Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*DH1613,7700CA33.8% 191.7 / 40.6 182intergenic (+631/+392)garK/yhaCglycerate 2‑kinase/pentapeptide repeats‑related protein
Reads supporting (aligned to +/- strand):  ref base C (81/15);  new base A (48/1);  total (165/17)
Fisher's exact test for biased strand distribution p-value = 1.19e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 183 total aligned reads displayed.

TATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGTACGTAATAAACCGTTCCGGCGGGTTTC  >  DH1/613623‑613919
                                                                                                                                                    |                                                                                                                                                       
tataCCCAAAAGAAAGCGGCTTATCGGTCAGTTTAACCTGGTTTACGTAAAAACCCGCTACGGCGGGTTTATGCTTTTGGAGTGGCAGAAATAGGAGGGACTGTCCACGACAATATACCAAAAAGATAGCGTATTGTAAGTCAGTTTCAc                                                                                                                                                       >  8:1306809/1‑150 (MQ=11)
    cccAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACCCTATCAACAAAACAACGCTGAACATCAGTCACATTAACCTGtt                                                                                                                                                  >  1:884543/1‑151 (MQ=11)
        aaagaaagCGGCTTATCGGTCAGTTTAACCTGGTTTACGTAAAAAACCGATACGGCGGGTTTAAGATTTTTGAGTGCCATATAGATCAAAACCTGTACCAGAAACTAAACACAAAAGAAATATGGTTATCTCTCAGTTTTACCGGtttaa                                                                                                                                               >  6:1235038/1‑148 (MQ=2)
                 ggCTTATCGGTCAGTTTCACCTGGTTTACGTAAAAACCCGGTTCGGCGGGTTTTTGATTTTGGAGTGCCAGAAATATGAAAGGCTGTCCCCGACACTATACACAAAAGAAAGCGCCTTATCGCTAATTTTAAAATTTTGTACGtaataaac                                                                                                                                     >  5:1227234/1‑149 (MQ=2)
                   cTTATCGGTCAGTTTCACCTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATAGCAAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATATACGTaaaaaacac                                                                                                                                   >  3:93822/1‑147 (MQ=11)
                     tATCGGTCAGTTTCACCTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTTGAGTGGCAGAAAGAGGAATGACTGTCCACGACAAGCTACGAAAAAGAAAGCGGCTTATCGGTCAGTTTAACGTTTTGTAAGTaaaaaaacgcg                                                                                                                                 >  1:712543/1‑145 (MQ=11)
                     tATCGGTCAGTTTCACCTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTAAGTTTAACCTGTTTTACGTAATAAACCGCt                                                                                                                                 >  4:408154/1‑151 (MQ=255)
                       tCGGTCAGTTTCACCTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTGACCTGATGTACGTAAAAACCCGGTTc                                                                                                                               >  1:428483/1‑151 (MQ=255)
                         ggTCAGTTTCACCTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTGACCTGATTTACGTAAAAAACCGATAcgg                                                                                                                             >  4:1210625/1‑151 (MQ=255)
                          gTCAGTTTCACCTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTAACCTGTTTTACGTAAAAACCCGATTcggc                                                                                                                            >  8:227841/1‑151 (MQ=25)
                           tCAGTTTCACCTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTGTTTTACGTAATAACCCGCTTcggcg                                                                                                                           >  1:667203/1‑151 (MQ=25)
                            cAGTTTCACCTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTAACCTGATTTACGTAAAAAACCGATAcggcgg                                                                                                                          >  8:809641/1‑151 (MQ=255)
                             aGTTTCACCTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTAACCTGTTTTACGTAATAACCCGATTCGGCggg                                                                                                                         >  1:1003872/1‑151 (MQ=255)
                             aGTTTCACCTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTAACCTGATTTACGTAATAAACCGCTACGGCggg                                                                                                                         >  2:1367588/1‑151 (MQ=255)
                               tttCACCTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTGATTTACGTAAAAACCCGATTCGGCGGGtt                                                                                                                       >  1:102167/1‑151 (MQ=18)
                               tttCACCTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTAACCTGTTTTACGTAAAAAACCGGTTCGGCGGGtt                                                                                                                       >  3:462971/1‑151 (MQ=255)
                                ttCACCTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTGACCTGTTGTACGTAAAAACCCGCTGCGGCGGGttt                                                                                                                      >  1:216662/1‑151 (MQ=255)
                                  cACCTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTGACCTGTTTTACGTAAAAACCCGGTACGGCGGGttta                                                                                                                     >  4:976438/1‑149 (MQ=255)
                                    ccTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTGATTTACGTAAAAACCCGCTACGGCGGGtttaac                                                                                                                   >  4:301482/1‑147 (MQ=16)
                                      tGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTGTTTTACGTAAAAACCCGGTTCGGCGGGTTTGTACtt                                                                                                              >  8:466029/1‑151 (MQ=255)
                                      tGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTTTACtt                                                                                                              >  7:1499270/1‑151 (MQ=38)
                                      tGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTAACCTGTTTTACGTAAAAACCCGATTCGGCGGGtttgtgatt                                                                                                                >  2:712640/1‑145 (MQ=255)
                                        gTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTGTACtttt                                                                                                            >  8:1499136/1‑151 (MQ=37)
                                        gTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTGCGGCGGGTGTGTACttgt                                                                                                            >  3:997559/1‑149 (MQ=255)
                                        atttACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACCCTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTGttt                                                                                                                                                 >  3:1073998/2‑116 (MQ=14)
                                         tttACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTGACGTGTTTTACGTAAAAAACCGGTGCGGCGGGTTTATACttttt                                                                                                           >  5:1467281/1‑150 (MQ=11)
                                           tACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTGACCTGTTTTACGTAAAAACCCGCTGCGGCGGGTTTGTGCttgttg                                                                                                          >  1:1505610/1‑146 (MQ=11)
                                             cGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTGACCTGATTTACGTAAAAAACCGGTCCGGCGGGTTTTTCCTTTTTGAgt                                                                                                       >  3:1442924/1‑150 (MQ=11)
                                                aaaaaCCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTGACCTGATTTACGTAATAACCCGGTGCGGCGGGTTTTAACTTTTTGAGGGGc                                                                                                    >  7:1325560/1‑151 (MQ=11)
                                                aaaaaCCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTAACCTGTTTTACGTAATAACCCGCTACGGCGGGTTTTAACTTGTGGAGTGGc                                                                                                    >  6:595370/1‑151 (MQ=11)
                                                   aaCCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTGACCTGTTTTACGTAAAAAACCGATTCGGCGGGTTTGTACTTTTTGAgtgccat                                                                                                  >  8:1482601/1‑144 (MQ=11)
                                                    aCCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTAACGGTCAGTTTAACCTGATTTACCTAAAAAACCGATACGGCGGGATTAAACTTTTagagtgcccta                                                                                                 >  6:1356562/1‑143 (MQ=11)
                                                       cGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTGACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTCTCCTTTTTGAgtgcgagtt                                                                                                >  7:1399257/1‑140 (MQ=11)
                                                       cGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTAACCTGATTTACGTAAAAAACCGATACGGCGGGTTTTTAATTTTTGAgtgggatatatt                                                                                             >  6:326131/1‑143 (MQ=11)
                                                        gCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTAACCTGTTTTACGTAAAAAACCGATACGGCGGGTTTATGATTTTGGAGTGGCATaaata                                                                                             >  5:824866/1‑148 (MQ=11)
                                                          ttgggcggGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTAACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGTGGCAGAAATatgt                                                                                          >  5:349967/4‑150 (MQ=255)
                                                          ttCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTAGAGGGCAATATCCCACATATCAAGGGGAGTATCGGTCAGTTTCCGCTGTTTTACGTAAAAACGCGATTAGGAGGGTTTTTGGTTTTGGAGGGGGAGCTAGatgc                                                                                          >  3:768674/1‑150 (MQ=2)
                                                          ttCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACAGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTGTTTTACGTAAAAAACCGATACGGCGGGTTTTTACTTTTTGAGTGGCATAAAgt                                                                                             >  7:712884/1‑147 (MQ=11)
                                                            cggcggGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTAACCTGATTTACGTAAAAAACCGATTCGGCGGGTATAAAATTTTGGAGTGGCatatataaaaa                                                                                         >  8:1043621/1‑140 (MQ=11)
                                                              gcggGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTGCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAgtagaaagc                                                                                      >  8:575549/1‑143 (MQ=255)
                                                                gggTTTTTGCTTTTGGAGTTGATTAAACTGCAATGACTGCCCACGACACTATACCCTAAACATCGCGTCTTATCGGTCTGTTTCACCTTCTTTACGTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACt                                                                                    <  7:1117916/151‑1 (MQ=11)
                                                                  gTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTGTTTTACGTAAAAAACCGCTGCGGCGGGTTTTAAATTTTTGAGTGCCAGAAatatcatccacatt                                                                                  >  7:158924/1‑141 (MQ=11)
                                                                   tttttGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTAACCTGTTTTACGTAATAAACCGATTCGGCGGGTTTTTAATTTTTGAGTGGGAGTAATATGAATGACTTTc                                                                                 >  7:1430386/1‑151 (MQ=11)
                                                                       catctttgcccgggCAGAAAGATCACTCACTGCCCACGACATTATATACAATATACTGCGCCTTATCTGTCATTTTCACATTTTTTACGTATTAACCTGCATGTGCGTGTTTTTATTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACg                                                                             <  4:622013/140‑1 (MQ=2)
                                                                        gCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTGACCTGTTGTACGTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGCGAGAAAGAGGACTGACTGTcgccg                                                                             >  7:792853/1‑146 (MQ=11)
                                                                           tttGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTAACCTGATTTACGTAAAAACCCGATACGGCGGGTTTATACTTTTTGAGAGAAAGAAAGATGAATGACTGTCCACGaca                                                                          >  8:1444038/1‑150 (MQ=11)
                                                                            ttGGAGGGGCAGAAAGATGAATGACTGTCCACGACAGTATACGAAAAAGCCAGGGGCGTAGAGGTCACTTTCCCGTGTTTTACGTAAATACCCGGGTCGGAGGGTTTTTACTGTTGGGGGGGCAGCATGctgaatgcgtggcgccgcgcgg                                                                        >  3:621548/1‑136 (MQ=2)
                                                                                       gAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTGACCTGTTTTACGTAATAACCCGCTGCGGCGGGTTTTTCCTTGTTGAGTGCCCGAAAGAGGTAACTCAGTCCCCGACACTGAACTCaaa                                                               >  1:1349061/1‑149 (MQ=11)
                                                                                          aGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTAACCTGTTTTACGTAAAAACCCGATACGGCGGGTTTTTACTTTTGGAGTGGCAGAAAGATGAAACACTTTCGACGACACTATAAACAaaagaa                                                           >  6:654622/1‑150 (MQ=11)
                                                                                              gaatgaCTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTGACCTGTTTTACGTAAAAACCCGATTCGGCGGGTTTGTACTTTTGGAGTGCGAGAAAGATTAATCGCTTTCCCCGACACGAAACTAAaaagaaatctc                                                      >  5:1399805/1‑147 (MQ=11)
                                                                                              gaatgaCTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTGTAATTTTGGAGGGGCAGATATATCAAAGACTTGCGCCGACACTATACCCAAAAGAAAGccc                                                      >  3:744830/1‑149 (MQ=11)
                                                                                               aatgaCTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTTTAATTTTGGAGGGGCAGAAAGATGTCAGCCTGTCCCCGACACTCGACACAAAAGAAAGCgg                                                      >  7:651910/1‑150 (MQ=11)
                                                                                                 ggccttgagaaaacacTGTCCCCCAAAGAACCCGGCTTATCGGTCATTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTTTTCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCtt                                                   <  5:245818/139‑1 (MQ=11)
                                                                                                    cTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTGCGGCGGGTTTGTACTTTTGGAGTGGCAGAAAGATGATTGCGTTTCGACGAGACTGTAGCCAAATGACAGCGGCTGATc                                                >  3:1254795/1‑151 (MQ=11)
                                                                                                      gTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTGACCTGTTTTACGTAAAAACCCGGTTCGGCGGGTTTTTAATTTTGGAGTGGCATAAATAGGAAACAGATTCCACGACAATAAACACAAAAGAAAGCGGATTATCgg                                              >  2:762095/1‑151 (MQ=11)
                                                                                                       tCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTAACCTGATTTACGTAAAAACCCGCTGCGGCGGGTTTATCATTTTGGAGGGGCAGAAAGAACATTCCCTGTCCGCGACACTATACACAAAAGAAAGCgcatgatcgct                                             >  2:229072/1‑141 (MQ=11)
                                                                                                        aatatacacTTTACCCTAAAGAACGGGGCTTTTCGGTAAGTTTTACCTGTTTTAGTTAACAACGGTCTTCTGCGGGTTTTTGTTTTTGTTGGTGCTTAATTATGAATGACTTTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTc                                            <  8:672312/146‑1 (MQ=2)
                                                                                                         cACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTGTTTTACGTAAAAACCCGATTCGGCGGGTTTTTACTTTTGGAGTGGCATAAAGATGAATGCCTGTCGCCGAGACTAGCCCCAAAAGAAAGCGGCTTATCGGTc                                            >  1:76302/1‑150 (MQ=11)
                                                                                                          aCGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTAACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTGTAATTTTGGAGTGGCAGAAAGATGAAACCCTGTCCACGACACTATAGAAAAAAGACAGCGCCTTAACgcaaat                                          >  3:197166/1‑146 (MQ=11)
                                                                                                           cGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTGACCTGTTTTACGTAAAAAACCGGTGCGGCGGGTTTGTGCTTGTGGAGGGGGATATAGATGTGACCCATTCCACGACACGGAACGCACAAGAAAGCGCCTGATCGCTCAGt                                         >  6:730269/1‑151 (MQ=2)
                                                                                                           cGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTAACCTGTTTTACGTAAAAACCCGGTGCGGCGGGTTTGTACTTGTTGAGTGGGAGAAAGAGGAAACGCTTTCGGCGACACTCTCGCCAAAAGAAAGccaaatatcgcacagt                                         >  7:1241022/1‑136 (MQ=2)
                                                                                                            gACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTGTTTTACGTAAAAAACCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGtt                                        >  1:1614598/1‑151 (MQ=25)
                                                                                                              cacTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTGACCTGTTTTACGTAAAAACCCGGTGCGGCGGGTTTATGCTTTTTGAGGGGGAGATAGAGGTGTGGGTTGCGGCGACACGAGCCCCAAAAGCAAGCGGcgtcgccggcagtgtt                                      >  3:1276323/1‑136 (MQ=2)
                                                                                                                cTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTGACCTGTTTTACGTAAAAACCCGGTGCGGCGGGTTTTTACTTTTTGAGTGGCAGAAATAGGAAACCCTTTCCCCGACACTATCCTCAAAAGAAAGCTGATTATCGGTAAGTTTTa                                     >  1:1306645/1‑150 (MQ=11)
                                                                                                                   tttttaaaataatccGGCTAATCGGTATTTTTAAACTTTTTTCCTTAATATACCGCTTCTGGTGGTTTTTACTTTTGGAGGGGCATAAATATTAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCt                                  <  2:1632573/136‑1 (MQ=2)
                                                                                                                    accgcagcccaaccGGCGTATCGGTCCGTTTCCCCTGTTTTACGTAAAAACCCGCTTCGGCGTTTTTTTTCTTTTGGAGGGGCAGAAACAAGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGa                                <  3:34420/138‑1 (MQ=11)
                                                                                                                    aCCCAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTTTCCACGACACTATACCCTAAAGAAAGCGGCTTATCGGTCAGTTTTaaatg                                 >  1:1168235/1‑146 (MQ=255)
                                                                                                                    aCCCAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTGTTTTACGTAAAAACCCGATTCGGCGGGTTTTTACTTTTGGAGTGGCAGAAATATGAAAGACTGTCCACGACACTATAAAAAAAAGAAAGCGGATTAACGGTAAGTTTTaaatt                                 >  4:149554/1‑146 (MQ=11)
                                                                                                                     cccAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTGTTTTACGTAAAAACCCGATTCGGCGGGTTTATACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTAAACCCAAAAGACAGCGCCTTATCGGACAGTATTAACTGAt                               >  8:271570/1‑151 (MQ=11)
                                                                                                                     aacAAAAGAACCCGGCTTATGCGGACGTTGCACCTGTTTACGGTAAAACCCCCGTGCGGGGTTTTTATCTGTTTGAGGGGGCCCACCCATGAAGGCCTCGCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGAt                               <  7:439842/149‑1 (MQ=2)
                                                                                                                      ccAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATCACTGTCCACGACACTATACGCAAAAGAAAGCTCCTTATCGGTCATTTTTACGTGATg                              >  3:993211/1‑151 (MQ=14)
                                                                                                                       cAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGt                             >  7:55152/1‑151 (MQ=39)
                                                                                                                        aaaaGAAAGCGGCTTATCGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTACGGCGGGTTTATACTTTTGGAGGGCCAGAAAGATGAATGACTGTCCACGACACTATAACCAAAAGCAACCGGCTTAACGCTCAGTTTTAAATGATGt                             >  2:1522075/1‑150 (MQ=11)
                                                                                                                           agaaagCGGCTTATCGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGTGGCAGAAAGATGAAACACTGTCCACGACACTATACCCAAAAGCAAGCGCCTTATCGGAAAGTTTTAAATGATGTACg                          >  4:1646812/1‑150 (MQ=14)
                                                                                                                           agaaagCGGCTTATCGGTCAGTTTAACCTGTTTTACGTAAAAACCCGATTCGGCGGGTTTTTAATTTTTGAGTGGCAGAAAGAAGAAACACATTCCACGACACAATAAACAAAAGAAAGCAACATATCGGTAAGTATTaaaatatcaaagt                         >  6:1445563/1‑139 (MQ=2)
                                                                                                                           agaaagCGGCTTATCGGTCAGTTTAACCTCATTTACGTAAAAACCCGCTTCGGCGGGTTTAAACTTTTTGAGTGCGAGAAATAACAATCAGAGGCCCCGACACTAACCACAACAGAAACCAGCATATCGCTAAGtatataaagatgaaac                          >  8:974444/1‑135 (MQ=2)
                                                                                                                              gcagccgatctgcGGTCCGTTTCACCTGTTTTACGGAAAAACCCGGTTCGGGGTTTTTTTCGTTTTGGAGGGGCATAAAGATCAATCACTGTCCACGACCCTATACCCAAAAGAAATCGGCTTATCGGTCAGTTTTACCTGATGTACGtaa                       <  3:1492349/139‑1 (MQ=255)
                                                                                                                              aagCGGCTTATCGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACAGTCCACGACACTATACACAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGTACGtaat                      >  6:678480/1‑151 (MQ=255)
                                                                                                                                 cGGCTTATCGGTCAGTTTAACCTGATTTACGTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGTGGCAGAAAGATGAAAGACTGTCCACCACACTATAAACAAAAGAAAGCGGCATATCGCACAGTTATACATGATGAACCtaat                      >  4:950409/1‑148 (MQ=11)
                                                                                                                                  ggCTTATCGGTCAGTTTCACCTGTTTTATGTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGTACGTAATAAAc                  >  6:1525961/1‑151 (MQ=255)
                                                                                                                                  ggCTTATCGGTCAGTTTCACCTGTTTTACGTAAAAAACCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGAAGAATGACTGTCCACGACACTATACCAAAAAGAAAGCGGCTTATCGCTCAGTTTTACCTGATGTACGTAATAAAc                  >  4:1117204/1‑151 (MQ=255)
                                                                                                                                  ggCTTATCGGTCAGTTTAACCTGTTTTACGTAAAAACACGGTGCGGCGGGTGTTTACTTTTGGAGGGGCAGAAAGAAGAATGACTGTCCACGAGACAATACAAAAAATAAATACTATTATAGGTCAGTATTACCTTATGAACGAAATAAAc                  >  1:1259014/1‑151 (MQ=9)
                                                                                                                                    cTTATCGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGTACGTAATAAACCg                >  5:635715/1‑151 (MQ=255)
                                                                                                                                    cTTATCGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGTACGTAATAAACCg                >  4:104949/1‑151 (MQ=255)
                                                                                                                                    cTTATCGGTCAGTTTAACCTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGATTTTGGAGGGGCAGAAAGATGAAGCACTGTCCACGACACAATAACAAAAAGAAAGCGGATTATCGGTCATTTTAAAATTTTGTAAGTAATAAAcc                 >  6:568991/1‑150 (MQ=11)
                                                                                                                                     tttttttttCAGTCTCACTTGTTATACGTAAAACCCTGCTTGGGCGTGTTTTTACTTTTTGTGGGGTACAAATATTAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGTACGTAATAAAcc                 <  7:23850/142‑1 (MQ=14)
                                                                                                                                     ttATCGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGATTGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGTACGTAATAAACCGt               >  4:767745/1‑151 (MQ=255)
                                                                                                                                     attaccttcttgTTTCCCTTGTGCTACGTAAATACATTTTTCTGGGGGTTTTTATTTTTTTAGGGGCTTAAAGTTTAATTAATTTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGTACGTAATAAACCg                <  8:848587/140‑1 (MQ=9)
                                                                                                                                        tCGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGTACGTAATAAACCGTTcc            >  8:398907/1‑151 (MQ=255)
                                                                                                                                           ggTCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGTACGTAATAAACCGTTCcgg          >  5:1092581/1‑151 (MQ=255)
                                                                                                                                           ggTCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGTACGTAATAAACCGTTCcgg          >  6:1567493/1‑151 (MQ=255)
                                                                                                                                             tCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGTACGTAATAAACCGTTCcggcg        >  5:1242083/1‑151 (MQ=255)
                                                                                                                                             tCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGTACGTAATAAACCGTTCcggcg        >  3:245789/1‑151 (MQ=255)
                                                                                                                                             tCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGTACGTAATAAACCGTTCcggcg        >  5:960824/1‑151 (MQ=255)
                                                                                                                                             tCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGTACGTAATAAACCGTTCcggcg        >  3:1607171/1‑151 (MQ=255)
                                                                                                                                              cAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGTACGTAATAAACCGTTCcggcgg       >  2:582934/1‑151 (MQ=255)
                                                                                                                                              cAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGTACGTAATAAAACGTTCcggcgg       >  3:1426126/1‑151 (MQ=255)
                                                                                                                                               aGTTTCACCTGATTTACGTAAAAACCCGCTTTTGTGTTTTTTTTCTTTTGTAGGGGGAGAAATATTAATGACTGCCCACGACTCTATACCAAAAAGATATCGGGTTATCGGTCAGTTTTACCTGATGTACGTAATAAACCGTTCCGGCggg      <  2:432537/151‑1 (MQ=14)
                                                                                                                                                gTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGTACGTAATAAACCGTTCCGGCGGGt     >  3:1575976/1‑151 (MQ=255)
                                                                                                                                                 tttCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGGACGTAATAAACCGTTCCGGCGGGtt    >  6:650437/1‑151 (MQ=255)
                                                                                                                                                    |                                                                                                                                                       
TATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGTACGTAATAAACCGTTCCGGCGGGTTTC  >  DH1/613623‑613919

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: