 (MQ=255)
                ccctcccctgcctgcgcgcGGGCAATAGCCGCTGCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATT‑AGCCGGTTGCTGTTCCCGGTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGAt                                                                                                                                  <  3:1527932/136‑1 (MQ=14)
                aGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCCACCTGTTATTATGGCTCCTCATA‑AGACCGTTCATGTTCCCAAATGCGCGATTTCGAAAGGTCAATAGAAGCAACGACGGCGGCTTTGCGCGGAt                                                                                                                                  >  5:644215/1‑151 (MQ=255)
                   ttGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCGGGATTGGGCGGGGCCACGTGTTCTGGGGGGT‑CACATTGAGCCGGTTGGTGTTCCCGCTTGCGCGGTTTGGAAAGGGCAATTGGGGCTTGGGcgggggggggggggggggggg                                                                                                                               >  1:513007/1‑136 (MQ=255)
                     gCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCTACCTGTTCTTCTGGCTCAGCATT‑AGCCGGTTGCTGTTCCAGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGGGTTGCGCGGagggcgg                                                                                                                             >  7:306789/1‑145 (MQ=14)
                      ggtgcatgcgcgcGTGCAATAGCCGCTTCTACTGCAGCTTTGCGCGGATGAACCTGTTCTTCTGGCTCCGCATT‑AGCCTGTTGCTGTTCCCGTTTGCGCGCTTTTGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCt                                                                                                                            <  2:1473176/142‑1 (MQ=17)
                      cGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATT‑AGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCt                                                                                                                            >  8:115628/1‑151 (MQ=255)
                        ggcgtttgcgcGGGCAATAGCCGCTGCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATT‑AGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCtg                                                                                                                           <  6:1053085/143‑1 (MQ=14)
                        ggcgtgtgcgatttcAATAGCCGCGGCCACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATT‑AGCCGGTTGCTGTTCCCGTTTGCGGGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCtgt                                                                                                                          <  4:1076889/137‑1 (MQ=14)
                         gcgtgggCGCGGGCAATAGCCGCTGCCACTGCAGCTTTGCGCGTATCAACCTGTTCTTCTGGCTCCGCATT‑AGCCTTGTGCTGTTCCCGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCTACGGCGGCTTTGCGCGGATCGACCtgtt                                                                                                                         <  8:512876/146‑1 (MQ=14)
                         ccgctcgcccgcgccaTAGCCGCTTCGACGGCTTTTTTTTTATGTTCAAGCTGTTCTGCTTGATCTCCATT‑AGGCTTTTGCTGTTTTCGCTTGAGGTCGCTGTTACGTGCTATAGCGGCTTCGACGGCTGCTTTGCGCGGATCGACCtgtt                                                                                                                         <  6:1613449/136‑1 (MQ=2)
                          cTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATT‑AGCCTGTTGCTGTTCCAGATTGCGAGCTTTGGCTCGGGCAATAGAGCCTTCAACGGCGGCTTTGAGCGGATCGAGCtgatg                                                                                                                        >  8:333886/1‑151 (MQ=14)
                            tttgcgcGTGCAATAGCCGCTGCTAAGCCATCTTTGCGGGGATCAAGCTGTTCTTCTGGCTCCGCTTT‑AGCCTGTTGCTGTTCGGGTTTTCTCGCTTTGGCTCGGGCAATAGCGGCTTCGACTGCGGCTTTGCGCGGATCGACCtgttgt                                                                                                                       <  4:2014236/147‑1 (MQ=14)
                             tGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGAAAAAACATGATCTTCTTGATCCGAATT‑AGACTGTAGCTTTTACAATATGACCGATTTCGCACGATCAATAAAAAATTCGACGGCGGCTTTGCGCgggtggcgatgtggttg                                                                                                                     >  4:1295754/1‑136 (MQ=2)
                              tgcgcGTGCAATAGCCGCTGCTACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATT‑AGCCTTTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTc                                                                                                                     <  6:447966/149‑1 (MQ=255)
                              ggcccctccAATAGCCGCGGCCACTGCAGCTTTGCTATGATCACCCTGTTCTTCTGGGTCCGCATT‑AGCCTGTTGCTGTTCCCGTTTTCGAGCGTTGGCGGTGGTAATAGCGGCTTCTACTGCGGCTTTGCGCGGATCGACCTGTTGTTCt                                                                                                                    <  8:1230611/143‑1 (MQ=9)
                              cgcgcGGGCAATAGCCGCTGCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATT‑AGCCTGGTGCTGTTCCCGTTTGCGGGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCt                                                                                                                    <  3:94980/150‑1 (MQ=14)
                                  cgTGCAATAGCCGCTTCTACGGCAGCTTTGCGCTGATCAACCTGTTCTTCTGGCTCCGCATT‑AGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGC‑t                                                                                                               <  7:1771634/151‑1 (MQ=255)
                                   gggCAATAGCCGCTTATACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATT‑AGCCTTTTGCTGTTCCCGTTTGCGCGCTTTTGCGCGGGCAATAGCGGCTTCGACTGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGC‑Tc                                                                                                              <  4:445576/149‑1 (MQ=14)
                                   gTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATT‑AGCCGGTTGCTGTTCCCGATTGCGCGCTTTGGCTCGGTAAATAGAGGATTAGACGGAGGCTTTGATCGGATCGACCTGTTGTTCTGGA‑Tc                                                                                                              >  4:685260/1‑151 (MQ=14)
                                    tGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCCACCTGTTCTTCTGGCTCCGCATT‑AGCCTGTTGCTGTTCCAGATTGCGCGCTTTGGCGCGGGCGATAGCTGCTTCCACGGCAGGTTTCCGGGGATCGCCCtgggcggggggatgc                                                                                                              >  1:1939688/1‑138 (MQ=11)
                                     gCAATAGCCGCTTCTACTGCCGCTTTGCGCGTAGCTACCTGTTCTTCTGGCTCCGCATT‑AGCCTGTTGCTGTTCGCGTTTGCGCGCTTTTGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGC‑TCg                                                                                                             <  5:2006473/150‑1 (MQ=14)
                                     gCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCGACCTGTTGTTCTAGATCGGAATA‑ACGACGTTGATGGTCACCTTTGGTAGCTTTGTCTAGGGCAATAGCGGCTGCGACTGAGGATAAGAAAGGATCGGCCTGTTGGTGTGGC‑TCgg                                                                                                            >  2:1631518/1‑151 (MQ=2)
                                       aaTAGCCGCTTCTACTGCAGATTTGCGCGGATCAACCTGTTCTTCTGGGTCCGCATT‑AGCCTGTTGCTGTTCCCGTTTGCGGGCTTTTGCGCGGGCAATAGCGGCTTCTACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGC‑TCGGCa                                                                                                          <  2:185348/151‑1 (MQ=14)
                                        aTAGCCGCTGCGACTGCCGCTTTGCGCGGATGAACCTGTTCTTCTGGCTCCGCATT‑AGCCTGTTGCTGTTCCGGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGC‑TCGGCAt                                                                                                         <  2:119037/151‑1 (MQ=14)
                                          aGCCGCTGCAACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATT‑AGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGC‑TCGGCATTa                                                                                                       <  3:14698/151‑1 (MQ=255)
                                            ccGCGTCGACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATT‑AGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGC‑TCGGCATTAGc                                                                                                     <  3:436429/151‑1 (MQ=255)
                                                 tctactgcctcTTTGCTCGGATGAAGCTGTTCTTCTGTCTCCGCATT‑AGCCTGTTGCTGTTCCGGTTTGCGGGCTTTTGCGCGGGCAATAGCGGCTTCTACTGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGC‑TCGGCATTAGCCt                                                                                                   <  6:1829291/138‑1 (MQ=14)
                                                  gtacgtctgCTTTGCTCTTATCTACATGTTCTTATTGCTCGGTTTT‑AGCCTGTTGCTGTTCGCGTTTGTTGGCTTTTGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGC‑TCGGCATTAGCCTGTTg                                                                                               <  4:485829/143‑1 (MQ=14)
                                                    acttcAGCTTTGCGCGGATCAACCTGTTCTTCTGGTTCCGCATT‑ATCCGGTTGATGTTCCTGTTTGCTTGTTTTCGCTCGGGCAATAGCGGCTTCTACTGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGC‑TCGGCATTAGCCTGTTGCt                                                                                             <  4:981579/147‑1 (MQ=14)
                                                    actggaGCTTTGCGCTGAGCAACCTGTTCTTCTGGCTCCGCATT‑AGCCTGGTGCTGGTCCCGTTTGCGGGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGC‑TCGGCATTAGCCTGTTg                                                                                               <  4:1640988/144‑1 (MQ=14)
                                                    actgCAGCTTTTCGCTGATCCACCTGTTCTTCTGGCTCCGCATT‑AGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGC‑TCGGCATTAGCCTGTTg                                                                                               <  4:641518/146‑1 (MQ=255)
                                                    aCGGCCGCGTTCCTCGGATCAACATGTTCTTCTTGTTCCGCAAT‑AGCCCGTTGTTGCTCCCTTTTGATCGCTTTCGCGCGGGCAATAGCGGCTTCCACTGCGGCTTTGCGCGGATCCACCTGTTGTTCTGGC‑TCGGCATTAGCCTGTTGCt                                                                                             <  8:1442721/151‑1 (MQ=255)
                                                          gCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATT‑AGCCGGTTGCTGTTCCCGATTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCAGCTTTCCGAGGATCCACCACTTGTTCTGCG‑TCCGAATTAGCCTgaagatcttcc                                                                                        >  8:449186/1‑140 (MQ=14)
                                                          gCTTTGCGCGGATCAACCTCTTCTTCTGGCTCCGCATT‑AGCCGGTTGCTGGTCCAGTTTGCGCGCTTTTGCGCGGGCAATAGCCGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGC‑TCGGCATTAGCCTGTTGCTGTTCCa                                                                                       <  3:1958303/151‑1 (MQ=14)
                                                          gCTGTGCGCGGTTCCACGTGCTCTTCTGCCTCCGCATC‑ACCCTGGTGCTGTGCGCCTTTGCTCGCGTTGGCGCGGGCAATAGCCGCTGCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGC‑GCGGCATTAGCCTGTTGCTGTTCCa                                                                                       <  7:1989822/151‑1 (MQ=14)
                                                             tttcgcgGAGCAACCTGTTCTTCTGGCTCCGCATG‑AGCCGGCTGCTGTTCCCGTTTGCGGGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGC‑TCGGCATTAGCCTGTTGCTGTTCCAGc                                                                                     <  1:404295/147‑1 (MQ=255)
                                                             tttcgagtaTCTACCTGGTCTTCTGGCTCCGGATT‑AGCCTGGTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACTGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGC‑TCGGCATTAGCCTGTTGCTGTTCCAg                                                                                      <  3:57674/141‑1 (MQ=14)
                                                             ttGCGCTGATCTACGAGTTCTTATGGCTCGGCATT‑ATCCTGTTGCTGTTCGGGTTTGTGGGCTTTGGCGCGGGCAATAGCGGCTTCTACTGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGC‑TCGGCATTAGCCTGTTGCTGTTCCAg                                                                                      <  8:1537430/149‑1 (MQ=11)
                                                               gggcgTATCAACCTGTTCTTCTGGCTCGTCATC‑AGCCTGGTGCTGTTCGGGTTTTTTGGCTTTTGCGCGGGCAATAGCCGCTTCTACTGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGC‑TCGGCATTAGCCTGTTGCTGTTCCAGCtt                                                                                   <  7:594598/148‑1 (MQ=14)
                                                               gcgcGGATCCACCTGTTGTTCTGGATCTTTTTT‑ATCCTGGTGCTGGTCGGGTTTTTGGGCTTTTGCGCGGGCAATAGCGGCTGCTACGGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGC‑TCGGCATTAGCCTGTTGCTGTTCCAGCtt                                                                                   <  4:355965/150‑1 (MQ=2)
                                                                gtcgGATCATTCTGTTCTTCTGGCTCTGCATT‑AGTCTGTTGCTGGTCGGGTTTGGGGGCGTTGGCGCGGGCAATAGCGGCGTCTACGGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGC‑TCGGCATTAGCCTGTTGCTGTTCCAGCTTGc                                                                                 <  8:297053/149‑1 (MQ=14)
                                                                 ggggaggtaCCTGTTCTTCGGGCTCGTCTTT‑AGCCGTGTGCTGGGCGCGTTTGCGGGCGTGTGCGCGGGCAATAGCGGCTTCTACTGCCGCTTTGCGCGGATCTACCTGTTGTTCTGGC‑TCGGCATTAGCCTGTTGCTGTTCCAGCTTGCg                                                                                <  4:1581043/143‑1 (MQ=9)
                                                                 cgattgtcaCCTGCACTTCTGCCTCCGGTTT‑ACCCTTGTGCTGGTCGCGTTTGGGGGCCTGCGCGCGGGCAATAGCCGCTGCTACTGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGC‑TCGGCATTAGCCTGTTGCTGTTCCAGCTTGCg                                                                                <  3:1087119/143‑1 (MQ=2)
                                                                   ggATCAACCTGTTCTTCTGGCTCCGCATT‑AGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACATGTTGTTCTGGG‑TCGGCATTAGCCTGTTGCTGTTGCGGCGTGCggg                                                                              >  3:322290/1‑149 (MQ=14)
                                                                      tCAACCTGTTCTTCTGGCTCCGCATT‑AGCCGGTTGCTGTTCCCGATTGCGCGCTTTGGCTCGGGCAATAGCTGCTTCAACGGCAGATTTACGAGGATCAACAACTTGTTCTGCG‑TCGTAATTATCCTGAAGATCTTCCAGAttcccacatt                                                                           >  8:583489/1‑143 (MQ=255)
                                                                      gctaCCTGGTCTTCTGGCTCGGCATT‑ACCCGTCTGCTGTGCGGGTTTGCTCGCCTGCGCGCGGGCAATAGCGGCGTCTACGGCCGCTTTGCGCGGATCTACCTGTTGTTCTGGC‑TCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCtt                                                                           <  8:1406522/148‑1 (MQ=14)
                                                                       cAACCTGTTCTTCTGGCTCCGCATC‑AGCCTGTTGCTGTTCGCGTTTGAGCGCGTTCGCTCGGGCAATAGCGGCTGCTACGGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGC‑TCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCttt                                                                          <  5:11616/151‑1 (MQ=14)
                                                                          ccTGTTCTTCTGGATCCGAATT‑ATCCTGTTGCTGTTCCAGCTTGAGCGCTTTGGCTCGTGCAATAGCGGCTTCTACTGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGC‑TCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGc                                                                       <  2:1384586/151‑1 (MQ=11)
                                                                                  tctGGCTCCGCATT‑AGCCGGTTGCTGGTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGC‑TCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCa                                                                <  7:1453948/150‑1 (MQ=255)
                                                                                       cTCCGCATT‑AGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCAACGGCGGCTTTGCCCCCCTCGTCCTGTGCTTCACCA‑TCCGCATTAGCCTGTTGCGGTTCCAGCTTGCTAGATTTGGcggggggggtgggg                                                          >  5:1683745/1‑138 (MQ=255)
                                                                                        tacGCATG‑AGCAGGTGGCGGTTCCAGATTGCGGGCTGTGCCTGGCGCTATAGCGGCTTCGCCTGCGTCTTTGCGCGGATCTACCTGTTGTTCTGGC‑TCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCg                                                          <  1:1461487/148‑1 (MQ=14)
                                                                                         ccGCATT‑AGCCGGTTGCTGTTCCCGTTTGCGGGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGC‑TCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCg                                                          <  8:461414/149‑1 (MQ=255)
                                                                                         ccGCATT‑AGCCGGCTGCTGTGCCCGGTTGCGCGCCTGGGCGCGGGCAATAGCGGCTTCGACTGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGC‑TCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGc                                                        <  7:1638155/151‑1 (MQ=14)
                                                                                          cGCATC‑AGCCTGGTGCTGGGCCCGTTTGCGCGCGTGCGCGCGGGCAATAGCCGCTGCTACGGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGC‑TCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCt                                                       <  1:1135113/151‑1 (MQ=14)
                                                                                           gCATG‑ATCCGGGTGCTGTTCCCGGTTTCGGGCGTTGGCGCGGGCAATAGCCGCGTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGC‑TCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCtt                                                      <  7:1230921/151‑1 (MQ=14)
                                                                                            gccatcgcggggtGCTGTTCCCTCTTGTTCGCTTGTGCGCGGGCAATAGCGGCTTCTACTGCCGCTTTGCGCGGATCTACCTGTTGTTCTGGC‑TCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCtt                                                      <  8:1301079/139‑1 (MQ=14)
                                                                                            cATT‑AGCCTTTTGCTGGTCGGGTTTTTGGGCTTTTGCGCGGGCAATAGCGGCTTCTACTGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGC‑TCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTc                                                     <  8:764358/151‑1 (MQ=14)
                                                                                             aTT‑AGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGG‑TCGGGATTATGCTGTTGGTGTTCCAGCTTGCGTGGGTTTGCCCGGTCAATAGCttcttct                                                    >  7:400922/1‑150 (MQ=14)
                                                                                             aTT‑AGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGA‑TCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGAGGCTTCg                                                    >  8:468987/1‑151 (MQ=255)
                                                                                               t‑AGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTGTGCGCAAATCGAGCTTGTATTCTAGC‑TCGGAATTAGAATGTTTATGTTACAGCTTGCGGGCTTTGGAAAGAGCAATAGAGGCTTCGAc                                                  >  2:691996/1‑151 (MQ=14)
                                                                                                gagccttgtGCTGGTCCGGTTTGCGGGCGTGGGCGCGGGCAATAGCGGCGGCGACGGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGC‑TCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGa                                                   <  5:1623615/142‑1 (MQ=14)
                                                                                                caGCCGGGTGCTGTTCCGGTCTGGTCGCGTGGGCGCGGGCAATAGCGGCGTCGACGGCCGCTTTGCGCGGATCTACCTGTTCTTCTGGC‑TCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGAc                                                  <  1:1322950/150‑1 (MQ=14)
                                                                                                 acccGGGTGCTGGGCGCGTTTGCGCGCGTGCGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGC‑TCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGAcg                                                 <  7:1096263/149‑1 (MQ=14)
                                                                                                 aGCCTGCTGCTGTTCGGGTTTGCTGGCGTGGGCGCGGGCAATAGCGGCGGCGACTGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGC‑TCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGAcg                                                 <  7:1734653/151‑1 (MQ=14)
                                                                                                 aGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAGAACCGGATACGACGGCGGGTTTCGGCGGAAAGAGATGTAGTTCTGGG‑TAGGCCTTAGCCTGTTGCTGTTAAAGCTTGCGGGCTTTGGCGCGGGCagggggggcgtggccg                                                 >  7:628744/1‑136 (MQ=255)
                                                                                                 aGCCGGGTGCGGGGCCCGTTTGGGCGCGTGCGCGCGGGCAATAGCCGCGTCGACTGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGC‑TCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGAc                                                  <  3:1313878/150‑1 (MQ=14)
                                                                                                   cgtgTTGCTGTGGCCCGTTGCGGGCGTGGGCGCGGGCAATAGCCGCTTCTACGGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGC‑TCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGAcggc                                               <  1:1831572/148‑1 (MQ=14)
                                                                                                     ggTTGCTGTTCCTGTTTGCGATATTTTGATCTGGCTATAGCTGCTTCGAGGGCTTCTTTGCGCGGATCTACCTGTTGTTCTGGC‑TCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCTCGGGCAATAGCGGCTTCGAcggcgg                                             <  8:1097062/151‑1 (MQ=14)
                                                                                                       gtGCTGGTCCCGTTTGCGCGCGTTGGCGCGGGCAATAGCGGCTGCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGC‑TCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGTAATAGCGGCTTCGACGGCGGCt                                           <  7:1136822/150‑1 (MQ=255)
                                                                                                         gctgggcgggTTTGCGGGCGTGGGCGCGGGCAATAGCCGCTTCCACGGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGC‑TCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCttt                                         <  5:1475124/142‑1 (MQ=14)
                                                                                                         gCTGTTCCGGTTTGAGAGCGTTCGCTCGGTCAATAGGGTCGTCCACGGCGGCTTTGCGCTGAGCTACCTTTTGTTCTGGA‑TCGGAATTAGCCTGTTGCTCTTCCAGCTTGCGTGCTTTTGAACGGTCAATAGCGGCTTCGACGGCGGCttt                                         <  7:1527454/151‑1 (MQ=9)
                                                                                                         gCTGTTCCCGTTTGCGCGCGTTGGCGCGGGCAATAGCGGCTTCTACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGC‑TCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCttt                                         <  5:587578/151‑1 (MQ=255)
                                                                                                                  cgttGCGCGCCTGCGCTCGGGCAATAGCGGCGTCGACGGCCGCGTTGCGCGGATCCACCTGTTGTTCTGGC‑TCCGCATTAGCCTGCTGCTGTTCCAGCTTGCGTGCTTTGGCCCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATc                                <  1:244172/149‑1 (MQ=14)
                                                                                                                    ttGCGCGCTTTGGCTCGGGCAATAGCTGCTTCGACGGCAGGATGGCAAGGAGAGACGTCTTCTT‑TGCCGTCACAATAAGAATGGTGCTGTTCCAGCTTGAGCGGTATTGAAAGCGCTATAGCGGCTTCGAcggcggggtgggcgggggcgg                              >  5:1895283/1‑136 (MQ=255)
                                                                                                                     ttctggccttcgcgcGGGCAATAGCGGCGTCTACGGCCGCTTTGCGCGGATCGACCTGTTCTTCTGGC‑TCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGa                              <  6:1139934/136‑1 (MQ=11)
                                                                                                                         ggcttgcgcgcGGGCTATAGCCGCTTCTACTGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGC‑TCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCTCGGGCAATAGCGGCTTCTACGGCGGCTTTGCGCGGATCGACCTGt                         <  2:54291/141‑1 (MQ=14)
                                                                                                                         ggccttGGCGCGGGCAATAGCCGCGGCCACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGC‑TCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGAcc                            <  1:868538/144‑1 (MQ=14)
                                                                                                                           cTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGGTTTGCGCGGATCGCCCTGTTGTTCTGCG‑TCGGGATTAGCCTGTTGGTGTTCCAGCTTGCGTGCTTTGGCCCGGTTAATCGCTTCTTCGCCGGCACTTTTTCGAGGATCATCCTggcg                       >  3:1236425/1‑148 (MQ=2)
                                                                                                                                gggcGGGCAATAGCGGCGGCCAGTGGGTCTTTGGGCGGTTGGACCTGGTGTTCTGGC‑TGGGGTTTAGCCTGTTGCTGTTCCAGGTTGTGTGCTTGTGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTCTTCTg                  <  2:1992315/148‑1 (MQ=9)
                                                                                                                                gcgctggCAATAGCCGCTTCCACTGCCGCTTTGCGCGGATCTATCTGTTGTTCTGGC‑TCGGCTTTATCCTGTTGCTGTTCGTGTTTTTGTGCTTTTGCTCGGGCAATAGCGGCTTCTACGGCGGCTTTGCGCGGATCGACCTGTtcttct                   <  2:180000/145‑1 (MQ=11)
                                                                                                                                gCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATAGAGCTGATGATCTTCG‑TCGTCATTAACATGTTGATGTTAAATCTTGCTAGCTTTGGAAGGCGGATTATATGAATAGACGGCGGCTTTGGGCGGATGGagcgggtgggcgg                  >  8:1812600/1‑139 (MQ=2)
                                                                                                                                     ggCAATAGCCGCGTCAACTGCGGCTTTGCGCGGATAGACCTGTTGTTCTGGC‑TCGGCATTAGCCTGTTGCTGTGCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTCTTCTGGTTcc             <  5:49797/151‑1 (MQ=14)
                                                                                                                                      gCAATCGCGGGTTCAGCGGCGGCTTTGCGCGCAGCGACCTGTTGTTCGGGC‑TCGGCTTTAGCCTGGTGCTGTGCCAGCTTGCGTGCGTTGGCTCGGGCAATAGCGGCGTCGACTGCGGCTTTGCGCGGATCGACCTGTTCTTCTGGTTCCg            <  5:442341/151‑1 (MQ=14)
                                                                                                                                       cAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGG‑TCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGGGCTTTGGCACGGGCGATAGCGGCTTCCACGGCGGATTTTCGTGGATCGGCATCTGGTTCTGGGTcctt           >  3:245402/1‑149 (MQ=11)
                                                                                                                                            tcgtattCGAATGCGGCTTTGCGCTGATCTACCTTTTGTTCATGA‑TCCTTATTATCCTGTTGGTTGTTCAGATCTTTTGCTTTCGCGCGGGCAATAGCCGCTTCTACTGCCGCTTTGCGCGGATCGACCTGTTCTTCTGGTTCCGCATTa       <  6:1390794/145‑1 (MQ=255)
                                                                                                                                            gCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGG‑TCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCTATAGCGGCTTCCACGGCGGGTTGGGGCGGGGCGACGTGtgctgggccgtccccttc        >  1:1860251/1‑135 (MQ=11)
                                                                                                                                             cGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGC‑TCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCCCGGGCAATAGCTGCTTCGACGGCTGGTTTTCGAGGATCGCCCTGTTGTGCTGCGTCCggagttgg     >  1:382916/1‑144 (MQ=11)
                                                                                                                                                       |                                                                                                                                                
AGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATT‑AGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGC‑TCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTCTTCTGGTTCCGCATTAGCCTG  >  DH1/2169448‑2169741

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑