Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | DH1 | 613,770 | 0 | C | A | 33.8% | 191.7 / 40.6 | 182 | intergenic (+631/+392) | garK/yhaC | glycerate 2‑kinase/pentapeptide repeats‑related protein |
Reads supporting (aligned to +/- strand): ref base C (81/15); new base A (48/1); total (165/17) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.19e-02 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 183 total aligned reads displayed.
TATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTAT‑CGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTTTA‑CT‑TTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGTACGTAATAAACCGTTCCGGCGGGTTTC > DH1/613623‑613919 | tataCCCAAAAGAAAGCGGCTTATCGGTCAGTTTAACCTGGTTTACGTAAAAACCCGCTACGGCGGGTTTATGCTTTTGGAGTGGCAGAAATAGGAGGGACTGTCCACGACAATATACCAAAAAGATAGCGTATTGT‑AAGTCAGTTTCAc > 8:1306809/1‑150 (MQ=11) cccAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACCCTATCAACAAAACAACGCTGAACAT‑CAGTCACATTAACCTGtt > 1:884543/1‑151 (MQ=11) aaagaaagCGGCTTATCGGTCAGTTTAACCTGGTTTACGTAAAAAACCGATACGGCGGGTTTAAGATTTTTGAGTGCCATATAGATCAAAACCTGTACCAGAAACTAAACACAAAAGAAATATGGTTAT‑CTCTCAGTTTTACCGGtttaa > 6:1235038/1‑148 (MQ=2) ggCTTATCGGTCAGTTTCACCTGGTTTACGTAAAAACCCGGTTCGGCGGGTTTTTGATTTTGGAGTGCCAGAAATATGAAAGGCTGTCCCCGACACTATACACAAAAGAAAGCGCCTTAT‑CGCTAATTTTAAAATTTTGTACGtaataaac > 5:1227234/1‑149 (MQ=2) cTTATCGGTCAGTTTCACCTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATAGCAAAAAGAAAGCGGCTTAT‑CGGTCAGTTTTACCTGATATACGTaaaaaacac > 3:93822/1‑147 (MQ=11) tATCGGTCAGTTTCACCTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTTGAGTGGCAGAAAGAGGAATGACTGTCCACGACAAGCTACGAAAAAGAAAGCGGCTTAT‑CGGTCAGTTTAACGTTTTGTAAGTaaaaaaacgcg > 1:712543/1‑145 (MQ=11) tATCGGTCAGTTTCACCTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTAT‑CGGTAAGTTTAACCTGTTTTACGTAATAAACCGCt > 4:408154/1‑151 (MQ=255) tCGGTCAGTTTCACCTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTAT‑CGGTCAGTTTGACCTGATGTACGTAAAAACCCGGTTc > 1:428483/1‑151 (MQ=255) ggTCAGTTTCACCTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTAT‑CGGTCAGTTTGACCTGATTTACGTAAAAAACCGATAcgg > 4:1210625/1‑151 (MQ=255) gTCAGTTTCACCTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTAT‑CGGTCAGTTTAACCTGTTTTACGTAAAAACCCGATTcggc > 8:227841/1‑151 (MQ=25) tCAGTTTCACCTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTAT‑CGGTCAGTTTCACCTGTTTTACGTAATAACCCGCTTcggcg > 1:667203/1‑151 (MQ=25) cAGTTTCACCTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTAT‑CGGTCAGTTTAACCTGATTTACGTAAAAAACCGATAcggcgg > 8:809641/1‑151 (MQ=255) aGTTTCACCTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTAT‑CGGTCAGTTTAACCTGTTTTACGTAATAACCCGATTCGGCggg > 1:1003872/1‑151 (MQ=255) aGTTTCACCTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTAT‑CGGTCAGTTTAACCTGATTTACGTAATAAACCGCTACGGCggg > 2:1367588/1‑151 (MQ=255) tttCACCTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTAT‑CGGTCAGTTTCACCTGATTTACGTAAAAACCCGATTCGGCGGGtt > 1:102167/1‑151 (MQ=18) tttCACCTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTAT‑CGGTCAGTTTAACCTGTTTTACGTAAAAAACCGGTTCGGCGGGtt > 3:462971/1‑151 (MQ=255) ttCACCTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTAT‑CGGTCAGTTTGACCTGTTGTACGTAAAAACCCGCTGCGGCGGGttt > 1:216662/1‑151 (MQ=255) cACCTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTAT‑CGGTCAGTTTGACCTGTTTTACGTAAAAACCCGGTACGGCGGGttta > 4:976438/1‑149 (MQ=255) ccTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTAT‑CGGTCAGTTTCACCTGATTTACGTAAAAACCCGCTACGGCGGGtttaac > 4:301482/1‑147 (MQ=16) tGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTAT‑CGGTCAGTTTCACCTGTTTTACGTAAAAACCCGGTTCGGCGGGTTTGTA‑Ct‑t > 8:466029/1‑151 (MQ=255) tGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTAT‑CGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTTTA‑Ct‑t > 7:1499270/1‑151 (MQ=38) tGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTAT‑CGGTCAGTTTAACCTGTTTTACGTAAAAACCCGATTCGGCGGGtttgtgatt > 2:712640/1‑145 (MQ=255) gTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTAT‑CGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTGTA‑Ct‑ttt > 8:1499136/1‑151 (MQ=37) gTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTAT‑CGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTGCGGCGGGTGTGTA‑Ct‑tgt > 3:997559/1‑149 (MQ=255) atttACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACCCTATACCCAAAAGAAAGCGGCTTAT‑CGGTCAGTTTCACCTGttt > 3:1073998/2‑116 (MQ=14) tttACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTAT‑CGGTCAGTTTGACGTGTTTTACGTAAAAAACCGGTGCGGCGGGTTTATA‑Ct‑tttt > 5:1467281/1‑150 (MQ=11) tACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTAT‑CGGTCAGTTTGACCTGTTTTACGTAAAAACCCGCTGCGGCGGGTTTGTG‑Ct‑tgttg > 1:1505610/1‑146 (MQ=11) cGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTAT‑CGGTCAGTTTGACCTGATTTACGTAAAAAACCGGTCCGGCGGGTTTTTC‑CT‑TTTTGAgt > 3:1442924/1‑150 (MQ=11) aaaaaCCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTAT‑CGGTCAGTTTGACCTGATTTACGTAATAACCCGGTGCGGCGGGTTTTAA‑CT‑TTTTGAGGGGc > 7:1325560/1‑151 (MQ=11) aaaaaCCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTAT‑CGGTCAGTTTAACCTGTTTTACGTAATAACCCGCTACGGCGGGTTTTAA‑CT‑TGTGGAGTGGc > 6:595370/1‑151 (MQ=11) aaCCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTAT‑CGGTCAGTTTGACCTGTTTTACGTAAAAAACCGATTCGGCGGGTTTGTA‑CT‑TTTTGAgtgccat > 8:1482601/1‑144 (MQ=11) aCCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTAA‑CGGTCAGTTTAACCTGATTTACCTAAAAAACCGATACGGCGGGATTAAA‑CT‑TTTagagtgcccta > 6:1356562/1‑143 (MQ=11) cGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTAT‑CGGTCAGTTTGACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTCTC‑CT‑TTTTGAgtgcgagtt > 7:1399257/1‑140 (MQ=11) cGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTAT‑CGGTCAGTTTAACCTGATTTACGTAAAAAACCGATACGGCGGGTTTTTA‑AT‑TTTTGAgtgggatatatt > 6:326131/1‑143 (MQ=11) gCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTAT‑CGGTCAGTTTAACCTGTTTTACGTAAAAAACCGATACGGCGGGTTTATG‑AT‑TTTGGAGTGGCATaaata > 5:824866/1‑148 (MQ=11) ttgggcggGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTAT‑CGGTCAGTTTAACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTTTG‑CT‑TTTGGAGTGGCAGAAATatgt > 5:349967/4‑150 (MQ=255) ttCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTAGAGGGCAATATCCCACATATCAAGGGGAGTAT‑CGGTCAGTTTCCGCTGTTTTACGTAAAAACGCGATTAGGAGGGTTTTTG‑GT‑TTTGGAGGGGGAGCTAGatgc > 3:768674/1‑150 (MQ=2) ttCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACAGTCCACGACACTATACCCAAAAGAAAGCGGCTTAT‑CGGTCAGTTTCACCTGTTTTACGTAAAAAACCGATACGGCGGGTTTTTA‑CT‑TTTTGAGTGGCATAAAgt > 7:712884/1‑147 (MQ=11) cggcggGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTAT‑CGGTCAGTTTAACCTGATTTACGTAAAAAACCGATTCGGCGGGTATAAA‑AT‑TTTGGAGTGGCatatataaaaa > 8:1043621/1‑140 (MQ=11) gcggGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTAT‑CGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTGCGGCGGGTTTTTA‑CT‑TTTGGAGGGGCAGAAAgtagaaagc > 8:575549/1‑143 (MQ=255) gggTTTTTGCTTTTGGAGTTGATTAAACTGCAATGACTGCCCACGACACTATACCCTAAACATCGCGTCTTAT‑CGGTCTGTTTCACCTTCTTTACGTAAAAACCCGCTTCGGCGGGTTTTTA‑CT‑TTTGGAGGGGCAGAAAGATGAATGACt < 7:1117916/151‑1 (MQ=11) gTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTAT‑CGGTCAGTTTCACCTGTTTTACGTAAAAAACCGCTGCGGCGGGTTTTAA‑AT‑TTTTGAGTGCCAGAAatatcatccacatt > 7:158924/1‑141 (MQ=11) tttttGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTAT‑CGGTCAGTTTAACCTGTTTTACGTAATAAACCGATTCGGCGGGTTTTTA‑AT‑TTTTGAGTGGGAGTAATATGAATGACTTTc > 7:1430386/1‑151 (MQ=11) catctttgcccgggCAGAAAGATCACTCACTGCCCACGACATTATATACAATATACTGCGCCTTAT‑CTGTCATTTTCACATTTTTTACGTATTAACCTGCATGTGCGTGTTTTTA‑TT‑TTTGGAGGGGCAGAAAGATGAATGACTGTCCACg < 4:622013/140‑1 (MQ=2) gCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTAT‑CGGTCAGTTTGACCTGTTGTACGTAAAAACCCGCTTCGGCGGGTTTTTA‑CT‑TTTGGAGGGCGAGAAAGAGGACTGACTGTcgccg > 7:792853/1‑146 (MQ=11) tttGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTAT‑CGGTCAGTTTAACCTGATTTACGTAAAAACCCGATACGGCGGGTTTATA‑CT‑TTTTGAGAGAAAGAAAGATGAATGACTGTCCACGaca > 8:1444038/1‑150 (MQ=11) ttGGAGGGGCAGAAAGATGAATGACTGTCCACGACAGTATACGAAAAAGCCAGGGGCGTAG‑AGGTCACTTTCCCGTGTTTTACGTAAATACCCGGGTCGGAGGGTTTTTA‑CT‑GTTGGGGGGGCAGCATGctgaatgcgtggcgccgcgcgg > 3:621548/1‑136 (MQ=2) gAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTAT‑CGGTCAGTTTGACCTGTTTTACGTAATAACCCGCTGCGGCGGGTTTTTC‑CT‑TGTTGAGTGCCCGAAAGAGGTAACTCAGTCCCCGACACTGAACTCaaa > 1:1349061/1‑149 (MQ=11) aGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTAT‑CGGTCAGTTTAACCTGTTTTACGTAAAAACCCGATACGGCGGGTTTTTA‑CT‑TTTGGAGTGGCAGAAAGATGAAACACTTTCGACGACACTATAAACAaaagaa > 6:654622/1‑150 (MQ=11) gaatgaCTGTCCACGACACTATACCCAAAAGAAAGCGGCTTAT‑CGGTCAGTTTGACCTGTTTTACGTAAAAACCCGATTCGGCGGGTTTGTA‑CT‑TTTGGAGTGCGAGAAAGATTAATCGCTTTCCCCGACACGAAACTAAaaagaaatctc > 5:1399805/1‑147 (MQ=11) gaatgaCTGTCCACGACACTATACCCAAAAGAAAGCGGCTTAT‑CGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTGTA‑AT‑TTTGGAGGGGCAGATATATCAAAGACTTGCGCCGACACTATACCCAAAAGAAAGccc > 3:744830/1‑149 (MQ=11) aatgaCTGTCCACGACACTATACCCAAAAGAAAGCGGCTTAT‑CGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTTTA‑AT‑TTTGGAGGGGCAGAAAGATGTCAGCCTGTCCCCGACACTCGACACAAAAGAAAGCgg > 7:651910/1‑150 (MQ=11) ggccttgagaaaacacTGTCCCCCAAAGAACCCGGCTTAT‑CGGTCATTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTTTT‑CT‑TTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCtt < 5:245818/139‑1 (MQ=11) cTGTCCACGACACTATACCCAAAAGAAAGCGGCTTAT‑CGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTGCGGCGGGTTTGTA‑CT‑TTTGGAGTGGCAGAAAGATGATTGCGTTTCGACGAGACTGTAGCCAAATGACAGCGGCTGATc > 3:1254795/1‑151 (MQ=11) gTCCACGACACTATACCCAAAAGAAAGCGGCTTAT‑CGGTCAGTTTGACCTGTTTTACGTAAAAACCCGGTTCGGCGGGTTTTTA‑AT‑TTTGGAGTGGCATAAATAGGAAACAGATTCCACGACAATAAACACAAAAGAAAGCGGATTATCgg > 2:762095/1‑151 (MQ=11) tCCACGACACTATACCCAAAAGAAAGCGGCTTAT‑CGGTCAGTTTAACCTGATTTACGTAAAAACCCGCTGCGGCGGGTTTATC‑AT‑TTTGGAGGGGCAGAAAGAACATTCCCTGTCCGCGACACTATACACAAAAGAAAGCgcatgatcgct > 2:229072/1‑141 (MQ=11) aatatacacTTTACCCTAAAGAACGGGGCTTTT‑CGGTAAGTTTTACCTGTTTTAGTTAACAACGGTCTTCTGCGGGTTTTTG‑TT‑TTTGTTGGTGCTTAATTATGAATGACTTTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTc < 8:672312/146‑1 (MQ=2) cACGACACTATACCCAAAAGAAAGCGGCTTAT‑CGGTCAGTTTCACCTGTTTTACGTAAAAACCCGATTCGGCGGGTTTTTA‑CT‑TTTGGAGTGGCATAAAGATGAATGCCTGTCGCCGAGACTAGCCCCAAAAGAAAGCGGCTTATCGGTc > 1:76302/1‑150 (MQ=11) aCGACACTATACCCAAAAGAAAGCGGCTTAT‑CGGTCAGTTTAACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTGTA‑AT‑TTTGGAGTGGCAGAAAGATGAAACCCTGTCCACGACACTATAGAAAAAAGACAGCGCCTTAACgcaaat > 3:197166/1‑146 (MQ=11) cGACACTATACCCAAAAGAAAGCGGCTTAT‑CGGTCAGTTTGACCTGTTTTACGTAAAAAACCGGTGCGGCGGGTTTGTG‑CT‑TGTGGAGGGGGATATAGATGTGACCCATTCCACGACACGGAACGCACAAGAAAGCGCCTGATCGCTCAGt > 6:730269/1‑151 (MQ=2) cGACACTATACCCAAAAGAAAGCGGCTTAT‑CGGTCAGTTTAACCTGTTTTACGTAAAAACCCGGTGCGGCGGGTTTGTA‑CT‑TGTTGAGTGGGAGAAAGAGGAAACGCTTTCGGCGACACTCTCGCCAAAAGAAAGccaaatatcgcacagt > 7:1241022/1‑136 (MQ=2) gACACTATACCCAAAAGAAAGCGGCTTAT‑CGGTCAGTTTCACCTGTTTTACGTAAAAAACCGCTTCGGCGGGTTTTTA‑CT‑TTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGtt > 1:1614598/1‑151 (MQ=25) cacTATACCCAAAAGAAAGCGGCTTAT‑CGGTCAGTTTGACCTGTTTTACGTAAAAACCCGGTGCGGCGGGTTTATG‑CT‑TTTTGAGGGGGAGATAGAGGTGTGGGTTGCGGCGACACGAGCCCCAAAAGCAAGCGGcgtcgccggcagtgtt > 3:1276323/1‑136 (MQ=2) cTATACCCAAAAGAAAGCGGCTTAT‑CGGTCAGTTTGACCTGTTTTACGTAAAAACCCGGTGCGGCGGGTTTTTA‑CT‑TTTTGAGTGGCAGAAATAGGAAACCCTTTCCCCGACACTATCCTCAAAAGAAAGCTGATTATCGGTAAGTTTTa > 1:1306645/1‑150 (MQ=11) tttttaaaataatccGGCTAAT‑CGGTATTTTTAAACTTTTTTCCTTAATATACCGCTTCTGGTGGTTTTTA‑CT‑TTTGGAGGGGCATAAATATTAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCt < 2:1632573/136‑1 (MQ=2) accgcagcccaaccGGCGTAT‑CGGTCCGTTTCCCCTGTTTTACGTAAAAACCCGCTTCGGCGTTTTTTTT‑CT‑TTTGGAGGGGCAGAAACAAGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGa < 3:34420/138‑1 (MQ=11) aCCCAAAAGAAAGCGGCTTAT‑CGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTTTA‑CT‑TTTGGAGGGGCAGAAAGATGAATGACTTTCCACGACACTATACCCTAAAGAAAGCGGCTTATCGGTCAGTTTTaaatg > 1:1168235/1‑146 (MQ=255) aCCCAAAAGAAAGCGGCTTAT‑CGGTCAGTTTCACCTGTTTTACGTAAAAACCCGATTCGGCGGGTTTTTA‑CT‑TTTGGAGTGGCAGAAATATGAAAGACTGTCCACGACACTATAAAAAAAAGAAAGCGGATTAACGGTAAGTTTTaaatt > 4:149554/1‑146 (MQ=11) cccAAAAGAAAGCGGCTTAT‑CGGTCAGTTTCACCTGTTTTACGTAAAAACCCGATTCGGCGGGTTTATA‑CT‑TTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTAAACCCAAAAGACAGCGCCTTATCGGACAGTATTAACTGAt > 8:271570/1‑151 (MQ=11) aacAAAAGAACCCGGCTTATGCGGAC‑GTTGCACCTG‑TTTACGGTAAAACCCCCGT‑GCGGGGTTTTTATCTGTTTGAGGGGGCCCACCCATGAAGGCCTCGCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGAt < 7:439842/149‑1 (MQ=2) ccAAAAGAAAGCGGCTTAT‑CGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTTTA‑CT‑TTTGGAGGGGCAGAAAGATGAATCACTGTCCACGACACTATACGCAAAAGAAAGCTCCTTATCGGTCATTTTTACGTGATg > 3:993211/1‑151 (MQ=14) cAAAAGAAAGCGGCTTAT‑CGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTTTA‑CT‑TTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGt > 7:55152/1‑151 (MQ=39) aaaaGAAAGCGGCTTAT‑CGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTACGGCGGGTTTATA‑CT‑TTTGGAGGGCCAGAAAGATGAATGACTGTCCACGACACTATAACCAAAAGCAACCGGCTTAACGCTCAGTTTTAAATGATGt > 2:1522075/1‑150 (MQ=11) agaaagCGGCTTAT‑CGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTTTA‑CT‑TTTGGAGTGGCAGAAAGATGAAACACTGTCCACGACACTATACCCAAAAGCAAGCGCCTTATCGGAAAGTTTTAAATGATGTACg > 4:1646812/1‑150 (MQ=14) agaaagCGGCTTAT‑CGGTCAGTTTAACCTGTTTTACGTAAAAACCCGATTCGGCGGGTTTTTA‑AT‑TTTTGAGTGGCAGAAAGAAGAAACACATTCCACGACACAATAAACAAAAGAAAGCAACATATCGGTAAGTATTaaaatatcaaagt > 6:1445563/1‑139 (MQ=2) agaaagCGGCTTAT‑CGGTCAGTTTAACCTCATTTACGTAAAAACCCGCTTCGGCGGGTTTAAA‑CT‑TTTTGAGTGCGAGAAATAACAATCAGAGGCCCCGACACTAACCACAACAGAAACCAGCATATCGCTAAGtatataaagatgaaac > 8:974444/1‑135 (MQ=2) gcagccgatctgcGGTCCGTTTCACCTGTTTTACGGAAAAACCCGGTTCGGGGTTTTTTTC‑GT‑TTTGGAGGGGCATAAAGATCAATCACTGTCCACGACCCTATACCCAAAAGAAATCGGCTTATCGGTCAGTTTTACCTGATGTACGtaa < 3:1492349/139‑1 (MQ=255) aagCGGCTTAT‑CGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTTTA‑CT‑TTTGGAGGGGCAGAAAGATGAATGACAGTCCACGACACTATACACAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGTACGtaat > 6:678480/1‑151 (MQ=255) cGGCTTAT‑CGGTCAGTTTAACCTGATTTACGTAAAAACCCGCTTCGGCGGGTTTTTA‑CT‑TTTGGAGTGGCAGAAAGATGAAAGACTGTCCACCACACTATAAACAAAAGAAAGCGGCATATCGCACAGTTATACATGATGAACCtaat > 4:950409/1‑148 (MQ=11) ggCTTAT‑CGGTCAGTTTCACCTGTTTTATGTAAAAACCCGCTTCGGCGGGTTTTTA‑CT‑TTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGTACGTAATAAAc > 6:1525961/1‑151 (MQ=255) ggCTTAT‑CGGTCAGTTTCACCTGTTTTACGTAAAAAACCGCTTCGGCGGGTTTTTA‑CT‑TTTGGAGGGGCAGAAAGAAGAATGACTGTCCACGACACTATACCAAAAAGAAAGCGGCTTATCGCTCAGTTTTACCTGATGTACGTAATAAAc > 4:1117204/1‑151 (MQ=255) ggCTTAT‑CGGTCAGTTTAACCTGTTTTACGTAAAAACACGGTGCGGCGGGTGTTTA‑CT‑TTTGGAGGGGCAGAAAGAAGAATGACTGTCCACGAGACAATACAAAAAATAAATACTATTATAGGTCAGTATTACCTTATGAACGAAATAAAc > 1:1259014/1‑151 (MQ=9) cTTAT‑CGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTTTA‑CT‑TTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGTACGTAATAAACCg > 5:635715/1‑151 (MQ=255) cTTAT‑CGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTTTA‑CT‑TTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGTACGTAATAAACCg > 4:104949/1‑151 (MQ=255) cTTAT‑CGGTCAGTTTAACCTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTG‑AT‑TTTGGAGGGGCAGAAAGATGAAGCACTGTCCACGACACAATAACAAAAAGAAAGCGGATTATCGGTCATTTTAAAATTTTGTAAGTAATAAAcc > 6:568991/1‑150 (MQ=11) tttttttttCAGTCTCACTTGTTATACGTAAAACCCTGCTTGGGCGTGTTTTTA‑CT‑TTTTGTGGGGTACAAATATTAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGTACGTAATAAAcc < 7:23850/142‑1 (MQ=14) ttAT‑CGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTTTA‑CT‑TTTGGAGGGGCAGAAAGATGATTGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGTACGTAATAAACCGt > 4:767745/1‑151 (MQ=255) attaccttcttgTTTCCCTTGTGCTACGTAAATACATTTTTCTGGGGGTTTTTA‑TT‑TTTTTAGGGGCTTAAAGTTTAATTAATTTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGTACGTAATAAACCg < 8:848587/140‑1 (MQ=9) t‑CGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTTTA‑CT‑TTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGTACGTAATAAACCGTTcc > 8:398907/1‑151 (MQ=255) ggTCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTTTA‑CT‑TTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGTACGTAATAAACCGTTCcgg > 5:1092581/1‑151 (MQ=255) ggTCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTTTA‑CT‑TTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGTACGTAATAAACCGTTCcgg > 6:1567493/1‑151 (MQ=255) tCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTTTA‑CT‑TTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGTACGTAATAAACCGTTCcggcg > 5:1242083/1‑151 (MQ=255) tCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTTTA‑CT‑TTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGTACGTAATAAACCGTTCcggcg > 3:245789/1‑151 (MQ=255) tCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTTTA‑CT‑TTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGTACGTAATAAACCGTTCcggcg > 5:960824/1‑151 (MQ=255) tCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTTTA‑CT‑TTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGTACGTAATAAACCGTTCcggcg > 3:1607171/1‑151 (MQ=255) cAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTTTA‑CT‑TTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGTACGTAATAAACCGTTCcggcgg > 2:582934/1‑151 (MQ=255) cAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTTTA‑CT‑TTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGTACGTAATAAAACGTTCcggcgg > 3:1426126/1‑151 (MQ=255) aGTTTCACCTGATTTACGTAAAAACCCGCTTTTGTGTTTTTTTT‑CT‑TTTGTAGGGGGAGAAATATTAATGACTGCCCACGACTCTATACCAAAAAGATATCGGGTTATCGGTCAGTTTTACCTGATGTACGTAATAAACCGTTCCGGCggg < 2:432537/151‑1 (MQ=14) gTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTTTA‑CT‑TTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGTACGTAATAAACCGTTCCGGCGGGt > 3:1575976/1‑151 (MQ=255) tttCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTTTA‑CT‑TTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGGACGTAATAAACCGTTCCGGCGGGtt > 6:650437/1‑151 (MQ=255) | TATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTGGTTTACGTAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTAT‑CGGTCAGTTTCACCTGTTTTACGTAAAAACCCGCTTCGGCGGGTTTTTA‑CT‑TTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGGTCAGTTTTACCTGATGTACGTAATAAACCGTTCCGGCGGGTTTC > DH1/613623‑613919 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |