Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*DH1102,7310AC25.4% 507.8 / 53.2 268intergenic (‑183/+15)trmL/lldDtRNA (cytosine(34)‑2'‑O)‑methyltransferase TrmL/alpha‑hydroxy‑acid oxidizing enzyme
Reads supporting (aligned to +/- strand):  ref base A (145/43);  new base C (2/62);  total (148/120)
Fisher's exact test for biased strand distribution p-value = 1.03e-27
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 271 total aligned reads displayed.

AAAATTGGTGAGCAGTGCGGCCTTTTCCCCTCACCCCGGCCCTCTCCCCGGAGGGGCGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTT  >  DH1/102581‑102880
                                                                                                                                                      |                                                                                                                                                      
           gCAGTGCGGTCTTTTCCCCTCACCCCGGCCCTCTCCCCGGAGGGGCGAGGGAGAAAAAAAGAGTGCGGGGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGG‑CGCaaa                                                                                                                                            <  6:732675/151‑1 (MQ=255)
                      ttttCCCCTCACCCCGGCCCTCTCCCCGGAGGGGCGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGG‑CGCACGCGACTCTGCCg                                                                                                                                 >  1:1576235/1‑151 (MQ=255)
                      ttttCCCCTCACCCCGGCCCTCTCCCCGGAGGGGCGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGG‑CGCAAACGACTATGCCg                                                                                                                                 >  5:1658438/1‑151 (MQ=255)
                      ttttCCCCTCACCCCGGCCCTCTCCCCGGAGGGGCGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGG‑CGCAAACGACTATGCCg                                                                                                                                 >  2:1085434/1‑151 (MQ=255)
                       tttCCCCTCACCCCGGCCCTCTCCCCGGAGGGGCGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGAGAGGGAGTACATAACGAGAGGAACGGTCCCCTCTACCTGAGGGAGAGGGTTAGGGTGAGGGGG‑CGGAAACGAGTATGCCGc                                                                                                                                >  4:1001779/1‑151 (MQ=255)
                        ttCCCCTACCCCGGGCCGTCTCCCGGGTGGGGGGTGGTATAAAAAATTTGTGGGGTGTGGTTTCAGATTTTGGTAGTACATACTGGGCGGAAGGGTCCCCTGTCCTTGAGGGTTTGGGTTAGGGTGTGGGGG‑CGCAAACGACTATGCCGc                                                                                                                                <  4:667569/150‑1 (MQ=255)
                        tgccccTCACCCCGGCCCTCTCCCGGGTGGGGCGTGGGAGAAAAAAAGAGTGCGGTGTGGTTTCAGAGTTAGGTCTTACATACAGCGCCGAACGGTCCCGTCTCCCTGAGGTAGTGGTTTAGGGTGCGGGGG‑CGCAAACGACTATGCCGc                                                                                                                                <  1:401865/148‑1 (MQ=255)
                            ccTCACCCCGGCCCTCTCCCCGGAGGGGCGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGCACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGG‑CGCCAACGCCGATGCCGCCTTcc                                                                                                                           >  7:1568439/1‑151 (MQ=255)
                                cccccGGCCCTCTCCCCGGAGGGGCGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCCCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGG‑CGCAAACGACTATGCCGCATTCCCttt                                                                                                                       <  3:939589/150‑1 (MQ=255)
                                aCCCCGGCCCTCTCCGCGTTGGGGCGTGGTATAAAAAAAGAGTGCGGTCTCTTTTAAGAGTTAGGCAGAACATACAGCGCCCAACGGTCCCCTCTCCCTGAGGGAGAGGTTTTGGGTCCGGGGG‑CGCAAACGACTATGCCGCATTCCCttt                                                                                                                       <  6:547485/151‑1 (MQ=255)
                                 ccccGGCCCTCTCCCGGGCGGGGCGAGGGATAAAAAAAGAGTGGGGTGTCGTTTCTGAGTGCGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGCGGGAGAGGGTTAGGGTGCGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTc                                                                                                                      <  4:1533171/151‑1 (MQ=255)
                                 ccccGGCCCTCTCCCCGGAGGGGCGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTc                                                                                                                      >  8:839107/1‑151 (MQ=255)
                                 ccccGCCCCCCCCCCCGGTGGGGCGCGGCATAAAAACAGAGGGCGGGGGCGTTCCAGAGGGCGGGAGTACAAACCCCGCCCAACGGGCCCCGCACCCTGCGGGAGTGGGTTAGGGTCCGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTc                                                                                                                      <  1:488774/151‑1 (MQ=255)
                                    cGGCCCTCTCCCCGGAGGGGCGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGcc                                                                                                                   >  2:1340180/1‑151 (MQ=255)
                                      gCCCTCTCCCCGGAGGGGCGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGG‑CGCACACGACTATGCCGCATTCCCTTTCGCCAt                                                                                                                 >  8:556985/1‑151 (MQ=255)
                                      gCCCTCTCCCCGGAGGGGCGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGG‑CGCAAACGCCTATGCCGCCTTCCCTTTCGCCAt                                                                                                                 >  1:545552/1‑151 (MQ=255)
                                           ccccccGGGGGGGGGGGGGACAAAAACCTCGGGCGGGGTCTGTTCCGCGTGCGGCAGAACATACCGCCCCCACGGGCCCCCTGGCCGTGCGGGAGCGGGTTTGGGGGCGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAg                                                                                                            <  2:370372/149‑1 (MQ=255)
                                             ccccGGAGGGGCGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGcc                                                                                                          >  1:1347706/1‑151 (MQ=255)
                                                 gggggggggAGGGATAAAAAACGAGTGCGGGGGGGTTCAAGTGGGGGGGTGAACAACCCGCGCCCACCGGGCCCCTCTCCCTGCGGGATTGGTTTCGGGGGCGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTg                                                                                                      <  3:315821/148‑1 (MQ=255)
                                                 ggcggggCGTGGGACAAAAAACGCGGGGGGGGTCTTTTCCGTGGGTGGCATTACATACAGCGCCCACGGGCCCCCTCTCCGTGTGGGATTGGTTTTGGGTGCGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTg                                                                                                      <  4:419870/148‑1 (MQ=255)
                                                 ggAGGGGCGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTg                                                                                                      >  3:418818/1‑151 (MQ=255)
                                                     gggCGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGc                                                                                                  >  2:448080/1‑151 (MQ=255)
                                                       gCGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGc                                                                                                  >  5:285860/1‑149 (MQ=255)
                                                       gCGAGGGAGAAAAAAAGAGTCCGCAGTCGATTCAGAGTCAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCAGAGGGAGAGGGTTAGCGTCACGGGG‑CGCAACCGACTATGCCGCATTCCCATTCGCCATGGGAGCCAGAGCCGc                                                                                                  >  2:577784/1‑149 (MQ=255)
                                                        cGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAgg                                                                                               >  4:1265298/1‑151 (MQ=255)
                                                        cGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAgg                                                                                               >  7:1264929/1‑151 (MQ=255)
                                                         gtggtaaaaaaaacGCGGGGGGTGGGGTTTCAGTGGGGGGGAGAACATACCGCCCCCACGGGGCCCCTCCCCGTGGGGTTGTGGTTTGGGGTGCGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGc                                                                                              <  1:1113826/144‑1 (MQ=255)
                                                            ggAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAAc                                                                                           >  6:366175/1‑151 (MQ=255)
                                                              agaAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAActc                                                                                         >  8:943105/1‑151 (MQ=255)
                                                              acaaaaaacGGGGGGGGTGTGGTTGCAGTGTGCGGGAGAACATACCGCCCCCACGGGCCCCCGCGCCCTGCGGCTGTGGGTTTGGGGGCGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAActc                                                                                         <  5:1257540/149‑1 (MQ=255)
                                                                   aaaaGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGAGCCGAACGGTCCCCTCTACCTGAGGGAGAGGGTTATGGTGAGGGGG‑CGCAAACGACTATGCAGCATTCCCTGTCGCCATGGGAGCCAGTGCCGCAGGGAACTCTTTAc                                                                                    >  2:1605928/1‑151 (MQ=255)
                                                                    aaaGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTAcc                                                                                   >  5:227368/1‑151 (MQ=255)
                                                                    aaaGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTAcc                                                                                   >  4:989902/1‑151 (MQ=255)
                                                                     aaGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTAccc                                                                                  >  5:644031/1‑151 (MQ=255)
                                                                          tGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGccc                                                                             >  7:131660/1‑151 (MQ=255)
                                                                           gCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGcccc                                                                            >  4:709485/1‑151 (MQ=255)
                                                                               tgtCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGc                                                                         >  5:540700/1‑150 (MQ=255)
                                                                                  cGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCAcc                                                                      >  3:678670/1‑150 (MQ=255)
                                                                                  cGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCAcc                                                                      >  8:179708/1‑150 (MQ=255)
                                                                                   gTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCac                                                                    >  2:482314/1‑150 (MQ=255)
                                                                                      tCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCg                                                                  >  8:1513388/1‑150 (MQ=255)
                                                                                       cAGCGTGAGGGAGAACATCCCGCCCCGAACGGCCCCCTCTCCCTTTGGGTGTGGGTTTGGGGGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGa                                                                 <  4:857714/150‑1 (MQ=255)
                                                                                         gtgtggggtattacataccGCGCCGACCGGCCCCCGCGCCGTGTGGGAGTGGTTTCGGGGGCGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATc                                                              <  1:351116/140‑1 (MQ=255)
                                                                                         gagTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGGCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATc                                                              >  4:376969/1‑151 (MQ=255)
                                                                                         gagTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTA‑CCAGCCCCTGCACCAGCGAATCt                                                             >  7:585501/1‑151 (MQ=255)
                                                                                          cgTGCGGGAGTACCTACCGCGCCGACGGGGCCCCTCTCCCTGAGGGAGAGGGTTCGGGTGCGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCt                                                             <  4:919042/150‑1 (MQ=255)
                                                                                          agTGGGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGCGGGAGAGGGTTAGGGGGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCt                                                             <  3:365045/151‑1 (MQ=255)
                                                                                            tGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTGTCCCCAGCCCCTGCACCAGCGAATCTTg                                                           >  2:220830/1‑151 (MQ=255)
                                                                                                ggAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGG‑CGCAAACGCCTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGt                                                        >  6:1292656/1‑150 (MQ=255)
                                                                                                  ggaacatccaGCGCCGAACGGTCCCCGCGCCCTGAGGGCGTGGTTTCGGGGGCGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAAt                                                     <  1:81768/148‑1 (MQ=255)
                                                                                                   gTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAAtt                                                    >  6:136070/1‑151 (MQ=255)
                                                                                                    tacatacaGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAAttt                                                   >  7:463117/1‑151 (MQ=255)
                                                                                                     acatacaGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCCCCTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTc                                                  >  5:46410/1‑151 (MQ=255)
                                                                                                     acatacaGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTc                                                  >  2:1272327/1‑151 (MQ=255)
                                                                                                     acatacaGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTc                                                  >  5:425087/1‑151 (MQ=255)
                                                                                                     acaaaccGCGCCTACCGTGCCCCTCTCCGTGAGGTAGAGGGTTAGGGTGCGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTc                                                  <  2:884806/151‑1 (MQ=255)
                                                                                                       atacaGCCCCGAAGGGGCCCCTCTCCGTGCGGGAGTGGTTTTGGGTGCGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGc                                                <  1:1528072/151‑1 (MQ=255)
                                                                                                         acaGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTg                                              >  6:1548231/1‑151 (MQ=255)
                                                                                                          caGGGCCGAACGGGCCCCCCTCCCTGAGGGAGAGGGTTAGGGGGCGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGa                                             <  1:915953/151‑1 (MQ=255)
                                                                                                            gcgcCGACCGGTCCCCTCTCCCTGCGGGAGAGGGTTAGGGGGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATc                                           <  3:1476507/151‑1 (MQ=255)
                                                                                                            cgcgctacggggccccTGTCCCGCCGGGTGTGGTTTCGGTTGCGGGGG‑CGCAAACGACTCTGCCGCATTCCCTTTCGCCATGGGACCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATc                                           <  6:896437/139‑1 (MQ=255)
                                                                                                             cccccacggggccccTCCCCGTGTGGGAGTGGGTTCGGGTGCGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCg                                          <  6:577840/140‑1 (MQ=255)
                                                                                                              gcCGACCGGTCCCCGCTCCCTGAGGGAGAGGGTTCGGGTGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGa                                         <  6:1122692/151‑1 (MQ=255)
                                                                                                                 gAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGAttt                                      >  6:792306/1‑151 (MQ=255)
                                                                                                                 gAACGGGCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGAttt                                      <  3:1199741/151‑1 (MQ=255)
                                                                                                                  acggggccccTCTCCCTGAGGGAGTGGTTTTGGGGGGGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTc                                     <  5:852916/145‑1 (MQ=255)
                                                                                                                     ggaacggtgacccTGTGGGTGAGGTTTCGGGCGCGGGGG‑CCCACACGACAATGCCGCATTCCCTTTCGCCATGGGAGCCAGTTCCGCAGGCATCTCTTTACCCAGCCCCTGGACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTcgcg                                  <  7:123020/141‑1 (MQ=255)
                                                                                                                     ggTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCATGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTcgcg                                  >  2:813160/1‑151 (MQ=255)
                                                                                                                     ggTCCCCTCTCCCTGACGGAGAGGGTTAGGGTGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTCCCGCAGGCAACTCTTTACCCCGCCCCTGCACCAGCCAATCTAGCGTAATTTCGCTGCACGATATcgcc                                  >  8:696510/1‑150 (MQ=255)
                                                                                                                      gTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATTGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCgcgc                                 >  8:1157713/1‑151 (MQ=255)
                                                                                                                          ccTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGt                             >  1:1142573/1‑151 (MQ=255)
                                                                                                                             ctcCCTGAGGGAGAGGGTTAGGGTGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTc                            >  8:1294514/1‑149 (MQ=255)
                                                                                                                             cccccttcgggcgtgggTTGGGGGGTGGGGG‑CGAAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAg                          <  6:1432696/137‑1 (MQ=255)
                                                                                                                               cggtggggttgtgggTTGGGGTGTGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCg                        <  2:533737/139‑1 (MQ=255)
                                                                                                                                 gtgcgggtgggggTTCGGGGGGGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTc                      <  1:756242/141‑1 (MQ=255)
                                                                                                                                 cTGAGGGAGAGGGTTAGGGTGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTAGCGCCAGTCAGCGTc                      >  7:694027/1‑151 (MQ=255)
                                                                                                                                  tGAGGGAGAGGGTTAGGGTGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCGAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTAGCGCCAGTCAGCGTc                      >  3:130068/1‑150 (MQ=255)
                                                                                                                                  tGAGGGAGAGGGTTAGGGTGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATAGATTTCGCGCCAGTCAGCGTc                      >  7:1159448/1‑150 (MQ=255)
                                                                                                                                   gAGGGAGAGGGTTAGGGTGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCAt                    >  5:1592235/1‑151 (MQ=255)
                                                                                                                                   gAGGGAGAGGGTTAGGGTGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCAt                    >  8:602703/1‑151 (MQ=255)
                                                                                                                                    ggggtgggggTTCGGGGGCGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATc                   <  3:752007/144‑1 (MQ=255)
                                                                                                                                    ggggatcgggTTAGGGTGGGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATc                   <  1:2600/144‑1 (MQ=255)
                                                                                                                                    ggggCGAGGGTTCGGGGGCGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATc                   <  4:567415/150‑1 (MQ=255)
                                                                                                                                      ggggggggTTCGGGGGCGGGCGCCGCACACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCg                  <  8:351897/146‑1 (MQ=255)
                                                                                                                                         gtggtttggggTGCGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCAc              <  7:20751/143‑1 (MQ=255)
                                                                                                                                         gggtgTTGGGGGGCGGGGC‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCAc              <  4:1644400/147‑1 (MQ=255)
                                                                                                                                           gggTTCGGGTGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACt             <  6:241126/150‑1 (MQ=255)
                                                                                                                                            ggTTTGGGTGCGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACttt           <  2:638090/151‑1 (MQ=255)
                                                                                                                                            ggTTAGGGTGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACttt           >  3:618793/1‑151 (MQ=255)
                                                                                                                                            ggTTAGGGTGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACttt           >  5:1160434/1‑151 (MQ=255)
                                                                                                                                             gttgggggcaGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTc          <  8:1594212/142‑1 (MQ=255)
                                                                                                                                              tttggttGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTc          <  4:1117271/144‑1 (MQ=255)
                                                                                                                                               tcgggTGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCa         <  7:905647/148‑1 (MQ=255)
                                                                                                                                               tAGGGTGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCa         <  7:1359402/150‑1 (MQ=255)
                                                                                                                                               tAGGGTGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCAt        >  6:1604894/1‑151 (MQ=255)
                                                                                                                                                aGGGTGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCAtc       >  5:1409532/1‑151 (MQ=255)
                                                                                                                                                 ggggGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCAtct      <  3:1002586/151‑1 (MQ=255)
                                                                                                                                                   gggAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATctct    <  6:943116/149‑1 (MQ=255)
                                                                                                                                                   gTGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATctct    >  3:114526/1‑151 (MQ=255)
                                                                                                                                                   gTGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATctct    <  5:740834/151‑1 (MQ=255)
                                                                                                                                                      |                                                                                                                                                      
AAAATTGGTGAGCAGTGCGGCCTTTTCCCCTCACCCCGGCCCTCTCCCCGGAGGGGCGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGG‑CGCAAACGACTATGCCGCATTCCCTTTCGCCATGGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTT  >  DH1/102581‑102880

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑