Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | DH1 | 3,906,837 | 0 | C | G | 29.1% | 162.7 / 26.7 | 110 | intergenic (+8/‑27) | ECDH1_RS19315/ECDH1_RS19320 | tRNA‑Leu/tRNA‑Leu |
Reads supporting (aligned to +/- strand): ref base C (59/14); new base G (30/0); total (95/15) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 9.02e-03 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 111 total aligned reads displayed.
GGGGTTCAAGTCCCCCCCCTCGCACCAAAAACCACGTTGATATTGCT‑CGCACTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAATTATCTTTACTTCCTTTCTTGTTTCTTCCTTGATTT > DH1/3906688‑3906987 | ggcccgccactacccccccTCGGAGCTAAAAACTCGTTTATATTGTT‑GAGTGTCGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAACGAGGCg < 3:893298/139‑1 (MQ=14) gcgggcAAGGCCCCCGCCTCGCAGCTAACACGACTTTTTTATTTCT‑CGGTGTAGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAACGAGGCGa < 5:300482/146‑1 (MQ=14) gacccccccTCGCACCAAACACCACGTTTATATTGAT‑CTGACTCTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAACGAGGCGATATCaaaaa < 7:1320905/149‑1 (MQ=18) cccccccTCGCACCAAAAACCAAGTTGATATTTCT‑AGCACTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGTGGGTTAAAATAAACCCCCGCGGACCAAAAGAGGGTATATGaataaat > 8:641491/1‑150 (MQ=18) ccccTCGCACCAAAAACCACGTTGATATTGCT‑CGCACTGGGCGAAGGTGGAGGAATTGGTAGACGAGCTAGCTTCAGGTGTTAGTTTACTTACGGACGTGGGGGGTAAAGTCCCCCCCCACGCACCAAAAGAAGGTATATGAAAAAAAGtt > 2:1678773/1‑150 (MQ=255) cccTCGCACCAAAAACCACGTTGATATTGCT‑CGCACTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTGCTTACGGACGTGGGGGTTCAAGTCCCCCCCCCCGCCCCAAACACGCCTAAATCaataaaactt > 1:1411801/1‑147 (MQ=18) tCGCACCAAAAACCACGTTGATATTGCT‑CGCACTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAAAGAGGGGAAATCCAAAAAAGTa > 3:902703/1‑147 (MQ=255) cGCACCAAAAACCACGTTGATATTGCT‑CGCACTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTGAACTCCCCCCCCGCGCCCCAAAAGAGGGTAAATCaaaaaaatttatatt > 7:593281/1‑143 (MQ=18) gCACCAAAAACCACGTTGATATTGCT‑CGCACTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAATCAGGCTAGATCCAAAAATGTTAGTTgc > 3:871681/1‑150 (MQ=18) ccACCAAACACCACGTTGATAGTCCT‑CCCCCTGGGCGAAGGGGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGGCCCCCCCCTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGa < 8:1517417/150‑1 (MQ=21) cACCAAAAACCACGTTGATATTGCT‑CGCACTGGGCGAAGGTGGCGTAATTCGTAGACGCGCTAGCTTCAGGTGTTAGTCTTATTACGGAAGTGGGGGATAAACAACCCCCCCAAACACCAAAAGAAGCACAATACAAAAAACTAACATGa > 7:44181/1‑150 (MQ=16) cACCAAAAACCACGTTGATATTGCC‑CGCACTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAAAAACGTTAAATCAAATAAAGtttgttta > 6:969639/1‑143 (MQ=17) aCCAAAAACCACGTTGATATTGCT‑CGCACTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAACGACGTTAGATCAAATAATGTATGAtccat > 5:117047/1‑147 (MQ=18) aCCAAAAACCACGTTGATATTGCT‑CGCACTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAAAAACTAAAAATCAATAAAAGTTAGATgcat > 2:328002/1‑148 (MQ=17) ccAAACAACACGTTTATATAGATGCGC‑CTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGAc < 7:1732210/149‑1 (MQ=17) ccAAAAACCACGTTGATATTGCT‑CGCACTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAAAGAGGGTATATCAAATAAAGTTTGATGACtg > 3:921168/1‑151 (MQ=18) ccAAAAACCACGTTGATATTGCT‑CGCACTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAAAAACGATATATCAAATAATGTTATATGACtt > 3:1556490/1‑150 (MQ=18) cAAAAACCACGTTGATATTGCT‑CGCACTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAATAAAGTATATATCAAAAAAAGTATGATGAgtgt > 6:1668560/1‑151 (MQ=18) cAAAAACAACTTTTATATTGCT‑CCCAGTGGGCGAAGGTGGCGGAATTGGTAGCCGCGCTAGCTTCAGGTGTTAGTGTTCTTCCGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAACGAGGCGATATCAAAAAAAGTACGATGACtgt < 7:713493/151‑1 (MQ=21) aaaaCCACGTTGATATTGCT‑CGCACTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCCCCAAAGGAGGGGAGATCCAAAAATGTATGATACCtgtgg > 5:1313541/1‑150 (MQ=18) aaaaCCACGTTGATATTGCT‑CGCACTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAAGAACGATAGATCAAAAAAAGTTTGATgcatgttt > 5:1028680/1‑144 (MQ=17) tGATATTGCT‑CGCACTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTGAAGTCCCCCCCCGCGCACCAAAGGACGGGAAATCAAATAAAGTTTGTTGAGTGTGTGTTGGTGGCg > 1:1474856/1‑151 (MQ=17) gATATTGCT‑CGCACTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAAATTCGCGAAATCATAAAATGTTTGTTGACTGTGTGTTGCTGGCgg > 3:735446/1‑151 (MQ=14) tatTGCT‑CGCACTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAAAGAGGGTATATCAAAAAAAGTTTGTTGACtgttatttgctggcgga > 8:384959/1‑136 (MQ=17) tatTGCT‑CGCACTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCGCGCACCAAACGTGGGTAGATCAAAAAAAGTTAGTTGACTGTTTTAAGGTGGCGGat > 5:655828/1‑150 (MQ=18) taattcttgctagttggCGAAGGGGGCGGATTTGGAAGAGGCTCTAGCTTGAGGTGGTTGTGTTATTACGGACGTGGCGGTTCAAGTCCCACGCCTCGCACGAAACGCGACGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCgg < 3:1496830/135‑1 (MQ=255) agaccT‑CGCACTGGGCGAAGGTGTCGGAATTGGTAGACGCGCTAGCTTCAGCTGTTTGTGTTCTTCAGGAGTTGGGCGTGCTAGTCCCACCCCTCCCACTAAACGAGCCGAAATCAAATAAAGTAATATGACTGTGCGAAGGTGGCGGAAt < 7:379884/147‑1 (MQ=21) tGCT‑CGCACTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCCAACGAGGCGATTTCAAAAAAAGGTAGATGACTGTGGGTAGGTGGCGGAATTg > 3:268322/1‑151 (MQ=21) tGCT‑CGCACTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAAGGAGGGTATTTCAAATAAAGTTTGTTGCCTGTTTTTAGGTGGCGGATTTg > 1:575189/1‑151 (MQ=14) t‑CGCACTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCCCCAAAGAAGGGTAAATCAAATAATGTTTGATGACTGTGTTTAGCTGGCGGAtttctat > 7:455995/1‑147 (MQ=14) gcacggttgtgAAGGTCTCGCAATTGGTAGACCATATAGCTGGAGGTGTTTGTTTTATTAATGACGTTGCGGTTCAAGGCCCACGCCTCCCACCAAACGCGTCGATATCAAAAAAAGTAATCTGACTGTGCGAAGGTGGCGGAATTGGTa < 3:1143701/140‑1 (MQ=255) ggCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAATCAGGGGAAATCCATAAAAGTTTCATGCATGTGGGTTGCTGCCGGAATTGGTataatttt > 1:544173/1‑143 (MQ=11) cGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCCCCAAAATAGGGGAAATCAAAAATAGTAAGATGCCTGTTGTTAGCTGGCGGATTTGTTatccgaatg > 7:1461997/1‑141 (MQ=14) aaGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAACGTGGGGATATCAAAAAAAGTAAGATGCCTGTTGGAAGGTGGCGGAATTGGTAGAAGGGCTAGCt > 1:618441/1‑151 (MQ=21) tGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAAAGAGGGGATATCCAAAAAAGTTTGATGACTGTGGGTTGGTGGCGGAATTTCTATCCGCGGTAGCTTc > 5:1805847/1‑149 (MQ=17) ggAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAAAGAGTGTATTTCAAAAATATTAACTTGACTTTGGGAAGGTGCCCGAATTGCTAGACCGGCAAGGTTCACgtgt > 3:385473/1‑151 (MQ=14) gccacccctcgACCCGCCAGCGGCAGGTGCCAGTGGTCGTCCGGCCGGGGCGGTGCAAGTCCCCCCCCACCCACCAACCGCCGCGAAATCTTAAAAAGTTCGATGACTGTGCGAAGGTGGCGGAATTGCTAGACGCGCTAGCTTCAGgtgt < 7:1288307/141‑1 (MQ=12) gTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTGAAGTCCCCCCCCAAGCACCAAACAACGCGAAATGAAAAAAAGTTATATGAATGATAGAAAGTGGCGGAATTGGAATAAGCGCGAGCATCAGGTGTTAatgt > 7:983504/1‑150 (MQ=12) gTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGCCTGTGGGAAGGTGGCGGATTTGGTAGCCGGGCTAGCTTCAGGTGTTAGTGTc > 1:305024/1‑151 (MQ=255) tAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGGGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAgtgtac > 5:534830/1‑149 (MQ=255) ccccgcgCTCGCGTCAGCTGCTAGTGTTCTTCCGGACGTGGTTGTTTTTTTTCAAGACCTCGCACCAACCGATTTTATATCATATATAGTAAGATTACTGTTCGAAGTTGGTGTTATTTGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCt < 8:673410/148‑1 (MQ=255) gcgcTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCACGCCCCAAACCACGGGATATCAAAAAAAGTAAGATGACTTTTCGTACGTGGCGGAATTGGTATAAGCGCTAGCTTCAGGGGTTATTGTCCGTAcc > 7:92512/1‑150 (MQ=21) gcTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAACGAGGGGAGTTCAAAAAAAGTAAGATGCATGTTGGTTGGTGGCGGATTTGGTATACTCGCTAGCATCAGGGTTTAgtgtagtaaaggc > 6:1654662/1‑142 (MQ=18) cTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTGAAGTCCCCCCCCACCCACCAAAAAAGGGGAATTCAAAAAAATTTTGTTGACTTTTGGTAGGTGGCGGAAATTGGAGACCCCCCACCGTGACGGGGTAGTGTAATTACGGAc > 5:585023/1‑151 (MQ=2) aGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAAAGAGGGTATTTCAAAAATAGTAAGATGAGTGTTGGATCGTGGCGGAATGGGTATAAGTGTGAGCTTCAGGTTTTAttgtaattttggccgg > 1:1120182/1‑139 (MQ=12) aGCTTCAGGTGGTAGGGTTCTTACGGACGTGGGGGGTCAAGTCCCCCCCCTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGCTGACTGTGCGAAGGTGGCGGAATTGGGAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGAc < 3:1502766/149‑1 (MQ=255) gCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCGCGCACCAAACGAGGGGATATCAAAAAAAGTTAGATGCCTGTTGGTAGGTGGCGGAATTGGTATCCTGGCTATCATCAGGTTTTATTGTACTTACGGCCGTg > 7:1688314/1‑151 (MQ=21) cTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAAAGAGGGTATATCAAAAAAAGTTAGTTGACTGTGGTTAGGTGGCGGAATTTCTATAAGAGGTATCTTCAGGTTTTAgtgtaaataaggccgtgg > 5:1610360/1‑137 (MQ=12) cAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGAc < 2:781082/144‑1 (MQ=255) cAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAACGAGGCGATATCAAAAAAAGGAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGGGTTAGTGTCCGTTCGGAc > 1:778586/1‑144 (MQ=255) aGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAAGGTGGGGATATCAAATAATGTTTGTTGCTTGTTGTATGATGGCGGAATTGGTATAAGTTTAATCTTCAGGTTTTAGTGTACTTACTGACGAaggggg > 1:1113718/1‑150 (MQ=9) gtgtTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAAAGAGGGTATATCCAATAATGTTAGTTGCCTGTTGTTTGGTGGCGGAATTGCTTGAAGTGCAATCTTCAGGTGTGAGTGAAATTAAGCACGGGGGGGTTCAAggc > 1:1256845/1‑148 (MQ=12) cTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAAAGAGGGGATATCAAAAAAAGTAAGATGCGTGTGCTAAGCTGGCGGAATTGGTATACGCGCTAGCTTCAGGTTTGAGTGTCCTAACGGACGGGGGGGTTGAAGGcccccgc > 7:589854/1‑149 (MQ=25) ttACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAAAAAGGGGAGATCAATAATAGTATGATGCATGATGTATGGTGGCGGAATGGGATTACTAGGTAGCATCATGAGTGAGTGAAGATAAGGACGTCGGGGTTCTAgaaaaaacg > 6:927205/1‑142 (MQ=2) tACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAAACAGGCGATATCAAAAAAAGTATGATGAATGTGGGTAGGTGGCGGAATTTGTATAAGTGGGATCATCAGGTTTTAGTGAAATTAAGGACGTggcgggtgtaggaaaaaccc > 1:909736/1‑135 (MQ=16) cGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAACGAGGCGAGATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGATAGCTTCAGGTGTTAGTGTCGTTCCGGACGTGGGGGTTCAAGGCCCCCCCCTCGCAcc > 1:1276169/1‑151 (MQ=255) gTGGGGGTTCAAGTCCCCCCCCTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGCCTGTGGGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCGTTACGGACGTGGGGGTTGTAGGccccgcccgaggccc > 7:1202944/1‑143 (MQ=25) tGGGGGTTCAAGTCCCCCCCCTCGCACCAAAAGAGGCGATATCAAAAAAAGTAACATCAATGTTATAACATCCCGGAATTAATATAATAGATAGCTTCAGGTGTTAGTGTCATTAAGGCCGTGGCGGTTCAAGTACCCCGCCTCGccgca > 1:24079/1‑146 (MQ=255) gTTCAAGTCCCCCCCCTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGGTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTGAAGTCCCCGCCCTCGCCCCAATTAtg > 5:842076/1‑150 (MQ=255) ttCGAGTCCCCCCCCTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGGGAAGTTGGCGGATTTGGTAGACGCGCTAGCTTCAGGTGGTAGTGTCATTACGGCCGTGGGGGTTCAAGT‑ACCCCCCTCGCCCCAATTTTCtt > 1:1618545/1‑151 (MQ=21) ttCAAGTCCCCCCCCTCGCACCAAACGAGGCGATATCAATAAAAGTAAGATGAGTGTGCGAAGGTGGCGGAATTGGTAGACGGGGTAGCTTCAGGTGTTAGTGTCCTTACGGCCGTGGGGGTGGAAGGCCGCCGCCTGGCCCCAATTAtgt > 3:1629029/1‑149 (MQ=21) ttCAAGTCCCCCCCCTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGCATGTGGGAAGGTGGCGGATTGCGTAGACGGGCGAGCTTCAGGTGGGAGTGTCGATAGGGACGTGGGGGGTGAAGGaccaccccgtgccgcaagtgtgt > 8:676760/1‑136 (MQ=255) tCAAGTCCCCCCCCTCGCACCAATCGAGGCGAGATCAATTAAAGTAAGTTGCCTGTGCGATGGTGCCGGATTTGGAAGAAGCGCTAGCTGCAGGTGGTCGTCTCCTTAGGGACGTGACGGTGGATGTCCAGCCCCACGCACCacatgtgtg > 4:530728/1‑143 (MQ=255) cAAGTCCCCCCCCTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGCCTGTGCGAAGGTGGCGGAATTGGTAGACGCGGGAGCTGCAGGTGTTAGTGTCGTTAGGGACGTGGGGGTTCAAGGACCACCCCAGGCCCCAATTTTAttt > 1:861334/1‑151 (MQ=21) aGTCCCCCCCCTCGCACCAAACGAGGCGAGATCAAAAAAAGTAAGATGACTGTGCGAAGGTCGCGGAATGGGTAGAAGCGGTAGCTTCAGGTGTTAGTGTCCTTCCGGACGGGGGGGTTCTAGTCACACCCAACGCACCAATTATGtttt > 3:87005/1‑149 (MQ=21) gTCCCCCCCCTCGCACCAAAGGAGGGGAGATCAAAAAAAGTATGATGAGTGTGGGAAGGTGGCGGAATTGGTAGACTGGGTAGCTTCAGGTGGTAGTGTAGTTACGGACGTGGGGGTTGAAGTGCCCCGCAGCGCACCAATCTTATTTACt > 5:1705288/1‑151 (MQ=16) ccccccccTCGCACCAAAAGAGGCTATATCAAAAAAAGTAAGATGACTGTTAGAAGGTGGCGGAATTGCTAGACGCGCTAGCTTCAGGTGTTAGTGTACTTACGGAAGTGGGGGTTCAAGTAACACCCCAAGCACCAAATATGttttatt > 8:620717/1‑146 (MQ=18) ccccccTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCCCCAATTATCTTTACTTCCt > 5:1445323/1‑151 (MQ=255) cccccTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAATTATCTTTACTTCCtt > 5:1857810/1‑151 (MQ=255) cccccTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAATTATCTTTACTTCCtt > 1:51114/1‑151 (MQ=255) cccccTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAATATATTTAATTCCtt > 2:564299/1‑151 (MQ=255) cccccTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGGTCAAGTCCCCCCCCGCGCCCCAATTATGTTTTCTTGCtt > 5:510899/1‑151 (MQ=21) ccccTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAATTATCTTTACTTCCttt > 5:1078889/1‑151 (MQ=255) ccccTCGCACCAAACGAGGCGATATCAAAAAAACTAACAAGACTGAGCGAAGGTCGCGGAATTGGTNGANNNNNTANCTACAGGAGTTACTGTCCTAACGGACGTCGCGGTTCAAGTCCCCGGCCACGCAACAAATaaatatacatccat > 2:957663/1‑137 (MQ=255) cccTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAATTATCTTTAATTACttt > 4:1273048/1‑150 (MQ=255) ccTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTCGGGGTTGAAGGCCCCCCCCTGGCACCAATTTTCATTACATCCtttat > 6:1432087/1‑149 (MQ=21) tCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAATATGTTTAATTGCGttgttg > 6:1345604/1‑151 (MQ=18) gCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCCCCAATTATCTTTACTTCCTTTCTTGtt > 6:1290330/1‑151 (MQ=255) gCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTCTCCTTACGGACGTGGGGGTTCTATTCCCCCCCCTCGCCCCCATTTTATTTACTTCCGTTCTTGtt > 7:1442751/1‑151 (MQ=21) cACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAATTATCTTTACTTCCTTTCTTGttt > 2:1388252/1‑151 (MQ=255) aCCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTGGCACCAATTATCTTTACTTCCTTTCTTGtttg > 6:1778931/1‑150 (MQ=255) aCCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCCCCAATTATCTTTACTTGCTTTCTTGtttg > 8:171105/1‑150 (MQ=255) aCCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAATTATCTTTACTTCCTTTCTTGtttg > 2:325668/1‑150 (MQ=255) aCCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAATTATCTTTACTTCCTTTCTTGtttg > 3:1336842/1‑150 (MQ=255) ccAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAATTATCTTTACTTCCTTTCTTGTttct > 7:1207425/1‑151 (MQ=255) cAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCCCCAATTATCTTTACTTCCTTTCTTGTttctt > 3:194015/1‑151 (MQ=255) cAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAATTATCTTTACTTCCTTTCTTGTttctt > 1:1615809/1‑151 (MQ=255) aaaCGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTGCCCCCCCTCGCACCAATTATGTTTACTTCCTTTCTtgtttgttg > 2:531339/1‑150 (MQ=255) aaaCGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCCCCAATTATCTTTACTTCCTTTCTTGTttcttc > 3:617082/1‑151 (MQ=255) aaaCGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAATTATCTTTACTTCCTTTCTTGTttcttg > 2:1479004/1‑150 (MQ=255) aaaCGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGGGGAAGTGCCCCCCCGCGCCCCCACTATGTTTTCTTGCGTTGTttttttttg > 7:446988/1‑150 (MQ=18) aaCGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCCCCAATTATCTTTACTTCCTTTCTTGTTTCTTcc > 3:1284890/1‑151 (MQ=255) aaCGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAATTATCTTTACTTCCTTTCTTGTTTCTTcc > 3:613441/1‑151 (MQ=255) aaCGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGGGCCCCCCCTCGCACCAATTATCGTTACTTCCTTTCTTGTTTCTTcc > 4:235894/1‑151 (MQ=255) aCGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAATTATCTTTACTTCCTTTCTTGTTTCTTCCt > 8:918867/1‑151 (MQ=255) cGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAATTATCTTTACATCCTGTCTTGTTTGTTCCtt > 5:484093/1‑151 (MQ=255) gAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGGTGAAGTCCCCCCCCTCGCCCCAATTATCTTTACTTCCTTTGTTGTTTCTTCCTTg > 5:628677/1‑151 (MQ=255) aGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAATTATCTTTACTTCCTTTCTTGTTTCTTCCTTg > 3:190403/1‑150 (MQ=255) aGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCACGCACCAATTATGTTTAATTCCTTTCTTGTTTATTCCTTg > 8:448094/1‑150 (MQ=255) cGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAATTATCTTTACTTCCTTTCTTGTTTCTTCCTTGAttt > 7:1497043/1‑151 (MQ=255) | GGGGTTCAAGTCCCCCCCCTCGCACCAAAAACCACGTTGATATTGCT‑CGCACTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAATTATCTTTACTTCCTTTCTTGTTTCTTCCTTGATTT > DH1/3906688‑3906987 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |