Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*DH12,169,5480GT29.3% 375.5 / 72.7 227P671Q (CCG→CAG) rsxCelectron transporter RsxC
Reads supporting (aligned to +/- strand):  ref base G (36/121);  new base T (15/50);  total (54/173)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 232 total aligned reads displayed.

GCGGCAACTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCC‑CGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGC  >  DH1/2169398‑2169699
                                                                                                                                                      |                                                                                                                                                        
gcgGCAACTGCCGCTTTGCGCGGATCAACGTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCg                                                                                                                                                          <  4:1623172/151‑1 (MQ=255)
gcgGCAACTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGGATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCg                                                                                                                                                          <  4:1380173/151‑1 (MQ=255)
 cgGCAACTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGGTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCgg                                                                                                                                                         <  5:774501/151‑1 (MQ=255)
 cgGCAACTGCCGCTTTGCGCGGAGCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCgg                                                                                                                                                         <  7:834621/151‑1 (MQ=255)
     aaCTGCCGCTTTGCGCGGATCAACCTGGTCTTCTGGTACCGCATTAGCCTGTTGCTGTGCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGc                                                                                                                                                     <  2:935551/151‑1 (MQ=255)
          ccGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGCCGCGCGCTTTGAGCCGATCCACCTCGACTTCTGTCTCCGAATTACCCGGTTGCTGTTc                                                                                                                                                >  5:1040637/1‑151 (MQ=17)
              tttGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCC‑CGt                                                                                                                                           >  8:656107/1‑151 (MQ=255)
                tGCGCGGATCAACCTGTTCTTCTGGTACAGCATTAGCCTGTTGCTGTTCAAGCTTGAGAGCTTAGGCGCGTGCAATAGAGGCTTCGACGGCAGATTTGCGCGGATCGACCTGTTGTTCGGTCTGCGGAGAAGCCGGTTGcgctgccggctg                                                                                                                                          >  7:1654722/1‑140 (MQ=2)
                 gcgcGGATCAACCTGTTCTTCTGGTAACGCATTAGCCTCTTGCTGTTCAAGATTGCGAGCTTTTGAGAGTGAAATAGACGATTCGACGTCAGATTAGAAAGGATCAACCTGTTGTTCTGGGAGCGGATTAGCCGCGTGGTGTTCC‑CGTTTg                                                                                                                                        >  8:131231/1‑151 (MQ=12)
                  cgcgGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCATTGCGCGGATCAACCTGTTGGTCTGGATCCTCATTAGCCTGTTGGTGTTAC‑CGTTTg                                                                                                                                        >  7:1570556/1‑150 (MQ=17)
                  cgcgGATCAACCTGTTCTTCTGGTACCGCATTAGACTGTTGCTGTTCCAGATTGCGCGCTTTGGCGCGTGAAATAGCAACATCGACGTCTACTTTAAGACTATCAACCTTTTGTTCTCGATCCGAATTAGCCTGTTgatttaaaaaaata                                                                                                                                         >  8:60432/1‑137 (MQ=9)
                    cgGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCC‑CGTTTgcgc                                                                                                                                     <  5:520816/151‑1 (MQ=255)
                       atgaaCCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCC‑CGTTTGCGCGCt                                                                                                                                  <  6:362184/148‑1 (MQ=255)
                         cAACCTGTTGTTCTGGTACCGCATTAGCCTGTTGCTGGTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCC‑CGTTTGCGCGCttt                                                                                                                                <  8:821332/151‑1 (MQ=255)
                          aaCCTGTTCTTCTGGTACCTCATTAGCCTGTTGCTGTTCCTGCTTTCGTGCTTTGGCGCGTGCAATAGCCGCTTCTACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCC‑CGTTTGCGCGCTTTg                                                                                                                               <  8:417794/151‑1 (MQ=255)
                          aaCCTCGTCTTCTTGCACCGCTTTAGCCTGTTGCTGGGCCAGGTTGCGGGCGTTGGCGCGTGCAATAGCCGCTGCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCC‑CGTTTGCGCGCTTTg                                                                                                                               <  6:74450/151‑1 (MQ=21)
                              tcttcttcTGGTACGTCATTATCCTGTTGCTGTTCCAGCTTGCGTGCTTTCGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCC‑CGTTTGCGCGCTTTGGCt                                                                                                                            <  6:505153/148‑1 (MQ=255)
                              tGTTCTTCTGGTACCGCATTAGCCTGCTGCTGTTCCAGCTTGCGAGCTTTGGCGCGTGCAATAGCCGCTTCGCCGGACGCTTTGCCAGGATGCACCTGTAGGTCTGGCTAATCATTAGCGGTTTGTTCTTAA‑AGATTGCGCGCTTTGGcgg                                                                                                                           >  1:1404647/1‑149 (MQ=255)
                               gTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCC‑CGTTTGCGCGCTTTGGCt                                                                                                                            <  1:1240427/149‑1 (MQ=255)
                                ttcttcTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGACGCATTGAGAGCAGCACGCTGAACTACAGGCTCCGGATTAGCGCTTTTCTGTTCC‑CTTTTgcttgatattcatagg                                                                                                                         >  3:74637/1‑137 (MQ=9)
                                   ttctGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCATCTTAACAGGCCCCTTATCCCGTATCGACAGCTTCTTCTGGCTCCGATGGAGCCTGTTGCTGTTAA‑AGATTGCGGGCTTTGGCGCGGGcc                                                                                                                      >  5:1438835/1‑150 (MQ=2)
                                    tctGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCGGCTTCGACCGCTCGTTAGCGCGGATGTCGGAGGTCTAGTCGCGGCGCATTAGCGGGTTGCTGTTCA‑AGTTTGCGCCATTAAGCTCGGGcgc                                                                                                                     >  3:134382/1‑149 (MQ=9)
                                    tctGGTACCGCATTAGCCTGGTGCTGTTCCAGCTTGCGTGCGTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCC‑CGTTTGCGCGCTTTGGCTCGGGCa                                                                                                                      <  5:18455/150‑1 (MQ=255)
                                    tctGGCTCCGCAATACCCTGCTGCTGTTCCTGCTTGCGTGCTTTCGCGCGTGCAATAGCCGCTTCCACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCC‑CGTTTGCGCGCTTTGGCTCGGGCa                                                                                                                      <  6:825863/150‑1 (MQ=25)
                                       gggtccgatttAGCCTTTTGCTGTTCCTGATTTGTTGCTTTCGCGCGTGCAATAGCCGCTGCTACGGCAGCTTTGCGAGGATCAACCTTTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCC‑CGTTTGCGGGCTTTGGCTCGGGCaa                                                                                                                     <  2:211757/139‑1 (MQ=255)
                                       ggTACCGCATTAGCCTGTTGCTGGTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCC‑CGTTTGCGCGCTTTGGCTCGGGCAATa                                                                                                                   <  7:1354/150‑1 (MQ=255)
                                          aCCGCATTAGCCTGTTGCTGGTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCC‑CGTTTGCGCGCTTTGGCTCGGGCAATAGCgg                                                                                                               <  7:960928/151‑1 (MQ=255)
                                             gCATTAGCCTGTTGCTGTTCGAGCTTGCGTGCTTTTGCGCGTGCAATAGCCGCTTCTACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCC‑CGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCtt                                                                                                            <  6:1611676/151‑1 (MQ=255)
                                             gCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGGGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCC‑CGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCtt                                                                                                            <  2:1587335/151‑1 (MQ=255)
                                             gCATTAGCCTGTTGCTGCTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTGCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCC‑CGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCtt                                                                                                            <  2:1105936/151‑1 (MQ=255)
                                               aTTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCC‑CGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCg                                                                                                          <  5:1524331/151‑1 (MQ=255)
                                               aTTAGCCTGTTGCTGTTCCAGCTTGCGTGCGTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCC‑CGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCg                                                                                                          <  3:229007/151‑1 (MQ=255)
                                                 gaGCGTGGTGCTGGTCCCGCTAGCGGCCTCTGGGGCGCTGACTAGCGGCTTCCACTGCCGCTTTGCGCGGATCCACCTGTTCTTCTGGTTCCGCATTAGCCTGTTGCTGTTCC‑AGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGAc                                                                                                        <  1:76439/150‑1 (MQ=14)
                                                  atccTGTTGCTGTTCCAGCTTTGGTGCTTTGGCGCGTGCAATAGCCGCTTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCC‑CGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAc                                                                                                        <  2:1008262/148‑1 (MQ=255)
                                                  aGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCC‑CGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAcg                                                                                                       <  7:287910/151‑1 (MQ=255)
                                                  aGCCTGTTGCTGTTCCAGCTTGCGGGCGTTGGCGCGTGCAATAGCCGCGTCGACGGCAGCTTTGCGCGGATCAACCTGTGCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCC‑CGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAcg                                                                                                       <  6:1413515/151‑1 (MQ=255)
                                                  aGCCTGGTGCTGTGCCCGCTTGCGTGCGTTGGCGCGTGCAATAGCCGCTGCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCC‑CGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAcg                                                                                                       <  3:579900/151‑1 (MQ=255)
                                                     cTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCGGCTTCGACGGCAGCTTTGCGCGGATCAGCCTGGTGTTCTGGGTCCGGATTAGACTGTTGATGTTCA‑CGCTTCCGAGCTTTTGCCCCGGCAATAGCTGCGTCAAcggcg                                                                                                    >  1:369540/1‑151 (MQ=11)
                                                       gTTGCTGTTCCAGCTTGCTTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCC‑CGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAcggcg                                                                                                    <  4:833958/149‑1 (MQ=255)
                                                       gTTGCTGGTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCC‑CGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAcggcg                                                                                                    <  2:37515/149‑1 (MQ=255)
                                                          gCTGTTCGAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCC‑CGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCtt                                                                                                <  7:562744/150‑1 (MQ=255)
                                                          gCTGTGCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTGCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCC‑CGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCttt                                                                                               <  3:1258641/151‑1 (MQ=255)
                                                           gtGTTCGAGGTTGCGTGCTTTGGCGCGGGCAATAGGCGCTTCTACTGCAGCTTTGCGCGGATCAAGCTGTTCTTCTCGCTCCGCATTAGCCGGTTGCTGTTCC‑CGTTTGCGCGCTTTGGCTCGGGCAATAGCGGGTTCGACGGCGGCTTTg                                                                                              <  4:652802/150‑1 (MQ=255)
                                                             gtgccAGCTTGCGGGCGTGGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCC‑CGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTgc                                                                                             <  4:498055/147‑1 (MQ=255)
                                                               gcgaccTTGCGGGCGTGCGCGCGTGCAATAGCCGCGGCTACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCC‑CGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGcgcg                                                                                          <  2:690450/146‑1 (MQ=17)
                                                               gcccgCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCC‑CGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGcgcg                                                                                          <  2:1035768/147‑1 (MQ=255)
                                                                  aGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCACCGTGTTATTCTGGCACCCAATTATCCTGTAGCTGTACC‑CGATTGCGGGGTGTGGCTCGGGCTATAGCTGATTAAACGGCGGGTTTGCGGGGAt                                                                                       >  5:1348660/1‑151 (MQ=255)
                                                                   gCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGATTTGCGCGGATCAACATGTTGTTCTGGGTAAGCATTAGCAGGTTGCTGTTCC‑AGATTGAGCGCTTTGGCACGGGCCATAGCGGCTTCTACGGCAGATTTACGAGGATc                                                                                      >  8:1577717/1‑151 (MQ=255)
                                                                   gCTTGCGGGCGTGGGCGCGGGCAATAGCCGCTGCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCC‑CGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACAGCGGCTTTGCGCGGATc                                                                                      <  7:1632979/151‑1 (MQ=18)
                                                                      tGCGCGCCTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCC‑CGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGa                                                                                    <  8:1370481/150‑1 (MQ=255)
                                                                        ggTGCGTTCGCGCGTGCAATAGCCGCTTCGACGGCTGCTTTGCGCTGATGAACCTGTTGTTCTGGCTCCGCATTAGCCGGTTGCTGTTCC‑GGTTTGCGCGCGTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCt                                                                                 <  3:1291902/150‑1 (MQ=17)
                                                                        cGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGGGGATCACCCTGTTGTTCTGGGTCCGGATTATCCTGTTGGTGTTCC‑AGTTTGCGCGCTTTGTCGCGGGCAATAGAGGCTTCAACGGCCGTTTTACGTGGATCCAcat                                                                                 >  1:1489801/1‑149 (MQ=255)
                                                                           gccgtGGCGCGGGCAATCGCCGCGTCCACGGCCGCTTTGCGCTGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCC‑CGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCtgtt                                                                              <  2:1251897/147‑1 (MQ=14)
                                                                            gctgcgcgcGGGCAATAGCCGCTGCGACTGCTGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCC‑CGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCtgttg                                                                             <  8:203212/146‑1 (MQ=14)
                                                                            cTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCGACCTGTTCTTCTGGGTCAGCTGTGGCGAGTTGCGGTGGC‑AGCTGGCGGCCGGTGGATCGGGCTATAGGGGCGTCGACGGCGGGTTTGAGCGGATCgccgtggtg                                                                             >  7:724939/1‑143 (MQ=2)
                                                                             gttGGCGCGGGCACTAGCCGCGTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCC‑CGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCtgttgt                                                                            <  3:1410798/150‑1 (MQ=14)
                                                                               tGGAGCGGGCAATCGCCGCTGCTTCGGGAGATTTGAGGTGATCCAGCTGTTCTTCTGCGGGCGGATGAGCCTTCTGCTGTGCC‑CCTTTTTTCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTgttgtt                                                                           <  1:465830/150‑1 (MQ=2)
                                                                                ggCGCGGGCAATAGCCGCGGCGACGGCCGCTTTGCGCGGATCCACCTGGTCTTCGGGCTCCGCATTAGCCGGGTGCTGTTCC‑CGTTTGCGGGCTTTCGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCt                                                                         <  1:240392/151‑1 (MQ=14)
                                                                                 gcgcGTGCAATCGCCGCTGCTACTGCAGCTATCCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGGTCC‑CGTTTTCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTg                                                                        <  2:54884/151‑1 (MQ=17)
                                                                                 gcgcGTCGAACAGCCGCGGCGTCGGCAGCTGTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCC‑CGTTTGCGCGCTTTGGCTCGGGGAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTg                                                                        <  7:131224/151‑1 (MQ=14)
                                                                                    cgTGCAATAGCCGCGTCGACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCC‑CGTTTGCGGGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCt                                                                     <  3:1042460/151‑1 (MQ=255)
                                                                                     gTGCAATAGCCGCTTCGACGGCAGCTCTTCGCGTAGCAACCTGGTCTTCTGGCTCCTCATTAGCCGGTTGCTGTTCC‑CGTTTTCTCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTc                                                                    <  7:926352/151‑1 (MQ=17)
                                                                                       gCAATAGCCGCTTCGACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCC‑CGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCg                                                                   <  1:809109/150‑1 (MQ=255)
                                                                                       gCAATAGCCGCGGCGACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCC‑CGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCgg                                                                  <  3:1002356/151‑1 (MQ=255)
                                                                                         aaTAGCCGCTTCGACGGCAGCTTTGCGCGGATCACCCTGTTGTTCTGGCTCCGCATTAGCCGGTTGCTGTTCC‑CGGTTGCGCGCTTTGGCGCGGGCTATAGCGGCTTCGACGGCGGATTTGCGTGGATCGGCCTGGGGTGCTGGCTCGGcg                                                                >  7:302921/1‑150 (MQ=17)
                                                                                          aTAGCCGCGTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTTGCTCCTCATTAGCCTGTTTCTGTTCC‑CTTTTGCGATCTTTGGCTCTTGCAATAGCCGCTTCGACGGCTGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCAt                                                               <  6:1338760/151‑1 (MQ=14)
                                                                                          aTAGCCGCGTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCC‑CGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCAt                                                               <  5:1669793/151‑1 (MQ=255)
                                                                                          aTAGCCGCGGCGACGGCCGCGTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATGAGCCGGTTGCTGTTCC‑CGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCAt                                                               <  3:914387/151‑1 (MQ=17)
                                                                                            cgCCGCTGCCACGGCCGCGTTGCGCGGATCAACCTGCTCTTCGGGCTCCGCATTAGCCGGCTGCTGGTCC‑CGTTTGCGCGCTGTCGCGCGGGCAATAGCGGCGGCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTa                                                             <  2:74070/150‑1 (MQ=17)
                                                                                             gcatcgtcttctggaGCTTTGGTCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCC‑CGTTTGCGGGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTa                                                             <  8:827564/136‑1 (MQ=14)
                                                                                               ggctgcttctgctgCTTTGCGCGGAGCTACCTGTTCTTCTGGCTCCGCTTTAGCCGGTTGCTGTTCC‑CGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCTGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGcc                                                          <  4:1240414/138‑1 (MQ=14)
                                                                                                gctgctaCGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGTTCCGCATTAGCCTGTTGCTGTTCG‑CGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCt                                                         <  8:110634/145‑1 (MQ=14)
                                                                                                gcggcGACGGCCGCGTTGCGCGGAGCCACCTGTTCTTCTGGCTCCGCTTTAGCCTGTTGCTGTTCG‑CGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCt                                                         <  3:865913/147‑1 (MQ=14)
                                                                                                     gACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCC‑CGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGc                                                    <  7:652422/151‑1 (MQ=255)
                                                                                                      actgccgCTTTGCGCGGATCTACGTGTTCTTATGCCTCGGCTTTAGCCTGCTGCTGTTCG‑CGTTTGCTGGCTTGGGCGCGGGCAATAGCGGCTGCGACTGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCt                                                   <  6:1086603/145‑1 (MQ=14)
                                                                                                      acagccgcgttGCGCGGAGCAACCTCGTCTTCTGCCACCTCATTAGCCTGCTGCTGGTCC‑CGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGc                                                    <  6:219756/141‑1 (MQ=14)
                                                                                                      aCGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCC‑CGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCAACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGc                                                    <  5:357109/150‑1 (MQ=255)
                                                                                                        ggCAGCGCTGCGCGGATCAACCTGTTCTTCGGGCTCCGCATTAGCCTGGTGCTGTTCC‑CGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGt                                                 <  6:644041/151‑1 (MQ=255)
                                                                                                             cTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTAC‑CGTTTGAGCGCTTTGGCTCGGGCAATAGAGGCTTCGACGGCGGCTTTGAGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTcc                                              >  7:661226/1‑149 (MQ=255)
                                                                                                              tttGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCC‑CGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACTGGGGATTTGCGCGGGTAGAGCTGTTGTTCTGGGTCGGCATTAGCGTGTTGGTGTTCCAgg                                           >  4:541629/1‑150 (MQ=18)
                                                                                                                 gcgagtaTCAACCATTTCTTCTGTGTCTTCATTAGCCGGTAGCTGTTCC‑GTTTTGTTGGCCTTCGCTCGGGCAATAGCGGCGTCTACTGCGGCTTTGCGCGGATCCACCTGTTGTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCtt                                         <  8:1438610/144‑1 (MQ=2)
                                                                                                                 ccgaggATCAACCTGAGCTTCTGCCTCCTCAGTACCCGGTGGCTCTTCC‑GGTCTGCGTGCTTTGGCTCGTGCAATAGCGGCTTCGACGGCTGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTg                                        <  6:103366/147‑1 (MQ=14)
                                                                                                                  ggcgGATCATCCTTGTGTTATTGCTCGGGATGAGCCTGTTGCTGGTCG‑CGTTTGGTGGCTTTTGCGCGGGCAATAGCGGCTTCTACGGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCAGCATTAGCCTGTTGCTGTTCCAGCTTGc                                       <  7:1140365/150‑1 (MQ=2)
                                                                                                                    cgGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCC‑CGTTTGCGCGCTTTGGCTCGGGCAATAGCTGCTTCGACGGCGGCTTTCCGACGATCCACCTGCTGTTCTGGATCCCCATTAGCCTCTTGCTTTTCCAGCTTGCgg                                     >  3:361816/1‑150 (MQ=18)
                                                                                                                     gtatttaCCTGTTGTTATTGCTCCGCTTTAGCCGTGTGCTGTTCCGCTTTTGTG‑GCTTGTGCGCGGGCAATAGCGGCTGCTACTGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGt                                     <  4:587476/144‑1 (MQ=9)
                                                                                                                     ggATCAACCTGTTCTTCTGGCTCGGCATTAGCCGGGTGCTGTTCG‑CGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCGGCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTg                                    <  8:154921/151‑1 (MQ=255)
                                                                                                                     ggATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCC‑CGATTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGAc                                                                                                        >  6:973448/1‑83 (MQ=255)
                                                                                                                      gATCAACCTCGACTTATTGCTCCTCATCAGCCTGGTGCTGTTCG‑GGTTTTCTCGCGTGCGCGCGGGCAATAGCGGCTTCTACTGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCg                                      <  1:672307/148‑1 (MQ=2)
                                                                                                                        tCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCC‑CGTTTGCGCGCTTTGGCTCGGGGAATAGCGGCTGACCCCTCCGCTCGGCGCCGCTCGACCTCTTGGTGTGGCGCGGCATTAGCGTATTCATGTTCCAGCTTGCgggggt                                 >  7:414128/1‑146 (MQ=255)
                                                                                                                         cAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCC‑CGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGATTTGATCGGATCGACCTGTTGTTCTGGATCAGCATTAGACTGTTGCTTTTACAGCTTGCGAGCttt                                >  8:84565/1‑151 (MQ=14)
                                                                                                                          aaCGTGCTCTTCTGGCTCGGCATTACCCTGCTGCTGTGCG‑GGTTTGTGGGCGTTCGCGCGGGCAATAGCGGCTGCCACTGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTg                               <  1:1157496/151‑1 (MQ=14)
                                                                                                                           aCCTGGTCTTCTGGCTCCGGTTAACCCTGGTGCTGTGCC‑GGTTTTCTCGCTTTCGCGCGGGCAATAGCCGCGTCGACGGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCCGTTCCAGCTTGCGTGCTTTgg                              <  3:325234/151‑1 (MQ=14)
                                                                                                                            cctcgtcttctGGGATCTCATTAGCCTTCTGCTGTTCC‑CCTTTGCTGGCCTTGGCGCGGGCAATAGCGGCGTCTACTGCCGCTTTGCGCGGATCCACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGc                             <  8:1419375/146‑1 (MQ=14)
                                                                                                                                gtctgcgggggccGCATCAGCCCGGTGCTGGGCC‑CGCTTGCGGGGTTTTTCTCTCTCAAAACCGCCTGCTACGGCGGCTTTGGGCGGTTCGAGCTGTTGTTCCGGCTCGTCATTCGCCTTTTGCTGTTCCAGCTTGCGTGCTTTGGCACgg                         <  3:699908/140‑1 (MQ=255)
                                                                                                                                   ttattgCTCCGAATTAGCCTGTTGCTGGTCC‑CGTTTGGTCGCTTTCGCGCGGGCAATAGCCGCGTCTACTGCGGCTTTGCGCGGATCTACCTGTTCTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGc                       <  3:97281/145‑1 (MQ=14)
                                                                                                                                       ggCCCCGCATTAGCCTTTTTCTTTTGC‑TGCTTGCTCGCTTTCGATCTTGCAATAGCGGCTTCGTCTTCGGCTTTTCGAGGATCTTCCTTTTTTTCTGGTTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATa                   <  6:1437971/150‑1 (MQ=2)
                                                                                                                                        gCTCCGCATTAGCCGGTTGCTGTTCC‑AGGTTGAGCGCTGTGGCTCGCGCGAGAGCGCAGTCGACGGCGGCTTTTCGCGGGTAGACCGGTTGTTGTGGGTAAGAATTAGCCTGTTGCTGTTCCCGCTTGCGGGCGGTGGCGCGGGcgggggg                 >  7:1057929/1‑145 (MQ=255)
                                                                                                                                           ccGCATGAGCCGGGCGCTGCCCC‑CCTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGc              <  1:1059413/151‑1 (MQ=14)
                                                                                                                                            cGCATTAGCCGGTTGCTGTTCC‑CGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAAGGCGGCTTTGCGCGGATCGACCTGTTGTTATGGATCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGAGCTTTGGCGCGGGCGATAGCGGCt             >  1:1117265/1‑151 (MQ=14)
                                                                                                                                                  aGCCGGTTGCTGTTCC‑TGTTTGCGTGCTTTCGCTCGGGCAATAGCGGCTTCTACGGCCGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGAc        <  8:1184060/150‑1 (MQ=14)
                                                                                                                                                      |                                                                                                                                                        
GCGGCAACTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCC‑CGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGC  >  DH1/2169398‑2169699

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑