| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | DH1 | 1,284,869 | G→A | G290S (GGT→AGT) | dapA → | 4‑hydroxy‑tetrahydrodipicolinate synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | DH1 | 1,284,869 | 0 | G | A | 96.4% | 1320.0 / 21.2 | 362 | G290S (GGT→AGT) | dapA | 4‑hydroxy‑tetrahydrodipicolinate synthase |
| Reads supporting (aligned to +/- strand): ref base G (6/7); new base A (151/197); total (158/204) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.28e-01 | |||||||||||
Only 100 of 362 total aligned reads displayed.
CAACAAACTATTTGTCGAACCCAATCCAATCCCGGTGAAATGGGCATGTAAGGAACTGGGTCTTGTGGCGACCGATACGCTGCGCCTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCGGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAGGTTGCGGGTGTTTCGCTTGTTTTATTACTCGCTGCCTGTAGTTCTGACTCACGCTATAAGCGTCAGGTCAGTGGTGATGAAGCC > DH1/1284721‑1285016 | aacaaACTATTTGTCGAACCCAATCCAATCCCGGTGAAATGGGCATGTAAGGAACTGGGTCTTGTGGCGACCGATACGCTGCGCCTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGtt > 2:1471984/1‑151 (MQ=255) aacaaACTATTTGTCGAACCCAATCCAATCCCGGTGAAATGGGCATGTAAGGAACTGGGTCTTGTGGCGACCGATACGCTGCGCCTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGtt > 2:1098486/1‑151 (MQ=255) aacaaACTATTTGTCGAACCCAATCCAATCCCGGTGAAATGGGCATGTAAGGAACTGGGTCTTGTGGCGACCGATACGCTGCGCCTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGtt > 8:1510838/1‑151 (MQ=255) aaCTATTTGTCGAACCCAATCCAATCCCGGTGAAATGGGCATGTAAGGAACTGGGTCTTGTGGCGACCGATACGCTGCGCCTGCCAATGACACCAATCACCGACAGTGGTCGTTAGACGTGAAGAGCGGCGGTAAGGCTTGCAAGTTTGcg > 2:1399339/1‑150 (MQ=255) aCTATTTGTCGAACCCAATCCAATCCCGGTGAAATGGGCATGTAAGGAACTGGGTCTTGTGGCGACCGATACGCTGCGCCTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCGGTTTGCTg > 1:1034260/1‑151 (MQ=255) tttGTCGAACCCAATCCAATCCCGGTGAAATGGGCATGTAAGGAACTGGGTCTTGTGGCGACCGATACGCTGCGCCTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTaa > 4:1159717/1‑150 (MQ=255) ttGTCGAACCCAATCCAATCCCGGTGAAATGGGCATGTAAGCAACTGGGTCTTGTGGCGACCGATACGCTGCGCCTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTaaa < 6:1572888/150‑1 (MQ=255) tGTCGAACCCAATCCAATCCCGGTGAAATGGGCATGTAAGGAACTGGGTCTTGTGGCGACCGATACGCTGCGCCTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAg < 3:246439/150‑1 (MQ=255) tGTCGAACCCAATCCAATCCCGGTGAAATGGGCATGTAAGGAACTGGGTCTTGTGGCGACCGATACGCTGCGCCTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGt > 8:1125363/1‑151 (MQ=255) gTCGAACCCAATCCAATCCCGGTGAAATGGGCATGTAAGGAACTGGGTCTTGTGGCGACCGATACGCTGCGCCTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGtt < 1:355197/151‑1 (MQ=255) gcGAACCCAATCCAATCCCGGTGAAATGGGCATGTAAGGAACTGGGTCTTGTGGCGACCGATACGCTGCGCCTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGttt < 7:1025775/150‑1 (MQ=255) cGAACCCAATCCAATCCCGGTGAAATGGGCATGTAAGGAACTGGGTCTTGTGGCGCCCGATACGCTGCGCCTGCCAATGCCCCCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCGTAAGCATGCCAGTTTGCTGTAAAGttt > 3:1500459/1‑150 (MQ=255) cGAACCCAATCCAATCCCGGTGAAATGGGCATGTAAGGAACTGGGTCTTGTGGCGACCGATACGCTGCGCCTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTa < 1:1155805/151‑1 (MQ=255) cGAACCCAATCCAATCCCGGTGAAATGGGCATGTAAGGAACTGGGTCTTGTGGCGACCGATACGCTGCGCCTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTa < 6:1439303/151‑1 (MQ=255) gAACCCAATCCAATCCCGGTGAAATGGGCATGTAAGGAACTGGGTCTTGTGGCGACCGATACGCTGCGCCTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGtat > 4:799491/1‑147 (MQ=255) cccAATCCAATCCCGGTGAAATGGGCATGTAAGGAACTGGGTCTTGTGGCGACCGATACGCTGCGCCTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAggg > 8:322263/1‑150 (MQ=255) cccAATCCAATCCCGGTGAAATGGGCATGTAAGGAACTGGGTCTTGTGGCGACCGATACGCTGCGCCTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAggg > 8:826973/1‑150 (MQ=255) ccaatccaatCCCGGTGAAATGGGCATGTAAGGAACTGGGTCTTGTGGCGACCGATACGCTGCGCCTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGgag < 3:394869/151‑1 (MQ=255) ccaatccaatCCCGGTGAAATGGGCATGTAAGGAACTGGGTCTTGTGGCGACCGATACGCTGCGCCTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGATTAggg > 7:230812/1‑149 (MQ=255) aatccaatccCGGTGAAATGGGCATGTAAGGAACTGGGTCTTGTGGCGACCGATACGCTGCGCCTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGAt < 1:520847/151‑1 (MQ=255) ccaatccCGGTGAAATGGGCATGTAAGGAACTGGGTCTTGTGGCGACCGATACGCTGCGCCTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTg < 5:313875/151‑1 (MQ=255) caatccCGGTGAAATGGGCATGTAAGGAACTGGGTCTTGTGGCGACCGATACGCTGCGCCTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGa < 7:175453/151‑1 (MQ=255) aatccCGGTGAAATGGGCATGTAAGGAACTGGGGCTTGTGGCGACCGATACGCTGCGCCTGCCAATGACAGCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCGTAAGCATGCAAGTTTGCTGTAAAGTTTAGGGAGATTTGAt < 7:1326471/151‑1 (MQ=255) atccCGGTGAAATGGGCATGTAAGGAACTGGGTCTTGTGGCGACCGATACGCTGCGCCTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATg > 5:390954/1‑151 (MQ=255) cccGGTGAAATGGGCATGTAAGGAACTGGGTCTTGTGGCGCCCGATACGCTGCGCCTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGc > 8:567965/1‑151 (MQ=255) gTGAAATGGGCATGTAAGGAACTGGGTCTTGTGGCGACCGATACGCTGCGCCTGCCTATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTAc > 6:1108331/1‑151 (MQ=255) gTGAAATGGGCATGTAAGGAACTGGGTCTTGTGGCGACCGATACGCTGCGCCTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTAc < 7:1496649/151‑1 (MQ=255) gAAATGGGCATGTAAGGAACTGGGTCTTGTGGCGACCGATACGCTGCGCCTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTActc > 1:6972/1‑151 (MQ=255) aaaTGGGCATGTAAGGAACTGGGTCTTGTGGCGACCGATACGCTGCGCCTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTActct < 4:1015733/151‑1 (MQ=255) aaaTGGGCATGTAACGAACTGGGTCTTGTGGCGACCGATACGCTGCGCCTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTActc < 4:872002/150‑1 (MQ=255) aaTGGGCATGTAAGGAACTGGGTCTTGTGGCGACCGATACGCTGCGCCTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTg > 4:1516774/1‑151 (MQ=255) aaTGGGCATGTAAGGAACTGGGTCTTGTGGCGACCGATACGCTGCGCCTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTg > 2:1524179/1‑151 (MQ=255) aaTGGCCATGTAAGGAACTGGGTCTTGTGGCGCCCGATACGCTGCGCCTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCATAAGCATGCGAGTTAGCTGTAAAGTTTAGGGAGATATGATGGAGTACTCTg > 6:683039/1‑151 (MQ=255) gggCATGTAAGGAACTGGGTCTTGTGGCGACCGATACGCTGCGCCTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGtt < 8:798462/150‑1 (MQ=255) aTGTAAGGAACTGGGTCTTGTGGCGACCGATACGCTGCGCCTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCaaa > 2:1222109/1‑150 (MQ=255) gTAAGGAACTGGGTCTTGTGGCGACCGATACGCTGCGCCTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCGGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGt > 8:1070708/1‑151 (MQ=255) aaGGAACTGGGTCTTGTGGCGACCGATACGCTGCGCCTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGTcg < 2:452200/151‑1 (MQ=255) aaCTGGGTCTTGTGGCGACCGATACGCTGCGCCTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGcc > 5:174698/1‑151 (MQ=255) ggggCTTGTGGCGACCGATACGCTGCGCCTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGTTGGCTTACTCTGTTCAAAAGTCGCGCCTg < 8:1214358/149‑1 (MQ=255) gggTCTTGTGGCGACCGATACGCTGCGCCTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTgg < 7:446296/150‑1 (MQ=255) tCTTGTGGCGACCGATACGCTGCGCCTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGCCt < 4:197361/145‑1 (MQ=255) gcTTGTGGCGACCGATACGCTGCGCCTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCaaa < 7:593111/150‑1 (MQ=255) gcTTGTGGCGACCGATACGCTGCGCCTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATGTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCaaa < 7:1244960/150‑1 (MQ=255) tgtgGCGACCGATACGCTGCGCCTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAgg < 6:493050/150‑1 (MQ=255) tgtgGCGACCGATACGCTGCGCCTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAgg < 1:120392/150‑1 (MQ=255) tgtgGCGACCGATACGCTGCGCCTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAg < 5:15171/149‑1 (MQ=255) tgGCGACCGATACGCTGCGCCTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAGGTTg > 5:1247495/1‑151 (MQ=255) ggCGACGGTTACGCTGCGGCGGCCAATGACAGCAATCAGCGAGAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAGGTTGc < 2:313797/151‑1 (MQ=255) ggCGACCGATACGCTGCGCCTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAGGTTg < 6:1553669/150‑1 (MQ=255) gACCGATACGCTGCGCCTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGCCGCTTAAGCATGCGAGTTTCCTGTAAAGTTTAGTGAGATTTGATGGCTTACTCTGTTCAAAACTCGCGCCTGGCAAAGGTTGCggg > 7:958370/1‑151 (MQ=255) ccGATACGCTGCGCCTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGAGTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAGGTTGCGGgtg < 1:899772/151‑1 (MQ=255) cGATACGCTGCGCCTTCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAGGTTGCGGgtgt < 1:797191/151‑1 (MQ=255) aCGCTGCGCCTGGCAATGACACCAATCAGCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAGGTTGCGGGTGTTTc < 6:136318/150‑1 (MQ=255) aCGCTGCGCCTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAGGTTGCGGGTGTTTc < 1:1509920/150‑1 (MQ=255) aCGCTGCGCCTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAGGTTGCGGGTGTTTCg < 5:1297144/151‑1 (MQ=255) tGCGCCTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAGGTTGCGGGTGTTTCGCTTg > 8:916570/1‑151 (MQ=255) gcgcCTGCCAATGACACCAATCACCGACAGGGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAGGTTGCGGGTGTTTCGCtt < 4:330144/149‑1 (MQ=255) gcCTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAGGTTGCGGGTGTTTCGCTTGttt > 6:611840/1‑151 (MQ=255) ccTGCCAATGACACCTAGCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAGGTTGCGGGTGTTTCGCTTGtttt < 2:618187/151‑1 (MQ=255) cTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAGGTTGCGGGTGTTTCGCTTGtttt > 8:1310973/1‑150 (MQ=255) cTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAGGTTGCGGGTGTTTCGCTTGtttt > 3:1163636/1‑150 (MQ=255) gCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAGGTTGCGGGTGTTTCGCTTGTTttatt < 8:212666/151‑1 (MQ=255) gCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTACGGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAGGTTGCGGGTGTTTCGCTTGTTttatt < 6:1283603/151‑1 (MQ=255) ccAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCGGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAGGTTGCGGGTGTTTCGCTTGTTttatta < 2:1322558/151‑1 (MQ=255) ccAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAGGTTGCGGGTGTTTCGCTTGTTttatta < 2:947441/151‑1 (MQ=255) ccAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAGGTTGCGGGTGTTTCGCTTGTTttatta < 6:923829/151‑1 (MQ=255) cAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAGGTTGCGGGTGTTTCGCTTGTTTTATTAc < 8:441485/151‑1 (MQ=255) aaTGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAGGTTGCGGGTGTTTCGCTTGTTTTATTACt > 5:1093315/1‑151 (MQ=255) tGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAGGTTGCGGGTGTTTCGCTTGTTTTATTACTCg > 4:98786/1‑151 (MQ=255) acacCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGCTGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAGGTTGCGGGTGTTTCGCTTGTTTTATTACTCGCt < 3:1380331/151‑1 (MQ=255) aaTCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAGGTTGCGGGTGTTTCGCTTGTTTTATTACTCGCTGCCTg < 5:629634/151‑1 (MQ=255) cACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCGGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAGGTTGCGGGTGTTTCGCTTGTTTTATTACTCGCTGCCTGTAg < 2:1044743/151‑1 (MQ=255) ccGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGTTTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCTAAGGTTGCGGGTGTTTCGCTTGTTTTATTACTCGCTGCCTGTAGtt < 1:711211/151‑1 (MQ=255) gACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAGGTTGCGGGTGTTTCGCTTGTTTTATTACTCGCTGCCTGTAGTTCt > 8:645466/1‑151 (MQ=255) aCAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCCGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAGGTTGCGGGTGTTTCGCTTGTTTTATTACTCGCTGCCTGTAGTTCTg > 5:776278/1‑151 (MQ=255) aGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAGGTTGCGGGTGTTTCGCTTGTTTTATTACTCGCTGCCTGTAGTTCTGAc > 2:846471/1‑151 (MQ=255) gTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAGGTTGCGGGTGTTTCGCTTGTTTTATTACTCGCTGCCTGTAGTTCTGACt > 4:284346/1‑151 (MQ=255) cGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAGGTTGCGGGTGTTTCGCTTGTTTTATTACTCGCTGCCTGTAGTTCTGACTCACg < 6:799303/150‑1 (MQ=255) gTGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAGGTTGCGGGTGTTTCGCTTGTTTTATTACTCGCTGCCTGTAGTTCTGACTCACGCt > 1:931980/1‑151 (MQ=255) tGAGACGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAGGTTGCGGGTGTTTCGCTTGTTTTATTACTCGCTGCCTGTAGTTCTGACTCACGCt > 7:557920/1‑150 (MQ=255) agaCGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAGGTTGCGGGTGTTTCGCTTGTTTTATTACTCGCTGCCTGTAGTTCTGACTCACGCtata < 1:1318625/151‑1 (MQ=255) aCGGTCAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAGGTTGCGGGTGTTTCGCTTGTTTTATTACTCGCTGCCTGTAGTTCTGACTCACGCTATAAg < 3:1015907/151‑1 (MQ=255) ggTCAGAGCGGCGCTTAAGCATGCCGGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAGGTTGCGGGTGTTTCGCTTGTTTTATTACTCGCTGCCTGTAGTTCTGACTCACGCTATAAGCg < 5:1165463/151‑1 (MQ=255) cAGAGCGTCGGTTTAGCATGCCAGTTTGCTGTATATTTTAGGGAGATTTGATGGCTTACTCTGTTCTAAAGTCGCGCCTGGCAAAGGTTGCGGGTGTTTCGCTTGTTTTATTACTCGCTGCCTGTAGTTCTGACTCACGCTATAAGCgtc < 6:244614/150‑1 (MQ=255) cAGAGCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAGGTTGCGGGTGTTTCGCTTGTTTTATTACTCGCTGCCTGTAGTTCTGACTCACGCTATAAGCgtc < 7:320391/150‑1 (MQ=255) agagCGGCGCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTCGCAAAGGATGCGGGTGTTTCGCTTGTTTTATTACTCGCTGCCTGTAGTTCTGACTCAAGCTATAAGCgtc > 2:786331/1‑149 (MQ=255) agCGGCGCTTAAGCATGCCAGTTTCCTGTAAAGTTTAGCGAGATATGATGGCTAACTCTCTTCAAAAGTCGCGCCTCGCAAACGTTGCCCGTGTATCGCTAGTTTAATAACACGCAGCCAGTAGTTCTGACTCACGCTATAAGCgtcacg > 4:1297535/1‑148 (MQ=255) gcggcgCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAGGTTGCGGGTGTTTCGCTTGTTTTATTACTCGCTGCCTGTAGTTCTGACTCACGCTATAAGCgtcaggtc > 8:1414718/1‑151 (MQ=255) ggcgCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAGGTTGCGGGTGTTTCGCTTGTTTTATTACTCGCTGCCTGTAGTTCTGACTCACGCTATAAGCgtcaggtcag < 7:1140290/151‑1 (MQ=255) ggcgCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAGGTTGCGGGTGTTTCGCTTGTTTTATTACTCGCTGCCTGTAGTTCTGACTCACGCTATAAGCgtcaggtcag < 3:1070458/151‑1 (MQ=255) ggcgCTTAAGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAGGTTGCGGGTGTTTCGCTTGTTTTATTACTCGCTGCCTGTAGTTCTGACTCACGCTATAAGCgtcaggtc > 4:606195/1‑149 (MQ=255) cgcTTAAGTATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAGGTTGCGGGTGTTTCGCTTGTTTTATTACTCGCTGCCTGTAGTTCTGACTCACGCTATAAGCGTCAGGTCAgtg < 6:338265/151‑1 (MQ=255) tAAGCATGCCAGTTTGCTGTAAAGTTTAGTGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAGGTTGCGGGTGTTTCGCTTGTTTTATTACTCGCTGCCTGTAGTTCTGACTCACGCTATAAGCGTCAGGTCAgtggtg < 3:794550/150‑1 (MQ=255) tAAGCATGCCAGGTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAGGTTGCGGGTGTTTCGCTTGTTTTATTACTCGCTGCCTGTAGTTCTGACTCACGCTATAAGCGTCAGGTCAgtggtg < 3:555804/150‑1 (MQ=255) aaGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAGGTTGCGGGTGTTTCGCTTGTTTTATTACTCGCTGCCTGTAGTTCTGACTCACGCTATAAGCGTCAGGTCAGTGGtgat > 5:876213/1‑151 (MQ=255) aGCATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAGGTTGCGGGTGTTTCGCTTGTTTTATTACTCGCTGCCTGTAGTTCTGACTCACGCTATAAGCGTCAGGTCAGTGGtgatg > 8:1009400/1‑151 (MQ=255) cATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAGGTTGCGGGTGTTTCGCTTGTTTTATTACTCGCTGCCTGTAGTTCTGACTCACGCTATAAGCGTCAGGTCAGTGGtgatga > 8:261227/1‑150 (MQ=255) cATGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAGGTTGCGGGTGTTTCGCTTGTTTTATTACTCGCTGCCTGTAGTTCTGACTCACGCTATAAGCGTCAGGTCAGTGGTGATGaa < 1:986916/151‑1 (MQ=255) tGCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAGGTTGCGGGTGTTTCGCTTGTTTTATTACTCGCTGCCTGTAGTTCTGACTCACGCTATAAGCGTCAGGTCAGTGGTGATGAAGc > 4:45987/1‑151 (MQ=255) gCCAGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAGGTTGCGGGTGTTTCGCTTGTTTTATTACTCGCTGCCTGTAGTTCTGACTCACGCTATAAGCGTCAGGTCAGTGGTGATGAAGcc > 4:421748/1‑151 (MQ=255) | CAACAAACTATTTGTCGAACCCAATCCAATCCCGGTGAAATGGGCATGTAAGGAACTGGGTCTTGTGGCGACCGATACGCTGCGCCTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCGGTTTGCTGTAAAGTTTAGGGAGATTTGATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAGGTTGCGGGTGTTTCGCTTGTTTTATTACTCGCTGCCTGTAGTTCTGACTCACGCTATAAGCGTCAGGTCAGTGGTGATGAAGCC > DH1/1284721‑1285016 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |