Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | DH1 | 140,106 | 0 | T | G | 36.7% | 303.3 / 30.4 | 139 | T309P (ACC→CCC) | yiaK | 2,3‑diketo‑L‑gulonate reductase |
Reads supporting (aligned to +/- strand): ref base T (16/72); new base G (51/0); total (67/72) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 3.36e-24 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 146 total aligned reads displayed.
AGCGCCTTTTCAATGGCGGCGGGCAAACGGCACGGATTGGGCTGCGCGATATGTCCAAAAATCATGACTTATCTCCTCATAACGCCTGGATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTCGGCCAGCAGGGTAGT‑AAATTCA‑TG‑GCCGGGTA‑AGCGAATGGCCTGATTTTCGTCAGCACGCTCGGCACTAGTAACGTAATCCATGATGCGTTGCAGCTTGGCATCGCGGGTGGGACCGTCGATAAGCTTGTCCACTTCAATGGCAATAAAAATTTGTGAA > DH1/139956‑140254 | aGCGCCTTTTCAATGGCGGCGGGCAAACGGCACGGATTGGGCTGCGCGATATGTCCAAAAATCATGACTTATCTCCTCATAACGCCTGGATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTCGGCCAGCAGGgt < 1:1952667/151‑1 (MQ=255) aGCGCCTTTTCAATGGCGGCGGGCAAACGGCACGGATTGGGCTGCGCGATATGTCCAAAAATCATGACTTATCTCCTCATAACGCCTGGATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTCGGCCAGCAGGgt < 2:783739/151‑1 (MQ=255) aGCGCCTTTTCAATGGCGGCGGGCAAACGGCACGGATTGGGCTGCGCGATATGTCCAAAAATCATGACTTATCTCCTCATAACGCCTGGATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTCGGCCAGCAGGgt < 1:80039/151‑1 (MQ=255) cTTTTCAATGGCGGCGGGCAAACGGCACGGATTGGGCTGCGCGATATGTCCAAAAATCATGACTTATCTCCTCATAACGCCTGGATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTTTGCCCGCCGGggagga > 1:2136493/1‑148 (MQ=255) tttCAATGGCGGCGGGCAAACGGCACGGATTGGGCTGCGCGATATGTCCAAAAATCATGACTTATCTCCTCATAACGCCTGGATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTCTGCCCGCCGGGGAGG‑aaa > 1:2206887/1‑150 (MQ=255) cAATGGCGGCGGGCAAACGGCACGGATTGGGCTGCGCGATATGTCCAAAAATCATGACTTATCTCCTCATAACGCCTGGATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTCGGCCAGCAGGGTAGT‑AAATTCa < 1:478300/151‑1 (MQ=255) cAATGGCGGCGGGCAAACGGCACGGATTGGGCTGCGCGATATCTCCAAAAATCATGACTTATCTCCTCATAACGCCTGGATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTTGGCCAGCAGGGGAGT‑AAAttt > 2:2275/1‑149 (MQ=255) aTGGCGGCGGGCAAACGGCACGGATTGGGCTGCGCGATATGTCCAAAAATCATGACTTATCTCCTCATAACGCCTGGATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTTTGCCAGCAGGGGAGT‑AAAATCA‑tt > 2:1061981/1‑150 (MQ=255) tGGCGGCGGGCAAACGGCACGGATTGGGCTGCGCGATATGTCCAAAAATCATGACTTATCTCCTCATAACGCCTGGATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTCGGCCAGCAGGGGAGT‑AAATTCA‑Tg‑g > 2:2585364/1‑151 (MQ=255) cggGCAAACGGCACGGATTGGGCTGCGCGATATGTCCAAAAATCATGACTTATCTCCTCATAACGCCTGGATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTCGGCCAGCAGGGTAGT‑AAATTCA‑TG‑GCCGGGt < 2:277567/151‑1 (MQ=255) ggCAAACGGCACGGATTGGGCTGCGCGATATGTCCAAAAATCATGACTTATCTCCTCATAACGCCTGGATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTCGGCCAGCAGGGTAGT‑AAATTCA‑TG‑GCCGGGTa‑a < 2:2533747/151‑1 (MQ=255) cAAACGGCACGGATTGGGCTGCGCGATATGTCCAAAAATCATGACTTATCTCCTCATAACGCCTGGATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTCGGCCCACAGGGTAGG‑AAAATCA‑TG‑GCCGGGGA‑Agg > 2:510962/1‑150 (MQ=255) cGGCACGGATTGGGCTGCGCGATATGTCCAAAAATCATGACTTATCTCCTCATAACGCCTGGATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTCGGCCAGCAGGGTAGT‑AAATTCA‑TG‑GCCGGGTA‑AGCGAAt < 1:2059251/151‑1 (MQ=255) ggCACGGATTGGGCTGCGCGATATGTCCAAAAATCATGACTTATCTCCTCATAACGCCTGGATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTCGGCCAGCAGGGTAGT‑AAATTCA‑TG‑GCCGGGTA‑AGCGAATg < 2:348801/151‑1 (MQ=255) ggCACGGATTGGGCTGCGCGATATGTCCAAAAATCATGACTTATCTCCTCATAACGCCTGGATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTCGGCCAGCAGGGTAGT‑AAATTCA‑TG‑GCCGGGTA‑AGCGAATg < 2:1014250/151‑1 (MQ=255) aCGGATTGGGCTGCGCGATATGTCCAAAAATCATGACTTATCTCCTCATAACGCCTGGATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTTGGCCAGCAGGGGAGT‑AAATTCA‑TG‑GCCGGGGA‑AGCGAATGGcc > 2:1281374/1‑151 (MQ=255) aTTGGGCTGCGCGATATGTCCAAAAATCATGACTTATCTCCTCATAACGCCTGGATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTCGGCCAGCAGGGTAGT‑AAATTCA‑TG‑GCCGGGTA‑AGCGAATGGCCTGAt < 2:2095728/151‑1 (MQ=255) tGGGCTGCGCGATATGTCCAAAAATCATGACTTATCTCCTCATAACGCCTGGATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTTGGCCAGCAGGGGAGT‑AAATTCA‑TG‑GCCGGGGA‑AGCGAATGGGCTGAttt > 2:889661/1‑151 (MQ=255) tGGGCTGCGCGATATGTCCAAAAATCATGACTTATCTCCTCATAACGCCTGGATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTCGGCCAGCAGGGTAGT‑AAATTCA‑TG‑GCCGGGTA‑AGCGAATGGCCTGAtt < 1:713228/150‑1 (MQ=255) ggCTGCGCGATATGTCCAAAAATCATGACTTATCTCCTCATAACGCCTGGATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTTGGCCCGCCGGGGAGG‑AAAATTA‑TG‑GGCGGGGA‑AGGGGAAGGGCTGGttttt > 2:1085213/1‑150 (MQ=255) gcgcGATATGTCCAAAAATCATGACTTATCTCCTCATAACGCCTGGATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTCGGCCAGCAGGGTAGT‑AAATTCA‑TG‑GCCGGGTA‑AGCGAATGGCCTGATTTTCGTCa < 2:2199749/151‑1 (MQ=255) gcgcGATATGTCCAAAAATCATGACTTATCTCCTCATAACGCCTGGATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTCGGCCAGCAGGGTAGT‑AAATTCA‑TG‑GCCGGGAA‑AGCGAATGGCCTGATTTTCGTc < 1:1848292/150‑1 (MQ=255) gcgATATGTCCAAAAATCATGACTTATCTCCTCATAACGCCTGGATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTCTGCCCGCAGGGGAGT‑AAATTCA‑TG‑GCCGGGGA‑AGCGAATGGCCTGATTTTTTTCAGc > 2:1593971/1‑151 (MQ=255) gcgATATGTCCAAAAATCATGACTTATCTCCTCATAACGCCTGGATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTCGGCCAGCAGGGTAGT‑AAATTCA‑TG‑GCCGGGTA‑AGCGAATGGCCTGATTTTCGTCAGc < 2:2206896/151‑1 (MQ=255) cgATATGTCCAAAAATCATGACTTATCTCCTCATAACGCCTGGATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTCGGCCAGCAGGGGAGG‑AAAATTA‑TG‑GCCGGGGA‑AGCGGATGGGCTGATTTTTTTCAGc > 2:842997/1‑150 (MQ=255) atatGTCCAAAAATCATGACTTATCTCCTCATAACGCCTGGATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTTGGCCAGCAGGGGAGT‑AAATTCA‑TG‑GCCGGGGA‑AGCGGATGGCCTGATTTTTGTCAGCaac > 2:1953552/1‑149 (MQ=255) atatGTCCAAAAATCATGACTTATCTCCTCATAACGCCTGGATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTTGGCCAGCAGGGGAGT‑AAAATTA‑TG‑GGCGGGGA‑AGCGAAAGGGCTGATTTTTGTCATCAcc > 1:1285081/1‑150 (MQ=255) tatGTCCAAAAATCATGACTTATCTCCTCATAACGCCTGGATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTTTGCCAGCAGGGGAAG‑AAAATCA‑TG‑GGCGGGGG‑AGGGAATGGCCTGGtttttttccgcccgc > 2:1342174/1‑140 (MQ=255) tGTCCAAAAATCATGACTTATCTCCTCATAACGCCTGGATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTTGGCCCGCAGGGGAGG‑AAAATCA‑TT‑GCCGGGGA‑AGCGAATGGGCTGAttttt > 1:861015/1‑138 (MQ=255) cAAAAATCATGACTTATCTCCTCATAACGCCTGGATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTCGGCCAGCAGGGTAGT‑AAATTCA‑TG‑GCCGGGTA‑AGCGAATGGCCTGATTTTCGTCAGCACGCTCGGCa < 2:2131060/151‑1 (MQ=255) aaaaTCATGACTTATCTCCTCATAACGCCTGGATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTCGGCCAGCAGGGTAGT‑AAATTCA‑TG‑GCCGGGTA‑AGCGAATGGCCTGATTTTCGTCAGCACGCTCGGCACt < 2:698966/151‑1 (MQ=255) aaaTCATGACTTATCTCCTCATAACGCCTGGATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTCGGCCAGCAGGGTAGT‑AAATTCA‑TG‑GCCGGGTA‑AGCGAATGGCCTGATTTTc < 1:1527125/132‑1 (MQ=255) aaTCATGACTTATCTCCTCATAACGCCTGGATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTTTGCCAGCAGGGGAGG‑AAAATTA‑AG‑GCCGGGGA‑AGCGAAAGGGCTGATTTTTGTCAGCACGCTCCGCACTa > 2:948472/1‑150 (MQ=255) aaTCATGACTTATCTCCTCATAACGCCTGGATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTCGGCCAGCAGGGTAGT‑AAATTCA‑TG‑GCCGGGTA‑AGCGAATGGCCTGATTTTCGTCAGCACGCTCGGCACTAg < 2:1285083/151‑1 (MQ=255) aTCATGACTTATCTCCTCATAACGCCTGGATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTTGGGCCGCCGGGGAGT‑AAAATTA‑TT‑GCCGGGGA‑AGGGGATGGGCTGGTTTTTGTTAGGACGccccggcccagt > 1:1095888/1‑140 (MQ=255) tCATGACTTATCTCCTCATAACGCCTGGATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTTGGCCAGCAGGGGAGG‑AAATTTA‑TG‑GCCGGGGA‑AGCGAATGGCCTGATTTTTGTCAGCACGCCCGGCACTAGt > 2:707052/1‑150 (MQ=255) cATGACTTATCTCCTCATAACGCCTGGATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTTTGCCAACAGGGGAGG‑AAATTTA‑TGTGCCGGG‑A‑AGGGGATGGCCATGTTTTCTTTAGCACGGCCGGCACTCGTa > 1:1906895/1‑150 (MQ=255) aCTTATCTCCTCATAACGCCTGGATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTTTGCCCGCAGGGTAGT‑AAATTTA‑TT‑GCCGGGGA‑AGCGAATGGCCTGATTTTTTTCAGCACGCCCGGCCCTAGTAACGt > 1:1303881/1‑150 (MQ=255) cTTATCTCCTCATAACGCCTGGATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTTGGCCAGCCGGGGAGT‑AAATTTA‑TT‑GCCGGGGA‑AGCGGATGGCCTGCTTTTTGTCAGCACGCCCGGCACTAGTAACGTa > 1:269563/1‑150 (MQ=255) ttATCTCCTCATAACGCCTGGATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTTTGCCCGCCGGGGAGG‑AAAATCA‑TG‑GGCGGGGA‑AGCGGAAGGCCTGATTTTTGTTCGGACGCTCGGCACTTGTaaaggaa > 1:449367/1‑145 (MQ=255) aTCTCCTCATAACGCCTGGATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTTTGCCCGCAGGGGAGG‑AAATTCA‑TG‑GCCGGGGA‑AGCGAAAGGCCTGGTTTTTGTCAGCACCCTCCGCACTAGTAAAGTAAAcc > 1:1052556/1‑151 (MQ=255) aTCTCCTCATAACGCCTGGATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTTGGCCAGCAGGGGAGT‑AAATTCA‑TG‑GCCGGGGA‑AGCGAATGGCCTGCTTTTTGTCCGCACGCCCGGCACTAGTAACGTAATcc > 2:1843597/1‑151 (MQ=255) tctcCTCATAACGCCTGGATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTTCGCCAGCAGGGGAGT‑AAAATTA‑TG‑GCCGGGGG‑AGGGCATGGGCCGATTTTTGTCAGGACGCTCGGCACTAGTGAAGTAAttc > 1:94626/1‑148 (MQ=255) ctcctcATAACGCCTGGATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTTGGCCAGCAGGGGAGT‑AAAATCATTG‑GCCGGG‑G‑AGCGGAAGGCCCGATTTTTGTCAGCACGCTCGGCACTAGTAAAGGAATTCat > 1:669844/1‑151 (MQ=255) aaCGCCTGGATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTTGGCCCGCAGGGGAGT‑AAAATCA‑TT‑GCCGGGGA‑AGGGAAAGGCCTGGTTTTTGTCAGCACGCTCGGGACTAGGAAAGTAATCCATGATGAGtt > 1:1781887/1‑151 (MQ=255) aCGCCTGGATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTCGGCCAGCAGGGTAGT‑AAATTCA‑TG‑GCCGGGTA‑AGCGAATGGCCTGATTTTCGTCAGCACGCTCGGCACTAGTAACGTAATCCATGATGCGTTg < 1:2233720/151‑1 (MQ=255) cGCCTGGATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTTGGGCCGCAGGGGAGG‑AAAATTA‑TG‑GCCGGGGA‑AGCGAAAGGGCTGATTTTTGTCAGCACGCCCGGCACTAGTAAAGTAATCCATGATGTGTTgg > 2:243639/1‑150 (MQ=255) gCCTGGATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTTGGCCAGCAGGGGAGT‑AAATTTA‑TG‑GCCGGGGA‑AGCGAATGGCCTGATTTTTTTCAGCACGCTCGGCACTAGTAACGTAATTCATGATGCGTTGc > 2:2163054/1‑150 (MQ=255) gCCTGGATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTCGGCCAGCAGGGTAGT‑AGATTCA‑TG‑GCCGGGTA‑AGCGAATGGCCTGATTTTCGTCAGCACGCTCGGCACTAGTAACGTAATCCATGATGCGTTGCa < 1:2647448/151‑1 (MQ=255) gCCTGGATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTCGGCCAGCAGGGTAGT‑AAATTCA‑TG‑GCCGGGTA‑AGCGAATGGCCTGATTTTCGTCAGCACGCTCGGCACTAGTAACGTAATCCATGATGCGTTGCa < 2:1786866/151‑1 (MQ=255) gCCTGGATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTCGGCCAGCAGGGTAGT‑AAATTCA‑TG‑GCCGGGTA‑AGCGAATGGCCTGATTTTCGTCAGCACGCTCGGCACTAGTAACGTAATCCATGATGCGTTGCa < 1:276961/151‑1 (MQ=255) ccTGGATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTTGGCCAGCAGGGGAGT‑AAATTTA‑TT‑GACGGGGA‑AGGGGATGGGCTGGTTTTCGTTAGCCCGCCCGGCCCTAGTAACGTAATACATTATTCGTTGc > 1:2240910/1‑149 (MQ=255) tGGATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTTGGGCCGCAGGGGAGT‑AAATTTA‑TG‑GCCGGGGA‑AGCGAATGGGCTGATTTTTGTCAACACGCCCGGGACTAGTAACGGAATCCatgattggtttccgct > 2:2275625/1‑140 (MQ=255) ggATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTCGGCCAGCAGGGTAGT‑AAATTCA‑TG‑GCCGGGTA‑AGCGAATGGCCTGATTTTCGTCAGCACGCTCGGCACTAGTAACGTAATCCATGATGCGTTGCAGc < 1:1165438/149‑1 (MQ=255) ggATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTCGGCCAGCAGGGTAGT‑AAATTCA‑TG‑GCCGGGTA‑AGCGAATGGCCTGATTTTCGTCAGCACGCTCGGCACTAGTAACGTAATCCATGATGCGTTGCAGCt < 2:94626/150‑1 (MQ=255) ggATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTCGGCCAGCAGGGTAGT‑AAATTCA‑TG‑GCCGGGTA‑AGCGAATGGCCTGATTTTCGTCAGCACGCTCGGCACTAGTAACGTAATCCATGATGCGTTGCAGCt < 2:269562/150‑1 (MQ=255) gATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTTTGGCAGCAGGGGAGG‑AAAATTA‑TT‑GCCGGGTG‑AAGGAAAGGGCTGATTTTTTTTAGCACGCCCGGCACTATTAAAGGAAAACATAATGCGTTTCCGCttt > 1:2567698/1‑150 (MQ=255) gATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTTGGCCCGCCGGGTAGT‑AAATTCT‑TG‑GCCGGGGA‑AGAGGATGGCCCGCTTTTCGTTAGCACGCTCGGCCCCAGTAACGTAAACCAATATGCGTTTCAGCTTg > 1:147118/1‑151 (MQ=255) gATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTCGGCCAGCAGGGTAGT‑AAATTCA‑TG‑GCCGGGTA‑AGCGAATGGCCTGATTTTCGTCAGCACGCTCGGCACTAGTAACGTAATCCATGATGCGTTGCAGCTTg < 1:999905/151‑1 (MQ=255) aTTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTTGGGCAGCAGGGGAGT‑AAATTTA‑TG‑GGCGGGGG‑AGAGAAAGGCCTGGTTTTTGTCAGCACCCCCGGCACCAGTAAAGTAATCCATGATGCGTTGCCGCtttg > 2:1579580/1‑149 (MQ=255) aTTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTCGGCCAGCAGGGTAGT‑AAATTCA‑TG‑GCCGGGTA‑AGCGAATGGCCTGATTTTCGTCAGCACGCTCGGCACTAGTAACGTAATCCATGATGCGTTGCAGCTTgg < 1:1137042/151‑1 (MQ=255) tttGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTCGGCCAGCAGGGTAGT‑AAATTCA‑TG‑GCCGGGTA‑AGCGAATGGCCTGATTTTCGTCAGCACGCTCGGCACTAGTAACGTAATCCATGATGCGTTGCAGCTTGGc < 1:948471/150‑1 (MQ=255) cccACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTCGGCCAGCAGGGTAGT‑AAATTCA‑TG‑GCCGGGTA‑AGCGAATGGCCTGATTTTCGTCAGCACGCTCGGCACTAGTAACGTAATCCATGATGCGTTGCAGCTTGGCATcgcg < 2:1497113/151‑1 (MQ=255) cacaCGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTTTGCCAGCAGGGGAGT‑AAAATTA‑TG‑GGCGGGGA‑AGCGGAAGGGCTTATTTTTGTTAGCACGCCCGGGACCAATAAAGTAATACATTATGGGGTGCAGCCTGGGCTCGCggg > 1:1797509/1‑151 (MQ=255) cacaCGCTGTCATCAACAGTGATGCCGTTACGGCGGGTTTTGGGCAAAAGGGGAGT‑AAATTCA‑TA‑GCCGGGGATGGCGAAT‑GCCTGGTTTTTTTCCGCACCCTCGGGACTCAGAAAGGAAACCATCATGCGTTGCacgcctggaatccggg > 1:1983192/1‑136 (MQ=255) acacGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTCGGCCAGCAGGGTAGT‑AAATTCA‑TG‑GCCGGGTA‑AGCGAATGGCCTGATTTTCGTCAGCACGCTCGGCACTAGTAACGTAATCCATGATGCGTTGCAGCTTGGCATCGCGGGt < 1:617975/151‑1 (MQ=255) cacGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTCGGCCAGCAGGGTAGT‑AAATTCA‑TG‑GCCGGGTA‑AGCGAATGGCCTGATTTTCGTCAGCACGCTCGGCACTAGTAACGTAATCCATGATGCGTTGCAGCTTGGCATCGCGGGTg < 2:669845/151‑1 (MQ=255) tcatcaACAGTGATGCCGTTACGGCGGTTTTTGGGCCGCAGGGGAGT‑AAATTCA‑TG‑GCCGGGGA‑AGCGAATGGGCTGATTTTTTTCAGGACGCTCGGCACTAGGAAAGGAAAACATGATGCGTTTCAGCTTGGCATCGCGgggggggacgg > 1:93770/1‑146 (MQ=255) tcatcaACAGTGATGCCGTTACGGCGGTTTTCGGCCAGCAGGGGAGT‑AAATTCA‑TG‑GCCGGGTA‑AGCGAATGGGCTGATTTTCCTCAGCACCCTCCGCACTAGTAACATAATCCATGATGCGTTGCAGCTTGGCATCGCGGGGGGGGCCGt > 2:312875/1‑151 (MQ=255) catcaACAGTGATGCCGTTACGGCGGTTTTCGGCCAGCAGGGGAGT‑AAATTTA‑TG‑GCCGGGGA‑AGCGAAAGGGCTGATTTTTGTCAGCACCCTCGGCACCAGTAAAGTAATCCATGATGCGTTGCCGCTTGGCATCGCGGGGGGGGCCggc > 1:832596/1‑149 (MQ=255) atcaACAGTGATGCCGTTACGGCGGTTTTCGGCCAGCAGGGTAGT‑AAATTCA‑TG‑GCCGGGTA‑AGCGAATGGCCTGATTTTCGTCAGCACGCTCGGCACTAGTAACGTAATCCATGATGCGTTGCAGCTTGGCATCGCGGGTGGGACCGTCg < 2:89119/151‑1 (MQ=255) aaCAGTGATGCCGTTACGGCGGTTTTCGGGCAGCCGGGGAGTAAAATTAA‑TG‑GCCGGG‑A‑AGCGAATGGGCTGGTTTTTGTCAGCACCCTCCGCACTAGTAACGTAAACCATGATGCGTTTCAGCTTGGCATCGCGGGGGGGGCCGCCGAt > 1:2151369/1‑150 (MQ=255) aGTGATGCCGTTACGGCGGTTTTCGGCCAGCAGGGTAGT‑AAATTCA‑TG‑GCCGGGTA‑AGCGAATGGCCTGATTTTCGTCAGCACGCTCGGCACTAGTAACGTAATCCATGATGCGTTGCAGCTTGGCATCGCGGGTGGGACCGTCGATAAGc < 1:1596800/151‑1 (MQ=255) gTGATGCCGTTACGGCGGTTTTTGGCCAGCAGGGGAGG‑AAAATTA‑TT‑GGCGGGGA‑AGGGGATGGGCTGATTTTTGTCAGCAACCGCGGCACTAGTAAAGGAAATCATGATGGGTTTCAGCTTGGCATCGCGGGGGGGGACGGCGATaaagt > 1:844784/1‑148 (MQ=255) aTGCCGTTACGGCGGTTTTCGGCCAGCAGGGTAGT‑AAATTCA‑TG‑GCCGGGTA‑AGCGAATGGCCTGATTTTCGTCAGCACGCTCGGCACTAGTAACGTAATCCATGATGCGTTGCAGCTTGGCATCGCGGGTGGGACCGTCGATAAGCTTGt < 1:2163046/151‑1 (MQ=255) gCCGTTACGGCGGTTTTCGGCCAGCAGGGTAGT‑AAATTCA‑TG‑GCCGGGTA‑AGCGAATGGCCTGATTTTCGTCAGCACGCTCGGCACTAGTAACGTAATCCATGATGCGTTGCAGCTTGGCATCGCGGGTGGGACCGTCGATAAGCTTGTcc < 1:707051/151‑1 (MQ=255) gTTACGGCGGTTTTCGGCCAGCAGGGTAGT‑AAATTCA‑TG‑GCCGGGTA‑AGCGAATGGCCTGATTTTCGTCAGCACGCTCGGCACTAGTAACGTAATCCATGATGCGTTGCAGCTTGGCATCGCGGGTGGGACCGTCGATAAGCTTGTCCACt < 1:243640/151‑1 (MQ=255) cggcggTTTTCGGCCAGCAGGGTAGT‑AAATTCA‑TG‑GCCGGGTA‑AGCGAATGGCCTGATTTTCGTCAGCACGCTCGGCACTAGTAACGTAATCCATGATGCGTTGCAGCTTGGCATCGCGGGTGGGACCGTCGATAAGCTTGTCCACTTCa > 1:2387058/1‑150 (MQ=255) ggcggTTTTCGGCCAGCAGGGTAGT‑AAATTCA‑TG‑GCCGGGTA‑AGCGAATGGCCTGATTTTCGTCAGCACGCTCGGCACTAGTAACGTAATCCATGATGCGTTGCAGCTTGGCATCGCGGGTGGGACCGTCGATAAGCTTGTCCACTTCAAt < 1:1061980/151‑1 (MQ=255) ggcggTTTTCGGCCAGCAGGGTAGT‑AAATTCA‑TG‑GCCGGGTA‑AGCGAATGGCCTGATTTTCGTCAGCACGCTCGGCACTAGTAACGTAATCCATGATGCGTTGCAGCTTGGCATCGCGGGTGGGACCGTCGATAAGCTTGTCCACTTCAAt < 1:1579575/151‑1 (MQ=255) ggcggTTTTCGGCCAGCAGGGTAGT‑AAATTCA‑TG‑GCCGGGTA‑AGCGAATGGCCTGATTTTCGTCAGCACGCTCGGCACTAGTAACGTAATCCATGATGCGTTGCAGCTTGGCATCGCGGGTGGGACCGTCGATAAGCTTGTCCACTTCAAt > 1:2203251/1‑151 (MQ=255) ggcggTTTTCGGCCAGCAGGGTAGT‑AAATTCA‑TG‑GCCGGGTA‑AGCGAATGGCCTGATTTTCGTCAGCACGCTCGGCACTAGTAACGTAATCCATGATGCGTTGCAGCTTGGCATCGCGGGTGGGACCGTCGATAAGCTTGTCCACTTCAAt > 1:1270123/1‑151 (MQ=255) ggcggTTTTCGGCCAGCAGGGTAGT‑AAATTCA‑CG‑GCCGGGCA‑AACGGATGGCCTGATTTTCGTCAGCACGCTCGGCACTCGTAACGTAATCCATGATGCGTTGCAGCTTGGCATCGCGGGTGGGCCCGTCGATAAGCTTGTCCACTTCAAt > 1:2005092/1‑151 (MQ=255) gcggTTTTCGGCCAGCAGGGTAGT‑AAATTCA‑TG‑GCCGGGTA‑AGCGAATGGCCTGATTTTCGTCAGCACGCTCGGCACTAGTAACGTAATCCATGATGCGTTGCAGCTTGGCATCGCGGGTGGGACCGTCGATAAGCTTGTCCACTTc > 2:1108286/1‑147 (MQ=255) gcggTTTTCGGCCAGCAGGGTAGT‑AAATTCA‑TG‑GCCGGGTA‑AGCGAATGGCCTGATTTTCGTCAGCACGCTCGGCACTAGTAACGTAATCCATGATGCGTTGCAGCTTGGCATCGCGGGTGGGACCGTCGATAAGCTTGTCCACTTc < 1:1108285/147‑1 (MQ=255) gcggTTTTCGGCCAGCAGGGTAGT‑AAATTCA‑TG‑GCCGGGTA‑AGCGAATGGCCTGATTTTCGTCAGCACGCTCGGCACTAGTAACGTAATCCATGATGCGTTGCAGCTTGGCATCGCGGGTGGGACCGTCGATAAGCTTGTCCACTTCAATg < 2:2387068/151‑1 (MQ=255) gcggTTTTCGGCCAGCAGGGTAGT‑AAATTCA‑TG‑GCCGGGTA‑AGCGAATGGCCTGATTTTCGTCAGCACGCTCGGCACTAGTAACGTAATCCATGATGCGTTGCAGCTTGGCATCGCGGGTGGGACCGTCGATAAGCTTGTCCACTTCAATg < 1:2275616/151‑1 (MQ=255) gcggTTTTCGGCCAGCAGGGTAGT‑AAATTCA‑TG‑GCCGGGTA‑AGCGAATGGCCTGATTTTCGTCAGCACGCTCGGCACTAGTAACGTAATCCATGATGCGTTGCAGCTTGGCATCGCGGGTGGGACCGTCGATAAGCTTGTCCACTTCAATg > 2:1843745/1‑151 (MQ=255) ggTTTTCGGCCAGCAGGGTAGT‑AAATTCA‑TG‑GCCGGGTA‑AGCGAATGGCCTGATTTTCGTCAGCACGCTCGGCACTAGTAACGTAATCCATGATGCGTTGCAGCTTGGCATCGCGGGTGGGACCGTCGATAAGCTTGTCCACTTCAATGGc > 2:1223292/1‑151 (MQ=255) ggTTTTCGGCCAGCAGGGTAGT‑AAATTCA‑TG‑GCCGGGTA‑AGCGAATGGCCTGATTTTCGTCAGCACGCTCGGCACTAGTAACGTAATCCATGATGCGTTGCAGCTTGGCATCGCGGGTGGGACCGTCGATAAGCTTGTCCACTTCAATGGc < 2:1797514/151‑1 (MQ=255) tttCGGCCAGCAGGGTAGT‑AAATTCA‑TG‑GCCGGGTA‑AGCGAATGGCCTGATTTTCGTCAGCACGCTCGGCACTAGTAACGTAATCCATGATGCGTTGCAGCTTGGCATCGCGGGTGGGACCGTCGATAAGCTTGTCCACTTCAATGGCAAt > 2:349047/1‑151 (MQ=255) tCGGCCAGCAGGGTAGT‑AAATTCA‑TG‑GCCGGGTA‑AGCGAATGGCCTGATTTTCGTCAGCACGCTCGGCACTAGTAACGTAATCCATGATGCGTTGCAGCTTGGCATCGCGGGTGGGACCGTCGATAAGCTTGTCCACTTCAATGGCAATa > 1:1019893/1‑150 (MQ=255) tCGGCCAGCAGGGTAGT‑AAATTCA‑TG‑GCCGGGTA‑AGCGAATGGCCTGATTTTCGTCAGCACGCTCGGCACTAGTAACGTAATCCATGATGCGTTGCAGCTTGGCATCGCGGGTGGGACCGTCGATAAGCTTGTCCACTTCAATGGCAATa < 2:1516836/150‑1 (MQ=255) ggCCAGCAGGGTAGT‑AAATTCA‑TG‑GCCGGGTA‑AGCGAATGGCCTGATTTTCGTCAGCACGCTCGGCACTAGTAACGTAATCCATGATGCGTTGCAGCTTGGCATCGCGGGTGGGACCGTCGATAAGCTTGTCCACTTCAATGGCAATaaaa < 1:2308261/151‑1 (MQ=255) gCCAGCAGGGTAGT‑AAATTCA‑TG‑GCCGGGTA‑AGCGAATGGCCTGATTTTCGTCAGCACGCTCGGCACTAGTAACGTAATCCATGATGCGTTGCAGCTTGGCATCGCGGGTGGGACCGTCGATAAGCTTGTCCACTTCAATGGCAATaaaaa < 2:1906900/151‑1 (MQ=255) agGGTAGT‑AAATTCA‑TG‑GCCGGGTA‑AGCGAATGGCCTGATTTTCGTCAGCACGCTCGGCACTAGTAACGTAATCCATGATGCGTTGCAGCTTGGCATCGCGGGTGGGACCGTCGATAAGCTTGTCCACTTCAATGGCAATAAAAATTtgtg > 1:1248868/1‑151 (MQ=255) gggTAGT‑AAATTCA‑TG‑GCCGGGTA‑AGCGAATGGCCTGATTTTCGTCAGCACGCTCGGCACTAGTAACGTAATCCATGATGCGTTGCAGCTTGGCATCGCGGGTGGGACCGTCGATAAGCTTGTCCACTTCAATGGCAATAAAAATTtgtg > 2:354443/1‑150 (MQ=255) gtagt‑aAATTCA‑TG‑GCCGGGTA‑AGCGAATGGCCTGATTTTCGTCAGCACGCTCGGCACTAGTAACGTAATCCATGATGCGTTGCAGCTTGGCATCGCGGGTGGGACCGTCGATAAGCTTGTCCACTTCAATGGCa > 2:2535621/1‑135 (MQ=255) gtagt‑aAATTCA‑TG‑GCCGGGTA‑AGCGAATGGCCTGATTTTCGTCAGCACGCTCGGCACTAGTAACGTAATCCATGATGCGTTGCAGCTTGGCATCGCGGGTGGGACCGTCGATAAGCTTGTCCACTTCAATGGCa < 1:2535608/135‑1 (MQ=255) gtagt‑aAATTCA‑TG‑GCCGGGTA‑AGCGAATGGCCTGATTTTCGTCAGCACGCTCGGCACTAGTAACGTAATCCATGATGCGTTGCAGCTTGGCATCGCGGGTGGGACCGTCGATAAGCTTGTCCACTTCAATGGCAATAAAAATTTGTGaa > 1:2090866/1‑150 (MQ=255) | AGCGCCTTTTCAATGGCGGCGGGCAAACGGCACGGATTGGGCTGCGCGATATGTCCAAAAATCATGACTTATCTCCTCATAACGCCTGGATTTTGGCCCACACGCTGTCATCAACAGTGATGCCGTTACGGCGGTTTTCGGCCAGCAGGGTAGT‑AAATTCA‑TG‑GCCGGGTA‑AGCGAATGGCCTGATTTTCGTCAGCACGCTCGGCACTAGTAACGTAATCCATGATGCGTTGCAGCTTGGCATCGCGGGTGGGACCGTCGATAAGCTTGTCCACTTCAATGGCAATAAAAATTTGTGAA > DH1/139956‑140254 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |