| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | DH1 | 4,137,737 | G→A | intergenic (‑31/+145) | sugE ← / ← ecnB | quaternary ammonium compound‑resistance protein SugE/entericidin B |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | DH1 | 4,137,737 | 0 | G | A | 98.2% | 1915.0 / 11.5 | 504 | intergenic (‑31/+145) | sugE/ecnB | quaternary ammonium compound‑resistance protein SugE/entericidin B |
| Reads supporting (aligned to +/- strand): ref base G (2/7); new base A (259/234); total (262/242) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.48e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.05e-01 | |||||||||||
Only 100 of 504 total aligned reads displayed.
CATCGCCGTCACAGTAATAACACTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGACACAGCTGTCGTACCGTTATTGCTTA > DH1/4137590‑4137884 | gTCACAGTAATAACACTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAag > 4:470743/1‑149 (MQ=255) gTCACAGTAATAACACTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAag > 4:1559990/1‑149 (MQ=255) cacaGTAATAACACTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCCGGCCAACGGCCCATACCACTTCCAGCAGCCCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGc > 4:295010/1‑151 (MQ=255) cacaGTAATAACACTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGc > 4:763051/1‑151 (MQ=255) gTAATAACACTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGttt > 5:705316/1‑151 (MQ=255) taataaCACTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTg > 5:889929/1‑151 (MQ=255) aataaCACTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGc > 2:879884/1‑151 (MQ=255) taaCACTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGc > 8:866374/1‑149 (MQ=255) taaCACTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGc > 3:676434/1‑149 (MQ=255) cacTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGgtc > 7:1335572/1‑151 (MQ=255) cGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGgtcgtn < 7:414628/150‑2 (MQ=255) cGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGgtcgtc < 5:326605/150‑1 (MQ=255) ggCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCt > 3:1398825/1‑151 (MQ=255) ggCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCt > 4:1033656/1‑151 (MQ=255) ggCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCt > 7:1049014/1‑151 (MQ=255) gTCAAACGACTAAAGCCGTGTGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCa < 3:1533702/151‑1 (MQ=255) cAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCaaa < 7:1016862/151‑1 (MQ=255) cAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCaa > 6:1472955/1‑150 (MQ=255) aaCGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGc < 4:654729/151‑1 (MQ=255) aCGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCt < 6:1331462/151‑1 (MQ=255) cGACTAATGGCGTTGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAATATAATCCATGACATATCAGGCTCCGGAGAATTGGGGCCGTGCCCAGTGAAAAGACGCGTTTGCAGGTCGTCCTGCAAAGCTg < 3:1638201/151‑1 (MQ=255) aaGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGtt < 8:114504/151‑1 (MQ=255) aaGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGtt > 1:30520/1‑151 (MQ=255) aaGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGGCGTCCTGCAAAGCTGATGGtt < 7:957934/151‑1 (MQ=255) aGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTg < 5:241916/151‑1 (MQ=255) gCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTg > 3:544550/1‑150 (MQ=255) tataTTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGatat > 4:178954/1‑151 (MQ=255) atatTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATAtt > 1:588121/1‑151 (MQ=255) tatTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATAttt > 6:1196888/1‑151 (MQ=255) ttCAGGCCAACGGCGCATACCAGTTCCAGCAGACCAGCAATACCTAAGATAATCGAGGACATTTCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTg < 5:927938/150‑1 (MQ=255) tCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGcc > 6:385906/1‑151 (MQ=255) cAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGcc < 1:202916/150‑1 (MQ=255) cAGCCCATCGGCCCATAGCACATCCATCAGACGAGCAATAACTAAGATAATCCAGGACATATCAGGCTGCGGAGAATTGGGGCGGTCCCCAGTGAAAAGAGGGGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCa < 2:1403666/151‑1 (MQ=255) aGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGcc > 5:1629413/1‑149 (MQ=255) aGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGcc > 6:174401/1‑149 (MQ=255) gCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGt > 2:1011629/1‑151 (MQ=255) aCGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCa < 1:861955/151‑1 (MQ=255) aCGGCCCAGACCGCTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGCAGTGGGGCCGGCGCCCGTGAAAAGAGGCGTTTGCCGGTCGTCCGGCAGAGCTGATGGTTGAACGGATATTTTGCCAGGTGGc > 2:1253837/1‑150 (MQ=255) cccATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAgggg > 5:806548/1‑151 (MQ=255) ccATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAgggg > 7:711784/1‑150 (MQ=255) cATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGaa < 3:964473/151‑1 (MQ=255) aCCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAAttt < 8:1055499/151‑1 (MQ=255) aCCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAAtt < 5:1211254/150‑1 (MQ=255) ccAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTAt < 5:486411/151‑1 (MQ=255) cagcagACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTAtt < 1:909472/151‑1 (MQ=255) agcagACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTAtt > 6:634730/1‑150 (MQ=255) caCCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCtt < 8:465168/150‑1 (MQ=255) aCCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCttt > 6:953131/1‑151 (MQ=255) ccAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTtg > 3:1257188/1‑151 (MQ=255) cAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTtgt < 2:397041/151‑1 (MQ=255) aGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTtgtg < 5:56365/151‑1 (MQ=255) cAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCGAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGAc < 7:556043/151‑1 (MQ=255) aaTAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACt < 4:1394088/151‑1 (MQ=255) cTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGc > 4:132036/1‑151 (MQ=255) tAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGc > 4:338824/1‑150 (MQ=255) aaGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGc < 5:1387527/149‑1 (MQ=255) aaGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGc < 8:1267533/149‑1 (MQ=255) aGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACt < 1:1090941/128‑1 (MQ=255) aGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACt > 2:1092721/1‑128 (MQ=255) aGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGa < 8:1369528/151‑1 (MQ=255) tAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGaaa > 3:352720/1‑150 (MQ=255) aaTCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGaaaa > 3:805536/1‑150 (MQ=255) tCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGaaaaaa > 6:1543591/1‑150 (MQ=255) ccAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAaaaca < 5:1438839/151‑1 (MQ=255) ccAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAaaaca < 1:76222/151‑1 (MQ=255) cAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAaaaca > 3:1154863/1‑150 (MQ=255) cAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAaaaca > 5:1574060/1‑150 (MQ=255) aGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGGTGAACGGATATTTTTCCAGGTGGCAGGGGAATTTCAACTATTAACTTTGTGACTATCGCAGAAAaaacaa > 7:1521247/1‑150 (MQ=255) cATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGc > 2:655924/1‑151 (MQ=255) cATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGc > 8:344122/1‑151 (MQ=255) cATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGc < 7:1265869/151‑1 (MQ=255) atatCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCa < 5:389664/151‑1 (MQ=255) tatCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTTATGGTTGAACGGATATTTTGCCAGGTGGGAGGGGAATTTCAACTAATACCTTTGTGACTATCGCAGAAAAAACAAACGGCAc > 2:1614184/1‑151 (MQ=255) atCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCAc < 8:714906/150‑1 (MQ=255) atCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACg < 2:795248/151‑1 (MQ=255) atCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGGTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACg > 2:344081/1‑151 (MQ=255) cAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGac < 7:1675599/151‑1 (MQ=255) cAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGa < 4:1205041/150‑1 (MQ=255) gCTCGGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGAcaca < 2:545814/151‑1 (MQ=255) gCTCCGGAGAATTGAGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGacac > 2:15336/1‑150 (MQ=255) cTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGacaccc > 8:1555042/1‑149 (MQ=255) ccGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGACACAGCt > 1:706146/1‑151 (MQ=255) ccGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGACACAGCt < 5:1040466/151‑1 (MQ=255) agaATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGACACAGCTGTCg > 1:1371825/1‑151 (MQ=255) gaATTGGGTCCGTCCCCAGTGAAAAGAGGCGTTTGAAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGACATGTGGCAGGTGAATTTCAAATATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGACACAGCTGTCGt < 1:40107/151‑1 (MQ=255) gaATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGACACAGCTGTCGt < 6:523316/151‑1 (MQ=255) aaTTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCGGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGACACAGCTGTCGt > 1:1015512/1‑150 (MQ=255) aaTTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGACACAGCTGTCGt > 1:1473371/1‑150 (MQ=255) aaTTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGACACAGCTGTCGt > 8:1631946/1‑150 (MQ=255) aTTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGACACAGCTGTCGTAc > 5:613351/1‑151 (MQ=255) gggCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGACACAGCTGTCGTACCGtt < 2:1349927/151‑1 (MQ=255) gggCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGACACAGCTGTCGTACCGtt > 2:1508757/1‑151 (MQ=255) ggCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGACACAGCTGTCGTACCGtta < 1:1280864/151‑1 (MQ=255) gCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGACACAGCTGTCGTACCGttat < 8:568014/151‑1 (MQ=255) ccGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGACACAGCTGTCGTACCGttatt < 6:897426/151‑1 (MQ=255) ccGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGACACAGCTGTCGTACCGttatt < 7:882381/151‑1 (MQ=255) ccGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCACGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGACACCGCTGTCGTACCGtgatt > 3:886552/1‑151 (MQ=255) ccccAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGACACAGCTGTCGTACCGttattgct < 1:542538/150‑1 (MQ=255) ccccAGTGAAAAGAGGCCTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGACACAGCTGTCGTACCGttattgctt > 2:937013/1‑151 (MQ=255) cccAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGACACAGCTGTCGTACCGttattgctt > 7:143398/1‑150 (MQ=255) | CATCGCCGTCACAGTAATAACACTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGACACAGCTGTCGTACCGTTATTGCTTA > DH1/4137590‑4137884 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |