BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	DH1	= 3575873	248 (0.510)	252 (0.530)	162/292	3.3	49.1%	noncoding (3/1201 nt)	repeat_region	repeat region
*	?	DH1	3577073 =	281 (0.590)	252 (0.530)	162/292	3.3	49.1%	intergenic (+151/‑282)	insH1/yagM	transposase/hypothetical protein
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 277 total aligned reads displayed.

AACGTTTCCTTCTGCCTTCATTACTACCCCTACTAATTCAATAATGCTTAAAGCTTTCTTTGCCAATATCTCAATCACTGAGGTGGCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGC  >  DH1/3575723‑3576022

  cGTTTCCTTCTGCCTTCATTACTACCCCTACTAATTCAATAATGCTTAAAGCTTTCTTTGCCAATATCTCAATCACTGAGGTGGCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAggg                                                                                                                                                     >  2:1087635/1‑151 (MQ=255)

  cGTTTCCTTCTGCCTTCATTACTACCCCTACTAATTCAATAATGCTTAAAGCTTTCTTTGCCAATATCTCAATCACTGAGGTGGCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAgct                                                                                                                                                     >  4:947322/1‑149 (MQ=255)

  cGTTTCCTTCTGCCTTCATTACTACCCCTACTAATTCAATAATGCTTAAAGCTTTCTTTGCCAATATCTCAATCACTGAGGTGGCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAgct                                                                                                                                                     >  3:1407999/1‑149 (MQ=255)

   gTTTCCTTCTGCCTTCATTAATACCACTACTAATTCAATAATGCTTAAAGCTTTCTTAGCCAATATCTCAATCACTGAGGTGTCAATATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAgcta                                                                                                                                                    <  4:1403658/151‑4 (MQ=255)

   gTTTCCTTATGCCTTCATTACTAACCCTACTAATTCAATAATGCTTAAAGATTTCTTTGCAAATATCTCAATCACTGAGGTGGCAAAATGAGCGCATTCAAACTCCAGGATACATATCAATCACAGCACATTTCAACAGATGAGTTAggt                                                                                                                                                     >  2:204147/1‑149 (MQ=255)

   gTTGCCTTCTGCCTGCCTTCCTACCCCTACTAATTCAATACTGCTTAAAGCTTTCTTTGCCAATATCTCAATCACTGAGGTGGCAAAATGCGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGa                                                                                                                                                    <  3:1627510/151‑1 (MQ=255)

    tttCCTTCTGCCTTCATTACTACCCCTACTAATTCAATAATGCTTAAAGCTTTCTTTGCCAATATCTCAATCACTGAGGTGGCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGa                                                                                                                                                    >  3:41057/1‑150 (MQ=255)

     ttCCTTCTGCCTTCATTACTACCCCTACTAATTCAATAATGCTTAAAGCTTTCTTTGCCAATATCTCAATCACTGAGGTGGCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGaa                                                                                                                                                   <  1:87819/150‑1 (MQ=255)

     ttCCTTCTGCCTTCATTACTACCCCTACTAATTCAATAATGCTTAAAGCTTTCTTTGCCAATATCTCAATCACTGAGGTGGCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGa                                                                                                                                                    >  3:1570283/1‑149 (MQ=255)

     ttCCTTCTGCCTTCATTACTACCCCTACTAATTCAATAATGCTTAAAGCTTTCTTTGCCAATATCTCAATCACTGAGGTGGCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGa                                                                                                                                                    >  5:1436650/1‑149 (MQ=255)

     ttCCTTCTGCCTTCATTACTACCCCTACTAATTCAATAATGCTTAAAGCTTTCTTTGCCAATATCTCAATCACTGAGGTGGCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGa                                                                                                                                                    >  6:1104386/1‑149 (MQ=255)

      tCCTTCTGCCTTCATTACTACCCCTACTAATTCAATAATGCTTAAAGCTTTCTTTGCCAATATCTCAATCACTGAGGTGGCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAgctaaa                                                                                                                                                  >  8:1060325/1‑145 (MQ=255)

       ccctcagccttgcatactacCCCTACTAATTCAATAATGCTTAAAGCTTTCTTTGCCAATATCTCAATCACTGAGGTGGCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAgg                                                                                                                                                 <  8:1686183/136‑1 (MQ=255)

       ccTTCTGCCTTCATTACTACCCCTACTAATTCAATAATGCTTAAAGCTTTCTTTGCCAATATCTCAATCACTGAGGTGGCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAgg                                                                                                                                                 <  4:420369/150‑1 (MQ=255)

        cTTCTGCCTTCATTACTACCCCTACTAATTCAATAATGCTTAAAGCTTTCTTTGCCAATATCTCAATCACTGAGGTGGCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAgctaaaatc                                                                                                                                               >  6:1800267/1‑143 (MQ=255)

        cTTCTGCCTTCATTACTACCCCTACTAATTCAATAATGCTTAAAGCTTTCTTTGCCAATATCTCAATCACTGAGGTGGCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAgctaaaatc                                                                                                                                               >  2:336484/1‑143 (MQ=255)

         ttCTGCCTTCATTACTACCCCTACTAATTCAATAATGCTTAAAGCTTTCTTTGCCAATATCTCAATCACTGAGGTGGCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGc                                                                                                                                              >  7:785630/1‑151 (MQ=255)

         ttCTGCCTTCATTACTACCCCTACTAATTCAATAATGCTTAAAGCTTTATTTGCTAATATCTCAATCACTGAGGTGGCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGc                                                                                                                                              >  2:1260775/1‑151 (MQ=255)

          tCTGCCTTCATTACTACCCCTACTAATTCAATAATGCTTAAAGCTTTCTTTGCCAATATCTCAATCACTGAGGTGGCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAgctaaaatc                                                                                                                                               <  6:777950/149‑9 (MQ=255)

          tCTGCCTTCATTACTACCCCTACTAATTCAATAATGCTTAAAGCTTTCTTTGCCAATATCTCAATCACTGAGGTGGCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAgctaaaatc                                                                                                                                               <  3:229307/149‑9 (MQ=255)

          tCTGCCTTCATTACTACCCCTACTAATTCAATAATGCTTAAAGCTTTCTTTGCCAATATCTCAATCACTGAGGTGGCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCg                                                                                                                                             >  7:1245652/1‑151 (MQ=255)

             gCCTTCATTACTACCCCTACTAATTCAATAATGCTTAAAGCTTTCTTTGCCAATATCTCAATCACTGAGGTGGCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAgctaaaatcatta                                                                                                                                           <  7:402126/150‑13 (MQ=255)

             gCCTTCATTACTACCCCTACTAATTCAATAATGCTTAAAGCTTTCTTTGCCAATATCTCAATCACTGAGGTGGCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGaa                                                                                                                                           <  4:1006796/150‑1 (MQ=255)

              ccTTCATTACTACCCCTACTAATTCAATAATGCTTAAAGCTTTCTTTGCCAATATCTCAATCACTGAGGTGGCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAgctaaaatcattagc                                                                                                                                         >  7:1701997/1‑137 (MQ=255)

               cTTCATTACTACCCCTACTAATTCAATAATGCTTAAAGCTTTCTTTGCCAATATCTCAATCACTGAGGTGGCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACa                                                                                                                                         >  3:1272203/1‑150 (MQ=255)

               cTTCATTACTACCCCTACTAATTCAATAATGCTTAAAGCTTTCTTTGCCAATATCTCAATCACTGAGGTGGCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACa                                                                                                                                         >  7:484583/1‑150 (MQ=255)

                ttCATTACTACCCCTACTAATTCAATAATGCTTAAAGCTTTCTTTGCCAATATCTCAATCACTGAGGTGGCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACa                                                                                                                                         >  2:1519438/1‑149 (MQ=255)

                 tCATTACTACCCCTACTAATTCAATAATGCTTAAAGCTTTCTTTGCCAATATCTCAATCACTGAGGTGGCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACaa                                                                                                                                        <  2:1724217/149‑1 (MQ=255)

                   aTTACTACCCCTACTAATTCAATAATGCTTAAAGCTTTCTTTGCCAATATCTCAATCACTGAGGTGGCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTcc                                                                                                                                    >  7:312126/1‑151 (MQ=255)

                      actacCCCTACTAATTCAATAATGCTTAAATCTTTCTTTGCCAATATCTCAATCACTGAGGTGGCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTg                                                                                                                                 <  3:645761/151‑1 (MQ=255)

                        tacCCCTACTAATTCAATAATGCTTAAAGCTTTCTTTGCCAATATCTCAATCACTGAGGTGGCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGat                                                                                                                               >  6:370393/1‑151 (MQ=255)

                          ccccTACTAATTCAATAATGCTTAAATCTTTCTTTGCCAATATCTCAATCACTGAGGTGGCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGatat                                                                                                                             <  5:1175184/151‑1 (MQ=255)

                          ccccTACTAATTCAATAATGCTTAAAGCTTTCTTTGCCTATATCTCAATCACTGAGGTGGCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGatat                                                                                                                             <  1:1848230/151‑1 (MQ=255)

                            ccTACTAATTCAATAATGCTTAAAGCTTTCTTTGCCAATATCTCAATCACTGAGGTGGCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATg                                                                                                                            >  7:527112/1‑150 (MQ=255)

                               actaATTCAATAATGCTTAAAGCTTTCTTTGCCAATATCTCAATCACTGAGGGGGCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATgag                                                                                                                          <  4:975609/149‑1 (MQ=255)

                                  aaTTCAATAATGCTTAAAGCTTTCTTTGCCAATATCTCAATCACTGAGGTGGCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCa                                                                                                                      <  1:150020/150‑1 (MQ=255)

                                  aaTTCAATAATGCTTAAAGCTTTCTTTGCCAATATCTCAATCACTGAGGTGGCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCAt                                                                                                                     >  4:1520/1‑151 (MQ=255)

                                    ttCAATAATGCTTAAAGCTTTCTTTGCCAATATCTCAATCACTGAGGTGGCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGt                                                                                                                   >  4:1209363/1‑151 (MQ=255)

                                       aataatGCTTAAAGCTTTCTTTGCCAATATCTCAATCACTGAGGTGGCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTg                                                                                                                >  1:463681/1‑151 (MQ=255)

                                       aataatGCTTAAAGCTTTCTTTGCCAATATCTCAATCACTGAGGTGGCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTg                                                                                                                <  7:261234/151‑1 (MQ=255)

                                        ataatGCTTAAAGCTTTCTTTGCCAATATCTCAATCACTGAGGTGGCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGt                                                                                                               >  7:912068/1‑151 (MQ=255)

                                          aatGCTTAAAGCTTTCTTTGCCAATATCTCAATCACTGAGGTGGCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCa                                                                                                             <  7:1426296/151‑1 (MQ=255)

                                           atGCTTAAAGCTTTCTTTGCCAATATCTCAATCACTGAGGTGGCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCAt                                                                                                            <  3:476409/151‑1 (MQ=255)

                                            tGCTTAAAGCTTTCTTTGCCAATATCTCAATCACTGAGGTGGCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATc                                                                                                           >  5:286596/1‑151 (MQ=255)

                                             gCTTAAAGCTTTCTTTGCCAATATCTCAATCACTGAGGTGGCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCt                                                                                                          >  3:1048092/1‑151 (MQ=255)

                                              cTTAAAGCTTTCTTTGCCAATATCTCAATCACTGAGGTGGCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTg                                                                                                         >  8:1834193/1‑151 (MQ=255)

                                                    gCTTTCTTTGCCAATATCTCAATCACTGAGGTGGCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGCGcc                                                                                                    >  8:216507/1‑150 (MQ=255)

                                                      tttctttGCCAATATCTCAATCACTGAGGTGGCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCGGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCAt                                                                                                  >  2:753432/1‑150 (MQ=255)

                                                         ctttGCCAATATCTCAATCACTGAGGTGGCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGa                                                                                               >  5:623144/1‑150 (MQ=255)

                                                            tGCCAATATCTCAATCACTGAGGTGGCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAAc                                                                                             >  8:68133/1‑149 (MQ=255)

                                                                aaTATCTCAATCACTGAGGTGGCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGtt                                                                                       >  5:1464463/1‑151 (MQ=255)

                                                                aaTATCTCAATCACTGAGGTGGCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGtt                                                                                       >  6:1747267/1‑151 (MQ=255)

                                                                   atCTCAATCACTGAGGTGGCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTtcat                                                                                    >  4:70166/1‑151 (MQ=255)

                                                                       cAATCACTGAGGTGGCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATg                                                                                >  3:893710/1‑151 (MQ=255)

                                                                            aCTGAGGTGGCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGtc                                                                            >  1:821422/1‑150 (MQ=255)

                                                                                aGGTGTCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCaa                                                                       <  6:421467/151‑1 (MQ=255)

                                                                                aGGTGGCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGtcatca                                                                        <  8:145956/150‑1 (MQ=255)

                                                                                    ggCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACtt                                                                    >  5:266829/1‑150 (MQ=255)

                                                                                    ggCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTa                                                                   <  5:1284418/151‑1 (MQ=255)

                                                                                      cAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAGCAGGGTTCATCATGAGTCATCAACTTAcc                                                                 >  3:945079/1‑151 (MQ=255)

                                                                                        aaaTGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCtt                                                               <  7:1129534/151‑1 (MQ=255)

                                                                                        aaaTGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCtt                                                               >  5:1878004/1‑151 (MQ=255)

                                                                                         aaTGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTc                                                              >  7:1586878/1‑151 (MQ=255)

                                                                                          aTGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCg                                                             >  6:1380604/1‑151 (MQ=255)

                                                                                            gAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGc                                                            <  8:910894/150‑1 (MQ=255)

                                                                                            gAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCAATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGcc                                                           >  6:1682459/1‑151 (MQ=255)

                                                                                             aGCGCATTCAAACTCCCGGATACATCTCAATCACATCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGcc                                                           <  1:1088892/150‑1 (MQ=255)

                                                                                                gcATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTTTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGAc                                                        >  4:1588754/1‑150 (MQ=255)

                                                                                                gcATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGAc                                                        >  6:703185/1‑150 (MQ=255)

                                                                                                  aTTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGt                                                     >  3:319287/1‑151 (MQ=255)

                                                                                                     cAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGGGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGa                                                   <  2:515875/150‑1 (MQ=255)

                                                                                                      aaaCTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAAt                                                 >  6:924601/1‑151 (MQ=255)

                                                                                                       aaCTCCGGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAAtt                                                <  2:247967/151‑1 (MQ=255)

                                                                                                       aaCTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAAtt                                                >  6:860903/1‑151 (MQ=255)

                                                                                                        aCTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTc                                               <  1:1261670/151‑1 (MQ=255)

                                                                                                           cccGGATACATCTCAATCAGAGCTCATTTCAACAGGTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTca                                              <  2:873886/149‑1 (MQ=255)

                                                                                                               gATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTa                                        <  5:840894/151‑1 (MQ=255)

                                                                                                               gATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTa                                        <  5:726423/151‑1 (MQ=255)

                                                                                                                aTACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTaa                                       <  5:132563/151‑1 (MQ=255)

                                                                                                                  aCATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGTGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAgc                                     >  5:428701/1‑151 (MQ=255)

                                                                                                                  aCATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAg                                      <  2:1438439/150‑1 (MQ=255)

                                                                                                                       tcAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGt                                >  7:248489/1‑151 (MQ=255)

                                                                                                                        cAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGt                                <  3:1574593/150‑1 (MQ=255)

                                                                                                                        cAATCACACCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGATATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGt                                <  2:1146766/150‑1 (MQ=255)

                                                                                                                         aaTCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCa                              <  4:1046781/151‑1 (MQ=255)

                                                                                                                         aaTCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATAAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCa                              <  8:256731/151‑1 (MQ=255)

                                                                                                                          aTCACAGCTAATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTTATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAg                             <  6:1462856/151‑1 (MQ=255)

                                                                                                                             acaGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGAcc                          >  1:243468/1‑151 (MQ=255)

                                                                                                                               atcccagccaaaCAGCTTACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCa                         <  5:1112119/140‑1 (MQ=11)

                                                                                                                               atcccagccaaaCAGCTTACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGAGCCGTCAGAcc                          >  5:1782324/11‑149 (MQ=11)

                                                                                                                               aGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGAcc                          >  1:1009440/1‑149 (MQ=255)

                                                                                                                                   cATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGaaa                     <  8:1424361/150‑1 (MQ=255)

                                                                                                                                    aTTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAag                   <  5:173333/151‑1 (MQ=255)

                                                                                                                                      ttCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAaga                  <  8:574296/150‑1 (MQ=40)

                                                                                                                                        cAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAgaga                <  7:1886362/150‑1 (MQ=39)

                                                                                                                                             gCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCt          <  7:1501641/151‑1 (MQ=35)

                                                                                                                                                     aGGGAAGGTGCGAACAAGTCCCTGATATGTGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCg   <  1:626491/150‑1 (MQ=14)

                                                                                                                                                     aGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCgcgc  >  6:1859301/1‑151 (MQ=14)

                                                                                                                                                     aGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGc  >  2:566605/1‑151 (MQ=31)

                                                                                                                                                     aGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGc  <  4:1809745/151‑1 (MQ=31)

AACGTTTCCTTCTGCCTTCATTACTACCCCTACTAATTCAATAATGCTTAAAGCTTTCTTTGCCAATATCTCAATCACTGAGGTGGCAAAATGAGCGCATTCAAACTCCCGGATACATCTCAATCACAGCTCATTTCAACAGCTGAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGC  >  DH1/3575723‑3576022

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.