Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*DH12,169,5770TG29.3% 197.7 / 53.8 188R661R (CGA→CGC) rsxCelectron transporter RsxC
Reads supporting (aligned to +/- strand):  ref base T (31/97);  new base G (8/45);  total (44/144)
Fisher's exact test for biased strand distribution p-value = 2.33e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 189 total aligned reads displayed.

GTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTCTTCTGG  >  DH1/2169429‑2169726
                                                                                                                                                    |                                                                                                                                                     
  tcttctGGTACCGCATTATCCTGTTGCTGTTCCAGCTTGCGTGCTTGCGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCgg                                                                                                                                                    <  2:20687/150‑1 (MQ=255)
     tctGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCa                                                                                                                                                 <  8:258934/150‑1 (MQ=255)
     tctGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCa                                                                                                                                                 <  4:755606/150‑1 (MQ=255)
        ggTACCGCATTAGCCTGGTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAAt                                                                                                                                               <  8:38212/149‑1 (MQ=255)
         gTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTCGCGCGGGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGc                                                                                                                                            <  3:277590/151‑1 (MQ=255)
           acgtgaTTAGCCTTGTGCTGGTCCAGCTTGAGTGCTTTGGCGCGGTCAATAGCCGCTTCGACGGCAGCTTTGCGAGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCgg                                                                                                                                          <  2:703025/146‑1 (MQ=25)
           aCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCgg                                                                                                                                          <  7:309255/151‑1 (MQ=255)
            ccGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCACTAGCCGCTTCGACGCCTGCTATGCGCGGATCCCCCTGTTGTTCTGGGTCCGCATTAGCCTGTTGCTGTTCCAGATTGCGCGCTTTGGCGCGGGCagtgggggg                                                                                                                                         >  7:64087/1‑143 (MQ=11)
             cGCATTAGCCTGGTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTGCTACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCt                                                                                                                                        <  4:611312/151‑1 (MQ=255)
               cATTAGCCTGTTGCTGTTCGTGCTTTCTTGCTTTGGCGCGTGGAATAGCCGCTTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCTGGCAATAGCGGCTTc                                                                                                                                      <  2:759225/151‑1 (MQ=25)
                aTTAGCCTGTTGCTGTTCCTGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCTACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTc                                                                                                                                      <  6:463704/150‑1 (MQ=255)
                aTTAGCCTGATGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCg                                                                                                                                     <  2:1531373/151‑1 (MQ=255)
                 ttAGCCTGTTGCTGGTCGAGCTTGCGGGCTTTTGCGCGTGCAATAGCCGCGTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTc                                                                                                                                      <  4:882923/149‑1 (MQ=21)
                   aGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAcg                                                                                                                                  <  2:508650/151‑1 (MQ=255)
                     ccTGTTGCTGTTCCAGCTTGCGTGCGTTGGCGCGTGCAATAGCCGCGTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAcggc                                                                                                                                <  7:245132/151‑1 (MQ=255)
                        gTTGCTGTTCTTGCTTGCGTGCTTTTGCTCTTGTAATAGCCGCTTCGAGGGCAGCTTTGCGCGGATCATGCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGGTCGGGCAATAGCGGCTTCGAcggcgg                                                                                                                              <  8:302993/150‑1 (MQ=17)
                        gTTGCTGTTCGAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGTCTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAcggcg                                                                                                                               <  7:1526162/149‑1 (MQ=255)
                        gTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCGGCTTTGCGCGGATCAACAGGTTCGTCGTGCTCGCCATTACCCAGTTGCTGTTCCCGATTGCGTGCTGTGGCTCGGCAAATAGCGGCTTCgcgggcggg                                                                                                                             >  1:1313751/1‑150 (MQ=14)
                        gTTGCTGGTCGCGCTTTCTGGCTTTTGCGCGTGCAATAGCCGCGGCTACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAcggcg                                                                                                                               <  6:144827/149‑1 (MQ=17)
                           gctggtcgcggttGCGGGCTTGGGCGCGTGCAATAGCCGCGTCTACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCtt                                                                                                                           <  2:919050/139‑1 (MQ=17)
                           gCTGTTCCAGCTTGCGGGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCttt                                                                                                                          <  5:1115855/151‑1 (MQ=255)
                           gCTGGTCCAGCTTGCGGGCTTTCGCGCGTGCAATAGCCGCGTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCtt                                                                                                                           <  2:299009/150‑1 (MQ=255)
                              gTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGGTTTACGCGGTTCACCCTCGTCTTCTGCCTGCGCATTACCAGGTTGGTGTTCCAGTTTGCGCGGTTTGGGGATGGCAATAGCGGCTTCGCCGGCGGGTTTgcg                                                                                                                       >  1:1087562/1‑151 (MQ=14)
                              gTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTgc                                                                                                                        <  7:1070760/150‑1 (MQ=255)
                              gTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTg                                                                                                                         <  6:56390/149‑1 (MQ=255)
                                tCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTgcgc                                                                                                                      <  7:183978/150‑1 (MQ=255)
                                tCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGAGGATCCACCTGTTCTTCTGGGTCCGCATTACCGGGTTGCTGTTCCCGATTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGCCggcggcgtggggcg                                                                                                                     >  7:58765/1‑143 (MQ=14)
                                 cgcgCTTGCGGGCGTTGGCGCGTGCAATAGCCGCGTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGcgcg                                                                                                                     <  8:129093/147‑1 (MQ=17)
                                  gcggttgattGCTTTCGCGCGTGCAATAGCCGCTGCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGa                                                                                                                   <  4:1459746/142‑1 (MQ=17)
                                  cAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCCACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTAAAGATTGCGCGCTTTGGCTCGGGCAATGGCGGCTTGGGcggcggggtggcggggc                                                                                                                   >  7:1117843/1‑140 (MQ=255)
                                  cAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACATCTTCTTCTCGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGAGCTTTGGCTCGGGCAATAGCGGCTTCGCCGGCGGCtaggggcggc                                                                                                                   >  7:1116063/1‑142 (MQ=255)
                                    gatttattgcatgtgcgcGTGCAATAGCCGCTTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGAt                                                                                                                  <  6:821485/136‑1 (MQ=17)
                                    gCTTGCGGGCGTGGGCGCGGGCAATAGCCGCTGCGACTGCAGCTTTGCGCGGAGCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATc                                                                                                                 <  5:86485/151‑1 (MQ=17)
                                    gCTTGCGGGCCTTGGCGCGGGCAATAGCCGCTGCTACGGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATc                                                                                                                 <  3:951748/151‑1 (MQ=14)
                                     gttGCGTGCGTTCGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCg                                                                                                                <  7:829193/150‑1 (MQ=255)
                                     cTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCCAGCTGTTCTTCTGTCTCCGCATTAGCGGGTTGATGTTCCCGTTTGCGTGCTTTGGCTCGGGCAATAGCGGCTTCGCcggcgggggggcgcggggcg                                                                                                                >  5:1290605/1‑137 (MQ=255)
                                       tGCGGGCTTTGGCGCGTGCAATAGGCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCAGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGa                                                                                                               <  7:1336068/150‑1 (MQ=255)
                                            gcttgagctcgggCAATAGCCGCTTCTACGTCGTCGTTGTTCGGATCTACTTGTTCTTCTTGCTCCGGATTAGCCTTTTGCTGTTCGCGGTTTTTGGCTTTTGCTCGGGCAATAGCGGCTTCTACGGCGGCTTTGCGCGGATCGACCtgtt                                                                                                         <  4:421903/139‑1 (MQ=2)
                                            gCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTGTTCTGGGTCCGCATTAGCCTGTTGCTGTTCCCGGTTGCGCGCTTTGGCGCGGGCCATAGCTGCTTCCACGGCTGATTTACGCGGATctccaaggg                                                                                                         >  1:643102/1‑143 (MQ=11)
                                             cTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCGACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGGTTGCGCGCTTTGGCGCGGGCGATAGCGGCTTCGACGGCGGCTGTGCGCGGGTctgccggggg                                                                                                        >  1:975229/1‑142 (MQ=14)
                                              gttGGCGCGTGCAATAGCCGCTTCCACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCtgttgt                                                                                                       <  3:1087439/150‑1 (MQ=255)
                                                ttgcgcGTGCAATAGCCGCGTCTACCGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTgttgtt                                                                                                      <  4:1234682/148‑1 (MQ=14)
                                                  gcgcGTTCAATCGCCGCTTCGACGGCAGCTTTGCGCGGATGAACCTGTTGTTATTGCTGCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGTCTCGGGGAATAGCGGCTTCGAGGGCGGCTTTGCGCGGATCGACCTGTTGTTCTg                                                                                                   <  8:1135396/151‑1 (MQ=17)
                                                  gcgcGTGCAATAGCCGCTTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTg                                                                                                   <  7:1466377/151‑1 (MQ=255)
                                                  gcgcGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTg                                                                                                   <  7:69419/151‑1 (MQ=255)
                                                   cgcgTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTgg                                                                                                  >  5:441007/1‑151 (MQ=255)
                                                      gggCAATAGCCGCGGCGACGGCAGCTTTGCTCGGATCAGCCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTGCCCGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTc                                                                                               <  1:832192/149‑1 (MQ=14)
                                                        gCAATAGCCGCTTCGACGGCAGCTTTGCGCGGAGCAACCTGGTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGGGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCgg                                                                                             <  3:125740/151‑1 (MQ=255)
                                                         cAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTGCGACGCCGGCTTTGCGCGGATCGACCTCGTGTTCTGGCTCGGc                                                                                            >  3:1280022/1‑151 (MQ=255)
                                                          aaTAGCCGCTTCGACGGCAGCTTTGCGCGGATCGACCTGTTCTTCTGGATACAAATTAACAGCGTCCTGTTCCCGAATGCTCTCAATGGATCTGTAAATATCGGATTCGACCGAGGCTTTTAAAAAATAGACCTGTGGTTCTGGGTCgggg                                                                                           >  8:192998/1‑149 (MQ=2)
                                                             atccGCTTCGACGGCCTCTTTTCGCGTATCACCCTGTTCTTCGGGCTCCGCATTAGCCTGGTGCTGGGCCCGTTTGCGGGCTTTTGCGCGGGCAATAGCCGCTGCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCAtt                                                                                         <  4:568716/148‑1 (MQ=14)
                                                             aGCCGCTGCGTCGGGAGCTTTGCTCGGATCATCCTCTTCTTCTGGCTCCGGATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTa                                                                                        <  1:1015865/151‑1 (MQ=17)
                                                                 gCTTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGCTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCt                                                                                    <  8:1196224/151‑1 (MQ=255)
                                                                   gtctaCGGCAGCTGTGCGCGGATCACCCTGTTCTTCTGGCTCCGCATTAGCCTGGTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGt                                                                                  <  3:1401501/147‑1 (MQ=255)
                                                                     caaccgccgCTTTGCGCGGAGCAACCTGTTCTTCTGGCTCCGCATTAGCCGGCTGCTGGTCCCGTTTGCTGGCTTTTGCTCGGGCAATAGCGGCTGCTACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGtt                                                                                 <  8:1513762/142‑1 (MQ=17)
                                                                     cGACTGCAGCTGTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGtt                                                                                 <  3:164498/150‑1 (MQ=255)
                                                                     cGACGTCAGCTTTGATCTGATCAACCTGTTCTTCTGGCTCCGCATTAGACGGTTGCTGTTCCCGTTTGCTCGCTTTCGCGCGGGCAATAGCGGCTTCTACTGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTg                                                                                <  6:973003/151‑1 (MQ=17)
                                                                      gACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTg                                                                                                                         >  1:434833/1‑109 (MQ=255)
                                                                          ccAGCGTTCCGCGGATCAACCTGTTCTTCTTTTTTTTCATTAGCCGGTTGCTGTTCCAGTTTGAGATCTTTGGATCGTGCTATAGTCGCTTAGACTGTTGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGtt                                                                           <  2:1180655/150‑1 (MQ=255)
                                                                           cAGCTTTGCTATTATCTACCTGTTCTTCTGGCACCTCATTAGCGTGGTCCTGTTCCCGCTTCCGCGCTTCGCATCGGCCATTAGCCGCTTCCACTGCCGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTc                                                                          <  6:620617/151‑1 (MQ=2)
                                                                             gcgttGCGCTGATGAACCTGTTGTTCTTGCTCGTCTTTAGCCTTCTGCTGTTCCGGTTTTTTGGCTTTTGCTCGGGCAATAGCGGCTTCTACTGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTcc                                                                         <  4:1505452/147‑1 (MQ=2)
                                                                               tttGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTCCGCGGATCGCCCTGTGTTTCTGGGTCGGCATTAGCCTGTTGCTGTTCCAgg                                                                      >  1:258070/1‑150 (MQ=255)
                                                                                  ccgcgGATCAACCTGTATTTCTGGCTCCTGAATAGCCTGCTGCTGGTCGGGTTTGCGGGCGTTCGCTCGGGCAATAGCGGCTGCTACGGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTg                                                                   <  8:1330682/150‑1 (MQ=14)
                                                                                   atcgGATCATCCTGTACTGGTGTATCCGCATTCGACTGGGGGTGTGCCCGTGTGCGCGGTTTGCTTCGGGCATTAGCCGCGTCCACTGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTg                                                                   <  3:1234295/148‑1 (MQ=9)
                                                                                       gctCAAGCTGTTCTTCTGGCTCGGCATTAGCCTGGTGCTGTTCCCGTTTGCGGGCTTTCGCTCGGGCAATAGCGGCTTCGACTGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGc                                                              <  3:584973/149‑1 (MQ=14)
                                                                                         tCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGATTGCGCGCTTTGGCGCGGGc                                                                                                                                                  >  8:430303/1‑65 (MQ=255)
                                                                                            acgtgctcttcgGCCTCCTCATCAGCCTGCTGCTGGGCGCGTTTGCGGGCTTTCGCGCGGGCAATAGCCGCGGCTACTGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTgg                                                         <  6:376258/145‑1 (MQ=9)
                                                                                               tGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCTGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGGTCGGCATTAGACTGTTGCTGTTCCAGCTTGAGTGCTTTGTCAc                                                      >  7:1385103/1‑151 (MQ=255)
                                                                                                gctcttctGGCTCCGCAAGACCCTGCTGCTGTGCGCGTTTTCGGGCCTTCGCGCGGGCAATAGCGGCTGCTACTGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACg                                                     <  5:161330/149‑1 (MQ=14)
                                                                                                gTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCGCGTGGGATGGGCGCTGGGCGGGCGTCGATTCGCGGATAGCGATGTGGTTATGGGTCGGCATTATGAAGTTGATCTTCCCGCTTGCggggggtggcggg                                                     >  7:386627/1‑139 (MQ=255)
                                                                                                   cttctGGCTCCGCATTAGCCGGTTGCTGTTCCAGATTGCGCGATTTGGCACGAGCGAAATCGTCTTAAACGGCGGCGGTGCGAGGGTAGAGCTGTGGTTCTGGCTCAGCATTAAAAAGTTGCTGTTCCAGCTTGCGGGCGTTgggcagggg                                                  >  2:1384078/1‑144 (MQ=255)
                                                                                                      cgtcctcctcATCACCCTGCTGCTGGGCGCGTTTGCGCGCCTGCGCGCGGGCAATAGCGGCGGCGACGGCCGCTTTGCGCGGATCTACCTGTTCTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCaa                                                <  2:960267/146‑1 (MQ=11)
                                                                                                            cgtcttgaGCCGGGTGCTGTTCCCGGTTGCGCGCTTTGGCGCGGGCAATAGCGGCGTCGACGGCGGCTTTGCGCGGATCAACCTGTTGTTCTGGGTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCg                                           <  5:154218/142‑1 (MQ=14)
                                                                                                            cggctttATCCGGTTGCTGTTCGCGTTTTCTGGCTTTTGCGCGGGCAATAGCGGCTTCTACTGCCGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCg                                           <  6:657013/144‑1 (MQ=14)
                                                                                                               gaTTAGCCTGTTGCTGTTCGGGTTTGTTGGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTc                                      <  8:1113441/150‑1 (MQ=14)
                                                                                                               cATTAGCGGCTCGCTGTTCCCGTTGGCGAGCTTTGGCGGTTGTAATAGCCGCTGCTACGGCCGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTc                                      <  8:127079/151‑1 (MQ=14)
                                                                                                                cgtAGCCTGTTGCTGTTCACGATTGTGTTCTTTGGTGCGGGCAATAGCGGCTGCTACTGCCGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCg                                     <  2:1040361/149‑1 (MQ=11)
                                                                                                                aTTAGCCTGTTGCTGTTCGGGTTTGGGGGCGTTTGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTc                                      <  6:1360320/150‑1 (MQ=14)
                                                                                                                 ttAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACATGTTGTTCTGGGTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCg                                     >  4:1293559/1‑150 (MQ=255)
                                                                                                                   acccgtctGCTGGTCGCGTTTTCGGGCGTGGGCGCGGGCAATAGCCGCGGCCACTGCGGCTTTGCGCGGATCGACCTGTTCTTCTGGCACGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGAcg                                  <  5:1186250/144‑1 (MQ=11)
                                                                                                                     ccgtctGCTGGGCCCGTTTTGGGGCGTTGGCGCGGGCAATAGCCGCTGCTACGGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGAcggc                                <  7:1494268/146‑1 (MQ=14)
                                                                                                                       gggtgctgggccgctttGCGGGCGTTCGCGCGGGCAATAGCCGCTGCGACGGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGAcggcgg                              <  3:69958/137‑1 (MQ=14)
                                                                                                                       gggtGCTGGTCCGGGGTGCGCGCTTTGGCGCGGGCAATAGCGGCTGCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGAcggcgg                              <  6:595690/148‑1 (MQ=14)
                                                                                                                         gtgccgcccccccctGCGCGCTTTCGCTCGGGCAATAGCGGCTTCGACGGCTGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCt                            <  6:442799/137‑1 (MQ=14)
                                                                                                                          tGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGATCGGCATTAGACTGTTGCTGTTCCAGCTTGCGTGCTTTTGCACGGGAAATAGCGGCTTCGACGGCGGCtt                           >  8:885265/1‑151 (MQ=255)
                                                                                                                           gctgggcccGTTTGCGCGCGTTGGCGCGGGCAATAGCCGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCttt                          <  3:427537/145‑1 (MQ=255)
                                                                                                                           gCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCgg                                                                                                                                          >  1:1009316/1‑39 (MQ=255)
                                                                                                                           gCTGTTCCCGTTTGCGCGCTTTGGCACGGGCAATAGCgg                                                                                                                                          <  2:1019892/39‑1 (MQ=255)
                                                                                                                              gtccccGCTTGCGGGCGTGGGGTGGTGCACTCGCCGCTTCCCCGGGCGCTTTGCGCGGATCCACCTGTGCTTCTGGGTCCGCATTAGCCGGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTgcg                       <  7:1109841/148‑1 (MQ=2)
                                                                                                                              gTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGGTTTGCGGGGATAGAGCGGTAGATCTGCCTACTCATGACCATTGACGAGTTCCAGGTTGCGAGCTTTGGCTCGGGCTCTAGATCATTCGACGGCGGGGTTgcg                       >  3:1180510/1‑151 (MQ=9)
                                                                                                                               ttCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGGTTTGCGGGGATCGCCCTGGTGTTCTGGGTCGTGATTAGCCTGTTGGTGTTCCAGCTTGCGTGGGTTGGCCGGGGAAATAGCTGCTTCGCcggcggtgttacgc                      >  3:1449800/1‑143 (MQ=14)
                                                                                                                                tcgggttttggggggttGGCTCGGGGAATAGCCGGGTCTACTGCGGCTTTGCGCGGATCCACCTGTTGTTCTGTATCGTCATTAGCCTTTTGCTGTTCCAGCTTGCGTGCTTTGGCACTTGCAATAGCGGCTTCGACGGCGGCTTTgcgc                      <  7:406386/135‑1 (MQ=14)
                                                                                                                                  gcggttGCGCGCCTGCGCGCGTGCAATAGCCGCGGCCACTGCGGCTTTGCGCGGATCCACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGa                   <  5:893276/147‑1 (MQ=14)
                                                                                                                                  gcctttGCTGGCCTTCGCGCGGGCAATAGCGGCGTCTACTGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGa                   <  5:682638/148‑1 (MQ=14)
                                                                                                                                  ccgcgtGCGTGCTTTGGCGCGTGAACTAGCCTCTGCCACGGCGGCTTTGCGAGGATCGACCTGTGGTTCTCGCTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGa                   <  3:187421/146‑1 (MQ=11)
                                                                                                                                    gtgtGCGGGCGTTGGCGCGGGCAATAGCGGCTGCGCCGGCCGCTTTGCGCGGATCCACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCCCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATc                 <  7:238176/148‑1 (MQ=14)
                                                                                                                                          gcgcTTTGGCTCGGGCAATAGCGGCTTCGACGGCCGAGATCCGCGGAGCCCCCGGGTGATCTCGATACCCCAAATCCTCTTGCTGTTCCAGCTTGCGGGCTTTCTAAAGGCCGATAGCGGCTTCGCCGGCGGCGGTGGGCggcgcgcccgg           >  1:1318921/1‑142 (MQ=2)
                                                                                                                                               ttGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGAGGATCGCCCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCCCGGGCAATAGCTGCTTCGACGGCCGGTTTTCGCGGATCCTCCTGtggtt      >  7:1234640/1‑147 (MQ=14)
                                                                                                                                                 ggCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCCACCACTTGTTCTGGGTCGGCATTATCCTGTTGATGTTCCAGATTCCGTCATTTTTCCCGTGAAATAGAGGCTTCAACGGCGGGTTTGCGACGATcagccaggtatgct    >  4:1413945/1‑138 (MQ=9)
                                                                                                                                                   cTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGAGGATCGACATGTTGTTCTGGGTCGTAATTATCCTGTTGCTTTTCAAGATTGAGGGCTTTGGCACGGGAGATAGAGGATTCGAAGGAAGATTTGCTAGGATCAACATGTTATTATgg  >  4:1544212/1‑151 (MQ=2)
                                                                                                                                                    |                                                                                                                                                     
GTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTCTTCTGG  >  DH1/2169429‑2169726

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑