Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | DH1 | 2,999,588 | 0 | A | T | 52.3% | 66.5 / inf | 390 | F269I (TTC→ATC) | dacC | D‑alanyl‑D‑alanine carboxypeptidase |
Reads supporting (aligned to +/- strand): ref base A (93/93); new base T (113/91); total (206/184) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 3.11e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 |
Only 100 of 425 total aligned reads displayed.
GCCCGCTTCACCTGCCCCGAGATTCACTTCGCTCTTATCACCAAACCAGACGCGCTGAGTCACAAAGGTGGCATCAGGTTTAATTGGCGTCACGGTTTCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGAAACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCAACCAGATTATATCCCGCGCCTGCCGTGGTTCCTGTCTTCATGCCATCAACATTCAGATTGCTGCTCCACAGCAGACGGTTACGGT > DH1/2999439‑2999737 | gCCCGCTTCACCTGCCCCGAGATTCACTTCGCTCTTATCACCAAACCAGACGCGCTGAGTCACAAAGGTGGCATCAGGTTTAATTGGCGTCACGGTTTCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAaaacggaaa < 7:728573/151‑1 (MQ=255) cccGCTTCACCTGCCCCGAGATTCACTTCGCTCTTATCACCAAACCAGACGCGCTGAGTCACAAAGGTGGCATCAGGTTTAATTGGCGTCACGGTTTCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAaaacggaaac < 3:16758/151‑1 (MQ=255) ccGCTTCACCTGCCCCGAGATTCACTTCGCTCTTATCACCAAACCAGACGCGCTGAGTCACAAAGGTGGCATCAGGTTTAATTGGCGTCACGGTTTCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAaaacggaaacg > 6:1771613/1‑151 (MQ=255) cGCTTCACCTGCCCCGAGATTCACTTCGCTCTTATCACCAAACCAGACGCGCTGAGTCACAAAGGTGGCATCAGGTTTAATTGGCGTCACGGTTTCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAaaacggaaacgg > 6:1858865/1‑151 (MQ=255) gCTTCACCTGCCCCGAGATTCACTTCGCTCTTATCACCAAACCAGACGCGCTGAGTCACAAAGGTGGCATCAGGTTTAATTGGCGTCACGGTTTCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGAAAcggt > 2:599995/1‑151 (MQ=255) ccTGCCCCGAGATTCACTTCGCTCTTATCACCAAACCAGACGCGCTGAGTCACAAAGGTGGCATCAGGTTTAATTGGCGTCACGGTTTCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGATACGGTCGGttt < 1:1536669/151‑1 (MQ=255) gCCCCGAGATTCACTTCGCTCTTATCACCAAACCAGACGCGCTGAGTCACAAAGGTGGCATCAGGTTTAATTGGCGTCACGGTTTCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGATACGGTCGGTTTTCg > 4:1171241/1‑151 (MQ=255) gCCCCGAGATTCACTTCGCTCTTATCACCAAACCAGACGCGCTGAGTCACAAAGGTGGCATCAGGTTTAATTGGCGTCACGGTTTCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGAAACGGTCGGtttt < 8:801862/149‑1 (MQ=255) ccGAGATTCAATTCGATCTTATCACCAAACCAGACGCGCTGAGTCACAAAGGTGGCATCAGGTTTAATTGGCGTCACGGTTTCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGATAAGGTACGTTTACGcc > 2:97058/1‑150 (MQ=255) gagaTTCACTTCGCTCTTATCACCAAACCAGACGCGCTGAGTCACAAACGTGGCATCAGGTTTAATTGGCGTCACGGTTTCAAAGAAGCGCAAACCCCACGTCAATAATTTCTCAGACTCATTAAAACGGATACGGTCGGttttacccacc > 1:975531/1‑144 (MQ=255) tCGCTCTTATCACCAAACCAGACGCGCTGAGTCACAAAGGTGGCATCAGGTTTAATTGGCGTCACGGTTTCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGATACGGTCGGTTTTCGCCCCCAACACTACg < 5:328204/150‑1 (MQ=255) tCGCTCTTATCACCAAACCAGACGCGCTGAGTCACAAAGGTGGCATCAGGTTTAATTGGCGTCACGGTTTCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGATACGGTCGGTTTTCGCCCCCAACACTACg < 8:1614788/150‑1 (MQ=255) tCGCTCTTATCACCAAACCAGACGCGCTGAGTCACAAAGGTGGCATCAGGTTTAATTGGCGTCACGGTTTCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGAAACGGTCGGTTTTCGGCCCCAACACTACg < 1:1975763/150‑1 (MQ=255) tCGCTCTTATCACCAAACCAGACGCGCTGAGGCGCAAAGGTGGCATCAGGTTTAATTGGCGTCACGGTTTCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGATACGGTCGGTTTTCGCCCCCAACACTAc < 8:371701/149‑1 (MQ=255) ctTATCACCAAACCAGACGCGCTGAGTCACAAAGGTGGCATCAGGTTTAATTGGCGTCACGGTTTCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGAAACGGTCGGTTTTCGCCCCCAACACTACGgaga < 5:1773924/149‑1 (MQ=255) tATCACCAAACCAGACGCGCTGAGTCACAAAGGTGGCATCAGGTTTAATTGGCGTCACGGTTTCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGATACGGTCGGTTTTCGCCCCCAACACTACGGAGATTa > 1:1280599/1‑150 (MQ=255) aaCCAGACGCGCTGAGTCACAAAGGTGGCATCAGGTTTAATTGGCGTCACGGTTTCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGAAACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCatat < 4:1388816/151‑1 (MQ=255) aCCAGACGCGCTGAGTCACAAAGGTGGCATCAGGTTTAATTGGCGTCACGGTTTCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGAAACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATc > 1:335127/1‑151 (MQ=255) ccAGACGCGCTGAGTCACAAAGGTGGCATCAGGTTTAATTGGCGTCACGGTTTCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGATACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCg < 2:1550331/151‑1 (MQ=255) ccAGACGCGCTGAGTCACAAAGGTGGCATCAGGTTTAATTGGCGTCACGGTTTCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGATACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCg < 4:1548682/151‑1 (MQ=255) aGACGCGCTGAGTCACAAAGGTGGCATCAGGTTTAATTGGCGTCACGGTTTCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGATACGGTCGGTTTTCACCCCCAACACTACGGAGATTAAACGCATATCGcc < 7:1352889/151‑1 (MQ=255) aCGCGCTGAGTCACAAAGGTGGCATCAGGTTTAATTGGCGTCACGGTTTCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGATACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCt > 5:1625516/1‑151 (MQ=255) cgcgCTGAGTCACAAAGGTGGCATCAGGTTTAATTGGCGTCACGGTTTCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGATACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTg > 6:848680/1‑151 (MQ=255) gcgcTGAGTCACAAAGGTGGCATCAGGTTTAATTGGCGTCACGGTTTCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGAAACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTgg > 5:129033/1‑151 (MQ=255) gcgcTGAGTCACAAAGGTGGCATCAGGTTTAATTGGCGTCACGGTTTCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGAAACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTgg < 5:2035841/151‑1 (MQ=255) gcgcTGAGTCACAAAGGTGGCATCAGGTTTAATTGGCGTCACGGTTTCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGAAACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTgg < 3:1521253/151‑1 (MQ=255) cTGAGTCACAAAGGTGGCATCAGGTTTAATTGGCGTCACGGTTTCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGCCTCATTAAAACGGATACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGt > 6:907532/1‑150 (MQ=255) cTGAGTCACAAAGGTGGCATCAGGTTTAATTGGCGTCACGGTTTCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGATACGGTCGGTTTTCGCCCCCAACACTACGGAGATTTAACGCATATCGCCATGGGt > 5:1472632/1‑150 (MQ=255) cTGAGTCACAAAGGTGGCATCAGGTTTAATTGGCGTCACGGTTTCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGATACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGt > 5:754881/1‑150 (MQ=255) tGAGTCACAAAGGTGGCATCAGGTTTAATTGGCGTCACGGTTTCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGAAACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGt > 5:1194631/1‑149 (MQ=255) gAGTCACAAAGGTGGCATCAGGTTTAATTGGCGTCACGGTTTCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGATACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTa < 1:511162/149‑1 (MQ=255) aGTCACAAAGGTGGCATCAGGTTTAATTGGCGTCACGGTTTCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGAAACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGcc < 6:1055611/151‑1 (MQ=255) aGTCACAAAGGTGGCATCAGGTTTAATTGGCGTCACGGTTTCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGAAACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGcc < 5:961132/151‑1 (MQ=255) cacaAAGGTGGCATCAGGTTTAATTGGCGTCACGGTTTCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGAAACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGaa < 2:1324459/151‑1 (MQ=255) acaAAGGTGGCATCAGGTTTAATTGGCGTCACGGTTTCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCTGACTCATTAAAACGGATACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAg < 7:1902437/151‑1 (MQ=255) caAAGGTGGCATCAGGTTTAATTGGCGTCACGGTTTCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGAAACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGc > 5:1336495/1‑151 (MQ=255) aaaGGTGGCATCAGGTTTAATTGGCGTCACGGTTTCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGATACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATAGCCCTGGGTAGCCGAAGc > 6:450445/1‑150 (MQ=255) aaaGGTGGCATCAGGTTTAATTGGCGTCACGGTTTCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGAAACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGc > 3:1432006/1‑150 (MQ=255) aaGGTGGCATCAGGTTTAATTGGCGTCACGGTTTCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGAAACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCa > 6:965082/1‑150 (MQ=255) aGGTGGCATCAGGTTTAATTGGCGTCACGGTTTCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGCCTCATTAAAACGGATACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCacc > 4:740573/1‑149 (MQ=255) cATCAGGTTTAATTGGCGTCACGGTTTCAAAGAAGCGGAAACCCCAAGTCAATAATTTCTCAGACTCATTAAAACGGATACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCAACCAGAtt > 3:1223698/1‑151 (MQ=255) aTCAGGTTTAATTGGCGTCACGGTTTCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGAAACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCTACCAGAtt > 6:1331955/1‑150 (MQ=255) cAGGTTTAATTGGCGTCACGGTTTCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGAAACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCAACCAGATtat < 1:100024/150‑1 (MQ=255) aGGTTTAATTGGCGTCACGGTTTCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGATACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCAACCAGATTatat > 7:553453/1‑151 (MQ=255) ggTTTAATTGGCGTCACGGTTTCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGAAACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCAACCAGATta < 2:1690353/147‑1 (MQ=255) gTTTAATTGGCGTCACGGTTTCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGAAACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCAACCAGATTATATcc < 8:55799/151‑1 (MQ=255) tttAATTGGCGTCACGGTTTCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCGGACTCATTAAAACGGAAACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCAACCAGATTATATccc > 7:1541296/1‑151 (MQ=255) ttAATTGGCGTCACGGTTTCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGATACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCAACCAGATTATATccc < 2:754038/150‑1 (MQ=255) tAATTGGCGTCACGGTTTCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGAAACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCAACCAGATTATATCCcgc > 7:504181/1‑151 (MQ=255) aaTTGGCGTCACGGTTTCAAAGAAGTGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGAAACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCAACCAGATTATATCCcgcg > 4:1037110/1‑151 (MQ=255) aaTTGGCGTCACGGTTTCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGATACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCAACCAGATTATATCCcgcg < 3:610608/151‑1 (MQ=255) aaTTGGCGTCACGGTTTCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGATACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCAACCAGATTATATCCcgc < 6:1501843/150‑1 (MQ=255) aaTTGGCGTCACGGTTTCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGAAACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCAACCAGATTATATCCcgcg < 7:2027477/151‑1 (MQ=255) aaTTGGCGTCACGGTTTCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGAAACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCAACCAGATTATATCCcgc < 4:617533/150‑1 (MQ=255) tGGCGTCACGGTTTCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGATACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCAACCAGATTATATCCCGCGcc < 2:480073/150‑1 (MQ=255) ggCGTCACGGTTTCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGATACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCAACCAGATTATATCCCGCGCCtc > 3:894685/1‑150 (MQ=255) cGTCACGGTTTCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGATACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCAACCAGATTATATCCCGCGCCTGcc > 2:1181563/1‑151 (MQ=255) tttCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGAAACGGTCGGTTTTCGCCCCCACCACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCAACCAGATTATATCCCGCGCCTGCCGTGGTTcc > 8:881465/1‑151 (MQ=255) ttCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGATACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCAACCAGATTATATCCCGCGCCTGCCGTGGTTCCt > 7:1388996/1‑151 (MQ=255) tCATAGATGCGGAAACCCCATGTCAATTATTTCTCATACTCATTAAAACGGTTACGGTCGTTTTTCTCCCCCAAGACTACTGAGATTAAACGCATATCGCCCTGTGTAGCCGAAGCAACCAGATTATATCCCGCGCCTGCCGTGGTTCCt < 6:1660005/150‑1 (MQ=255) tCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGATACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCAACCAGATTATATCCCGCGCCTGCCGTGGTTCCt < 3:1108586/150‑1 (MQ=255) cAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGATACGGGCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCAACCAGATTATATCCCGCGCCTGCCGTGGTTCCTg < 8:1899298/150‑1 (MQ=255) aagaagCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGAAACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCACCCAGATTATATCCCGCGCCTGCCGTGGTTCCTGTCt > 3:416563/1‑151 (MQ=255) aagaagCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGAAACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCAACCAGATTATATCCCGCGCCTGCCGTGGTTCCTGTCt < 8:2021649/151‑1 (MQ=255) agaagCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGATACGGTCGGTTTTCGCCCCCACAAGAACGCAGATAAAACGCAATTGGCCCTGGGTAGCCCACGCACCAACATAATTACCCGCCCGTCCCGTGGtgctgggctc > 3:1799670/1‑142 (MQ=255) agaagCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGATACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCAACCAGATTATATCCCGCGCCTGCCGTGGTTCCTGTCtt > 8:1785214/1‑151 (MQ=255) gaagCGGAAACCCCAGCTCAATAATTTCTCAGACTCATTAAAACGGATACCGTCGGTTTTCGCCCCCAACACTAAGGAGATTAAACGCATATCGCACTGGGTAGCCGAAGCAACCAGATTATATCCCGCGCCTGCCGTCGTTCCTGTCTTc > 2:351955/1‑151 (MQ=255) aagCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGAAACGGTCGGTTTTCGCGCCCAACACTACGGAGATTAAACACATATCGCCCTGGGTAGCCGAAGCAACCAGATTATATCCCGCGCCTGCCGTGCTTCCTGTCTTc > 4:330964/1‑150 (MQ=255) aagCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGAAACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCAACCAGATTATATCCCGCGCCTGCCGTGGTTCCTGTCTTc > 5:1889719/1‑150 (MQ=255) gCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGATACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCAACCAGATTATATCCCGCGCCTGCCGTGGTTCCTGTCTTCATg < 4:166423/151‑1 (MQ=255) cGGAAACCCCACGTCAATAATTTCTCAGACTCATTAAAACGGCTACGGTCGGTGTTCGCCCCCAACACTACGGAGATTAAGCGCATATCGCCCTGGGTAGCCGAAGCAACCAGATTATATCCCGCGCCTGCCGTGGTTCCTGTCTTCATGc < 7:836803/151‑1 (MQ=255) ggAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGAAACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCAACCAGATTATATCCCGCGCCTGCCGTGGTTCCTGTCTTCATGcc > 2:1875234/1‑151 (MQ=255) gAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGAAACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCAACCAGATTATATCCCGCGCCTGCCGTGGTTCCTGTCTTCATGCCa < 7:1167073/151‑1 (MQ=255) aaCCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGATACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCAACCAGATTATATCCCGCGCCTGCCGTGGTTCCTGTCTTCATGCCATc < 6:734656/151‑1 (MQ=255) aaCCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGAAACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCAACCAGATTATATCCCGCGCCTGCCGTGGTTCCTGTCTTCATGCCATc < 5:560783/151‑1 (MQ=255) aaCCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGAAACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCAACCAGATTATATCCCGCGCCTGCCGTGGTTCCTGTCTTCATGCCATc > 6:334232/1‑151 (MQ=255) aaCCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGAAACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCAACCAGATTATATCCCGCGCCTGCCGTGGTTCCTGTCTTCATGCCATc > 7:285543/1‑151 (MQ=255) aCCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGATACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCAACCAGATTATATCCCGCGCCTGCCGTGGTTCCTGTCTTCATGCCATCa < 2:1067231/151‑1 (MQ=255) cAGGTCAATAATTTCTCAGACTCATTAAAACGGAAACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCAACCAGATTATATCCCGCGCCTGCCGTGGTTCCTGTCTTCATGCCATCAACAt > 8:68178/1‑151 (MQ=255) aGGTCAATAATTTCTCAGACTCATTAAAACGGAAACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCAACCAGATTATATCCCGCGCCTGCCGTGGTTCCTGTCTTCATGCCATCAACAtt > 1:1748142/1‑151 (MQ=255) ggTCAATAATTTCTCAGACTCATTAAAACGGAAACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCAACCAGATTATATCCCGCGCCTGCCGTGGTTCCTGTCTTCATGCCATCAACATTc > 8:1012417/1‑151 (MQ=255) ggTCAATAATTTCTCAGACTCATTAAAACGGAAACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCAACCAGATTATATCCCGCGCCTGCCGTGGTTCCTGTCTTCATGCCATCAACATTc < 4:1866507/151‑1 (MQ=255) cAATAATTTCTCAGACTCATTAAAACGGAAACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCAACCAGATTATATCCCGCGCCTGCCGTGGTTCCTGTCTTCATGCCATCAACATTCAGa < 7:176815/151‑1 (MQ=255) aataatTTCTCAGACTCATTAAAACGGATACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCAACCAGATTATATCCCGCGCCTGCCGTGGTTCCTGTCTTCATGCCATCAACATTc > 1:1102511/1‑147 (MQ=255) aatTTCTCAGACTCATTAAAACGGATACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCAACCAGATTATATCCCGCGCCTGCCGTGGTTCCTGTCTTCATGCCATCAACATTCAGATtgc > 4:1950539/1‑151 (MQ=255) aatTTCTCAGACTCATTAAAACGGAAACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCAACCAGATTATATCCCGCGCCTGCCGTGGTTCCTGTCTTCATGCCATCAACATTCTGATtgc > 6:1253479/1‑151 (MQ=255) aatTTCTCAGACTCATTAAAACGGAAACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCAACCAGATTATATCCCGCGCCTGCCGTGGTTCCTGTCTTCATGCCATCAACATTCAGATtgc < 1:833136/151‑1 (MQ=255) atTTCTCAGACTCATTAAAACGGAAACGGTCGGTTTTCGCCCCCAACACCACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCAACCAGATTATATCCCGCGCCTGCCGTGGTTCCTGTCTTCATGCCATCAACATTCAGATtgct > 8:1332763/1‑151 (MQ=255) tttCTCAGACTCATTAAAACGGATACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCAACCAGATTATATCCCGCGCCTGCCGTGGTTCCTGTCTTCATGCCATCAACATTCAGATtgctg > 2:1968496/1‑151 (MQ=255) gcAGACTCATTAAAACGGAAACGGTCGGGTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCAACCAGATTATATCCCGCGCCTGCCGTGGTTCCTGTCTTCATGCCATCAACATTCAGATTGCTGCTcc < 4:982842/150‑1 (MQ=255) cAGACTCATTAAAACGGATACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCAACCAGATTATATCCCGCGCCTGCCGTGGTTCCTGTCTTCATGCCATCAACATTCAGATTGCTGCTcc < 5:463532/150‑1 (MQ=255) tCATTAAAACGGAAACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCAACCAGATTATATCCCGCGCCTGCCGTGGTTCCTGTCTTCATGCCATCAACATTCAGATTGCTGCTCCAcagc > 6:232758/1‑150 (MQ=255) cATTAAAACGGATACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCAACCAGATTATATCCCGCGCCTGCCGTGGTTCCTGTCTTCATGCCATCAACATTCAGATTGCTGCTCCAcagc < 4:440850/149‑1 (MQ=255) aTTAAAACGGATACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCAACCAGATTATATCCCGCGCCTGCCGTGGTTCCTGTCTTCATGCCATCAACATTCAGATTGCTGCTCCAcagc > 7:1641680/1‑148 (MQ=255) tAAAACGGATACGGTCGGTTTTCGCCCCCCACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCAACCAGATTATATCCCGCGCCTGCCGTGGTTCCTGTCTTCATGCCATCAACATTCAGATTGCTGCTCCACAGCAGacg > 2:1785843/1‑151 (MQ=255) tAAAACGGAAACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCAACCAGATTATATCCCGCGCCTGCCGTGGTTCCTGTCTTCATGCCATCAACATTCAGATTGCTGCTCCACAGCAGac < 8:634554/150‑1 (MQ=255) acggatacggTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCAACCAGATTATATCCCGCGCCTGCCGTGGTTCCTGTCTTCATGCCATCAACATTCAGATTGCTGCTCCACAGCAGacggtta < 2:235168/151‑1 (MQ=255) acggaaacggTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCAACCAGATTATATCCCGCGCCTGCCGTGGTTCCTGTCTTCATGCCATCAACATTCAGATTGCTGCTCCACAGCAGacggtta < 4:935638/151‑1 (MQ=255) ggaaacggTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCAACCAGATTATATCCCGCGCCTGCCGTGGTTCCTGTCTTCATGCCATCAACATTCAGATTGCTGCTCCACAGCAGacggttacg > 3:278394/1‑151 (MQ=255) aacggTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCAACCAGATTATATCCCGCGCCTGCCGTGGTTCCTGTCTTCATGCCATCAACATTCAGATTGCTGCTcc < 4:1732609/132‑1 (MQ=255) | GCCCGCTTCACCTGCCCCGAGATTCACTTCGCTCTTATCACCAAACCAGACGCGCTGAGTCACAAAGGTGGCATCAGGTTTAATTGGCGTCACGGTTTCAAAGAAGCGGAAACCCCAGGTCAATAATTTCTCAGACTCATTAAAACGGAAACGGTCGGTTTTCGCCCCCAACACTACGGAGATTAAACGCATATCGCCCTGGGTAGCCGAAGCAACCAGATTATATCCCGCGCCTGCCGTGGTTCCTGTCTTCATGCCATCAACATTCAGATTGCTGCTCCACAGCAGACGGTTACGGT > DH1/2999439‑2999737 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |