| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | DH1 | 3,906,837 | 0 | C | G | 33.3% | 104.2 / 19.6 | 76 | intergenic (+8/‑27) | ECDH1_RS19315/ECDH1_RS19320 | tRNA‑Leu/tRNA‑Leu |
| Reads supporting (aligned to +/- strand): ref base C (30/16); new base G (23/0); total (59/17) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.43e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GGGGGTTCAAGTCCCCCCCCTCGCACCAAAAACCACGTTGATATTGCTCGCACTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAATTATCTTTACTTCCTTTCTTGTTTCTTCCTTGATTT > DH1/3906687‑3906987 | ggccccgccaGTACCCCCCCTCCGACCTACAACCTCTTTTATATTCCTGTCAGTCGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCTCGCACCAAACGAGGc < 3:1298135/142‑1 (MQ=14) gggcggcctcgacgcccccTCGGACCAATAACCACGTTGATATTGCTCTCCCTTGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCTCGCACCAAACGAGGCg < 7:334946/137‑1 (MQ=18) gtgTTCAACTCACCCGCCTCGGACCTAAAAACACTTTTATATTTCTCTCACTCGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCTCGCACCAAACGAGGCGa < 8:1400770/149‑1 (MQ=17) cccaactccggcgccTCGCAGCAACCACGACTTTGATAGTTCTCCCCGTCGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCTCGCACCAAACGAGGCGatat < 4:695692/138‑1 (MQ=14) caactcctgccccTCGCACGAATAAAGACGTTTATATTTCTGTCTCTTTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCTCGCACCAAACGAGGCGatat < 8:1315493/140‑1 (MQ=14) ccTCGCACCAAAAACCACGTTGATATTGCTCGCACTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCTCCCACCAAATAACGGGACATCcaaaaatgattc > 4:903164/1‑145 (MQ=18) gcccACCAACAAACTCGTTTATATTCCTGTGTCTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGAt < 7:1325149/148‑1 (MQ=17) cGCACCAAAAACCACGTTGATATTGCTCGCACTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTACTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCACGCACCAAAAGACGATAAATCAAAAAAAGTAAAAt > 4:770864/1‑150 (MQ=18) gCACCAAAAACCCCTTTTATATTGCTCGCCCTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGa < 7:859678/151‑1 (MQ=255) gCACCAAAAAACACGTTGATATTTCTCGCACTGGGCGAAGGTGGCGGTATTTGTAGACGCGCTAGCGTCAGGTGTTAGTTTTCTTACGGACGTGGGGGGTGAAAT‑GCCCCCCCCCGCCCCCAAAGAGGGGAAATCaaaaaaatttttttgg > 4:1519511/1‑142 (MQ=255) cACCAAAAACCACGTTGATATTGCTCGCACTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCTCCCCCCAAAAGAGTGTAGATCCAATAAAGTatcatgc > 4:1533768/1‑144 (MQ=18) cACCAAAAACCACGTTGATATTGCTCGCACTCGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTACTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCACGCACCAAAACACGCGAGATCAAAAAAACTAAAAtca > 4:1273028/1‑148 (MQ=18) aCCAAAAACCACGTTGATATTGCTCGCACTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCACGCACCAAAAAAAGTTAAATAAAAAAAAGTTAAATGaat > 8:825688/1‑149 (MQ=17) aCCAAAAACCACGTTGATATTGCTCGCACTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGGTGAAGT‑ACCCCCCCGCGCACCAAAACAGGGGATTTACAATAAAGTTTGATGACt > 7:70937/1‑151 (MQ=18) cAAAAACCACGTTGATATTGCTCGCACTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTAAAGT‑ACCCCCCCAACCACCAAAAAAAGATAAAAAAAATAAAGTAAGATGaattt > 2:499780/1‑147 (MQ=17) cAAAAACCACGTTGAAATTGCTCGCACTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCTCGCCCCAAAAAACGGTATATCAAATAAAGTTAGATGAgtgt > 8:1000255/1‑151 (MQ=18) aaaaaaCACTTTGATATTGATCGGTCTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACtgtg < 3:512471/151‑1 (MQ=255) aaaCCACGTTGATATTGCTCGCACTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCTCGCACCAAAAAACGGGAAATCCATAAAAGTTAgttccatgtttt > 8:504880/1‑140 (MQ=17) aCCACGTTGATATTGCTCGCACTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTAAAGT‑CCCCCCCCGCGCCCCAAACTAGGGTATATCAAAAAAAGTTATTTGACTTTGTGat > 7:706247/1‑150 (MQ=18) aCGTTGATATTGCTCGCACTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCGCGCACCAAAAGAGGGGATTTCAAAAAAAGTTAGTTGACGTTGAGAAGGt > 7:76273/1‑151 (MQ=18) tGATATTGCTCGCACTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCTCGCCCCAAAAGTCGTGAAATCAATAAAAGTTTGTTGACtgtttgttgttggcg > 7:1322751/1‑139 (MQ=17) atatTGCTCGCAGTTTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGTGGTTCAAGT‑CCCCCCCCTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGa < 1:538662/151‑1 (MQ=255) tattattgttccTGGGCGAAGGTGGCTGAATTGGTAGACGCGCTTGCTTCAGGTGTTAGTGGTCTTACGGAGGTGGGGGTGCAAGT‑CCCCCCCCTCGCACCAACCGCGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGa < 5:868941/139‑1 (MQ=21) atgatttgtatgtttgCGAAGGTGTGGTAATTTTTAGACGACATAGCTTTATGTGTAATTGTTCTTACGGACGTGGTGGTGCAATT‑CACACCCCTCGGACCAACCGATCCGATATCAAAAAAAGTAATATGACTGTGCGAAGGTGGCGGa < 8:1298842/135‑1 (MQ=255) atTGCTCGCACTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGGTAAAGT‑CCCCCCCCGCGCCCCAAAACACGGGATATCAAAAATAGTTAGGTGCCTGTTGTTAGGTGGCGGAAt > 1:1538775/1‑151 (MQ=17) acctccaagttagCGAAGGGCGCGGAATTGGTAGACCCTCTAGCTTCAGGTGTAAGTGTTCTTACGGACGTGTGGGTGCAAGT‑CCCTCCCCTCGCACCAAACGCGGCGAAATCAAAAAAAGTAAGCAGAGTGTGCGAAGGTGGCGGAAtt < 8:1209670/138‑1 (MQ=255) tCGCACTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTAAAGTCCCCCCCCCACCCACCAAAACCGGGGCTAACAAAAAAAGTTATATCACTGTTGGAATGTTGCGCAGTTgtt > 7:1325024/1‑149 (MQ=9) atgtactcGAAGGTGGAGGAATTGGTAGACGCGGTAGCTTTTGGTTTTTTTGTAATTATTGACGTTTGGGTGCAAGT‑CCCTCGCCTGGGACTAACCGCTTCGATATCTTTTAAAGTAATTTGTGTTTGCGAAGGTGGCGGAATTGGTAGa < 6:1130919/143‑1 (MQ=255) aCTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCACGCACCAAAAAAGTAAAAAACAAAAAGAGTAATTTAACTGAAAGAAGGTCCCCGAATTGGTataa > 6:19002/1‑147 (MQ=11) cTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCTCGCACCAAAACACGGGATATCAAAAAAAGTTTGATGACTGTGGGTAGGTGGCGGAATTCGTataatc > 7:1097330/1‑146 (MQ=17) gggCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCTCGCCCCAAAAAACGGGAAATAAAAAAAAGTATGATGAATGTTATATCATGGCGGAATTggattacaaa > 8:1124945/1‑142 (MQ=14) gAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCTCGCACCAAACGAGGCGATATCAAAAAAAGTAAg < 2:835283/111‑1 (MQ=255) aaGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCACGCACCAAAACAGGCGATATCAAAAAAAGTTTGATGCATGTGGTTTGGTGGCTGAATTGGTTGAAGGGGTAGCt > 7:244611/1‑151 (MQ=14) aggggccGGAAGTGGGAGACGGTGTAGCTTCAGGTGATAGTGTTCTTCCGCACGGGGTGGTTGACTT‑CCCCGCCCTCGCACCAACCTCCGATATATCAAAAAAAGTAATCTGACTCTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCtt < 7:353080/145‑1 (MQ=255) aGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCTCGCACCAAAAAAGGATATATCAAAAAAACGAAGATTACTGTAAGAAGGTGGCGGAATTGGTAGaacgccttggtt > 4:1247010/1‑140 (MQ=17) aaatgctacacccgcTAGCGGCAGTAGTTAGTGTTCATCGGGCCGTGGGGGTGGCAGT‑CCCCCCCCTCCCCCGACCCCACCCGATCTCAATCAAATTCATATCACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTa < 7:384799/139‑1 (MQ=9) cgcTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCTCGCACCAAAAGAGGGTATATCAAAAAAAGTTTGATGCATGTTATATGGTGCCGGAATTTATATAAGAGGAATCTTCATGTGTTActgtaaatacgc > 5:973063/1‑143 (MQ=9) gcTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCACGCCCCAAACGAGGGGATATCATAAAAAGTAAGTTGCATGTTCTAAGGTGGCGGCATTGGTAGAAGCACTAGCTGCAGGTGTGAgtgtacatatggc > 3:375006/1‑142 (MQ=18) tAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTGAAGT‑CCCCCCCCGCGCCCCAAAAGATGGGAAATCAAAAAAAGTTAGATGACAGTTGGTAGGTGGCGGAATTGCTAGACAGGCTAGCATCATGTGTTAgtgtaagaaaggacc > 7:56849/1‑140 (MQ=255) tAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCTCGCACCAAACGCGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTg > 3:299526/1‑102 (MQ=255) tAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTg < 4:301743/102‑1 (MQ=255) ggTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCTCGCACCAAAGGAGGGGAGTTCAAAAAATGTTTGATGAGTGTGGGATGGTGGCGGAATTGGTTGAAGGTGTAGCTTCATGTGTTAGTGTAATTATGGCCGTGGGGGtg > 3:121610/1‑150 (MQ=16) ttAGTGTTCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCTCGCACCAAACGAGGGGATATCAAAAAAAGTTAGATGCCTGTGCTTAGGTGGCGGAATTGGTATACTGGGGATCTTCAGGTGGTAGTGTCCTTAAGGCCGTGGGGGttga > 7:490993/1‑147 (MQ=25) tgtTCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCTCGCACCAAACGAGGGGATTTCAAAAAAAGTAAGATGACTGTGGGAAGGTGGGGGTATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTAGGGACGTGGGGGTTGAAGTcc > 5:716741/1‑150 (MQ=37) tgtTCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCTCGCACCAAACGAGGGGATATCAATAATAGTTTGATGCCTGTGTTTTGGTGGCGGATTTGGTATACGGGGTAGCTTCAGGTTTTACTGTACTAAGGGCCGTGGGGGttgtaggca > 5:771163/1‑143 (MQ=16) cTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCTCGCCCCAAAGGACGGGATATCAAAAAAAGTTTGATGCGTGTGGGTAGGTGGCGGATTTGGATGCCGGGGGAGCGTCAGGTGTTCGTGTAATTAGGGCCGGGGGGGtggtaggccgcccc > 2:467832/1‑138 (MQ=12) ttACGGACGTGGGGGTTCAAGT‑CCCCCCCCTCGCACCAAAAGAGGGGAAATCAAATAAAGTTAGATGCCTGAGAGAAGGTGGCGGAATTGGTAAACGCGGGATGGTCCGGTTTTAGTGTCCATAAGGACGTGGGGGGGGAAGTcccccccc > 4:514952/1‑151 (MQ=19) ggACGTGGGGGTTCAAGT‑CCCCCCCCTCGCCCCAAACTAGGCGATATCAAAAAAAGTAAGATGACTGTTGGAAGGTGCCGGAATAGGTAGACTAGCTAGCTGCAGGTGTTAGTGTCAATACGGACGTTGGGGTGGAAGTccaccccaagcc > 1:1070240/1‑146 (MQ=25) gACGTGGGGGTTCAAGT‑CCCCCCCCTCGCACCAAAGGAGGCGAGATCAAAAAAAGTAAGATGACTGTGGGAAGGTGGCGGAATTGGTAGAAGGGCTAGCATCAGGTGTTAGTGTCGTTACGGACGTGGGGGTTGTAGTcaacgccatggcc > 3:289762/1‑139 (MQ=25) ttCAAGT‑CCCCCCCCTCGCACCAAAGGAGGGGATATCAAAAAATGTATGATGAGTGTTGGATGGTGGCGGAATGGGTTGCAGGGGGATCTGCAGGTGTTAGTGTCGTTAGGGCCGGGGGGCTGGTAGGACCCCCCCTGGCCCCAATTAttt > 3:938294/1‑149 (MQ=255) tCAAGT‑CCCCCCCCTCGCACCAAACGAGGGGATATCAAAAAAAGTAAGATGACTGTGGGTAGGTGGCTGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTTCGGACGTGGGGGTTGAAGTCCCCCCCCAGGCCCCaagtgtgtt > 7:1004008/1‑144 (MQ=21) ccccccccTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCCCCAATTATCTTttcttc > 7:376525/1‑151 (MQ=255) cccccccTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCACCCCCAAGCCCCAATTATCTTTACTTcc > 1:605814/1‑151 (MQ=255) ccccccTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGCTAGACGCGCTATCTTCAGGTGTTAGTGTCCTTACGGACGTGGAGGTTAAAGGACCCCCCCTAGCAACAAATATCttaaagtac > 2:1490655/1‑143 (MQ=21) cccccTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTGAAGTCCCCCCCCTCGCACCAATTATCTTTACTTCCtt > 3:726008/1‑151 (MQ=255) ccccTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGGTGAAGGCCCCCCCCGCGCCCCAATTATGTTTACTTCCgtt > 5:62700/1‑151 (MQ=21) ccTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAATTATCTTTACTTCCTTTCt > 4:907825/1‑151 (MQ=255) ccTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTAAAGTCCCCCCCCGCGCCCCAATTATGTTTAATTCCattat > 6:28130/1‑149 (MQ=21) tCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAATTATCTTTACTTCCTTTCTTg > 3:710201/1‑151 (MQ=255) tCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAATTATCTTTACTTCCTTTCTTg > 4:135052/1‑151 (MQ=255) tCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTACAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAATTATCTTTACTTCCTTTCTTg > 2:1189070/1‑151 (MQ=255) gCACCAAACGAGTCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTAAGGACGTGGGGGTTAAACTCCCCCCCCGCGCACCAAATATCATTACTTACTTTCTTGtt > 8:895827/1‑151 (MQ=21) gCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAATTATCTTTACTTCCTTTCTTGtt > 5:500994/1‑151 (MQ=255) gCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGGTCAAGTCCCCCCCCGCGCCCCCATTATCTTTACTTCCTTTCTtttt > 8:23296/1‑151 (MQ=255) cAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCGCGCCCCCATTATCTTTACGTGCTTTCTTGTttctt > 5:53512/1‑151 (MQ=255) aaaCGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAATTATCTTTACTTGCTTTCTtgtttgttg > 6:141319/1‑150 (MQ=255) aaaCGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGGCCCCCCCCTCGCACCAATTATATTTACTTCCTTTCTTGTttattc > 4:1487802/1‑151 (MQ=255) aaaCGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGCTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCACCCCCTCGCACCAAATATCTTTACTTCCTTTCTTGTttcttc > 6:1260209/1‑151 (MQ=255) aaCGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTGAAGTCCCCCCCCGCGCCCCAATTATGTTTTATTACTTTGTTTTTTTTTcc > 3:1541622/1‑151 (MQ=18) aaCGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCGCCCCCGCGCACCAATTATATTTTCATCCTTTGGTGtttggtc > 8:552086/1‑146 (MQ=18) aCGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTGAAGTCCCCCCCCTCGCCCCAATTATCTTTACTTCCTTTCTTGTTTCTTGCt > 6:1334965/1‑151 (MQ=255) cGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCCCCAATTATGTTTACTTCCTTTCTTGTTTGTTCGtt > 4:905813/1‑151 (MQ=255) cGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAATTATCTTTACTTCCTTTCTTGGTTCTTCCtt > 4:320082/1‑151 (MQ=255) gAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCCAGTCCCCCCCCGCGGCCCAATTATCTTTTCTTCCTTTCTTGTTTCTTGCttt > 5:882345/1‑150 (MQ=21) gAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAATTAtggtt > 4:244229/1‑123 (MQ=255) gAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAATTATCttt < 3:242181/127‑1 (MQ=255) gAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAATTATCTTTACTTCCTTTGTTGTTTcttgcttg > 6:1161481/1‑151 (MQ=255) cGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCACGTCACCCCCCTCGCACCAATTATCTTTACTTCCTTTCTTGTTTCTTCCTTGAttt > 2:1102769/1‑151 (MQ=255) cGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCCCCAATTATGTTTACTTCCTTTCTTGTTTGGTCCTTGAttt > 1:988973/1‑151 (MQ=255) | GGGGGTTCAAGTCCCCCCCCTCGCACCAAAAACCACGTTGATATTGCTCGCACTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAATTATCTTTACTTCCTTTCTTGTTTCTTCCTTGATTT > DH1/3906687‑3906987 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |