Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | DH1 | 4,122,124 | 0 | C | A | 25.3% | 267.8 / 11.5 | 175 | intergenic (‑15/+22) | ECDH1_RS20430/ECDH1_RS20435 | tRNA‑Gly/tRNA‑Gly |
Reads supporting (aligned to +/- strand): ref base C (83/26); new base A (37/0); total (148/27) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 3.05e-04 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 176 total aligned reads displayed.
CTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGCATTTCTGCGTCGTTACGGG > DH1/4121977‑4122272 | acaaaaacccccatATTCGCGCGGGGGGGGTGTGTCCATTATATCACTTGCACATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCttt < 5:230376/138‑1 (MQ=14) ccAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCCTTACAGCACTTTGAAATTTTGGCGGGGGAAACGAGACTCGAACTCGCGCCCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGCGGGGTCTGTGTTTTgg > 7:454502/1‑149 (MQ=14) cctcggatATTCCCGGTGGGGTGGTGTGTGCCTTAAAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTgcagca < 7:928264/144‑1 (MQ=18) cggagaTATTCCCGCTTGGGGGGTGTGTCCCTTAAAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCAc < 5:644222/149‑1 (MQ=18) aGCTATTCGCGCTTGGGTGGTCTGTTCCTTACATTACTTTAAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACtt < 6:1020899/150‑1 (MQ=255) tATTCCCGCTTGGGTGGTCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTGGGTGGTCTGTGGTTTGGAGCACTTTTc > 1:1278645/1‑150 (MQ=255) atatcgctcTTGGGCGGTCTGTTCATTTCATCAATTGCATAATTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCa < 8:868222/143‑1 (MQ=14) aTTCCCGCTTGGGTGGTCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTGGGTGGTCTGTGGTTTGGCGGACTTTTCa > 5:1148390/1‑150 (MQ=255) ttCCCGCTTGGGTGGTCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTGGGTCGTCTGTTCTGTGCAGCAATTTTCaa > 3:265386/1‑150 (MQ=255) tCCCGCTTGGGTGGTCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTCGTATGTTTTTTGTAGGACTTTTCCAAt > 2:330820/1‑151 (MQ=17) tCCCGCTTGGGTGGTCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTGCGTGGTCAGTGCTTTGCAGCACGTATCatat > 1:379464/1‑151 (MQ=17) ccgcggggggggTCTGTACATTACAGCACTATCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCAAAttt < 5:35163/145‑1 (MQ=17) ccgggggTGCTCTGGGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCAAATTTTg < 3:1022460/147‑1 (MQ=255) tgctttgtcttttcattACATCTCTTTCAAATTTTGCAGCTGTAACCTAGTCTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCAAATTTTGGa < 2:897037/135‑1 (MQ=17) ggtgggtCTGTGCCTTTAAGGACTTTAATATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGc < 7:1161273/147‑1 (MQ=17) ggtgggtCTGTGCCTTACATCCCTATCAAAATTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGc < 7:553592/147‑1 (MQ=255) ggtggtCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGGTTTGGAGCACTTTTCTAATTTTGGAGCg > 1:1037388/1‑151 (MQ=255) gtggtCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGACTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCgg > 7:319537/1‑151 (MQ=255) tggtCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTGGGAGGTCTGTGCTGTGCAGGACTTTTCGCATTTAGGAGCggg > 4:976887/1‑151 (MQ=17) ggtCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGAGGTATGTTGGTTGCAGCACTTTTCAAATTTATGAGAggg > 3:947007/1‑150 (MQ=17) tCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTCGGACGTCTGTGCTGTGCAGGACTTTTCAAATTTAGGAGGCGGaa > 2:345607/1‑150 (MQ=17) cTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGTTCGTATGTTCTGTGAAGGACTTTTCAAATTTAGGAGCGGGaacc > 2:368909/1‑149 (MQ=17) cTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTAGGTGGTCTGTTATTTGCAGAAATTTTCAAATTTTTGAGGGGGaacc > 2:808046/1‑149 (MQ=17) gggcatttaagtaCTTTAAAATTTTGGATCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTAGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTTTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGaan < 1:993216/136‑2 (MQ=14) tgCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTCCTTGGTCTGTGGTTTTCAGCACTTTTCAAATTTAGGAGAGGGAAACg > 6:445522/1‑149 (MQ=17) gCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGCGTGGTCTGTGATTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACgagc > 3:1067691/1‑150 (MQ=255) ccTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGAAGCACTTTTCAAATTTTGGAGAGGGAAACGAGAc > 8:326483/1‑151 (MQ=255) cTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACGTCTTTGAGATTAAGCACTTTTCAAATTTAGGAGCGGGAAACgaaccc > 2:130309/1‑147 (MQ=14) cAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTGGGTGGTCTGTGCTTTGGCGCACTTTTCAAATTTTGGAGGGGGAACCGGGCCTCGa > 5:267245/1‑150 (MQ=17) cACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGGGTTGCAGCAATTTTCAAATTTTGGAGTGGGAAACGAGCCTCGAACTc > 1:353266/1‑151 (MQ=255) cAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGGTGTGGAGGACTTTTCAAATTTTGGAGCGGGTACCGAGCGTGGATGTCGCGAcc > 3:554068/1‑151 (MQ=14) cAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTGCGTGGTCTGTGGTATGAAGAAATTTTCAAATTTTGGAGTGGGTAACGGTTCTCGAAGTCGCGagc > 4:1181831/1‑149 (MQ=14) aaTTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTAAGTTATATGAAGAAATTTTCAAATTTATGAGACGGAACCGACCGTCGAACTAGCGAcaac > 6:1065532/1‑148 (MQ=11) ttttGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGGTTTGCAGCACTTTTCAAATTTTTGAGCGGGAAACGGGACGCGAACTAGCGACCCCg > 7:160/1‑150 (MQ=255) tGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTCCGTGGTCTGTGCTATGCAGCACTTTTCAAATTTTGGAGCGGAAAACGAGACTCGAACTACCGACCACGAACt > 6:796444/1‑151 (MQ=14) gAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTACGAGGTCTGTTATGTGGAGGAATTTTCAAATTTATGAGACGGAAACGCACCACGAACACGCGaacacgcacttg > 6:966831/1‑140 (MQ=2) aGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGAAGGACTTTTCAAATTTTTGAGCGGGAAACGAGCCTCGAACTCGCGACCCAGACCTTgg > 8:1014123/1‑151 (MQ=255) cGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTTATTTGAAGCAATTTTCAAATTTTGGAGCGGTAAACGAGCCTCGAAATCTCGACCCCGACCTTGGc > 8:723938/1‑150 (MQ=14) gggAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTATGTGATTTGCAGCACTTTTCTAATTTTTGAGCGGGAAACGACCCGCGAAGTCGCGACACAGACCTTGGCa > 5:1119038/1‑150 (MQ=14) ggAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTCGGTGTTCTGTGATTTGCAGCAATTTTCAAATTTTGGAGAGGGAAAGGAGCCGCGAAATCGCGACCCCGACCTTggga > 4:673050/1‑147 (MQ=14) aaCGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCCGGACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGCACTTGGCAAGGTc > 8:197746/1‑151 (MQ=255) aaCGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTGGGTGGTCTGTGGTTTGCCGGACTTTTCAAATTTTGGAGCGGGAACCGAGCCTCGATGTCGCGACCCCGCCCTTGCCAAggac > 1:569934/1‑149 (MQ=14) aaCGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTGGGTGGTCTGTGCGTTTCAGCACTTTTCAAATTTTTGAGAGGGAAACGAGACTCCAACTCGCGACCCCGACCTTCGCAAgcac > 2:617594/1‑148 (MQ=11) aCGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAACCGAGCCTCGAACTCGCGACCCCGCCCTTGGCAAGGTCg > 1:986032/1‑151 (MQ=255) gagaCTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGTTGGTATGTGGTTTGGAGGACTTTTCGAATTTTGGAGGGGGTAACGAGACTCGATCTCGCGACCCAGACCTGCGCATGCTCGTg > 3:839503/1‑151 (MQ=14) gagaCTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTGGGTGGTCTGTGCTTTGCAGGACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTg > 1:457207/1‑151 (MQ=255) gagaCTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCACGCTTGGGTGGTCTGTTATTTGGAGAACTTTTCAAATTTATGAGAGGGAACCGAAAGTCGAAGTAGCGACAACGACCTTGGGAAGGACGtc > 6:883373/1‑150 (MQ=14) gaCTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGGTTTGGAGCACTTTTCAAATTTTGGAGCGGGAAACGCGACTCGAACTCGCGACCCCGACCTTGGGAAGGTCGTGct > 7:546026/1‑151 (MQ=255) aCTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTCGTCTGTGATTTGAAGAACTTTTCAAATTTTGGAGAGGGAAACGAGACTCGAAATCGCGACCCCTACCTTGGAAAgcaagacct > 6:422188/1‑142 (MQ=14) aaCTCGCGACCCCGACCTTGGCAACGTAGTGCTCTACCAACTCAGCTATTCACTAATTCGAGGTCTGTGATTAGCAGCACTTTTCAAAATTTGTAGATGTAAACGAGCCTCGAAATAGCGACCACTACATTGGAAAgcaagacctctaac > 8:547749/1‑137 (MQ=9) aCTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGGTTTGGAGCACTTTTCAAATTTTGGAGCGGGTAACGAGCCTCGAACTCGCGACCCCGACCTTGGCATGGTCGTGCTCTACCa > 3:715185/1‑150 (MQ=255) aCTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGCCCTTGGCAAGGTCGTGCTCTACCa > 4:532577/1‑150 (MQ=38) aCTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTCGTATGTTGTTTTGAGCACTTTTCTAATTTTTGAGGGGGAAACGAGACTCGATCTAGCGACCCCTACGTTGGCAAGGTCGTCCTCTACCa > 8:1113198/1‑150 (MQ=11) tCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGCTTGGTCTGTGATATTAAGCAATTTTCAAATTTTGGAGACGGAAACGAAACTCCAACTCACGACCAAGCACTAGGCAAGCTCCTGCTCAACAAACt > 2:308803/1‑151 (MQ=2) gcgACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGATTTTCAGAAATTTTCAAATTTTTGAGAGGGAAACGAGACTCGAAATCGCGACCCCGACATTGGAAAGGTCGTGCACAAACAACTg > 4:610350/1‑150 (MQ=11) cgACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAACCGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTg > 5:384383/1‑149 (MQ=38) cgACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTCGGTGGTCTGTGCTTTGCAGGACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTAGCCAAGCTCGAGCTCTACCAACTGac > 2:10377/1‑150 (MQ=14) aCCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGATTTGCAGCACTTTTCAAATTTTGGAGAGGGAAACGAGACTCGAACTCGCGACCCCGCCCTTGGGAAGCTCGTGCTCTACCAACTGAGCt > 8:259814/1‑151 (MQ=255) ccccGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGAAGCACTTTTCAAATTTTGGAGGGGGAAACGCGGCGCGAACTCGCGACCCCGACGTTGGCAAGCTCGTGCTCTACAAACTGAGCt > 5:5671/1‑150 (MQ=14) ccccGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGATTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCt > 2:1031573/1‑150 (MQ=38) cccGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGAAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTAt > 6:285097/1‑151 (MQ=38) cccGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTGGGTCGTCTGTGAGTTGAAGCACTTTTCAAATTTTGGAGCGGGAAACGAGCCTCGAACTCCCGACCACGACCTACGCAAGGTCGAGCTCTACCAACTGAGCTAt > 5:728031/1‑151 (MQ=11) ccGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTTTGGTTTGGAGCACTTTTCTAATTTTGGAGGGGGAAAGGGGCCTGGATCTCTCGACCCAGAGCTTCGGATGGTCGTGCTCTACAAACTGAGCTAtt > 5:1164929/1‑151 (MQ=14) gACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTTCTGTGGAGGACTTTTCAAATTTTGGAGCGGGAAACGCGAGTCGAACTCGCGACCCCGCGGTTGGGAAGGTCGTGCGCTACAAACTGAGCTATTcg > 1:1108001/1‑150 (MQ=14) gACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTCGTCTGTGATTTGAAGAAATTTTCAAATTTTTGAGAGGGAAACGAGCCTCGAACTCGCGACCCCGAACTTGGGAAGGTCGTGCTCTAACAACTGAGCTATTcc > 2:950075/1‑151 (MQ=14) gACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGCGTGTTCTGTGGTTTTGAGGACTTTTCAAATTTTGGAGCGGGAAACGAGCCTCGAACTCGCGACACCGAGCTTGGCAAGGTCGTGCGCTACAAACTGAGGTATTcc > 1:795542/1‑151 (MQ=11) tGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTATGTGATTTGGAGGACTTTTCACATTTGTGAGACGGAACCGCGCCACGATCTAGCGACCCAGCGGTAGGGAAGCTACTCCACTACAAACTGAGGTATTccctagt > 4:1157776/1‑147 (MQ=9) cAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTGGGTGGTCTGTGCTTTTCAGCAATTTTCAAATTTTGGAGAGGGAAACGAGACTCGAACTCGCGACCCCGACCTAGCCAAGGTCGTGCTCAACCAACTTAGCTATTccctctt > 5:886956/1‑144 (MQ=11) tCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTATGTTATTTGAAGAACTTTTCAAATTTTGGAGACGGAAACGCGAGTCGAACTCGCGACACCGAGCTTCGCAAGGTCGTGCTCTAAAAACTGAGATATTCCCGAGTACTACtt > 4:382838/1‑150 (MQ=14) cGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTa > 5:147359/1‑150 (MQ=255) gTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGGACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACAAACTGAGCTATTCCCGCGTACTACTTAAt > 3:69221/1‑151 (MQ=255) tctACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTg > 8:151213/1‑151 (MQ=255) aCCAACTGAGCTATTCCCGCTTGGGAGGTCAGTGGTATGAAGCAATTTTCAAATTTTGGAGCGGGAAACGAGACTCAAACTATCGACCAAGAACTTGGAAAGGTCGAGCTCTAAAAACTGAGCTATTCAAGAGTACAACTTAATTTTGCt > 6:354846/1‑150 (MQ=9) ccAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCttt > 1:257726/1‑151 (MQ=255) cTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGt > 8:808206/1‑150 (MQ=255) cTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGt > 8:626808/1‑150 (MQ=255) aGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAAtt > 3:907978/1‑151 (MQ=255) gCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTTCTTAATTTTGCTTTCGTAAttt > 1:90151/1‑151 (MQ=255) gCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAAttt > 3:1192586/1‑151 (MQ=255) cTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCAAATTTTGGATCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAAtttt > 5:214692/1‑151 (MQ=255) cTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAAtttt > 3:44902/1‑151 (MQ=255) tATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTc > 3:333661/1‑151 (MQ=255) aTTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCg > 4:266349/1‑151 (MQ=255) ttCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGc > 6:558695/1‑151 (MQ=255) tCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGc > 3:34652/1‑150 (MQ=255) gCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGCATTTc > 4:754525/1‑151 (MQ=255) gCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCGAGTCCCGCGTCCTTCTTAATTTTGCTTTCGTAATTTTCGGATTTc > 8:663237/1‑151 (MQ=255) gCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCGACCAACTGAGCTATTCCCTCGTACTACTTAATTTTTCTTTCGTAATTTTCGCAttt > 2:488990/1‑150 (MQ=255) ttGGGTGGTCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGCATTTCTg > 4:1033023/1‑151 (MQ=255) tgtgtggtCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGCATTTCTg < 4:422294/147‑1 (MQ=255) tggtCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGCATTTCTGcgtcg > 5:847220/1‑151 (MQ=255) ggtGTGTGCTTTCGAGAATTTTTAAAATTTTGGAGCGGTAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGCATTTCTGcgtcg < 7:851697/150‑1 (MQ=21) ggtCTGTGGTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGGAATTTTCGCATTTCTGcgtcgt > 4:1098543/1‑151 (MQ=255) ggtCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGCATTTCTGcgtcgt > 7:1223747/1‑151 (MQ=255) gtCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGCATTTCTGCGTCGtt > 4:810553/1‑151 (MQ=255) tCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGCATTTCTGCGTCGtt > 3:413734/1‑150 (MQ=255) cTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGCATTTCTGCGTCGTTAc > 1:725031/1‑151 (MQ=255) gtgCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGCATTTCTGCGTCGTTACgg > 8:1267594/1‑151 (MQ=255) tgCCTTACAGCAC‑TTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGAAATTTTCGAATTTATGCGACGTTACggg > 4:727231/1‑150 (MQ=17) cTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGCATTTCTGCGTCGTTACggg > 5:518171/1‑149 (MQ=255) | CTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGCATTTCTGCGTCGTTACGGG > DH1/4121977‑4122272 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |