Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*DH12,169,5480GT30.8% 286.6 / 45.3 157P671Q (CCG→CAG) rsxCelectron transporter RsxC
Reads supporting (aligned to +/- strand):  ref base G (19/89);  new base T (13/35);  total (33/124)
Fisher's exact test for biased strand distribution p-value = 2.00e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 160 total aligned reads displayed.

GCGGCAACTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAAT‑AGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCG  >  DH1/2169398‑2169697
                                                                                                                                                       |                                                                                                                                                     
 cgGCAACTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAAT‑AGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCgg                                                                                                                                                      <  1:35926/151‑1 (MQ=255)
 cgGCAACTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAAT‑AGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCgg                                                                                                                                                      <  6:505874/151‑1 (MQ=255)
      aCTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAAT‑AGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCt                                                                                                                                                 <  5:486207/151‑1 (MQ=255)
      aCTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTACCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAAT‑AGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCt                                                                                                                                                 <  5:1125748/151‑1 (MQ=255)
         gCCGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAAT‑AGCCGCTTCGACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGtt                                                                                                                                              <  2:879913/151‑1 (MQ=255)
         gCCGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAAT‑AGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGt                                                                                                                                               <  5:925995/150‑1 (MQ=255)
          ccGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAAT‑AGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTc                                                                                                                                             <  8:399784/151‑1 (MQ=255)
           cGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATAAAACGGATGCTCTTCCAGATTGCTAACATTGTCACGAGAAAT‑ATAGGCTTCGCCGGCAGCTTTGCGCTGAAAAAACTGTTCGTCTGGATCCGCATAGGGCGGATGCGGTTcg                                                                                                                                            >  4:1257985/1‑150 (MQ=9)
            gCTTTGCGCGGATCAACGTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTGCCAGCTTGCGTGCTTTGGCGCGTGCAAT‑AGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTccc                                                                                                                                           <  8:1094384/151‑1 (MQ=255)
            gCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAAT‑AGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTccc                                                                                                                                           <  7:920454/151‑1 (MQ=255)
             cTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGATCTCGTAACAGCAAACGTGTTTACTCCAGT‑CACTAATCCGCATCGACGGAAGCTTTGGGCGGATCAAACTCTTCTTCTGGGTCGGCTTTTGCGGGtgggggggcggg                                                                                                                                          >  3:1051551/1‑140 (MQ=255)
               ttGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAAT‑AGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGt                                                                                                                                         <  7:388064/150‑1 (MQ=255)
                 gcgcGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAAT‑AGCCGCTTCTACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGttt                                                                                                                                       <  3:1077382/150‑1 (MQ=255)
                  ggcgGAGGAACGTGGTCTTCTGGGACCGGTTTAGCCTGTTGCTGTTCCTGCTTGGGTGCTTTTGCGCGTGCAAT‑AGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTgc                                                                                                                                     <  1:87031/150‑1 (MQ=25)
                    gggATCAACCTGTTCTTCTGCTACCGCATTAGCCTGTTGCTGGTCCAGCTTGCGTGCTTTGGCGCGTGCAAT‑AGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTgcgc                                                                                                                                   <  8:264282/150‑1 (MQ=255)
                     ggATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAAT‑AGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGATGTTCCAGGTTgcg                                                                                                                                    >  8:33678/1‑149 (MQ=255)
                      gATCAACCTGGTCTTCTGGTACCGCATTAGCCTGTTGCTGTGCCAGCTTGCGTGCGTTGGCGCGTGCAAT‑AGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTgcgcgc                                                                                                                                 <  3:793222/151‑1 (MQ=255)
                         cAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGGTCGAGCTTGCGTGCTTTGGCGCGTGCAAT‑AGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCtt                                                                                                                               <  2:359603/150‑1 (MQ=255)
                         cAACCTGTTCTTCTGGTACCGCATTAGACTTTTGATGATCCAGCTTGAGAGCTGTGGGGAGTGAAAT‑AGCGGCTTCGACGGCTGCTTTGCGGGGATAAACCTGTTCTTGTGGGTCCGCGTTAGCGGGGGGCGGTTcgggggtgggggctgg                                                                                                                              >  5:1181941/1‑136 (MQ=255)
                         aaaCCTGTTCTTCTGGTACCGCATTAGCCTGGTGCTGTTCGAGCTTGCGTGCTTTGGCGCGTGCAAT‑AGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCttt                                                                                                                              <  5:68668/150‑1 (MQ=255)
                          aaggagTTCTTCTGGTACCGCATTAGACTGATGCTGTGCGAGCTTGCGTGCTTTGGCGCGTGCAAT‑AGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTg                                                                                                                             <  1:782816/146‑1 (MQ=37)
                          aaCCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAAT‑AGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTg                                                                                                                             <  5:502181/151‑1 (MQ=255)
                              tGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCTCGTGCAAT‑AGCCGCTTCGACGGCAGATATGCGCAGATCAAACTGTTCTAATCGCTACGCATTAGCATGATGATGTTCAAGTTTCCGAGATTTgaaa                                                                                                                          >  8:1149094/1‑147 (MQ=14)
                               gTTCTTCTGGTACCGCATTAGCCTGGTGCTGTTCCAGCTTGCGTGCGTTGGCGCGTGCAAT‑AGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCg                                                                                                                        <  5:824707/151‑1 (MQ=255)
                               gTTCTTATGGTACGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAAT‑AGCCGCGTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTc                                                                                                                         <  6:1076978/150‑1 (MQ=255)
                                gtcttctGGCCCCGCATTAGCCTGTTGCTGTGCCAGCTGGCGGGCGTTCGCGCGTGCAAT‑AGCCGCTCCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCgg                                                                                                                       <  2:1133588/150‑1 (MQ=17)
                                     gttgttcggctttAGCCTGTTGCTGTTCCTGCTTGACTGCTTTGGCGCGTGCAAT‑AGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAAt                                                                                                                  <  4:377440/140‑1 (MQ=25)
                                       tggccggCATAAGCCTGGTGCTGGTCCAGCTGGGGTGCTTGGGCGCGTGCAAT‑AGCCGCTTCGACGGCAGCTTTGCGCGGATGAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCGCGTTTGCGCGCTTTGGCTCGGGCAATa                                                                                                                 <  2:973762/144‑1 (MQ=255)
                                       ggTACCGCATTAGCCTTGTGCTGTTCGAGCTTGCGTGCTTTTGCGCGTGCAAT‑AGCCGCTTCTACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCaa                                                                                                                   <  2:824335/148‑1 (MQ=255)
                                       ggTACCGCATTAGCCTGGTGCTGTTCCAGCTTGCGTGCTTTGGCGCGGGCAAT‑AGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATa                                                                                                                 <  4:77284/150‑1 (MQ=255)
                                         tACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGGGCTTTGGCCCGTGCGAT‑GCCCGCTACGAGGCCCGCGATTCGCTTATGCACCTGGGCTTCTGCCTCCGCATTTGCCTGATCCTGTTCCCGGTTGCGCGCTTTGGcggggggcatcggg                                                                                                              >  3:205616/1‑138 (MQ=9)
                                            gtcATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTTCAAT‑AGCCTCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCTCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCt                                                                                                           <  2:189083/149‑1 (MQ=255)
                                             gCATTAGCCTTTTGCTGTTCGAGCTTGAGTGCTTGTGCGCGTGCAAT‑AGCCTCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCTCATTAGCCGTTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCtt                                                                                                          <  2:254050/151‑1 (MQ=25)
                                             gCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCGTTGGCGCGTGCAAT‑AGCCGCTTCTACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCtt                                                                                                          <  3:729631/151‑1 (MQ=255)
                                               aTTAGCCTGGTGCTGTTCCAGCTTGCGTGCTTTCGCGCGTGCAAT‑AGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCg                                                                                                        <  8:786031/151‑1 (MQ=255)
                                                  aGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAAT‑AGCCGCTGCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAcg                                                                                                     <  1:1279256/151‑1 (MQ=255)
                                                   gCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAAT‑AGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAcgg                                                                                                    <  3:456247/151‑1 (MQ=255)
                                                    ccTGGTGCTGTTCCAGCTTGCGTGCGTTGGCGCGTGCAAT‑AGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAcggc                                                                                                   <  5:72841/151‑1 (MQ=255)
                                                      tGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAAT‑AGCCGCTTCGACGGCAGCTTTGCGCGGATCCACCTGTTCTTCTGGCTCAGCATTAGCCTGTTGCTGGTCCCGATTGCGCCCGTTGGCTCGGGCAATAGCGGCTTCGAcggcgg                                                                                                 >  7:1144365/1‑151 (MQ=14)
                                                      tGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAAT‑AGCAGCTTCGACGGCAGATTTACGAGGATCAACAACGTGTTCTGGGTCCTAATTATCCTGAAGATGTTCCAGTTAGATCGCTTTAGCGAGGGCTATAgatacatagacggcct                                                                                                 >  4:980026/1‑136 (MQ=2)
                                                       ggtGCTGTTCCAGCTTGCGTGCTTTCGCGCGTGCAAT‑AGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAcggcg                                                                                                  <  5:273103/147‑1 (MQ=255)
                                                       ggtGCTGGGCCAGCTTGCGTGCGTTGGCGCGTGCAAT‑AGCCGCTGCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACggcggc                                                                                                <  3:285401/149‑1 (MQ=255)
                                                       gTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAAT‑AGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAcggcgg                                                                                                 <  7:957388/150‑1 (MQ=255)
                                                          gCTGTGCCCGCTTGAGTGCTTTCGCGCGGGCAAT‑AGCCGCTGCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCttt                                                                                             <  4:222632/151‑1 (MQ=17)
                                                            tGTTCCAGCTTGCGTGCTTTGGCGCGTGCAAT‑AGCGGCTTCGACGGCAGGTTTGAGAGCGGAAGCGGGGTCTTCTGCATCCGCGTGAGACTGGGGCTGGTCCGGGTTGCGCGCGTGGGCGCGTGCAATAGCGGGTTGGGgggcggggttgg                                                                                           >  1:814768/1‑145 (MQ=2)
                                                             ggtCCAGCTTGCTTGCTTTGGCGCGTGCAAT‑AGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTg                                                                                            <  7:688398/147‑1 (MQ=255)
                                                             gTTCCAGCTTTGGGGCTNTGGCGCGTGCAAT‑AGCCGCGGCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGGTCCCGGTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTgcg                                                                                          <  5:780682/151‑1 (MQ=17)
                                                               tCCAGCTTGCGTGCTTTGGCGCGTGCAAT‑AGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTgcgc                                                                                         <  5:159764/150‑1 (MQ=255)
                                                                ccAGCTTGCGTGCTTTGGCGCGTGCAAT‑AGCCGCTGCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGGTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGcgcg                                                                                        <  7:236180/150‑1 (MQ=255)
                                                                   ggttGCGGGCGTTGGCGCGTGCAAT‑AGCCGCTGCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATc                                                                                    <  1:731854/149‑1 (MQ=255)
                                                                   gCTTGCGGGCCTTGGCGCGTGCAAT‑AGCCGCTGCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCGCGGGCTATAGCGGCTTCGACGGCGGCTTTGCGCGGATc                                                                                    <  2:545680/151‑1 (MQ=255)
                                                                   gCTTGCGGGCCTTGGCGCGGGCAAT‑AGCCGCTGCTACGGCAGCTTTGCGCGGAGCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGGTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATc                                                                                    <  8:886664/151‑1 (MQ=14)
                                                                    gttGCGGGCTTTGGCGCGTGCAAT‑AGCCGCGGCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGGATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCg                                                                                   <  5:261056/150‑1 (MQ=17)
                                                                     ttGCGTGCTTTGGCGCGTGCAAT‑AGCCGCTTCGAAGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGGTTGAGAGATTTGGCACGGGCAATAGCGGCTTCGAAGGGGGGttggggggggtggc                                                                                  >  4:434320/1‑139 (MQ=14)
                                                                      tGCGTGCTTTGGCGCGTGCAAT‑AGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCGCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGa                                                                                  <  7:317147/150‑1 (MQ=255)
                                                                       gCGGGCGTTGGCGCGTGCAAT‑AGCCGCGGCCACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATGGCGGCTTCGACGGCGGCTTTGCGCGGATCGAc                                                                                 <  3:498502/150‑1 (MQ=17)
                                                                        cgggcgttGGCGCGTGCAAT‑AGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCt                                                                               <  7:1044184/145‑1 (MQ=255)
                                                                        cGTGCGTTGGCGCGTGCAAT‑AGCCGCTGCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCt                                                                               <  5:176031/151‑1 (MQ=255)
                                                                         gttccgaggCGCGGGCAAT‑AGCCGCTTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGTCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGTGCTTTTGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCtg                                                                              <  6:1126735/144‑1 (MQ=14)
                                                                          ggcctgggCGCGTGCAAT‑AGCCGCTTCCACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGGGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCtgt                                                                             <  3:820946/145‑1 (MQ=255)
                                                                           gcgtttgcgcGGGCAAT‑AGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGGTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCtgtt                                                                            <  4:83065/145‑1 (MQ=255)
                                                                           gCTTTGGCGCGTGCAAT‑AGCCGCTTCGACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCtgtt                                                                            <  1:577313/151‑1 (MQ=255)
                                                                            cgttGGCGCGTGCAAT‑AGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCtgttg                                                                           <  5:580951/149‑1 (MQ=255)
                                                                              gtGGCGCGTGCAAT‑AGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCtgttg                                                                           <  7:507971/148‑1 (MQ=255)
                                                                                ggctcggtcatt‑AGCCGGTGCTACTGCAGCTGTGCGCTGAGCTAGCCGTTGTTCTGGCTCCTGATTAGCCTGGTGCTGGTCCCGTTTGGTGGCTTTAGCTCGGGCAATAGCGGCTTCTACTGCGGCTTTGCGCGGATCGACCTGTTGTTCt                                                                       <  5:97992/140‑1 (MQ=2)
                                                                                ggCGCGGGCATT‑AGCAGCTTCTACTGCTGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTTCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCt                                                                       <  6:24150/151‑1 (MQ=14)
                                                                                ggCGCGGGCAAT‑AGCCGCGGCGACTGCAGCTTTGCGCGGATCAACCTGATCTTCTGGCTCCGCATTAGCCGGTTGCTGGTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTc                                                                        <  2:475460/150‑1 (MQ=17)
                                                                                 gcgcGGGCAAT‑AGCAGCGGCAACTGCAGCGTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCAATAGCCGGGTGCTGTTCCCGTTTGCGCGCTTGGGCGCGGGCAATAGCGGCTTCGACTGCGGCTTTGCGCGGATCGACCTGTTGTTCt                                                                       <  6:1292077/150‑1 (MQ=14)
                                                                                    cgTGCAAT‑AGCCGCTTCTACTGCAGCTTTGCGCTGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGGTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCt                                                                   <  4:583283/151‑1 (MQ=255)
                                                                                             aGCCGCTGCCACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCACCGCATTAGCCGGTTGCTGTTCCGGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCTACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTa                                                           <  2:1233657/151‑1 (MQ=17)
                                                                                                 gcggcGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCt                                                       <  7:571368/147‑1 (MQ=255)
                                                                                                        atgCAGCTTTGCGCTGATCCACCTGTTCTTCTGGCTCCTCATTAGCCTGTTGCTGTTCCCGTTTTCGGGCTTTGGCGCGGGCAATAGCCGCTGCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTg                                                <  2:1038802/149‑1 (MQ=14)
                                                                                                         ggCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGGTGCTGTTCGCGTTTGCGCGCTTTCGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGt                                               <  5:594585/151‑1 (MQ=255)
                                                                                                          gctgCTTTGCGCGGATCCACCTGGTCTTCTGGCTCCGCTTTATCCGGGTGCTGTTCCCGTTTGCGGGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTg                                                <  8:88745/146‑1 (MQ=14)
                                                                                                          gccgcgttccggtgATCTACCTCTTCTTCTGGCTCCGCTTTAGCCTGTTGCTGGTCCCGTTTGCGGGCTTTCGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGtt                                              <  8:735786/138‑1 (MQ=14)
                                                                                                          gCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTTGCCTGGTGCTGGTCGCGTTTGCGGGCTTTGGCGCGGGCAATAGCGGCGTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTg                                                <  8:839246/149‑1 (MQ=14)
                                                                                                             gCTTTCCGAGGATCAACCTGGTCTTCTGGCTCCGCATTAGCCTGCTGCTGTTCCCGTTTGCGCGCGTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCa                                           <  3:821524/151‑1 (MQ=14)
                                                                                                                ttGCGGGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGGTGCTGTTCGCGTTTGCGCGCTTTTGCGCGGGCAATAGCGGCTTCTACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGc                                         <  1:166733/150‑1 (MQ=14)
                                                                                                                ttGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGATTGCGCGCTTTGGCTCGGGCAATAGCTGCTTCAACGGCAGATTTACGTGGATCAGCATCTGTTTCTGGGTCGTAATTATCCTgaagatcttcc                                            >  6:629666/1‑137 (MQ=9)
                                                                                                                 tgcggtgATCATCCTGTTCTTCTGGCTGCGCAATAGCCTGGTTCTTTTCCCGTTTTCGCTTTTGTGCGCGGGCAATAGCGGCTTCTACTGCCGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGca                                        <  4:375127/144‑2 (MQ=9)
                                                                                                                 tGCGCTTATCTACCTGCTCTTCTGGCCCCGCATTAGGCGCATTATGGTCCCGAGTGCCGCCGTGGGCTCTTCCTATAGCGGCTTCGACGGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCt                                        <  1:1036563/150‑1 (MQ=2)
                                                                                                                  gcgcTGATCCACCTGTTCTTCTGGCTCCTCATTATCCTGTTGCTGTGCGCGTTTGCTGGCTTTTGCTCGGGCAATAGCGGCTTCTACTGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTg                                      <  8:306131/151‑1 (MQ=14)
                                                                                                                   cgcgGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCAGCTTGCGCACTTAGGAACCGCAAAGGTATGCTAGGCAGTCCGATATGCGCGGCTCGACGTGGGGTTCTGGCTCGGCATTAGACTGTTGCTGTGCCCGGTTgg                                     >  7:699149/1‑150 (MQ=9)
                                                                                                                        atcttgcTGTTCTTCTGGCTCCGCATTTGTCTGTTGCTGTTCGGCTTTTTTGGCGTTTGCGCGGGCAATAGCGGCTTCTACGGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGc                                 <  6:934219/144‑1 (MQ=14)
                                                                                                                             ccTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCGCGGGCGATAGCTGCtt                                                                                                          >  2:55977/1‑72 (MQ=14)
                                                                                                                              cTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGGCGAGTAGTTCTGCCTCTCGGAAATCCTGTTGCTGATCCAGCTTGCGTGCTTTGGc                           >  7:825470/1‑150 (MQ=14)
                                                                                                                                     tctGGGGCCGCATTAGCGGGTGGCTGGTCCCGTTTGCTGGCGTTGGCGCGGGCAATAGCCGCTTCGACTGCGGCTTTGCGCGGATCCACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGc                     <  3:440281/149‑1 (MQ=14)
                                                                                                                                     tatgccTCCGCAATAGCCTGGTGCTGTGCCCCTTTGGTCGCGTGTGCTCGGGCAATAGCCGCTTCGACGGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGGTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCa                    <  5:1036798/145‑1 (MQ=14)
                                                                                                                                      gtgagcccGCATTAGCCGCTTCCTCTTCCCGTATCCGAGCTTTTTCTGTTGTAATAGCGGCTTCTACTGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAAt                  <  4:395420/145‑1 (MQ=14)
                                                                                                                                       tGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCtgt                                                                             >  6:1150235/1‑91 (MQ=255)
                                                                                                                                        ggCTCCGGATCAGCCTTGTGCTGGGCGCGTTTGTTGGCTTGTGCGCGGGCAATAGCCGCGTCGACTGCCGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAAt                  <  4:1097613/149‑1 (MQ=11)
                                                                                                                                        ggCTCCGCATTCCGCTGTTGGTGGTCGAGTTGGCGCGCTTGGGCTCGCGCACTAGCCGCTTCTACGGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAg                <  7:679354/151‑1 (MQ=14)
                                                                                                                                        ggCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTCTTGTTCTGGCTCGGCATTAGCCTGTAGATGTTCCAGATTGCCTGCTTTGGCACGGGAAAt                  >  8:940608/1‑149 (MQ=17)
                                                                                                                                         gCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCGATAGCTGCTTCCACGGCAGGTTTACGGGGATccgcaacg                                                                             >  1:1105374/1‑82 (MQ=255)
                                                                                                                                            ccGCAAGAGCCGGGTGCTGGTCCCGTTTGCGGGCGTGCGCGCGGGCAATAGCGGCTGCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGc            <  5:404341/151‑1 (MQ=14)
                                                                                                                                             cGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCGATAGCTGCTTCGACGGCGGATGTGATCCGCTCGCGGGGGAGGTCGCGTTCCTAATTAGCCTGTTGGTGTTCCAGCTTGCGTGCTATCTAAAGGGCGATAGCGGcg           >  3:287125/1‑150 (MQ=255)
                                                                                                                                                 atAGCCTGCTGCTGGTCGCGTTTGCTGGCGTTCGCGCGGGCAATAGCGGCTTCCACGGCCGCTTTGCGCGGATCTACCTGTTCTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGa       <  7:338359/150‑1 (MQ=11)
                                                                                                                                                  gaGCCGGTTGCTGTGCCCGTTTGCGCGCTTGGGCTCGGGCAATAGCGGCTGCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGa       <  5:1006437/149‑1 (MQ=255)
                                                                                                                                                  caGCCGGGGGCTGTTCCAGTTTGCGAGCTTTGGCGCGCGCAATAGCGGCTGCGACGGCCGCTTTGCGCGGAGCGCGCGGCTGCTCTGGCTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCg        <  5:203397/148‑1 (MQ=11)
                                                                                                                                                   aGCCGGTTGCTGTTCCCGCTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGAcg     <  7:33755/151‑1 (MQ=255)
                                                                                                                                                       |                                                                                                                                                     
GCGGCAACTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAAT‑AGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCG  >  DH1/2169398‑2169697

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑