Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | DH1 | 899,322 | 0 | T | G | 41.3% | 276.0 / 40.4 | 138 | G384G (GGT→GGG) | yqeF | acetyl‑CoA acetyltransferase |
Reads supporting (aligned to +/- strand): ref base T (10/71); new base G (57/0); total (67/71) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 8.42e-29 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 148 total aligned reads displayed.
GTCGGGTCAATGTCAATGGTGGCGCGATCGCACTCGGTCACCCGATAGGCGCTTCCGGTTGCCGAATCCTGGTTTCTCTGGTTCATGAAATGGTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGCCAGGGTGTGGCATTGACCATTGAACGTGACGAATAGCTCTGCATTTCCTCCTTACCGATAAATATCTGCCGTCATTAATCTGTTGAATAATGATGGCTGGCAAGTCGACATA‑CATTTTCTGGGCTCCCTCATTTTTCCATTCTCATGACATATTC > DH1/899174‑899471 | gTCGGGTCAATGTCAATGGTGGCTCGATCGCACTCGGTCACCCGATAGGCGCTTCCGGTTGCCGAATCCTGGTTTCTCTGGTTCATGAAATGGTGAAACGTAATGCCCGCAAAGGATTGGCAACGCTTTGTATCGGC‑GGGGGGCAGGgtgt < 1:606339/151‑1 (MQ=255) gtcaatgtcaatGGTGGCGCGATCGCACTCGGTCACCCGATAGGCGCTTCCGGTTGCCGAATCCTGGTTTCTCTGGTTCATGAAATGGTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGCCAGGGGGTGGGAt > 2:1521916/1‑151 (MQ=255) gtcaatgGTGGCGCGATCGCACTCGGTCACCCGATAGGCGCTTCCGGTTGCCGAATCCTGGTTTCTCTGGTTCATGAAATGGTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGCCAGGGTGTGGCAtt < 2:131337/146‑1 (MQ=255) caatgGTGGCGCGATCGCACTCGGTCACCCGATAGGCGCTTCCGGTTGCCGAATCCTGGTTTCTCTGGTTCATGAAATGGTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGCCAGGGTGTGGCATTGACCAtt < 2:863999/151‑1 (MQ=255) aatgGTGGCGCGATCGCACTCGGTCACCCGATAGGCGCTTCCGGTTGCCGAATCCTGGTTTCTCTGGTTCATGAAATGGTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGCCAGGGTGTGGCATTGACCATTg < 1:214222/151‑1 (MQ=255) atgGTGGCGCGATCGCACTCGGTCACCCGATAGGCGCTTCCGGTTGCCGAATCCTGGTTTCTCTGGTTCATGAAATGGTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGCCAGGGTGTGGCATTGACCATTGa < 1:1061797/151‑1 (MQ=255) ggCGCGATCGCACTCGGTCACCCGATAGGCGCTTCCGGTTGCCGAATCCTGGTTTCTCTGGTTCATGAAATGGTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGCCAGGGTGTGGCATTGACCATTGAACGt < 1:1892853/150‑1 (MQ=255) ggCGCGATCGCACTCGGTCACCCGATAGGCGCTTCCGGTTGCCGAATCCTGGTTTCTCTGGTTCATGAAATGGTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGCCAGGGTGTGGCATTGACCATTGAACGTg < 2:2310730/151‑1 (MQ=255) gcgATCGCACTCGGTCACCCGATAGGCGCTTCCGGTTGCCGAATCCTGGTTTCTCTGGTTCATGAAATGGTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGCCGGGGGGGGGGATTGTCCCTTGAACGTGACg > 1:1581030/1‑151 (MQ=255) gcgATCGCACTCGGTCACCCGATAGGCGCTTCCGGTTGCCGAATCCTGGTTTCTCTGGTTCATGAAATGGTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGCCAGGGTGTGGCATTGACCATTGAACGTGACg < 2:1035566/151‑1 (MQ=255) gATCGCACTCGGTCACCCGATAGGCGCTTCCGGTTGCCGAATCCTGGTTTCTCTGGTTCATGAAATGGTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGCCAGGGTGTGGCATTGACCATTGAACGTGACGaa < 1:581204/151‑1 (MQ=255) gATCGCACTCGGTCACCCGATAGGCGCTTCCGGTTGCCGAATCCTGGTTTCTCTGGTTCATGAAATGGTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGCCAGGGGGTGGCATTGACCATTGAACGTGACGa > 1:1223436/1‑150 (MQ=255) gCACTCGGTCACCCGATAGGCGCTTCCGGTTGCCGAATCCTGGTTTCTCTGGTTCATGAAATGGTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGCCAGGGTGTGGCATTGACCATTGAACGTGACGAATAGc < 2:2066577/151‑1 (MQ=255) gCACTCGGTCACCCGATAGGCGCTTCCGGTTGCCGAATCCTGGTTTCTCTGGTTCATGAAATGGTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGCCAGGGGGGGGGATTGACCATTTAACGGGACGaaaaa > 2:2166600/1‑147 (MQ=255) aCTCGGTCACCCGATAGGCGCTTCCGGTTGCCGAATCCTGGTTTCTCTGGTTCATGAAATGGTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGGCGGGGGGGGGGATTGACAACTGAACGTGGCGAATAggt > 1:1404388/1‑148 (MQ=255) aCTCGGTCACCCGATAGGCGCTTCCGGTTGCCGAATCCTGGTTTCTCTGGTTCATGAAATGGTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGCCAGGGTGTGGCATTGACCATTGAACGTGACGAATAGct < 2:1404393/150‑1 (MQ=255) cTCGGTCACCCGATAGGCGCTTCCGGTTGCCGAATCCTGGTTTCTCTGGTTCATGAAATGGTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGCCAGGGTGTGGCATTGa < 2:34746/127‑1 (MQ=255) cGGTCACCCGATAGGCGCTTCCGGTTGCCGAATCCTGGTTTCTCTGGTTCATGAAATGGTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGCCAGGGTGTGGCATTGACCATTGAACGTGACGAATAGctct < 1:1646476/149‑1 (MQ=255) cACCCGATAGGCGCTTCCGGTTGCCGAATCCTGGTTTCTCTGGTTCATGAAATGGTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGCCAGGGTGTGGCATTGACCATTGAACGTGACGAATAGCTCTGCAttt < 1:2320043/151‑1 (MQ=255) aCCCGATAGGCGCTTCCGGTTGCCGAATCCTGGTTTCTCTGGTTCATGAAATGGTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGCCAGGGtgtg < 2:132030/113‑1 (MQ=255) tAGGCGCTTCCGGTTGCCGAATCCTGGTTTCTCTGGTTCATGAAATGGTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGCCAGGGTGTGGCATTGACCATTGaa < 2:1979879/122‑1 (MQ=255) aGGCGCTTCCGGTTGCCGAATCCTGGTTTCTCTGGTTCATGAAATGGTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGAAAGGGGGCGGAATTGGCCATTGTACGTGGGGAAAAGAGCTGGTATTCCTCCttt > 1:936393/1‑150 (MQ=255) cgcTTCCGGTTGCCGAATCCTGGTTTCTCTGGTTCATGAAATGGTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGCCCGGGGGTGGCAATGACCATTTAACCTGACGAAAAACTCTGCCTTTCCTCCTTAccc > 2:2224854/1‑150 (MQ=255) tCCGGTTGCCGAATCCTGGTTTCTCTGGTTCATGAAATGGTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGCCAGGGTGTGGCATTGACCATTGAACGTGACGAATAGCTCTGCATTTCCTCCTTACCGATa < 2:423311/150‑1 (MQ=255) ttGCCGAATCCTGGTTTCTCTGGTTCATGAAATGGTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGCCAGGGTGTGGCATTGACCATTGAACGTGACGAATAGCTCTGCAtt < 1:1479251/130‑1 (MQ=255) ccGAATCCTGGTTTCTCTGGTTCATGAAATGGTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGCCAGGGTGTGGCATTGACCATTGAACGTGACGAATAGCTCTGCATTTCCTCCTTACCGATAAATATCTGc < 2:1633270/151‑1 (MQ=255) cGAATCCTGGTTTCTCTGGTTCATGAAATGGTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGCCAGGGGGTGGCATTGACCATTTAACGTGACGAATAGCTCTGCATTTTCTCCTTACCGATAAATATTTGcc > 2:402613/1‑151 (MQ=255) gAATCCTGGTTTCTCTGGTTCATGAAATGGTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGGCAGGGGGGGGGATTGACCCTTTAAAGTGACGAAAAGCTCTGCATTTCCTCCTTACCGATAAATATCTGCCg > 2:1838826/1‑151 (MQ=255) aaTCCTGGTGTCTCTGGTTCATGAAATGGTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGCCAGGGTGTGGCATTGACCATTGAACGTGACGAATAGCTCTGCATTTCCTCCTTACCGATAAATATCTGCCGt < 1:1740154/151‑1 (MQ=255) aTCCTGGTTTCTCTGGTTCATGAAATGGTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGCCCAGGGGGGGGAATGACCATTGAACGCGACGAAAAACCCTTCATTTTCTCCCTACCGATAAATATCTTCCGTc > 2:1879678/1‑151 (MQ=255) tCCTGGTTTCTCTGGTTCATGAAATGGTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGGCAGGGGGTGGCATTGACCCTTTAACGTGACGAATAGGTCTGCATTtcctcc > 1:258660/1‑128 (MQ=255) tCCTGGTTTCTCTGGTTCATGAAATGGTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGCCAGGGTGTGGCATTGACCATTGAACGTGACGAATAGCTCTGCATTtcctcc < 2:258659/128‑1 (MQ=255) tCCTGGTTTCTCTGGTTCATGAAATGGTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGCCAGGGGGGGGCATTGACCATTGAAAGTGACGAATAACTCTGCATTTTCTCCTTACCGATAAATATCTGCCGTc > 1:420169/1‑150 (MQ=255) ggTTTCTCTGGTTCATGAAATGGTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGCCAGGGTGTGGCATTGACCATTGAACGTGACGAATAGCTCTGCATTTCCTCCTTACCGATAAATATCTGCCGTCATTa < 1:2217197/150‑1 (MQ=255) ggTTTCTCTGGTTCATGAAATGGTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGCCAGGGTGTGGCATTGACCATTGAACGTGACGAATAGCTCTGCATTTCCTCCTTACCGATAAATATCTGCCGTCATTa < 2:1911765/150‑1 (MQ=255) gTTTCTCTGGTTCATGAAATGGTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGCGGGGGGCCAGGCGGGGGC‑GTGACCCCTGAAAGTGACCAAAAGGTCTGCCTTTTCTCCTTACCGATAAATAACTTcccgcctttat > 1:1007089/1‑142 (MQ=255) gTTTCTCTGGTTCATGAAATGGTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGCCAGGGTGTGGCATTGACCATTGAACGTGACGAATAGCTCTGCATTTCCTCCTTACCGATAAATATCTGCCGTCATTAAt < 1:425600/151‑1 (MQ=255) tttCTCTGGTTCATGAAATGGTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGGCCGGGGGGGGGATTTACCATTTAACGTGACGAAAAACTCTGCATTTTCTCCTTACCGCTAAATATTTGCCGTCATTAATc > 1:1185756/1‑151 (MQ=255) ttCTCTGGTTCATGAAATGGTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGCCAGGGTGTGGCATTGACCATTGAACGTGACGAATAGCTCTGCATTTCCTCCTTACCGATAAATATCTGCCGTCATTAATc < 2:1204184/150‑1 (MQ=255) tctcTGGTTCATGAAATGGTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGCCCGGGTGGGGCCTTTACCACTTAACGGAACGAAAAGATCTGCCTTTTCTCCTTTCCCATAAATATATGCCGTCATTAATCTg > 2:2632091/1‑151 (MQ=255) tctcTGGTTCATGAAATGGTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGCCAGGGGGTGGGATTTACCATTTAACGTGACGAAAAGCTCTGCATTTTCTCCTTACCGATAAATATCTTCCGTCATTAATCtt > 2:390686/1‑150 (MQ=255) tGGTTCATGAAATGGTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGCCAGGGGGGGGCATTGACCATTTAACGTGACGAAAAGCTCTGCATTTTCTCCTTACCGATAAATATCTGCCGTCATTAATCTGTTg > 2:755583/1‑150 (MQ=255) gTTCATGAAATGGTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGCCAGGGTGTGGCATTGACCATTGAACGTGACGAATAGCTCTGCATTTCCTCCTTACCGATAAATATCTGCCGTCATTAATCTGTTGaat < 1:48447/151‑1 (MQ=255) gTTCATGAAATGGTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGCCAGGGTGTGACATTGACCATTGAACGTGACGAATAGCTCTGCATTTCCTCCTTACCGATAAATATCTGCCGTCATTAATCTGTTGaat < 1:2632075/151‑1 (MQ=255) ttCATGAAATGGTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGCCAGGGGGTGGCATTTAACATTTAAAGTGACGAATAACTCTGCATTTCCTCCTTTCCCCTAAATATTTGCCGTCATTAATATTTTGaat > 1:944451/1‑150 (MQ=255) cATGAAATGGTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGCCAGGGGGGGGCATTGACCATTTAACGTGACGAATAGCTCTGCATTTCCTCCTTACCGATAAATATCTGCCGTCATTAATCTGTTGaataat > 2:41612/1‑151 (MQ=255) gAAATGGTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGGCAGGGGGGGGCATTGACCATTTAACGTGACGAAAAGCTCTGCATTTCCTCCTTACCGATAAATATCTGCCGTCATTAATCTGTTGAATAatgat > 2:2468876/1‑151 (MQ=255) aaaTGGTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGGCAGGGGGTGGGATTGGCCATTGAACGTGACGAAAAGCTCTGCATTTTCTCCTTACCGATAAATATCTGCCGTCCTTTATCTGTTtaataaatatt > 1:2361781/1‑146 (MQ=255) aaaTGGTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGCCAGGGTGTGGCATTGACCATTGAACGTGACGAATAGCTCTGCATTTCCTCCTTACCGATAAATATCTGCCGTCATTAATCTGTTGAATAatgatg < 2:2527383/151‑1 (MQ=255) aaTGGTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGGCAGGGGGTGGCATTGACCATTTAACGTGACGAAAAGCTCTGCATTTTCTCCTTACCGATAAATATTTGCCGTCATTAATCTGTTGaat > 2:89054/1‑143 (MQ=255) aaTGGTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGCCAGGGTGTGGCATTGACCATTGAACGTGACGAATAGCTCTGCATTTCCTCCTTACCGATAAATATCTGCCGt < 2:1185800/127‑1 (MQ=255) ggTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGCCAGGGTGTGGCATTGACCATTGAACGTGACGAATAGCTCTGCATTTCCTCCTTACCGATAAATATCTGCCGTCATTAATCTGTTGAATAATGAtggct < 2:1581035/150‑1 (MQ=255) ggTGAAACGTAATGCCCGCAAAGGACTGGCAACGCGTTGTATCGGC‑GGGGGGCCGGGGGTGGCATTGACCATTTAACGTGACGAAAAACTCTGCATTTTCTCCTTACCGATAAAAATCTTCCGGCATTAATCTGTTGaataagaaccga > 2:2467627/1‑142 (MQ=255) ggTGAAACGTAATGCCCGCAAAGGACTGGCAACGCGTTGTATCGGC‑GGGGGCCAGGGTGTGGCATTGACCATTGAACGTGACGAATAGCTCTGCATTTCCTCCTTACCGATAAATATCTGCCGTCATTAATCTGTTGaata < 1:2467615/141‑1 (MQ=255) gTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGGCAGGGGGGGGGACTGACCAATGGACGAGAAGAAAAACCTTGCATTTTCTCCTTACCGATAAAAATTTGCCGTCCTTTATCTTTTTAATAATGAaggctgg > 1:1790440/1‑151 (MQ=255) gAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGCCAGGGTGTGGCATTGACCATTGAACGTGACGAATAGCTCTGCATTTCCTCCTTACCGATAAATATCTGCCGTCATTAATCTGTTGAATAATGATGGCTGGCa < 1:22745/151‑1 (MQ=255) aaaCGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGCCAGGGTGTGGCATTGACCATTGAACGTGACGAATAGCTCTGCATTTCCTCCTTACCGATAAATATCTGCCGTCATTAATCTGTTGaataa < 1:263756/138‑1 (MQ=255) aaCGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGCCAGGGTGTGGCATTGACCATTGAACGTGACGAATAGCTCTGCATTTCCTCCTTACCGATAAATATCTGCCGTCATTAATCTGTTGAATAATGATGGCTGGCAAg < 1:1838821/151‑1 (MQ=255) cGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGCCGGGGGGTGGCATTTACCATTTAACGGTGCGAATAGCTCTGCCTTTCCTCCTTACCCGTAAATATCTTCCGTCATTAATTTGTTGAATAATGATGGCTGGCAAGTc > 1:830801/1‑151 (MQ=255) gTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGGCCGGGGGGGGGATTGACCCTTTAACCTGACGAAAAGCTCTTCATTTTCTCCTTACCGATAAATATCTGCCGTCATTAATCTTTTGAATAATGATTGCTGGCAAGTCg > 2:1782369/1‑151 (MQ=255) aTGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGCCAGGGGGTGGGCTTTAACATTGAAAGTGACGAAAAGCTCTGCATTTTCTCCTTACCGATAAATATCTGCCGTCATTAATCTGTTGAATAATGATGGCTGGCAAGTCGac > 2:299596/1‑150 (MQ=255) tGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGCCCGGGGGGGGGATTGACCATTGAACGGGACGAAAAGCTCTGCACTTTCTCCTTACCCATAAATATCTTCCGGCATTAATCTTTTTAATAATTATGGGTGGGAAATCGacat > 2:1803968/1‑151 (MQ=255) gCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGGCCGGGGGGGGGATTGACCATTGAACGCGACGAAAAGCTCTTCATTTTCTTCTTTCCCATAAAAATATTCCGGCATTAAATTTTTGTATAATTAtggcagagcggaagagggg > 1:1513851/1‑136 (MQ=255) gCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGCCAGGGTGTGGCATTGACCATTGAACGTGACGAATAGCTCTGCATTTCCTCCTTACCGATAAATATCTGCCGTCATTAATCTGTTGAATAATGAtggc < 2:1513856/136‑1 (MQ=255) ccGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGCCAGGGTGTGGCATTGACCATTGAACGTGACGAATAGCTCTGCATTTCCTCCTTACCGATAAATATCTGCCGTCATTAATCTGTTGAATAATGATGGCTGGCAAGTc < 2:746509/143‑1 (MQ=255) gCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGGCAGGGGGGGGCATTGAACACTGAAAGTGACGAATAGATCTGCATTTTCTTCTTACCGATAAAAAATTGCCGTCATTAATATGTTGAATAATGATGGCTGGCAAGTCGACATA‑CAtt > 1:357674/1‑151 (MQ=255) aaaGGACTGGCAACGCTTTGTATCGGC‑GGGGGGCCGGGGGTGGGATTGAGCATTTAAAGGGACGAATAACTCTGCCTTTCCTCCCTCCCCATAAATAATTGCCGCCCTTAATCTGTTGAATAATGATGGCTGGCAAGTCGGCATA‑CAtttt > 2:2491470/1‑151 (MQ=255) aaaGGACTGGCAACGCTTTGTATCGGC‑GGGGGCCCGGGGGGGGGATTTACCATTTAAAGTGACGAATAGCTCTGCCTTTTCTCCTTACCGATAAAAATCTGCCGTCATTAATCTGTTGAATAATGATGGCTGGGAAGTCGACATA‑CAtttt > 2:534277/1‑151 (MQ=255) aaaGGACTGGCAACGCTTTGTATCGGC‑GGGGGCCAGGGTGTGGCATTGACCATTGAACGTGACGAATAGCTCTGCATTTCCTCCTTACCGATAAATATCTGCCGTCATTAATCTGTTGAATAATGATGGCTGGCAAGTCGACATA‑CAtttt < 1:2452942/151‑1 (MQ=255) aGGACTGGCAACGCTTTGTATCGGC‑GGGGGCCAGGGTGTGGCATTGACCATTGAACGTGACGAATAGCTCTGCATTTCCTCCTTACCGATAAATATCTGCCGTCATTAATCTGTTGAATAatg < 2:2345507/123‑1 (MQ=255) gACTGGCAACGCTTTGTATCGGC‑GGGGGCCAGGGTGTGGCATTGACCATTGAACGTGACGAATAGCTCTGCATTTCCTCCTTACCGATAAATATCTGCCGTCATTAATCTGTTGAATAATGATGGCTGGCAAGTc < 2:1566207/135‑1 (MQ=255) gACTGGCAACGCTTTGTATCGGC‑GGGGGCCAGGGTGTGGCATTGACCATTGAACGTGACGAATAGCTCTGCATTTCCTCCTTACCGATAAATATCTGCCGTCATTAATCTGTTGAATAATGATGGCTGGCAAGTCGACATA‑CATTTTCTgg < 1:2468864/151‑1 (MQ=255) aCTGGCAACGCTTTGTATCGGC‑GGGGGCCCGGGGGGGGGCTTGACCATTTGACGTGACGAAAAGGTCTGCCTTTCCTCCCTACCGATAAATATCTGGCGCCCTTAATCTGTTGAATAAAGATGGCTGGCAAGTCGACCTACCATTTTTTgg > 2:2507868/1‑151 (MQ=255) cTGGCAACGCTTTGTATCGGC‑GGGGGCCCGGGGGTGGCATTGACCATTTAACGTGACGAAAAGCTCTGCATTTTCTCCTTACCGATAAATATCTGCCGTCATTAATCTGTTGGATAATGATGGCTGGCAAGTCGACATA‑CAtttttttggg > 2:2255175/1‑145 (MQ=255) ggCAACGCTTTGTATCGGC‑GGGGGCCAGGGTGTGGCATTGACCATTGAACGTGACGAATAGCTCTGCATTTCCTCCTTACCGATAAATATCTGCCGTCATTAATCTGTTGAATAATGATGGCTGGCAAGTCGACATA‑CATTTTCTGGGc < 1:755582/149‑1 (MQ=255) ggCAACGCTTTGTATCGGC‑GGGGGCCAGGGTGTGGCATTGACCATTGAACGTGACGAATAGCTCTGCATTTCCTCCTTACCGATAAATATCTGCCGTCATTAATCTGTTGAATAATGATGGCTGGCAAGTCGACATA‑CATTTTCTGGGc < 2:1007090/149‑1 (MQ=255) ggCAACGCTTTGTATCGGC‑GGGGGCCAGGGTGTGGCATTGACCATTGAACGTGACGAATAGCTCTGCATTTCCTCCTTACCGATAAATATCTGCCGTCATTAATCTGTTGAATAATGATGGCTGGCAAGTCGACATA‑CATTTTCTGGGCt < 2:1513897/150‑1 (MQ=255) ggCAACGCTTTGTATCGGC‑GGGGGCCAGGGTGTGGCATTGACCATTGAACGTGACGAATAGCTCTGCATTTCCTCCTTACCGATAAATATCTGCCGTCATTAATCTGTTGAATAATGATGGCTGGCAAGTCGACATA‑CATTTTCTGGGCTc < 1:366636/151‑1 (MQ=255) ggCAACGCTTTGTATCGGC‑GGGGGCCAGGGTGGGGCATTGACCATTGAAAGTGACGAAAAGCTCTGCATTTTCTCCTTACCGATAAATATCTGCCGTCATTAATCTGTTGAATAATGATGGCTGGCAAGTCGACATA‑CATTTTCTTGGCTc > 2:2598936/1‑151 (MQ=255) cAACGCTTTGTATCGGC‑GGGGGCCAGGGTGTGGCATTGACCATTGAACGTGACGAATAGCTCTGCATTTCCTCCTTACCGATAAATATCTGCCGTCATTAATCTGTTGAATAATGATGGCTGGCAAGTCGACATA‑CATTTTCTGGGCTccc < 2:357673/151‑1 (MQ=255) aCGCTTTGTATCGGC‑GGGGGCCAGGGGGGGGGATTGTCCCTTTAACGTGAGGAATAACTCTGCATTTTCTCCTTACCGATTAAAATATGCCGGCATTAATATGGTTGATAATGATGGGTGGGGAGACGACATA‑AATTTTCTTGGGTccccc > 1:181672/1‑149 (MQ=255) aCGCTTTGTATCGGC‑GGGGGACAGGGGGTGGGAGTTTCCCTTTAAAGCGGAGAACAGCTCCGCATTTTCTCCTTTCCCAAAAAAATCTGTCGCCATTAATTTGTTGAATAATAATTGCTGGGAAGTCGACATA‑CATTTTTTGGGCTccccc > 1:2283414/1‑149 (MQ=255) gCTTTGTATCGGC‑GGGGGGCAGGGGGTGGCATTTAACATTTAACGTGACGAATAGCTCTGCATTTTCTCCCTACCGATAAATATTTGCCGGCATTAATCTGTTGAATAATGATGGGTGGCAAGTCGACATA‑AATTTTTTTGGGTCCCTCAt > 1:1957036/1‑151 (MQ=255) ttGTATCGGC‑GGGGGCCAGGGTGTGGCATTGACCATTGAACGTGACGAATAGCTCTGCATTTCCTCCTTACCGATAAATATCTGCCGTCATTAATCTGTTGAATAATGATGGCTGGCAAGTCGACATA‑CATTTTCTGGGCTCCCTCAtt < 2:2283423/149‑1 (MQ=255) gTATCGGC‑GGGGGCCAGGGTGTGGCATTGACCATTGAACGTGACGAATAGCTCTGCATTTCCTCCTTACCGATAAATATCTGCCGTCATTAATCTGTTGAATAATGATGGCTGGCAAGTCGACATA‑CATTTTCTGGGCTCCCTCATTTTTc < 2:944452/151‑1 (MQ=255) ggc‑ggGGGCCAGGGTGTGGCATTGACCATTGAACGTGACGAATAGCTCTGCATTTCCTCCTTACCGATAAATATCTGCCGTCATTAATCTGTTGAATAATGATGGCTGGCAAGTCGACATA‑CATTTTCTGGGCTCCCTCATTTTTCCATtc > 1:2298161/1‑151 (MQ=255) c‑ggGGGCCAGGGTGTGGCATTGACCATTGAACGTGACGAATAGCTCTGCATTTCCTCCTTACCGATAAATATCTGCCGTCATTAATCTGTTGAATAATGATGGCTGGCAAGTCGACATA‑CATTTTCTGGGCTCCCTCATTTTTCCATtctc < 2:2281744/151‑1 (MQ=255) c‑ggGGGCCAGGGTGTGGCATTGACCATTGAACGTGACGAATAGCTCTGCATTTCCTCCTTACCGATAAATATCTGCCGTCATTAATCTGTTGAATAATGATGGCTGGCAAGTCGACATA‑CATTTTCTGGGCTCCCTCATTTTTCCATtctc < 1:2507856/151‑1 (MQ=255) gggCCAGGGTGTGGCATTGACCATTGAACGTGACGAATAGCTCTGCATTTCCTCCTTACCGATAAATATCTGCCGTCATTAATCTGTTGAATAATGATGGCTGGCAAGTCGACATA‑CATTTTCTGGGCTCCCTCATTTTTCCATTCTCATg > 1:703641/1‑151 (MQ=255) gCCAGGGTGTGGCATTGACCATTGAACGTGACGAATAGCTCTGCATTTCCTCCTTACCGATAAATATCTGCCGTCATTAATCTGTTGAATAATGATGGCTGGCAAGTCGACATA‑CATTTTCTGGGCTCCCTCAt > 1:1573621/1‑134 (MQ=255) gCCAGGGTGTGGCATTGACCATTGAACGTGACGAATAGCTCTGCATTTCCTCCTTACCGATAAATATCTGCCGTCATTAATCTGTTGAATAATGATGGCTGGCAAGTCGACATA‑CATTTTCTGGGCTCCCTCATTTTTCCATTCTCATGAc < 2:2622236/151‑1 (MQ=255) ccAGGGTGTGGCATTGACCATTGAACGTGACGAATAGCTCTGCATTTCCTCCTTACCGATAAATATCTGCCGTCATTAATCTGTTGAATAATGATGGCTGGCAAGTCGACATA‑CATTTTCTGGGCTCCCTCATTTTTCCATTCTCATGAc > 2:949469/1‑150 (MQ=255) cAGGGTGTGGCATTGACCATTGAACGTGACGAATAGCTCTGCATTTCCTCCTTACCGATAAATATCTGCCGTCATTAATCTGTTGAATAATGATGGCTGGCAAGTCGACATA‑CATTTTCTGGGCTCCCTCATTTTTCCATTCTCATGACat > 2:2641185/1‑151 (MQ=255) aGGGTGTGGCATTGACCATTGAACGTGACGAATAGCTCTGCATTTCCTCCTTACCGATAAATATCTGCCGTCATTAATCTGTTGAATAATGATGGCTGGCAAGTCGACATA‑CATTTTCTGGGCTCCCTCATTTTTCCATTCTCATGACata < 2:1773674/151‑1 (MQ=255) ggTGTGGCATTGACCATTGAACGTGACGAATAGCTCTGCATTTCCTCCTTACCGATAAATATCTGCCGTCATTAATCTGTTGAATAATGATGGCTGGCAAGTCGACATA‑CATTTTCTGGGCTCCCTCATTTTTCCATTCTCATGACat < 2:2126689/148‑1 (MQ=255) ggTGTGGCATTGACCATTGAACGTGACGAATAGCTCTGCATTTCCTCCTTACCGATAAATATCTGCCGTCATTAATCTGTTGAATAATGATGGCTGGCAAGTCGACATA‑CATTTTCTGGGCTCCCTCATTTTTCCATTCTCATGACat > 1:2126681/1‑148 (MQ=255) gtgtGGCATTGACCATTGAACGTGACGAATAGCTCTGCATTTCCTCCTTACCGATAAATATCTGCCGTCATTAATCTGTTGAATAATGATGGCTGGCAAGTCGACATA‑CATTTTCTGGGCTCCCTCATTTTTCCATTCTCATGACATATTc > 2:567915/1‑151 (MQ=255) gtgtGGCATTGACCATTGAACGTGACGAATAGCTCTGCATTTCCTCCTTACCGATAAATATCTGCCGTCATTAATCTGTTGAATAATGATGGCTGGCAAGTCGACATA‑CATTTTCTGGGCTCCCTCATTTTTCCATTCTCATGACATATTc < 1:2499642/151‑1 (MQ=255) gtgtGGCATTGACCATTGAACGTGACGAATAGCTCTGCATTTCCTCCTTACCGATAAATATCTGCCGTCATTAATCTGTTGAATAATGATGGCTGGCAAGTCGACATA‑CATTTTCTGGGCTCCCTCATTTTTCCATTCTCATGACATATTc < 1:1782364/151‑1 (MQ=255) tgtgGCATTGACCATTGAACGTGACGAATAGCTCTGCATTTCCTCCTTACCGATAAATATCTGCCGTCATTAATCTGTTGAATAATGATGGCTGGCAAGTCGACATA‑CATTTTCTGGGCTCCCTCAtttt > 1:2564763/1‑130 (MQ=255) | GTCGGGTCAATGTCAATGGTGGCGCGATCGCACTCGGTCACCCGATAGGCGCTTCCGGTTGCCGAATCCTGGTTTCTCTGGTTCATGAAATGGTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGC‑GGGGGCCAGGGTGTGGCATTGACCATTGAACGTGACGAATAGCTCTGCATTTCCTCCTTACCGATAAATATCTGCCGTCATTAATCTGTTGAATAATGATGGCTGGCAAGTCGACATA‑CATTTTCTGGGCTCCCTCATTTTTCCATTCTCATGACATATTC > DH1/899174‑899471 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |