Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | DH1 | 2,726,166 | 0 | A | C | 44.4% | 181.4 / 87.1 | 127 | Y92D (TAC→GAC) | pabC | 4‑amino‑4‑deoxychorismate lyase |
Reads supporting (aligned to +/- strand): ref base A (68/2); new base C (0/56); total (68/59) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 5.93e-34 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 131 total aligned reads displayed.
GATGTTTAATACCTGCAAGATGAGGATTGCGCCCCAGCCGCACCGGGCTTAGCGCCAACGTAATCCCCTCGTTACGCAAACGGTC‑GTAATGTGCAGGATAAGCCGTAA‑CGGAGAGAATCCGCGTT‑GCC‑GGTCCGCTGTTCAA‑TGTGCTGTACCCTCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCAGCGTTTTCATCTCTTGTTCAAGCTGAGGCCAGAAGTCACAGGAAATCATCAACCGCTGACAAGCATCCTGTAGTCGCTGGATATG > DH1/2726016‑2726316 | gaTGTTTAATACCTGCAAGATGAGGATTGCGCCCCAGCCGCACCGGGCTTAGCGCCAACGTAATCCCCTCGTTACGCAAACGGTC‑GTAATGTGCAGGATAAGCCGTAA‑CGGAGAGAATCCGCGTT‑GCC‑GGTCCGCTGTTCAA‑TGTGCTGTa < 1:1033285/151‑1 (MQ=255) aTGTTTAATACCTGCAAGATGAGGATTGCGCCCCAGCCGCACCGGGCTTAGCGCCAACGTAATCCCCTCGTTACGCAAACGGTC‑GTAATGTGCAGGATAAGCCGTAA‑CGGAGAGAATCCGCGTT‑GCC‑GGTCCGCTGTTCAA‑TGTGCTGTAc < 2:1710023/151‑1 (MQ=255) tAATACCTGCAAGATGAGGATTGCGCCCCAGCCGCACCGGGCTTAGCGCCAACGTAATCCCCTCGTTACGCAAACGGTC‑GTAATGTGCAGGATAAGCCGTAA‑CGGAGAGAATCCGCGTT‑GCC‑GGTCCGCTGTTCAA‑TGTGCTGTACCCTc < 1:1241471/150‑1 (MQ=255) aCCTGCAAGATGAGGATTGCGCCCCAGCCGCACCGGGCTTAGCGCCAACGTAATCCCCTCGTTACGCAAACGGTC‑GTAATGTGCAGGATAAGCCGTAA‑CGGAGAGAATCCGCGTT‑GCC‑GGTCCGCTGTTCAA‑TGTGCTGTACCCTcgcccg > 1:655257/1‑151 (MQ=255) gCAAGATGAGGATTGCGCCCCAGCCGCACCGGGCTTAGCGCCAACGTAATCCCCTCGTTACGCAAACGGTC‑GTAATGTGCAGGATAAGCCGTAA‑CGGAGAGAATCCGCGTT‑GCC‑GGTCCGCTGTTCAA‑TGTGCTGTACCCTCGCCCGCCAc > 2:468080/1‑151 (MQ=255) aaGATGAGGATTGCGCCCCAGCCGCACCGGGCTTAGCGCCAACGTAATCCCCTCGTTACGCAAACGGTC‑GTAATGTGCAGGATAAGCCGTAA‑CGGAGAGAATCCGCGTT‑GCC‑GGTCCGCTGTTCAA‑TGTGCTGTACCCTCGCCCGCCACt > 1:571179/1‑150 (MQ=255) aaGATGAGGATTGCGCCCCAGCCGCACCGGGCTTAGCGCCAACGTAATCCCCTCGTTACGCAAACGGTC‑GTAATGTGCAGGATAAGCCGTAA‑CGGAGAGAATCCGCGTT‑GCC‑GGTCCGCTGTTCAA‑TGTGCTGTACCCTCGCCCGCCACt > 1:2299602/1‑150 (MQ=255) aaGATGAGGATTGCGCCCCAGCCGCACCGGGCTTAGCGCCAACGTAATCCCCTCGTTACGCAAACGGTC‑GTAATGTGCAGGATAAGCCGTAA‑CGGAGAGAATCCGCGTT‑GCC‑GGTCCGCTGTTCAA‑TGTGCTGTACCCTCGCCCGCCACt > 2:492096/1‑150 (MQ=255) gATGAGGATTGCGCCCCAGCCGCACCGGGCTTAGCGCCAACGTAATCCCCTCGTTACGCAAACGGTC‑GTAATGTGCAGGATAAGCCGTAA‑CGGAGAGAATCCGCGTT‑GCC‑GGTCCGCTGTTCAA‑TGTGCTGTACCCTCGCCCGCCACTAcc > 2:1158949/1‑151 (MQ=255) tGAGGATTGCGCCCCAGCCGCACCGGGCTTAGCGCCAACGTAATCCCCTCGTTACGCAAACGGTC‑GTAATGTGCAGGATAAGCCGTAA‑CGGAGAGAATCCGCGTT‑GCC‑GGTCCGCTGTTCAA‑TGTGCTGTACCCTCGCCCGCCACTACcgc > 1:2523941/1‑151 (MQ=255) tGAGGATTGCGCCCCAGCCGCACCGGGCTTAGCGCCAACGTAATCCCCTCGTTACGCAAACGGTC‑GTAATGTGCAGGATAAGCCGTAA‑CGGAGAGAATCCGCGTT‑GCC‑GGTCCGCTGTTCAA‑TGTGCTGTACCCTCGCCCGCCACTACcg > 2:205846/1‑150 (MQ=255) gttggccccccACCCGCCCCGGGTTGAGCCCAAACATACCCCCCTCTTTACAAAAACGGTG‑GTAATGGGGAGGAAAAGCCGAAA‑GGGAGAAAACCCGTGTT‑GCC‑GGTCCGTTGTTAAA‑GGTGCGGTCCCCTCGCCCGCCACTACCGCGACt < 2:2619212/144‑1 (MQ=255) tGCGCCCCAGCCGCACCGGGCTTAGCGCCAACGTAATCCCCTCGTTACGCAAACGGTC‑GTAATGTGCAGGATAAGCCGTAA‑CGGAGAGAATCCGCGTT‑GCC‑GGTCCGCTGTTCAA‑TGTGCTGTACCCTCGCCCGCCACTACCGCGACTGAt > 2:1616434/1‑151 (MQ=255) tGCCCCCCAGCCGCACCGGGTTAACCCCTAAGTTAACCCCCTCTTTCCGAAAACGTTG‑GAAATGTGAAGAATAAGCCGAAA‑GGGAGAAAACCCGCTTG‑CCC‑GTTCCGTTGTTAAA‑TGGCCTGTCCCCTCGCCCGCCACTACCGCGACTGa < 1:574166/150‑1 (MQ=255) cgccccccGGCCGCACGGGGTTTAGCGCCACCGTACCCCCCTCGTTACGAAAACGGTC‑GTAATGTGCAGAAAAACCCGTAA‑GGGAGAGAA‑CCGGGTTGGCG‑GGCCCGTTGTTAAA‑TGTGCTGTCCCCCCGCCCGCCACTACCGCGACTGa < 1:1771382/146‑1 (MQ=255) gcCCCAGCCGCACCGGGCTTAGCGCCAACGTAATCCCCTCGTTACGCAAACGGTC‑GTAATGTGCAGGATAAGCCGTAA‑TGGAGAGAATCCGCGTT‑GCC‑GGTCCGCTGTTCAA‑TGTGCTGTACCCTCGCCCGCCACTACCGCGACTGATCAc > 1:2633649/1‑151 (MQ=255) ccccAGCCGCCCGGGGCTTGGCGCAAACGAAACCCCCTCGTTACGAAACGGGTG‑GTATGGTGAAGAAAAAGCCGAAA‑GGGAGAGAACCCGCGTT‑GCC‑GTTCCGTTTTTAAA‑TGTGCTTCCCCCCCGCCCGCCACTACCGCGACTGATCACg < 2:1625666/151‑1 (MQ=255) ccccAGCCGCACCGGGCTTAGCGCCAACGTAATCCCCTCGTTACGCAAACGGTC‑GTAATGTGCAGGATAAGCCGTAA‑CGGAGAGAATCCGCGTT‑GCC‑GGTCCGCTGTTCAA‑TGTGCTGTACCCTCGCCCGCCACTACCGCGACTGATCACg > 1:520276/1‑151 (MQ=255) cgatcccGCCCGGGGCTTAGCCCCAACTTAACCCCCTCGTTCCGAAAACGGTC‑TTAATGTGAGGGAAAAGCCGTAA‑GGGAGAAAACCCGCTTT‑GCC‑GGTCCGCTGTTAAA‑TGTGCTGTCCCCTCGCCCGCCACTACCGCGACTGATCACGa < 2:1672328/146‑1 (MQ=255) cccAGCCGCCCGGGGCTTAGCGCAAACGTAACCCCCTCGTTCCGCAAACGGTC‑GTAATGTGCAGGATAAGCCGAAA‑CGGAGAGAACCCGCGTT‑GCC‑GGTCCGCTTTTCAA‑TGTGCTGCCCCCCCGCCCGCCACTACCGCGACTGATCACGa < 2:2147107/151‑1 (MQ=255) cccAGCCGCCCCGGGCTGGGCGCAAACGTAACCCCCTCTTTCCCAAACCGGTC‑GTAATGGGCAGGATAAGCCGAAA‑CGGAGAGACCCCGCGTT‑GCC‑GCCCCGTTTTTAAA‑TGGGCTGCCCCCCCGCCCGCCACTACCGCGACTGATCACGa < 2:50474/151‑1 (MQ=255) ccAGCCGCACCGGGCTTAGCGCCAACGTAATCCCCTCGTTACGCAAACGGTC‑GTAATGTGCAGGATAAGCCGTAA‑CGGAGAGAATCCGCGTT‑GCC‑GGTCCGCTGTTCAA‑TGTGCTGTACCCTCGCCCGCCACTACCGCGACTGATCACGAc > 2:1881094/1‑151 (MQ=255) aGCCGCACCGGGCTTAGCGCCAACGTAATCCCCTCGTTACGCAAACGGTC‑GTAATGTGCAGGATAAGCCGTAA‑CGGAGAGAATCCGCGTT‑GCC‑GGTCCGCTGTTCAA‑TGTGCTGTACCCTCGCCCGCCACTACCGCGACTGATCACGACtt > 1:1300704/1‑151 (MQ=255) gCACCGGGCTTAGCGCCAACGTAATCCCCTCGTTACGCAAACGGTC‑GTAATGTGCAGGATAAGCCGTAA‑CGGAGAGAATCCGCGTT‑GCC‑GGTCCGCTGTTCAA‑TGTGCTGTACCCTCGCCCGCCACTACCGCGACTGATCACGACTTTc > 2:2010537/1‑149 (MQ=255) ccccGGGTTTCGCGCCAACCTAACCCCCTGTTTCCAAAACCGGCG‑GAAAGGTCAAGGATAACCCGAAC‑GGGAAAAATTCCGCTTG‑GCG‑GGCCCGCTGTTCAG‑TGGTCTGCCCCCCCGCCCGCCACTACCGCGACTGATCACGACTTTCAGc < 2:655258/149‑1 (MQ=255) cACGGGTCTTAGCCCCAACGTAACCCCCTCTTTACCAAAGCGGTC‑GTAAGGTGCAGAATAAGCCGTAA‑GGGAGAGACCCCGCGTT‑GCC‑GGCCCGTTGTTAAT‑TGTGCTGTCCCCCCGCCCGCCACTACCGCGACTGATCACGACTTTCAGc < 2:1300706/151‑1 (MQ=255) aCCGGGCTTAGCGCCAACGTAATCCCCTCGTTACGCAAACGGTC‑GTAATGTGCAGGATAAGCCGTAA‑CGGAGAGAATCCGCGTT‑GCC‑GGTCCGCTGTTCAA‑TGTGCTGTACCCTCGCCCGCCACTACCGCGACTGATCACGACTTTCAGc > 1:1614624/1‑150 (MQ=255) ggCTTGGCCCCACCTTACCCCCCTCGTTCCGCAACCGGTC‑GTAATGTGCAGAAAAACCCGTAA‑CGGAGAGACCCCGCGTT‑GCC‑GGTCCGCTTTTCAT‑TGTGCTGCCCCCCCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACAcc < 2:520276/151‑1 (MQ=255) ggCTTAGCGCCAACGTAATCCCCTCGTTACGCAAACGGTC‑GTAATGTGCAGGATAAGCCGTAA‑CGGAGAGAATCCGCGTT‑GCC‑GGTCCGCTGTTCAA‑TGTGCTGTACCCTCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACAcc > 1:652061/1‑151 (MQ=255) ttAGCGCCAACGTAATCCCCTCGTTACGCAAACGGTC‑GTAATGTGCAGGATAAGCCGTAA‑CGGAGAGAATCCGCGTT‑GCC‑GGTCCGCTGTTCAA‑TGTGCTGTACCCTCGCCCGCCACTACCGCGACTGATCACGACttt > 2:1973178/1‑139 (MQ=255) ttAGCGCCAACGTAATCCCCTCGTTACGCAAACGGTC‑GTAATGTGCAGGATAAGCCGTAA‑CGGAGAGAATCCGCGTT‑GCC‑GGTCCGCTGTTCAA‑TGTGCTGTACCCTCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCAtt > 2:247775/1‑151 (MQ=255) aagcccaaaCTTAACCCCCTCTTTACAAAAACGGTC‑GTAATGTGAAGGAAAAGCCGTAA‑GGGAGAGAACCCGCGTT‑GCC‑GGCCCGTTGTTAAT‑TGTGCTGTCCCCTCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCAttt < 2:2644404/144‑1 (MQ=255) agcccaaaCTTAACCCCCTCGTTACGAAACCGGTG‑TTAATGTGCAGAAAAAGCCGAAA‑CGGAGAGAACCCGCGTT‑GCC‑GGTCCGCTTTTAAA‑TGTGCTGTCCCCTCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCAtttt < 1:1863654/145‑1 (MQ=255) cgcCAACTTACCCCCCTCTTTACGAAAACGTTC‑GTAATGTGCAGAATAAGCCGTAA‑CGGAGAGAACCCGCGTT‑GCC‑GGTCCGTTTTTCAA‑TGTGCTGTCCCCTCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGc < 2:571180/151‑1 (MQ=255) gcCAACTAAACCCCCTCGTTCCGAAACCGGTC‑GTATTGGCAAGGTAAAGCCGTAA‑GGGAAAGACCCCGCTTC‑GCC‑GCTCCGCGGTTAAA‑GGTCCTTTCCCCCCCCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCt < 1:2355739/151‑1 (MQ=255) cAACGTAATCCCCTCGTTACGCAAACGGTC‑GTAATGTGCAGGATAAGCCGTAA‑CGGAGAGAATCCGCGTT‑GCC‑GGTCCGCTGTTCAA‑TGTGCTGTACCCTCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGt > 1:2200736/1‑151 (MQ=255) aaCTTAACCCCCTCGTTACGCAACCGGTC‑GAATTGTGAAGAAAAAGCCGAAA‑GGGAGAAACCCCGCTTT‑GCC‑GTTCCGTTTTTAAT‑TGTGCTTTCCCCCCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGtt < 2:841653/151‑1 (MQ=255) aCGTAACCCCCTCGTTACGCAAACGGTC‑GTAATGTGCAGGAAAAGCCGAAA‑CGGAGAGAACCCGCGTC‑GCC‑GGTCCGTTTTTCAA‑TGTGCTGTCCCCTCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTc < 1:204358/151‑1 (MQ=255) caaaacccccTGGTTACGCAAACGGTC‑GTAATGCGCGGTAAACACCGAAA‑GGAAAAGATCCCGCTTG‑ACC‑GTTCGGCTTTCTAT‑TGTGCGCCCCCCCCGTCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTct < 1:267777/145‑1 (MQ=255) ccccccTCTTTACCAAAGCGGTC‑GTAATGGGCAGGAAAAGCGGAAA‑GGGAGAGAACCCGCTTT‑GCG‑GGCCCGCTTTTAAA‑TGTGCTTTCCCCCCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTctgctg < 2:1813538/149‑1 (MQ=255) tCCCCTCGTTACGCAAACGGTC‑GTAATGTGCAGGATAAGCCGTAA‑CGGAGAGAATCCGCGTT‑GCC‑GGTCCGCTGTTCAA‑TGTGCTGTACCCTCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCtgctgc > 1:2284138/1‑151 (MQ=255) cccccTCGTT‑CCCAAACGGTCTTTATTGTGCGGAATAGCCCGAAA‑CGGAGAAACCCCGCTTT‑GCC‑GGCCCGTTTTTCAA‑GGTCCGCTCCCCGCCCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTctgctg < 2:2059524/149‑1 (MQ=255) ccccTCGTTACGCAAACGGTC‑GTAATGTGCAGGATAAGCCGTAA‑CGGAGAGAATCCGCGTT‑GCC‑GGTCCGCTGTTCAA‑TGTGCTGTACCCTCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGcc > 1:1657589/1‑151 (MQ=255) ccccTCGTTACGCAAACGGTC‑GTAATGTGCAGGATAAGCCGTAA‑CGGAGAGAATCCGCGTT‑GCC‑GGTCCGCTGTTCAA‑TGTGCTGTACCCTCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGcc > 1:1071541/1‑151 (MQ=255) ccTCGTTACGCAAACGGTC‑GTAATGTGCAGGATAAGCCGTAA‑CGGAGAGAATCCGCGTT‑GCC‑GGTCCGCTGTTCAA‑TGTGCTGTACCCTCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGcc > 2:1655504/1‑149 (MQ=255) tCGTTACGCAAACGGTC‑GTAATGTGCAGGATAAGCCGTAA‑CGGAGAGAATCCGCGTT‑GCC‑GGTCCGCTGTTCAA‑TGTGCTGTACCCTCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCAGCg > 2:1024808/1‑151 (MQ=255) cGTTACGCAAACGGTC‑GTAATGTGCAGGATAAGCCGTAA‑CGGAGAGAATCCGCGTT‑GCC‑GGTCCGCTGTTCAA‑TGTGCTGTACCCTCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCAGCGt > 2:1421061/1‑151 (MQ=255) cGTTACGCAAACGGTC‑GTAATGTGCAGGATAAGCCGTAA‑CGGAGAGAATCCGCGTT‑GCC‑GGTCCGCTGTTCAA‑TGTGCTGTACCCTCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCAGCGt > 1:1690080/1‑151 (MQ=255) ttccgaaaaCGGTC‑GTAATGTGAAGAAAAAGCCGTAA‑GGGAGAAAACCCGCGTT‑GCC‑GGCCCGCTTTTAAA‑TGTGCTGTCCCCCCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCAGCGt < 2:267809/143‑1 (MQ=255) aCGCAAACGGTC‑GTAATGTGCAGGATAAGCCGTAA‑CGGAGAGAATCCGCGTT‑GCC‑GGTCCGCTGTTCAA‑TGTGCTGTACCCTCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCAGCGTTTTc > 1:1859939/1‑151 (MQ=255) ggTC‑GTAATGTGCAGGATAAGCCGTAA‑CGGAGAGAATCCGCGTT‑GCC‑GGTCCGCTGTTCAA‑TGTGCTGTACCCTCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCAGCGTTTTCATCTCTTg > 2:66963/1‑151 (MQ=255) gTC‑GTAATGTGCAGGATAAGCCGTAA‑CGGAGAGAATCCGCGTT‑GCC‑GGTCCGCTGTTCAA‑TGTGCTGTACCCTCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCAGCGTTTTCATCTCtt > 1:634990/1‑149 (MQ=255) gTC‑GAAATGTGCAGGATAGGCCTAAG‑CGGAGAGAACCCGCGTG‑GCT‑GGCCCGCTTTTCAA‑TGTGCTGTCCCCCCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCAGCGTTTTCATCTCtt < 2:634991/149‑1 (MQ=255) c‑GTAATGTGCAGGATAAGCCGTAA‑CGGAGAGAATCCGCGTT‑GCC‑GGTCCGCTGTTCAA‑TGTGCTGTACCCTCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCAGCGTTTTCATCTCTTGTTc > 1:2143511/1‑151 (MQ=255) c‑GTAATGTGCAGGAAAAGCCGTAA‑CGGAGAGAACCCGCGTT‑GCC‑GGTCCGTTTTTCAA‑TGTGCTTTCCCCCCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCAGCGTTTTCATCTCTTGtt < 2:2633665/150‑1 (MQ=255) ggTAATGTCAAGAATAGGCCGAAG‑CGGAAAAACCCCGCGTC‑GCC‑GGCCCGTTGTTAAT‑GGTGCTCTCCCCCCCCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCAGCGTTTTCATCTCTTGTTc < 2:2200745/150‑1 (MQ=255) aggagtgtgCAGGATAA‑CCATAAGGGGAGACACCCCGCGTT‑GCC‑GCTCCTGTGTTCAT‑TGGTCTCCCCCCTCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCAGCGTTTTCATCTCTTGtt < 2:265215/145‑1 (MQ=255) gTAATGTGCAGGATAAGCCGTAA‑CGGAGAGAATCCGCGTT‑GCC‑GGTCCGCTGTTCAA‑TGTGCTGTACCCTCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCAg > 2:2624791/1‑132 (MQ=255) gTAATGTGCAGGATAAGCCGTAA‑CGGAGAGAATCCGCGTT‑GCC‑GGTCCGCTGTTCAA‑TGTGCTGTACCCTCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCAGCGTTTTCATCTCTTGTTc > 2:2202464/1‑150 (MQ=255) tgtgCAGGATAAGCCGTAA‑CGGAGAGAATCCGCGTT‑GCC‑GGTCCGCTGTTCAA‑TGTGCTGTACCCTCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCAGCGTTTTCATCTCTTg > 1:1789069/1‑143 (MQ=255) tgtgCAGGATAAGCCGTAA‑CGGAGAGAATCCGCGTT‑GCC‑GGTCCGCTGTTCAA‑TGTGCTGTACCCTCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCAGCGTTTTCATCTCTTGTTCAAGCt > 2:2370043/1‑151 (MQ=255) gtgCAGGATAAGCCGTAA‑CGGAGAGAATCCGCGTT‑GCC‑GGTCCGCTGTTCAA‑TGTGCTGTACCCTCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCAGCGTTTTCATCTCTTGTTCAAGCTg > 2:114617/1‑151 (MQ=255) cAGGATAAGCCGTAA‑CGGAGAGAATCCGCGTT‑GCC‑GGTCCGCTGTTCAA‑TGTGCTGTACCCTCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCAGCGTTTTc > 2:512974/1‑131 (MQ=255) aGGATAAGCCGTAA‑CGGAGAGAATCCGCGTT‑GCC‑GGTCCGCTGTTCAA‑TGTGCTGTACCCTCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCAGCGTTTTCATCTCTTGTTCAAGCTGAGGc > 1:1091445/1‑151 (MQ=255) aaaaGCCGTAC‑CGGAAAGAACCCGCGTT‑GCC‑GTTCCGTTTTTAAT‑TGTGCTGTCCCCCCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCAGCGTTTTCATCTCTTGTTCAAGCTGAGGCCAg < 2:1614629/149‑1 (MQ=255) aaGCCGTAA‑GGGAGAAAACCCTCTTT‑GCG‑GGTCCGCTGTTCAT‑TGTGCTGTCCCCCCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCAGCGTTTTCATCTCTTGTTCAAGCTGAGGCCAGaa < 2:1423845/151‑1 (MQ=255) aaGCCGTAA‑CGGAGAGAATCCGCGTT‑GCC‑GGTCCGCTGTTCAA‑TGTGCTGTACCCTCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCAGCGTTTTCATCTCTTGTTCAAGCTGAGGCCAGa > 1:1068376/1‑150 (MQ=255) gCCGTAA‑CGGAGAGAATCCGCGTT‑GCC‑GGTCCGCTGTTCAA‑TGTGCTGTACCCTCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCAGCGTTTTCATCTCTTGTTCAAGCTGAGGCCAGAAGt > 1:1906770/1‑151 (MQ=255) ccaaaagggAGAAAACCCGTGTT‑GCC‑GTCCCGTTTTTCAT‑TGTGCTGTCCCCCCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCAGCGTTTTCATCTCTTGTTCAAGCTGAGGCCAGAAGTc < 2:2252518/144‑1 (MQ=255) tAA‑CGGAGAGAATCCGCGTT‑GCC‑GGTCCGCTGTTCAA‑TGTGCTGTACCCTCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCAGCGTTTTCATCTCTTGTTCAAGCTGAGGCCAGAAGTcac > 2:1129618/1‑150 (MQ=255) tAA‑CGGAGAGAATCCGCGTT‑GCC‑GGTCCGCTGTTCAA‑TGTGCTGTACCCTCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCAGCGTTTTCATCTCTTGTTCAAGCTGAGGCCAGAAGTcac > 1:2425587/1‑150 (MQ=255) acgggAGAGACCCCGCGTG‑CCC‑GGCCCGCTGTCAAG‑TGTCCGGGCCCCCCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCAGCGTTTTCATCTCTTGTTCAAGCTGAGGCCAGAAGTCACAg < 1:247776/148‑1 (MQ=255) a‑CGGAGAAAACCCG‑TTT‑GCCGGGTCCGCTTTGAAT‑TGTGCTCCCCCCTCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCAGCGTTTTCATCTCTTGTTCAAGCTGAGGCCAGAAGTCACAgg < 1:114617/151‑1 (MQ=255) ggagaaaccccGCGTT‑GCC‑GGTCCGCTGTTCAA‑TGTGCTGTCCCCCCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCAGCGTTTTCATCTCTTGTTCAAGCTGAGGCCAGAAGTCACAGGaa < 2:2523953/142‑1 (MQ=255) agaACCCGGGTT‑GCC‑GGCCGGCTGTTAAA‑TGTGCTGTCCCCCCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCAGCGTTTTCATCTCTTGTTCAAGCTGAGGCCAGAAGTCACAGGAAatca < 2:1071542/151‑1 (MQ=255) gaATCCGCGTT‑GCC‑GGTCCGCTGTTCAA‑TGTGCTGTACCCTCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCAGCGTTTTCATCTCTTGTTCAAGCTGAGGCCAGAAGTCACAGGAAatcat > 2:1828731/1‑151 (MQ=255) aacccgtttcgCC‑GGCCCGTTTTTCAT‑TGTCCTCTCCCCTCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCAGCGTTTTCATCTCTTGTTCAAGCTGAGGCCAGAAGTCACAGGAAatcatc < 1:1421056/141‑1 (MQ=255) aTCCGCGTT‑GCC‑GGTCCGCTGTTCAA‑TGTGCTGTACCCTCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCAGCGTTTTCATCTCTTGTTCAAGCTGAGGcc > 1:1019355/1‑130 (MQ=255) aTCCGCGTT‑GCC‑GGTCCGCTGTTCAA‑TGTGCTGTACCCTCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCAGCGTTTTCATCTCTTGTTCAAGCTGAGGCCAGAAGTCACAGGAAatcatc > 2:194091/1‑150 (MQ=255) ccGCTTT‑CCG‑GGTCCGCT‑TTCAATTGTCTTGTCCCCCCCCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCAGCGTTTTCATCTCTTGTTCAAGCTGAGGCCAGAAGTCACAGGAAATCATCAAc < 1:66963/151‑1 (MQ=255) ccGCGTT‑GCC‑GGTCCGCTGTTCAA‑TGTGCTGTACCCTCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCAGCGTTTTCATCTCTTGTTCAAGCTGAGGCCAGAAGTCACAGGAAATCATCAAc > 2:267847/1‑151 (MQ=255) cgcgTT‑GCC‑GGTCCGCTGTTCAA‑TGTGCTGTACCCTCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCAGCGTTTTCATCTCTTGTTCAAGCTGAGGCCAGAAGTCACAGGAAATCATCAAcc > 2:1032834/1‑151 (MQ=255) cgcgtggcgtcgccGTTGTTTAT‑TTTGCTGTCCCCTCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCAGCGTTTTCATCTCTTGTTCAAGCTGAGGCCAGAAGTCACAGGAAATCATCAAcc < 1:1805100/139‑1 (MQ=255) tt‑GCC‑GGCCCGTTTTTCAA‑TGTGCTGTCCCCCCCCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCAGCGTTTTCATCTCTTGTTCAAGCTGAGGCCAGAAGTCACAGGAAATCATCAACCGc < 2:2425599/149‑1 (MQ=255) t‑GCC‑GGTCCGCTGTTCAA‑TGTGCTGTACCCTCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCAGCGTTTTCATCTCTTGTTCAAGCTGAGGCCAGAAGTCACAGGAAATCATCAACCGCTg > 1:2094113/1‑150 (MQ=255) gCC‑GGTCCGCTGTTCAA‑TGTGCTGTACCCTCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCAGCGTTTTCATCTCTTGTTCAAGCTGAGGCCAGAAGTCACAGGAAATCATCAACCGCTGAc > 1:2282111/1‑151 (MQ=255) c‑GGTCCGCTTTTAAA‑TGTGCTGTCCCCCCCCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCAGCGTTTTCATCTCTTGTTCAAGCTGAGGCCAGAAGTCACAGGAAATCATCAACCGCTGACaa < 2:2143519/151‑1 (MQ=255) gccccgtttttCAT‑TGTTCTGTCCCCTCCCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCAGCGTTTTCATCTCTTGTTCAAGCTGAGGCCAGAAGTCACAGGAAATCATCAACCGCTGACAAg < 1:2076126/142‑1 (MQ=255) gccccttGTTAAA‑TGTGCTTTCCCCTCCCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCAGCGTTTTCATCTCTTGTTCAAGCTGAGGCCAGAAGTCACAGGAAATCATCAACCGCTGACAAGc < 2:2094121/145‑1 (MQ=255) tCCGCTGTTCAA‑TGTGCTGTACCCTCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCAGCGTTTTCATCTCTTGTTCAAGCTGAGGCCAGAAGTCACAGGAAATCATCAACCGCTGACAAGc > 1:114286/1‑150 (MQ=255) ccgttttccAA‑TGTGCTGTCCCCCCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCAGCGTTTTCATCTCTTGTTCAAGCTGAGGCCAGAAGTCACAGGAAATCATCAACCGCTGACAAGCa < 1:2010529/142‑1 (MQ=255) tttgtaaaa‑TGTCCTGCCCCCTCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCAGCGTTTTCATCTCTTGTTCAAGCTGAGGCCAGAAGTCACAGGAAATCATCAACCGCTGACAAGCATc < 2:181197/143‑1 (MQ=255) tGTTCAA‑TGTGCTGTACCCTCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCAGCGTTTTCATCTCTTGTTCAAGCTGAGGCCAGAAGTCACAGGAAATCATCAACCGCTGACAAGCATCCTg > 1:2403572/1‑151 (MQ=255) ttCAA‑TGTGCTGTACCCTCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCTGCGTTTTCATCTCTTGTTCAAGCTGAGGCCAGAAGTCACAGGAAATCATCAACCGCTGACAAGCATCCTGt > 1:2600625/1‑150 (MQ=255) cAA‑TGTGCTGTACCCTCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCAGTGTTTTCATCTCTTGTTCAAGCTGAGGCCAGAAGTCACAGGAAATCATCAACCGCTGACAAGCATCCTGTAGt > 1:2648212/1‑151 (MQ=255) aa‑TGTCCTGCCCCCCCCCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCAGCGTTTTCATCTCTTGTTCAAGCTGAGGCCAGAAGTCACAGGAAATCATCAACCGCTGACAAGCATCCTGTAGTc < 1:1828726/151‑1 (MQ=255) gCTGTCCCCCCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCAGCGTTTTCATCTCTTGTTCAAGCTGAGGCCAGAAGTCACAGGAAATCATCAACCGCTGACAAGCATCCTGTAGTCGCTg < 2:1690085/150‑1 (MQ=255) aCCCTCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCAGCGTTTTCATCTCTTGTTCAAGCTGAGGCCAGAAGTCACAGGAAATCATCAACCGCTGACAAGCATCCTGTAGTCGCTGGATATg > 1:1605755/1‑151 (MQ=255) aCCCTCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCAGCGTTTTCATCTCTTGTTCAAGCTGAGGCCAGAAGTCACAGGAAATCATCAACCGCTGACAAGCATCCTGTAGTCGCTGGATATg > 2:2431350/1‑151 (MQ=255) aCCCTCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCAGCGTTTTCATCTCTTGTTCAAGCTGAGGCCAGAAGTCACAGGAAATCATCAACCGCTGACAAGCATCCTGTAGTCGCTGGATATg > 2:2176799/1‑151 (MQ=255) | GATGTTTAATACCTGCAAGATGAGGATTGCGCCCCAGCCGCACCGGGCTTAGCGCCAACGTAATCCCCTCGTTACGCAAACGGTC‑GTAATGTGCAGGATAAGCCGTAA‑CGGAGAGAATCCGCGTT‑GCC‑GGTCCGCTGTTCAA‑TGTGCTGTACCCTCGCCCGCCACTACCGCGACTGATCACGACTTTCAGCACACCATTTTGCTGTTCTGCTGCCAGCGTTTTCATCTCTTGTTCAAGCTGAGGCCAGAAGTCACAGGAAATCATCAACCGCTGACAAGCATCCTGTAGTCGCTGGATATG > DH1/2726016‑2726316 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |