| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | DH1 | 936,169 | 0 | T | . | 31.1% | 179.1 / 84.4 | 76 | intergenic (‑13/+21) | ECDH1_RS04615/ECDH1_RS04620 | tRNA‑Met/tRNA‑Met |
| Reads supporting (aligned to +/- strand): ref base T (3/48); new base . (1/22); total (5/71) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.91e-01 | |||||||||||
GAATGGCGCTTTTTTATGGGAGACCAGAAACAAAAAA‑ACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTACTTCATC > DH1/936019‑936289 | gAATGGCTCTTTTATATTGGAGACCAGAAAAAAAAAA‑ACACCCTTTATGTTGTTCAATTATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCt < 4:1055550/151‑1 (MQ=18)gAATGGCGCTTTTTTATGGGAGACCAGACACAAAAAA‑CCACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGGTATGAGCCCGACGAGCTACCAGGCTGCGCCACCCCGCGTCACCGTACTGCt < 3:624088/151‑1 (MQ=255)gAAAGGCGCTTTTTTATGGGACACCAGAAACAAAAAC‑ACCCCTGTTAGGGTGTTCAATCATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCt < 1:464528/151‑1 (MQ=18) ataggggcTTTTATATGCGAGACCAGAAACAACAAC‑ACACCAGTTTTGGTGTTCAATCATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCt < 7:1531816/144‑1 (MQ=17) aatggttcgtttttATGGGAGACCTGTAACAATAAA‑AGACGCGTTAGGTTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCtt < 4:1208692/142‑1 (MQ=17) aaTGGCGCTTTTTTATGTGATACAAGAAACAAAAAA‑ACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCtt < 2:1093508/151‑1 (MQ=255) aaTGGCGCTTTTTTATGGGAGACCAGAAACAAAAAA‑ACACCCTTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCtt < 4:1112385/151‑1 (MQ=255) aaTGGCGCTTTTTTATGGGAGACCAGAAACAAAAAA‑ACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCtt < 4:859236/151‑1 (MQ=255) aaTGGCGCTTTTTTATGGGAGACCAGAAACAAAAAA‑ACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCtt < 3:932077/151‑1 (MQ=255) aaTGCCTCTTTTTTATGGGAGACCTGAAAAAAAAAA‑TCACCCTTTAGGTTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCtt < 8:1701639/151‑1 (MQ=18) aTGGCGCTTTTTTATGGGAGACCAGAAACAAAAAA‑ACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCttt < 6:161602/151‑1 (MQ=255) aTGGCGCTTTTTTATGGGAGACCAGAAACAAAAAA‑ACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCttt < 8:156827/151‑1 (MQ=255) ggCGCTTTTTTATTGGAGACCAGAAACAAAAAA‑CAACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGTCCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTa < 7:1578273/151‑1 (MQ=255) ggCGCTTTTTTATGGGAGACCAGAAACAAAAAA‑ACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCtttt < 6:697986/150‑1 (MQ=255) ggCGCTTTTTTATGGGAGACCAGAAACAAAAAA‑ACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTa < 8:1629618/151‑1 (MQ=255) ggCGCTTTTTTATGGGACCCCAGAACCAACAAA‑ACCGCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCtttac < 1:1132646/151‑3 (MQ=18) ggcTTTTTTATGGGAGACCAGAAACAAATAA‑ACACCGGTTAGGGTGTTAAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCtttactt < 4:1097970/150‑5 (MQ=255) ggcTTTTTTATGGGAGACCAGAAACAAAAAA‑ACACGCGTTAGGGTGTTCAATAATTGGTTGCGGGTGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACt < 6:1796957/150‑1 (MQ=255) cgcTTTTTTATGGGAGACCAGAAACAAAAAA‑ACAGCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACt < 6:482141/151‑1 (MQ=255) cgcTTTTTTATGGGAGACCAGAAACAAAAAA‑ACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACt < 3:123196/151‑1 (MQ=255) cgcTTTTTTATGGGAGACCAGAAACAAAAAA‑ACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACt < 8:1638235/151‑1 (MQ=255) gcTTTTTTATGGGAGACCAGAAACAAAAAA‑ACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACtt < 2:849019/151‑1 (MQ=255) tttttAT‑GGAGACCAGATAAAAAAAA‑TCACCTTTTTGGTTGATCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTtcat < 4:1690943/149‑1 (MQ=14) ttttATGGGAGACCAGAAACATAAAA‑ACACCCGTTAGCGTGTTCAATAATTGGTAGCGGGGGCCGGATTTGAACCGATCACCTTCGGGTTATGAGCCCGACGAGCTACCAGCCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTtcat < 8:240241/150‑1 (MQ=21) tttATGGGAGACCAGAAACAAAAAA‑ACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTtcatc < 7:1190754/150‑1 (MQ=255) ttATGGGAGACCAGATACAAAAAT‑ACAGCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTAGTtcatca < 8:382501/150‑1 (MQ=255) ttATGGGAGACCAGAAACAAAAAA‑ACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTtcatca < 1:399041/150‑1 (MQ=255) ttAGGGGACCCCAGAAAAAAAAAA‑ACACCCTTTATGGTGTTCAATCATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCaa < 1:1766289/150‑1 (MQ=14) tATGGGAGACCAGAAACAAAAAA‑ACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAAGCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCaa < 6:953090/150‑1 (MQ=255) aTGGGAGACCAGAAACAAAAAA‑ACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCaaa < 3:1689496/150‑1 (MQ=255) aTGGGAGACCAGAAACAAAAAA‑ACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑t < 6:30675/151‑1 (MQ=255) ggggACACCAGAAACCAAAAA‑AGACCCGTTAGGGTGTTCAATAATTGGGTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAA‑ttt < 7:1138254/150‑1 (MQ=17) gggAGCCCAGAACCAAAAAA‑ACCCCCTTTATGTTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAA‑ttt < 6:1593237/150‑1 (MQ=14) gggAGACCTGAAACAAAAAA‑ACACCCTTTATGGTGTTAAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAA‑ttt < 2:1121064/150‑1 (MQ=17) gggAGACCAGCAACACCAAA‑AGACGCTTGTGGGTGTTCATTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAA‑tttt < 3:1417510/151‑2 (MQ=11) gggAGACCAGAAACAAAAAA‑ACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑ttt < 7:1127612/151‑1 (MQ=255) gggAGACCAGAAACAAAAAA‑ACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑ttt < 8:713516/151‑1 (MQ=255) gggAGACCAGAAACAAAAAA‑ACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑tt < 5:1824462/150‑1 (MQ=255) gggAGACCAGAAACAAAAAA‑ACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑tt < 4:156824/150‑1 (MQ=255) gggAGACCAGAAACAAAAAA‑ACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑tt < 4:1005810/150‑1 (MQ=255) gggAGACCAGAAACAAAAAA‑ACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑tt < 8:526952/150‑1 (MQ=255) gggAGACCACATACAACAAC‑ACACCATTATTGTTGTTCTATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAA‑ttt < 3:152059/150‑1 (MQ=11) ggAGACCTGATACAAATAA‑TCAGTCGTTAGGGTGTTCATTTATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAA‑tttta < 2:964206/151‑3 (MQ=11) ggAGACCAGATACAACAAA‑ACACCCTTGAGGGTGTTCAATCATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAA‑tttta < 5:1559831/151‑3 (MQ=14) ggAGACCAGAAACAAAAAA‑ACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTg < 6:1648274/151‑1 (MQ=255) gagaCCAGAAACAAAAAA‑ACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGa < 5:1827631/151‑1 (MQ=255) gagaCCAGAAACAAAAAA‑ACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGa < 4:1334993/151‑1 (MQ=255) gagaCCAGAAACAAAAAA‑ACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGa < 8:1260981/151‑1 (MQ=255) agaCCAGAAACAAAAAA‑ACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAA‑ttttaat < 4:1037075/151‑5 (MQ=255) agaCCACAAACAAAAAA‑ACCCCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAA‑ttttaat < 5:1823693/151‑5 (MQ=255) gaCCAGAAACAAAAAA‑ACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGAtt < 5:1437622/151‑1 (MQ=255) gaCCAGAAACAAAAAA‑ACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGAtt < 6:409811/151‑1 (MQ=255) gaCCAGAAACAAAAAA‑ACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGAtt < 2:806257/151‑1 (MQ=255) cccAGAAACACAAAC‑ACCCGCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAA‑ttttaattg < 5:1265170/150‑7 (MQ=14) cccAGAAACAAAAAA‑ACACCCGTGAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAA‑ttttaattg < 1:777758/150‑7 (MQ=255) accactaccAAAAAC‑ACACCCTGTAGGGTGATCTATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAA‑ttttaattg < 3:1587398/143‑7 (MQ=11) aCCAGAAACAAAAAA‑AGACCCTTTATGTTTTTAAATTATTGGTTGCGGGGGCTGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAA‑ttttaattg < 2:1182817/151‑7 (MQ=11) aCCAGAAACAAAAAA‑AGACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGAtt < 4:694495/150‑1 (MQ=255) aCCAGAAACAAAAAA‑ACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTg < 1:1475602/151‑1 (MQ=255) cctcaaaCAATTAA‑AGCCCCTTTATGTTGTTAAATCATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAA‑ttttaattgg < 2:752856/147‑8 (MQ=11) ccAGAAACAACAAA‑AGAGCCGTTAGGGTGTAAATTAATTGGTTGCGGGGGCCGGATTTGACCCGAGGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAA‑ttttaattgg < 1:1543947/151‑8 (MQ=11) ccAGAAACAAAAAA‑ACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGGCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTgg < 2:1580860/151‑1 (MQ=255) ccAGAAACAAAAAA‑ACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTgg < 8:959248/151‑1 (MQ=255) ccAGAAACAAAAAA‑ACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTgg < 5:1560212/151‑1 (MQ=255) cAGTAACAATTAA‑ACAGCCTTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGAATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAA‑ttttaattggt < 8:1348269/151‑9 (MQ=11) aGAAACAAAAAA‑ACCCCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGtt < 5:1733402/151‑1 (MQ=14) aGAAACAAAAAA‑ACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTGGtt < 5:186787/151‑1 (MQ=255) aGAAACAAAAAA‑ACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTGGtt < 3:837001/151‑1 (MQ=255) aGAAACAAAAAA‑ACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTGGtt < 7:859308/151‑1 (MQ=255) aGAAAAAAAAAC‑ACACAATTTAGCTTGTTCAATCATTGGTTGCGGGTGCAGGATTTGAACCTACCACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGtt < 2:76128/151‑1 (MQ=11) aaaCAAAAAA‑ACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTg < 6:331486/150‑1 (MQ=255) aaaCAAAAAA‑ACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGc < 1:335936/151‑1 (MQ=255) aaaCAAAAAA‑ACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGc < 2:115316/151‑1 (MQ=255) aaaCAAAAAA‑ACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTACGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGc < 1:1741154/151‑1 (MQ=255) aaaCAAAAAA‑ACACCCGTTAGGGTGTTCAATAATTGGTTGCGGCGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGc < 2:1646261/151‑1 (MQ=255) aaCAAAAAACACACCAGTTAGGGTGTTCATTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGATGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGc < 5:806735/151‑1 (MQ=11) aaCAAAAAA‑ACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCg < 8:1029133/151‑1 (MQ=255) aaCAAAAAA‑ACACCCGTTAGGGTGTTCAATAATGGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCg < 6:733140/151‑1 (MQ=255) cAAAAAA‑ACACCCTTTAGGTTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGtt < 8:1841478/146‑1 (MQ=11) cAAAAAA‑ACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATGAAATTTTAATTGGtttgatg > 7:1840477/1‑146 (MQ=14) aaaaaa‑aCACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCgggg < 2:718829/151‑1 (MQ=255) aaaaaa‑aCACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCgggg < 4:892325/151‑1 (MQ=255) aacacacCCGTTAGGGTGTTCAATAATTGGTTGCGTGGGCCGGATTTGCCCCGACGACCTTCGTGTTATCAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGcc < 6:32205/148‑1 (MQ=18) ccGGTAGGGTGTTCAATAATTTGTTCCGGGGGCCGGAGTTGCCCCGACGACCTTCGGGTTATGCGCCCGACGAGCGACCTTGCTTCGCCACCCCGCGTCACAGTACAGCGTCTACTTCATCAAA‑ATTGATTGGTTGCGGGGGCCGGATTTg < 3:512128/151‑1 (MQ=17) gtgtTCAATAATTGTTTGCGGGGGCCGGATTTTACCCGACGACCTTCGCGTTATCAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTTATTGGTTGCGGGGGCCGGATTTGAACcgacg < 7:396720/151‑1 (MQ=14) tCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCttt < 7:748553/100‑1 (MQ=35) tCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCttt > 8:749148/1‑100 (MQ=35) ggTTGCGTGGGGGGGAGTTGTTCGCACGTCCTTCGAGTTATCAGCCCGTCTAGCTTCCAGTCTTCTCCAGCCCTCTTCACATTACTGCTTTTACATCTTGATA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTa < 4:1220891/150‑1 (MQ=9) gccccGACGACCGTCGGGTTATGAGCCCGAAGAGCGACCAGTCTTCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAg < 7:1338390/148‑1 (MQ=14) ttATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGGAGTGCGTTTAGTCAAGCAAA‑TTTTATTGGTTGAGGGGGGCGGATTTGAACCGCCGACCTTAGGGTTATGAGCCAGACGAGCTAGCAGGCTGCTCCACCCCGCGt > 7:1036134/1‑150 (MQ=11) ggCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCCAGTAATGCTTGTATtcatc > 5:1765227/1‑150 (MQ=14) cgTCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGa > 6:1020149/1‑52 (MQ=255) ccGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTccg > 5:1536298/1‑109 (MQ=255) | GAATGGCGCTTTTTTATGGGAGACCAGAAACAAAAAA‑ACACCCGTTAGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTACTTCATC > DH1/936019‑936289 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |