Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*DH12,169,5770TG29.9% 224.8 / 73.2 217R661R (CGA→CGC) rsxCelectron transporter RsxC
Reads supporting (aligned to +/- strand):  ref base T (33/115);  new base G (7/56);  total (45/172)
Fisher's exact test for biased strand distribution p-value = 8.28e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 220 total aligned reads displayed.

GTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTCTTCTGG  >  DH1/2169429‑2169726
                                                                                                                                                    |                                                                                                                                                     
gatcttctGGTTCCTGATTAGCGTGCTGCTGGTCGAGCTTGGTTGCTTTGGCGCGTGCAATAGCCGCTGCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTc                                                                                                                                                      <  2:1162471/148‑1 (MQ=21)
gTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCt                                                                                                                                                       <  1:1240427/149‑1 (MQ=255)
gTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTc                                                                                                                                                      <  1:1602201/150‑1 (MQ=255)
cgtcttctGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGGGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCg                                                                                                                                                     <  7:191704/149‑1 (MQ=255)
    ttctGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCATCTTAACAGGCCCCTTATCCCGTATCGACAGCTTCTTCTGGCTCCGATGGAGCCTGTTGCTGTTAAAGATTGCGGGCTTTGGCGCGGGcc                                                                                                                                                 >  5:1438835/1‑150 (MQ=2)
     tctGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGc                                                                                                                                                  <  7:656699/149‑1 (MQ=255)
     tctGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTAGACCGCAGCATTGCGCGGCTCAACCTCTTGTACTGGATCCGCATTAGGAGGTTGCGGTTCCCGTTTGCGAGCTTTGGCGCGGGCa                                                                                                                                                 >  7:625291/1‑150 (MQ=17)
     tctGGTACCGCATTAGCCTGGTGCTGTTCCAGCTTGCGTGCGTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCa                                                                                                                                                 <  5:18455/150‑1 (MQ=255)
     tctGGCTCCGCAATACCCTGCTGCTGTTCCTGCTTGCGTGCTTTCGCGCGTGCAATAGCCGCTTCCACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCa                                                                                                                                                 <  6:825863/150‑1 (MQ=25)
        ggTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCGTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATa                                                                                                                                              <  7:49290/150‑1 (MQ=255)
         gttcggCATTAGCCTGTTGCTGTTCCTGGTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCTACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAg                                                                                                                                             <  6:1167784/145‑1 (MQ=255)
         gTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGc                                                                                                                                            <  3:832566/151‑1 (MQ=255)
          gcgcgccctAGCCTGGTGCTGTGCCCGCGTGCGGGCGTTGGCGCGGGCAATAGCCGCGGCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCGGGATTAGCCGGTTGGCGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCg                                                                                                                                           <  2:1535515/143‑1 (MQ=18)
           aCCGCATTAGCCTGTTGCTGGTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCgg                                                                                                                                          <  7:960928/151‑1 (MQ=255)
           aCCGCATGAGCCTGTTGCTGTTCCAGCTTGCGTGCTTGGGCGCGGGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCgg                                                                                                                                          <  7:1547221/151‑1 (MQ=255)
             cGCATTAGCCTGGTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCGTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCt                                                                                                                                        <  8:437154/151‑1 (MQ=255)
              ggaTTAGCCTGTTGCTGGTCGAGGTTGCGTGCTTGGGCGCGTGCAATAGCCGCTTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCtt                                                                                                                                       <  6:1370573/149‑1 (MQ=25)
              gCATTAGCCTGTTGCTGTTCGAGCTTGCGTGCTTTTGCGCGTGCAATAGCCGCTTCTACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCtt                                                                                                                                       <  6:1611676/151‑1 (MQ=255)
              gCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGGGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCtt                                                                                                                                       <  2:1587335/151‑1 (MQ=255)
               cATTAGCCTGTTGCTGTTCCAGCTTGCGGGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTc                                                                                                                                      <  1:721764/151‑1 (MQ=255)
                aTTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCg                                                                                                                                     <  5:1524331/151‑1 (MQ=255)
                aTTAGCCTGTTGCTGTTCCAGCTTGCGTGCGTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCg                                                                                                                                     <  7:801739/151‑1 (MQ=255)
                  aacccTGGTGCTGTGCCCGCTTGCGTGCGTTCGCGCGGGCAATAGCCGCTGCCACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAc                                                                                                                                   <  2:845536/148‑1 (MQ=17)
                     cgtGTTGCTGTTGGTGTTTTTGTGGTTTGGCGCGTGCAATAGGCGGTTCTAGTGCAGCTTTGCGCGGATCATGCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAcgg                                                                                                                                 <  6:1058488/148‑1 (MQ=17)
                      cTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCGGCTTCGACGGCAGCTTTGCGCGGATCAGCCTGGTGTTCTGGGTCCGGATTAGACTGTTGATGTTCACGCTTCCGAGCTTTTGCCCCGGCAATAGCTGCGTCAAcggcg                                                                                                                               >  1:369540/1‑151 (MQ=11)
                       tGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGCCGAAAGCTTTGCGCGGATCAAACTGTTGTTCTGGATCGGCATTAGCCGGTTGGTGTTCCAGATTTATAGCTTTGGCTCGGGCAATAGCGGCTGCGGgggcgg                                                                                                                              >  4:411746/1‑151 (MQ=14)
                        gTTGCTGGTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAcggcg                                                                                                                               <  2:37515/149‑1 (MQ=255)
                           gCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCttt                                                                                                                          <  5:761162/151‑1 (MQ=255)
                           gCTGTGCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTGCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCttt                                                                                                                          <  3:1258641/151‑1 (MQ=255)
                             tGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCGGCTATCCGACGATCACCCTGGTGTTCTGCATACGCATTACCCTGTTGCTTTTCCCGTATGCGCCGTTTGGCACGCGCAATAGCGGCTTCGACggcggcggtgg                                                                                                                        >  7:871000/1‑146 (MQ=2)
                              ggtcgtgCTTGTGTGCTTTGGCGCGTGCAATAGCCGCGGCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTg                                                                                                                         <  4:608869/143‑1 (MQ=255)
                                tcgtgcttgcttgcttTTGCGCGTGCAATAGCCGCTTCGACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTgcgc                                                                                                                      <  2:1011720/146‑1 (MQ=255)
                                gcgaccTTGCGGGCGTGCGCGCGTGCAATAGCCGCGGCTACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGcgcg                                                                                                                     <  2:690450/146‑1 (MQ=17)
                                 ccAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCACCCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCAGTTTGCGCGCTTTGGCTCGGGCCATAGCGGCTTCCACGGCTGATTTGCGCgg                                                                                                                    >  7:351282/1‑151 (MQ=14)
                                   aGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCACCGTGTTATTCTGGCACCCAATTATCCTGTAGCTGTACCCGATTGCGGGGTGTGGCTCGGGCTATAGCTGATTAAACGGCGGGTTTGCGGGGAt                                                                                                                  >  5:1348660/1‑151 (MQ=255)
                                   aGCTTGCGGGCGTGGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGGAATAGCGGCTTCGACGGCGGCTTTGCGCGGAt                                                                                                                  <  1:1307383/151‑1 (MQ=255)
                                    gCTTGCGGGCGTGGGCGCGGGCAATAGCCGCTGCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACAGCGGCTTTGCGCGGATc                                                                                                                 <  7:1632979/151‑1 (MQ=18)
                                    ccTTGCTGGCCTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGa                                                                                                                   <  1:955420/148‑1 (MQ=255)
                                      ttGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCAGATTGCGAGCTTTGGCTCGGGCAATAGCGGCTTCGCcggcgggggtggggggctgg                                                                                                                >  2:1061281/1‑136 (MQ=14)
                                         ggTGCGTTCGCGCGTGCAATAGCCGCTTCGACGGCTGCTTTGCGCTGATGAACCTGTTGTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCGGTTTGCGCGCGTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCt                                                                                                            <  3:1291902/150‑1 (MQ=17)
                                            gCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGGGGATCACCCTGTTGTTCTGGCTCCGCATTAGCCTGTTGGTGTTCCGGTTTCCGAGGTTTGGCGCGGGCCATAGCTGCTTCCACGGCTGAGTTGCGGCGATCggcatggg                                                                                                         >  1:783575/1‑144 (MQ=255)
                                             cTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCGACCTGTTCTTCTGGGTCAGCTGTGGCGAGTTGCGGTGGCAGCTGGCGGCCGGTGGATCGGGCTATAGGGGCGTCGACGGCGGGTTTGAGCGGATCgccgtggtg                                                                                                        >  7:724939/1‑143 (MQ=2)
                                               ggtgcgcGTGCAATAGCCGCGGCCACTGCAGCTTTGCGCGGATCAACCTGGTCTTCTGGCTCCGCATTAGCCGGGTGCTGTTCCCGTTTGCGCGCGTTCGCGCGGGCAATAGCGGCTGCGACGGCGGCTTTGCGCGGATCGACCTgttgtt                                                                                                      <  3:42002/148‑1 (MQ=17)
                                                tGGAGCGGGCAATCGCCGCTGCTTCGGGAGATTTGAGGTGATCCAGCTGTTCTTCTGCGGGCGGATGAGCCTTCTGCTGTGCCCCTTTTTTCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTgttgtt                                                                                                      <  1:465830/150‑1 (MQ=2)
                                                 ggCGCGGGCAATAGCCGCGGCGACGGCCGCTTTGCGCGGATCCACCTGGTCTTCGGGCTCCGCATTAGCCGGGTGCTGTTCCCGTTTGCGGGCTTTCGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCt                                                                                                    <  1:240392/151‑1 (MQ=14)
                                                  gcgcGTGCAATTGCCGCTTCGACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGGTGCTGTTCCCGTTTGGGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTg                                                                                                   <  3:344728/151‑1 (MQ=255)
                                                  gcgcGTGCAATCGCCGCTGCTACTGCAGCTATCCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGGTCCCGTTTTCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTg                                                                                                   <  2:54884/151‑1 (MQ=17)
                                                    ccgggCAATAGCTGCTTCCACGGAGGCGTCGCGAGGAGCGACCTGTTCTGGTGCCTCGAGATTAGCCGGGTGCTGTTCCGTTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTggt                                                                                                 <  7:1077600/147‑2 (MQ=2)
                                                      gTGCAATAGCTTCTTCTAAGGATGCTTTGCGCTGATCGACCTTTTCTTCTGGGTACTCATTTTCCTGTTTCTCGTCTCTTTTGAGCTCTTTGGCTCGTGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGTTc                                                                                               <  8:724641/151‑1 (MQ=2)
                                                           aTAGCCGGTGCTACGGCAGCTGTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGGTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCAt                                                                                          <  3:906965/151‑1 (MQ=17)
                                                             cgCCGCTGCCACGGCCGCGTTGCGCGGATCAACCTGCTCTTCGGGCTCCGCATTAGCCGGCTGCTGGTCCCGTTTGCGCGCTGTCGCGCGGGCAATAGCGGCGGCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTa                                                                                        <  2:74070/150‑1 (MQ=17)
                                                              gcatcgtcttctggaGCTTTGGTCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGGGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTa                                                                                        <  8:827564/136‑1 (MQ=14)
                                                                ggctgcttctgctgCTTTGCGCGGAGCTACCTGTTCTTCTGGCTCCGCTTTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCTGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGcc                                                                                     <  4:1240414/138‑1 (MQ=14)
                                                                cGCTGCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGcc                                                                                     <  3:647701/151‑1 (MQ=255)
                                                                 gctgctaCGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGTTCCGCATTAGCCTGTTGCTGTTCGCGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCt                                                                                    <  8:110634/145‑1 (MQ=14)
                                                                       actgccgCTGTGCGCGGAGCCACCTGTTCTTCTGGCTCCGCATTAGCCTGGTGCTGTGCGCGTTTGCGGGCGTTGGCGCGGGCAATAGCGGCGGCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCt                                                                              <  6:578024/145‑1 (MQ=14)
                                                                       acagccgcgttGCGCGGAGCAACCTCGTCTTCTGCCACCTCATTAGCCTGCTGCTGGTCCCGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGc                                                                               <  6:219756/141‑1 (MQ=14)
                                                                       aCGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCAACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGc                                                                               <  5:357109/150‑1 (MQ=255)
                                                                           gaGCTTTGCGGGGATCCACGTGTTCTTCTGGCTCCGCATTAGCCTGGTGCTGTTCGCGTTTGCTGGCTTTTGCGCGGGCAATAGCCGCTTCCACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTc                                                                          <  5:1069499/150‑1 (MQ=14)
                                                                           cagccgtccgcgGATCAACCTGTTCTTCTGGTCCCGCATTAGCCGGGATCTGTTCCAGCTTGAGGGGTGTGGAGCGGTCAATAGCGGCCTCGACGGCTGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTc                                                                          <  7:1350841/143‑1 (MQ=11)
                                                                               tttGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACTGGGGATTTGCGCGGGTAGAGCTGTTGTTCTGGGTCGGCATTAGCGTGTTGGTGTTCCAgg                                                                      >  4:541629/1‑150 (MQ=18)
                                                                                  gcgcGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCAGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCTGCTTTTCGAGGATCGACCTGTTTTTCTGGATCGGCATTAGCCTGTAGCTGTTCCAGCttt                                                                   >  3:269644/1‑150 (MQ=11)
                                                                                  gcgagtaTCAACCATTTCTTCTGTGTCTTCATTAGCCGGTAGCTGTTCCGTTTTGTTGGCCTTCGCTCGGGCAATAGCGGCGTCTACTGCGGCTTTGCGCGGATCCACCTGTTGTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCtt                                                                    <  8:1438610/144‑1 (MQ=2)
                                                                                  ccgaggATCAACCTGAGCTTCTGCCTCCTCAGTACCCGGTGGCTCTTCCGGTCTGCGTGCTTTGGCTCGTGCAATAGCGGCTTCGACGGCTGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTg                                                                   <  6:103366/147‑1 (MQ=14)
                                                                                   ggcgGATCATCCTTGTGTTATTGCTCGGGATGAGCCTGTTGCTGGTCGCGTTTGGTGGCTTTTGCGCGGGCAATAGCGGCTTCTACGGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCAGCATTAGCCTGTTGCTGTTCCAGCTTGc                                                                  <  7:1140365/150‑1 (MQ=2)
                                                                                     gtgtggaaCCTGGTCTTATGGCTCCGCATTATCCTGTTGCTGGTCGGGTTTTCGGGCGTTTGCTCGGGCAATAGCGGCTTCTACTGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGt                                                                <  6:368683/145‑1 (MQ=14)
                                                                                      ggATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGATTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGAc                                                                                                                                   >  6:973448/1‑83 (MQ=255)
                                                                                          cAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGATTTGATCGGATCGACCTGTTGTTCTGGATCAGCATTAGACTGTTGCTTTTACAGCTTGCGAGCttt                                                           >  8:84565/1‑151 (MQ=14)
                                                                                          cAACCAGCTCTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCCGTTTGGGGGCTTTTGCGCGGGCAATAGCGGCGGCTACGGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCtt                                                            <  8:1364451/150‑1 (MQ=14)
                                                                                           aaCGTGCTCTTCTGGCTCGGCATTACCCTGCTGCTGTGCGGGTTTGTGGGCGTTCGCGCGGGCAATAGCGGCTGCCACTGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTg                                                          <  1:1157496/151‑1 (MQ=14)
                                                                                             cctcgtcttctGGGATCTCATTAGCCTTCTGCTGTTCCCCTTTGCTGGCCTTGGCGCGGGCAATAGCGGCGTCTACTGCCGCTTTGCGCGGATCCACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGc                                                        <  8:1419375/146‑1 (MQ=14)
                                                                                                gatcgtctGGATCAGCATTAGACTGTAGCTGAGACCGGTTGCGATCGTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTCTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCa                                                       <  3:1096537/144‑1 (MQ=11)
                                                                                                cgtcttctGGCTCGTCATGAGCCTGGTGCTGGTCGCGTTTGCTGGCCTGCGCGCGGGCAATAGCGGCTTCTACTGCCGCTTTGCGCGGATCTACCTGTTCTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCAc                                                      <  3:1019943/148‑1 (MQ=11)
                                                                                                    ttattgCTCCGAATTAGCCTGTTGCTGGTCCCGTTTGGTCGCTTTCGCGCGGGCAATAGCCGCGTCTACTGCGGCTTTGCGCGGATCTACCTGTTCTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGc                                                  <  3:97281/145‑1 (MQ=14)
                                                                                                     tctGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCttt                                                                                                                          >  8:1640503/1‑77 (MQ=255)
                                                                                                     tctGGCACCGCATTAGCCTGGTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACggg                                                   <  3:1365832/148‑1 (MQ=255)
                                                                                                       tGGCTCCGCATTAGCCGGTTGCTGTTCCCGGTTGCGCGCTTTGGATCTCGCAAGAGCGCCGTCGACCCCGCCATTCCCCGGAACCACCGGCGGATCTGGGGGGCCAGTAGCAACATGCTGTTCCAGCGTGCGGGCTTTGGCGCggggcggg                                              >  7:301180/1‑146 (MQ=255)
                                                                                                        ggCCCCGCATTAGCCTTTTTCTTTTGCTGCTTGCTCGCTTTCGATCTTGCAATAGCGGCTTCGTCTTCGGCTTTTCGAGGATCTTCCTTTTTTTCTGGTTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATa                                              <  6:1437971/150‑1 (MQ=2)
                                                                                                            ccgcaagaccctggtGCTGGGCCCGTTTGCTCGCCTTGGCGCGGGCAATAGCGTCGTCCACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGc                                         <  1:526716/137‑1 (MQ=14)
                                                                                                            ccGCATGAGCCGGGCGCTGCCCCCCTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGc                                         <  1:1059413/151‑1 (MQ=14)
                                                                                                             cgcttaagccttttGCTGGTCGCGTTTGTTGGCTTTTGCGCGGGCAATAGCCGCTGCGACTGCCGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCt                                        <  4:571657/139‑1 (MQ=14)
                                                                                                             cGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAAGGCGGCTTTGCGCGGATCGACCTGTTGTTATGGATCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGAGCTTTGGCGCGGGCGATAGCGGCt                                        >  1:1117265/1‑151 (MQ=14)
                                                                                                              gCATTAGCCCGTTGCTGTTCCCGTTTGCTTGCTTGGGCTCGGGCAATATCCGCTTCGACGGCCGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCtt                                       <  8:1569280/151‑1 (MQ=14)
                                                                                                                 tgagccttctGCTGTTCGGGTTTGCTGGCCTGCGCGCGGGCAATAGCGGCTTCTACGGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCg                                     <  6:752224/141‑1 (MQ=14)
                                                                                                                   aGCCTGTTGCTGGTCCCGTTTGCGCGCGTGGGCTCGGGCAATAGCGGCTGCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGAcg                                  <  3:187342/151‑1 (MQ=255)
                                                                                                                   aGCCGGTTGCTGTTCCTGTTTGCGTGCTTTCGCTCGGGCAATAGCGGCTTCTACGGCCGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGAc                                   <  8:1184060/150‑1 (MQ=14)
                                                                                                                    gccgttgcgtggtCCCGTTTTGTCGCTTTGGCGCGGGCAATAGCGGCGTCGACTGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGAcgg                                 <  3:753944/139‑1 (MQ=14)
                                                                                                                     tatttttatGTTCCCGCTTGCTCGGTTTTGCTCTGTTAATAGCCGCTTCGTTGCCTGCTTTTCGCTGATCCTATTTTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGAcgg                                 <  4:74779/142‑1 (MQ=2)
                                                                                                                     cctgTTGCTGTTCGGGTTTGCGGGCTTTTGCGCGGGCAATAGCGGCTTCTACTGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGAcggc                                <  8:875262/148‑1 (MQ=14)
                                                                                                                       ggTTCCTGTTGGCG‑TTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCCACGGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGCTGCGCATTAGCCTGTTGCTGTTCCAGCTTGCGGGCTTTGGCACGGGCAATAGCGGCTTCGACggcggc                             <  7:935146/151‑1 (MQ=11)
                                                                                                                           gCTGTTCGGGTTTGTTGGCTTTGGCTCGGGCAATAGCCGCTTCTACTGCTGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCtt                           <  2:1416525/150‑1 (MQ=14)
                                                                                                                             tGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTCCGCGGATCCCCCTCTTGTTCTGGGTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGGGGTTAGGGCCGGGAAATAGCGGCTTCTAcggcagttattc                        >  7:555658/1‑143 (MQ=14)
                                                                                                                              gtgccggTTTGCTGGCGTGGGCGCGGGCAATAGCGGCTTCTACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTgcg                       <  7:274759/145‑1 (MQ=14)
                                                                                                                                gcccgcgtGCGCGCTTGGGCTCGGGCAAGAGCCGCCTCGACCGCTGCCTTGCGCGGATCTACCTGTTGTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGcgcg                     <  5:1646243/144‑1 (MQ=14)
                                                                                                                                    gTTTGCTTGCTTTTGCTCGGGCAATAGCCGCTTCTACTGCTGCTTTGCGCGGATCTACCTGTTCTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCTGCTTGCGTGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATc                 <  4:503088/151‑1 (MQ=11)
                                                                                                                                    gTTTGCGCGCCTTGGCGCGGGCAATAGCCGCTTCGACTGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATc                 <  7:1195956/151‑1 (MQ=255)
                                                                                                                                        gcgcgcTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGAGGATCGACCTGTTGTTCTGGCTCGGCATTAACCTGTTGCTCTTCAAGCTTGCGTGCTTTGGCACGGGCTATAGATTCTTCAACGGCGGGTTTGCGCGGATCggcg             >  8:633061/1‑148 (MQ=14)
                                                                                                                                         gttgcgtgggCTCGGGCAATAGCCGCGGCAACTGCGGCTTTGCGCGGTTCGACCTGGTCTTCTGGCTCGGGATTAGCCTGCTGCTGTTCGCGGTTGCTGGCTTTGGCTCGGGCAATAGCGGCTTCGACTGCGGCTTTGCGCGGATCGACCt            <  7:167971/143‑1 (MQ=2)
                                                                                                                                         cgcgcTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGCCCt            >  1:275289/1‑151 (MQ=255)
                                                                                                                                                 ggCTCTGGCAATAGCCGCTTCCACGGCCGCTTTGCGCTGATCGACCTGTTGTTCTGGAACGGCATTAGCCTGTTGCTGTTCCAGCTTTCGTGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTtcttct    <  5:483160/151‑1 (MQ=14)
                                                                                                                                                    |                                                                                                                                                     
GTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTCTTCTGG  >  DH1/2169429‑2169726

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑