Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,708,8050TA27.1% 112.4 / 38.3 155R629R (CGT→CGA) rsxCSoxR iron‑sulfur cluster reduction factor component; putative membrane‑associated NADH oxidoreductase of electron transport complex
Reads supporting (aligned to +/- strand):  ref base T (46/43);  new base A (30/3);  total (95/60)
Fisher's exact test for biased strand distribution p-value = 4.48e-05
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 155 total aligned reads displayed.

CCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGA  >  NC_000913/1708656‑1708951
                                                                                                                                                     |                                                                                                                                                  
ccAGAACACCAGGTCGATCCGCGAAAAACCGCCGTAGAAGCAGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTg                                                                                                                                                   <  3:1151592/151‑1 (MQ=255)
         catgcggATCCGCGTAAAGCGGCCGTAGAAGCCGCTATTGCCCTTGCCATATCGCGCAAGCTGGAACAGCAACAGGATAATCCGGAACCAGAACAACAGGGCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCAc                                                                                                                                          <  4:884543/145‑1 (MQ=11)
          cccgcgctCCCCGCAAACCCGCCGTTGTATCATCTATTGCCCGGGCCAAAGCGCGCAATATTGAACAGCAACATGCTAATGCGTAACCTGATCTACAGGGCTATCCCCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACg                                                                                                                                         <  8:1354282/144‑1 (MQ=2)
            gatgATCCTCGAAAAACTGCAGTCGATGCAGCTATTGCCCGGGCAAAATCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAAGCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGc                                                                                                                                        <  5:1468213/147‑1 (MQ=11)
              cGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCaa                                                                                                                                      <  1:834979/150‑1 (MQ=255)
                agccgcggtaacctgccgTCGAAGCAGCTATTGCCCGGGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACCACAGGGCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCt                                                                                                                                   <  7:132515/137‑1 (MQ=11)
                      ccAACGCCGCCGGCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACa                                                                                                                             <  4:192874/150‑1 (MQ=255)
                        aaaGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAAAAAAGGAAGATCCTCGAAAAGCCGAAGACGAAGCGGATATTGCAAGATCAAAAGCACGCAAGCTGGaaa                                                                                                                              >  1:819250/1‑147 (MQ=14)
                          aGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACATCCTAATCCCGACCGAGAAGAAAAGGTAGATCCGCTAAAAGAAGCAGTCGAAGCGGCGAGTGACAGTGAAAAAGAACGCAAGCTGGGACGGccg                                                                                                                         >  6:1298413/1‑149 (MQ=2)
                          aGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTAGATCAGAAGCACGAAAATGCGGAAAAAGAAGAACACGTATATCAGCGCAAAGCTGCCGTCGCAGACGATATTGAAAAAGCCAAAGCTCGCAAGCTGGAGCGGCac                                                                                                                         >  1:535557/1‑150 (MQ=2)
                              gtcgTCGATTCCGCTATTGGCCGCGCTTAAGATCGGAATCTGGAACAGCTTCAGGATAATTCGGAAGCAGAACCCGAGGGCGATCCTCGCAAATCGGCCGTCGAAGCAGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAgg                                                                                                                     <  2:578645/149‑1 (MQ=2)
                              gccgTAGAAGAAGCTATTTCCCGGGACAAATCTCGGAAGCTGGAACATCAACAGGCTAATGCGGAAGCAGAAGAAGAGGTCGATCCTCGCAAAGCCGCCGTCGAAGCCGCTAATGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACa                                                                                                                       <  2:1602168/149‑1 (MQ=11)
                                 gTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTAGATCCGCGCAAAGCCGCAGTAGAAACAGCTAAAGCCCGTCCCAAAGCACCCAAGCTGGAACAGAAACAGACt                                                                                                                   >  2:656803/1‑150 (MQ=14)
                                   cGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTGGATCCGCGCAAAGCGGCAGTGGACGCGGCTATTGCCCGCGCCCACGCCCGCAAGCGGGCCCAGCAGCAGGCtctt                                                                                                                >  3:1709117/1‑148 (MQ=14)
                                   cGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCAGTAGCAGCCGCTATTGCCCGAGCCCAGGCCCGCAAGCCCGCCCAGCACCAGGCTGAt                                                                                                                >  5:1519242/1‑151 (MQ=14)
                                         cGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGATAAAGCAAGACCAGAAGGAAAGGTAAATCAGAGCAAATAAGACTACGAAGCGGCTATAGCCCGATCCAAAAAAAGAAAGCTGGACCAGCGACAGGcgcgggggggg                                                                                                          >  1:647509/1‑141 (MQ=9)
                                              ttGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCAAATCCGAAGACAGAAGAAGAGGGAAATACGCTAAGAGAAGCAGTAGAACGCGCTAGTGCCCGTGACAAATAAAAAAATCTGGAACAGCACCCGGcggcgggggggcgcgg                                                                                                     >  1:144307/1‑136 (MQ=2)
                                                gCCCGGGCCAAAGCGCGCAAGCTGGAACACCAACAGGATAATCCCGACCCAGAACCACAGGGCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGGGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGaac                                                                                                   <  4:538865/151‑1 (MQ=11)
                                                 cacggccaacaccaggcAAACTGGAACAACTACAGGAAACTCCGGACCCAGCAACACTTGCGGATCCCCGCAAACCCGCCGTCGAAGCCGCTATCGCCCGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGaaca                                                                                                  <  5:124355/136‑1 (MQ=2)
                                                    ccgacAAATCCCGCAATCTGGAAGAGCAACAGGCTAATCCGGACCCAGAACAACAGGCCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAacaaca                                                                                               <  4:354466/147‑1 (MQ=11)
                                                       aataatgtgggaatcTGGAAGACCATCAGGAAAATTAGGAACCAGAACAAGATGTTGATCCTCGTAAATCTGCCGTCGAAGCAGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGt                                                                                            <  2:187368/137‑1 (MQ=2)
                                                        cAAACCTCGCAAGCTGGAACACCAACAGCATAATCCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCAGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTc                                                                                           <  3:1214622/151‑1 (MQ=11)
                                                         aaaGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTAGATCCGCGCAAAGCAGCAGTAAGATCCGATAATCCACGTGGAAAAGAACTCAAGATGGAACAGAAAAACTCTAATGCGGACCCCGAACAAAAgaaa                                                                                           >  6:364066/1‑147 (MQ=2)
                                                          aacggcgcAATCTGGAAGAGCACCAGGATAATCCCGAACCAGAACAACATGGCGATCCTCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGa                                                                                         <  4:1485898/147‑1 (MQ=11)
                                                           aGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTAGATCCGCGCAAAGCCGCAGTAGAAGCAGATATTAACAGAGACAAAGAACGAAAGATTGAACACAAAAATGAAAATCACGAGCCAcaacaaaacataaa                                                                                         >  2:1186172/1‑142 (MQ=2)
                                                              gcgcAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCcg                                                                                     <  4:204381/151‑1 (MQ=40)
                                                               cggaatcaggAAGACCAACAGCATAATTCCGAACCAGAACAAGTTGGTGATCCTCGTAAACCTGCCGTCGAAGCAGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGAt                                                                                        <  2:262242/139‑1 (MQ=2)
                                                                  aaGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGCAGCCGCTATTGCCCGAGCAAAAGCCCAAAAACCCGAACAGCAACAGGCTAAACACGAGCCCTAaaaacaattaacaaaccct                                                                                  >  6:953197/1‑137 (MQ=2)
                                                                   aGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCAGTAGACGCCGCTATTGCCCGAGCGAACGCAATAAAGCGCGACCAGCACCAGGCTATACACGAGGCAGAACACCAGGTCgcaaccccca                                                                                 >  3:880034/1‑141 (MQ=9)
                                                                    ccTGGAACACCAACAGGAAAATCCCGAACCAGAACCCCAGGCCGATCCCCGCAAACCGGCCGTCGAAGCCGCTATTGCCCGGGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCaaa                                                                               <  5:227849/150‑1 (MQ=11)
                                                                     cagtaaCATCATCAGGAAAATTAGGAACCAGAACAACATGCCGATCCTCGCAAATCAGCCGTAGAAGCAGCTATAGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAg                                                                              <  6:496882/147‑1 (MQ=11)
                                                                       ggaagacctaCAGGATACTTCGGAACCAGCAACACTTGGCGATCCCCGCAAACCAGCCGTCGAAGCAGCTATTGCCCGCGCCAAAGCCCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAgcc                                                                            <  5:1061379/142‑1 (MQ=11)
                                                                       ggAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGGAGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAgcc                                                                            <  2:953227/151‑1 (MQ=255)
                                                                        gaagaccAACAGGATACTGCCGAAGCAGAACCAGAGGGCGATCCGCGCAAAGCCGCCGTCGAAGCAGCTATTGCCCGAGCCAAAGCTCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAgcc                                                                            <  7:518270/144‑1 (MQ=11)
                                                                         aaCAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTGGATCCGCGCAAAGCGGCAGTGGCAGCGGCTATTGCCCGAGCGCACGCCAGAAACCGCGCCCAGCACCAGGCTCTTGCCGAGCCCGAACACCAGGTCGCTcagagcccaccagc                                                                          >  3:458359/1‑138 (MQ=2)
                                                                              caccaggaaaaTGCCGAACCAGCACCACATGCCGATCCCCGTAAACCCGCCGTAGAAGCAGCTATCGCCCGCGCCAAAGCTCGCAAGCTGGAACAGCAACAGGCTAATGCCGACCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCg                                                                     <  4:31316/142‑1 (MQ=11)
                                                                              cAACAGCCAAATCCCGACCCAGCACACCAGGCTGATCCCCGCAAACCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCg                                                                     <  7:735550/151‑1 (MQ=11)
                                                                               aaCAGGCAACTCAGGACCCAGCACCACAGGCCGATCCACGCAAACCTGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCTCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGa                                                                    <  4:622810/151‑1 (MQ=11)
                                                                                aCAGGCTAATGCGGAACCAGCACCCCATGGCGATCCGCGCAAACCTGCCGTCGAAGCAGCTATTGCCCGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGaa                                                                   <  3:611885/151‑1 (MQ=11)
                                                                                  aGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGAGCAAAAGCCATCAAACGCGAACAGCAGCAGGATCAAAACGAGCAATAAGAACAGATGCATCAGCTCAAAgccaaagtagaagc                                                                 >  8:1160051/1‑140 (MQ=2)
                                                                                   ggCTACTCCGGAACCAGAACAACATGGCGATCCCCGCAAAGCCGCCGTCGAAGCAGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGcc                                                                <  7:1666529/151‑1 (MQ=11)
                                                                                   ggCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGCCGCCGCTATTGCCCGGGCCAAAGCACGCAAGCGGGACCAGCACCAGGCTCATCCCGAGCCAGAACACCAGGTCGCTCCGCGCACAGCCGCCGttgccgcg                                                                >  3:136307/1‑144 (MQ=14)
                                                                                   ggCTAATGCGGAACCAGAAGAACAGGTAGATCCGCGCAAAGCAGAACTCAAGCCCGAAGTTTACCGAAACAAAGCACGCAATATGGTACATCTACATGCTAAAGCGGTCCAATAAAAAAAGGTTGATCCGCGCGAAgcggggggccagggg                                                                >  1:1131013/1‑138 (MQ=255)
                                                                                     cTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGAGCAAAAGCACGAAACCTCGAACAGCAACAGGATAATGCCGAGCCAGAAAAACAGGTAGATCCGAGCAAATCCGCAGTAGAAGCCGc                                                              >  2:1227002/1‑151 (MQ=14)
                                                                                      tAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGCAGCGGCTATTGCCCGCGCCCACGCCCGCAACCACGCCCAGCAGCAGGCTAATGCCGAGCCAGAACACCACGTCGCACCGCGCACAgccgcagagcacgcctc                                                              >  3:1688391/1‑138 (MQ=9)
                                                                                      tAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGCGCAAAAGCAAGCAACCACGAACAGCAACAGGCTACAGCCGACCCAGAACCACACGTCGCTAAGCGCCAAgccgaagtcccaccgcct                                                             >  7:702686/1‑137 (MQ=9)
                                                                                       aaTGCGGAACCAGAAGAACAGGTCGATCCGCGCAACGCGGCAGTGGCAGCGGCTATTGCACGGCACAGCGCACGCCAGCTGTACCGTCACCATCCTACTGCGGGTCCGCCAGAACAGGTTGCTCAGCGCAAAGCGGCCGtgggcgcggcgg                                                            >  5:1343352/1‑140 (MQ=255)
                                                                                          gCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCGGCCGTCGACGCCGCTATTGCCCGTGCGAACGCCAGAAAGCGGGAACAGCAGCAGGGTCATGCCGAGACAGCGGAAGAGGACCATCCGCGCAAAGCGGCAGtttacgcgcctactg                                                         >  3:972058/1‑137 (MQ=255)
                                                                                           cGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCGGCCGTCGAAGCGGCTATTGCCCGGGCCAAAGCGCGCACAATGGAACACCAACAGCCTAATGCCGCGCCAGAAGAACAGGTAGCTCCGCGCCACGCGGCAGTAGAAGCGGCTATTGc                                                        >  7:311293/1‑151 (MQ=11)
                                                                                             gAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCGGCTATTGCCCGCGCCAAAGCACGCACGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAAGAACAGGTAGATCCGCGCAAAGCCGCCGTGGAAGCCGCTATTGccc                                                      >  3:593884/1‑151 (MQ=11)
                                                                                                ccAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAACGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTAGAAGCCGATAGAGCCCg                                                     >  7:253341/1‑149 (MQ=255)
                                                                                                 cagcaccccAGGCCGATCCTCGTAAACCAGCCGTCGAAGCCCCTATCGCCCGAGCCAATGCACGGAAGCTGGAACAGCAACAGTCTAATGCGGACCCAGAACAACAGGCCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGc                                                  <  4:1475269/143‑1 (MQ=11)
                                                                                                  cgcaccagttgttgATCCGCGGAAAACGGCCGTCGAAGCCGCTATAGCCCGCTCCAAAGCACGCATGCTGGAACAGCAACAGGCTAATCCCGACCCAGAACAACAGGGCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGcc                                                 <  3:744079/138‑1 (MQ=11)
                                                                                                  ccccgaccccgccGATCCCCGCAAACCAGCCGTTGAATAATCTATAGCCCGAGCCAAACCACGCAAGCTTGAACAGCAACAGGATAATCCCGATCCAGAACAACACGCCGATCCCCGCAAACCCGCCGTCGAAGCCGCTATTGCCCGAGcc                                                 <  5:425600/139‑1 (MQ=2)
                                                                                                   gaagaaCAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGGGCCAACGCACGCAACCGGGAACAGCACCAGGGTAATGCCGAGCCCGAACAACAGGTCGCTCCGCGCACAGCCGCCGTGGCCGCCGCTATTGCCCgcgca                                                 >  3:395057/1‑149 (MQ=14)
                                                                                                    aagaaCAGGTCGATCCGCGCAAAGCCGCAGTCGAAGCCGCTATTGCCCGAGCAAAAGCCCGCAACCAGGAACAGCAACAGGCTAAAGCCGAGCCAGAAAAACAGGTAGATCAGCGCAAAGCAGCCGTAGCAGCAGCTATTGCCCGAGCCa                                                >  2:396290/1‑150 (MQ=14)
                                                                                                        aCAGGTCGATCCGCGCAAAGCAGCCGTCGAAGCCGCTATTGCACGAGCCAAAGCACACAACCGAAAACAGAAAACGACTAATACAGAGAAAGAAAAACAGGTGGATACGCGCAAAGCCGGATTCGAATAATATATTGCCCGAGCCAAAgcg                                           >  1:519158/1‑151 (MQ=2)
                                                                                                          aGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGGGCCAAAGCCCGCAAGCTGGACCAGCACCAGGCTAATGCCGAGCCAGAACAACAGGTGGATCCGCGCAAAGCGGCCGTCGCCGCCGCTATTGCCCgcgcgcaggcgac                                         >  3:1082533/1‑142 (MQ=11)
                                                                                                           ggTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGGGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGCTCCGCGCAAAGCCGCCGTAGCCGCCGCTATTGCCCGAGcacacgccacc                                        >  4:1549014/1‑141 (MQ=14)
                                                                                                           ggTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGTGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTAGAAGCGGCTATTGCCCgcgcgcagggcggc                                        >  5:48401/1‑141 (MQ=14)
                                                                                                           ggTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCAGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCTCGCAAAGACGCAGTAGAAGCGCCTATTGCCCGAGCAAAAgcgat                                         >  2:604513/1‑148 (MQ=14)
                                                                                                            gTCGATCCGCGCAAAGCCGCCTTCGCAGCCGCTATTGCCCGTGCGAAAGCACGCAATCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACACGTAGATCCGCGCAAAGCGGCCGTAGCAGCGCCTATTGCCCGAGcacatccccta                                        >  5:804454/1‑140 (MQ=14)
                                                                                                              ggatcccctgaaaGCTGCCGTGGAAGCAGCTATTTCCCGGGCCAAAGCACGCAAGCTGGAACACCAACAGGCTACTGCCGACCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCaaa                                     <  5:1403650/141‑1 (MQ=11)
                                                                                                              cGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACTCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAAGAACAGGTAGATCAGCGCAAAGCGGCAGTTGCAGCGGCTATTGCCCGCGCAAAGgcaataaa                                      >  6:31311/1‑144 (MQ=11)
                                                                                                               gATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGGGCCAAAGCACGCAAGCGGGAACAGCAACAGGCTAATGCCGAGCCAGAAGAACAGGTCGATCCGCGCAAAGCGGCCGTGGCAGCGGCTATTGCCCGCGCCAACGCGCGCaccg                                    >  3:254796/1‑148 (MQ=11)
                                                                                                                 tCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTCGACGCCGCTATTGCCCGAGCGAAAgccagaaaaccc                                  >  8:1181932/1‑141 (MQ=14)
                                                                                                                  ccGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGAAGCGGCTATTGCCCGCGCGCAAgccaacaaagcgg                                 >  1:887733/1‑140 (MQ=14)
                                                                                                                   cgcgCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTCGAACAGCAACAGGCTAATGACGAGCCAGAAGAACAGGTAGATCCGCGCAAAGCGGCAGTAGAAGCGGCTATTGCCCGAGCAAAAGCGAACAAAcccgc                                >  1:498272/1‑147 (MQ=11)
                                                                                                                    gcgcAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTGGCAGCGGCTATTGCCCGCGCGAACGCCAGAAAACGCGac                               >  1:674980/1‑150 (MQ=14)
                                                                                                                      gcAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTGGATCCGCGCAAAGCGGCAGTCGCAGCGGCTCTGGCCCGCGCCCAAGCCCGCAAACTGGaccc                             >  7:1260277/1‑148 (MQ=14)
                                                                                                                       cAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCCGCCGTAGAAGCGGCTATTGCCCGAGCAAAGGCCCTAAAACCGGAAc                              >  8:359988/1‑149 (MQ=11)
                                                                                                                        aaaGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTGGATCCGCGCAAAGCGGCCGTCGCAGCGGCTATTGCCCGCGCGAACGCGCGCaagggggcccagc                           >  4:273168/1‑140 (MQ=11)
                                                                                                                        aaaGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAACAACAGGTCGATCCGCGCAAAGACGCCGTAGCCGCCGCTATTGCCCGCGCGCAAGCACGCaaagccgcacagc                           >  7:59370/1‑141 (MQ=11)
                                                                                                                        aaaGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAAGAACAGGTAGATCCGCGCAAAGCGGCCGTCTCCGACGCGATAGCCCGAGCCATAgcgcgccatcacgagctgc                           >  7:1618936/1‑138 (MQ=14)
                                                                                                                        aaaGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGAGCCAAAGCCCGCAAACTCGAACAGc                           >  3:939685/1‑151 (MQ=255)
                                                                                                                        aaaGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCAGCCGTCGAAGCCGCTATTGCCCGAGCCAAAgcgcgcccaagggccgagg                           >  2:48152/1‑138 (MQ=255)
                                                                                                                        aaaGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCCGTAGAAGCCGCTATTGCCCGCGCCAAGGCGATCAACCGCGACCAGc                           >  5:852424/1‑151 (MQ=14)
                                                                                                                         aatctgccgTTGAAGCAGCTATTGCCCGTGCCAAAGCCCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAgc                                                                             <  7:625478/95‑1 (MQ=11)
                                                                                                                         aaGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCCAAGCGCGCAAACGGGAACAGc                           >  7:1102110/1‑150 (MQ=255)
                                                                                                                           gccgccGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGCAGCGGCTATTGCCCGCGCGAAGGCCCGAAAACGCGCCCAGCagc                        >  1:1933/1‑149 (MQ=14)
                                                                                                                            ccgccgTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGACGCGGCTATTCCCCGCGCGAAAGCAAAAAAACACGAACAGCAAc                        >  8:21852/1‑150 (MQ=14)
                                                                                                                              gccgTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAAGAACAGGTGGATCCGCGCAAAGCGGCCGTAGAAGCGGCTATTGCCCGCGCGAAAGCCCGAAAACGCGACCAGCAACAgg                     >  7:391713/1‑151 (MQ=11)
                                                                                                                               ccgTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGACGCGGCTATTGCCCGCGCGAAAGCCAGCAAACCCGAACAGCacaaggc                    >  8:111655/1‑145 (MQ=14)
                                                                                                                                 gTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCCGTCGAAGCGGCTATTGCACGCGCGAAAGCCATCAAGCTGGAACAGCAACAGGCt                   >  3:1596606/1‑150 (MQ=11)
                                                                                                                                 gTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTAGAACAGCAACAGGCTAATGCCGAGCCAGAAGAACAGGTAGATCCGCGCAAAGCGGCAGTAGAAGCCGCTATTGCCCGCGCAAAAGCCAGCAAACCCGAACAGCACCAGGCt                   >  1:1620808/1‑150 (MQ=11)
                                                                                                                                  gccccgccgcgagcccccGCGCCCCAGCTCGGATGCTGGAAGCGCAACAGGCTAATGCCGATCCAGTACACGGCGTGGATCGGCGCATTGCGGGCGTCGCAGCCGCTATCGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTaa                 <  3:355160/136‑1 (MQ=255)
                                                                                                                                     aaGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAACAACAGGTTGATCCGCGCAAAGCGGCCGTAGAAGCGGCTATTGCACGCGCAAACGCAAGAAAACGGGAAAAGCAACAGGCTAATGc              >  8:362483/1‑151 (MQ=11)
                                                                                                                                          gCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAACGCGAGAAAACGCGAACAGCACCAGGCTCATCCGGAGc         >  4:109325/1‑151 (MQ=14)
                                                                                                                                           cTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGAAGCGGCTATTGCCCGCGCACAAGCCAACAAACGCGCCCAGCAGCAGGCTAAtaagctcgc        >  1:1052710/1‑143 (MQ=11)
                                                                                                                                            tATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTGGATCCGCGCAAAGCCGCCGTAGACGCCGCTATTGCCCGCGCCAACGCCCACAAACGCGCACAGCACCAGGCtgaacaggagccc       >  6:1451554/1‑139 (MQ=14)
                                                                                                                                            tATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCGAAAGCGCGCAAACCCGAACAGCAGCCGGCTAAAGCGGAGcc        >  1:1097264/1‑150 (MQ=255)
                                                                                                                                            tATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCAGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCTCGCAAGCGCGACCAGGACCCgaatagtggaggcga        >  2:132093/1‑136 (MQ=11)
                                                                                                                                            gatcgCCCGTGCCAAAGCACGCAAGCGGGAACAGCAACACGCTACTTAGGAGCCAGAAGAACAGCGCGATGCGCTCAACCCCTCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCa       <  7:1383389/147‑1 (MQ=14)
                                                                                                                                             aTTGCCCGTGCCAAAGCTCGCAAGCTGGAACAGCAACAGGCTAATGCCTAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCa       <  2:1237969/150‑1 (MQ=255)
                                                                                                                                             aTTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGCGCAAAAGCCCGCAAACGCGAACAGCAACAGGCTAAtcacgagcc        >  8:1658462/1‑141 (MQ=14)
                                                                                                                                               tGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGACCAACAGGTCGATCCGCGCAAAGCGGCAGTGGAAGCCGCTATTGCCCGAGCAAACGCGCCCAAACCGGAACAGCACCAGGGTAATGCGGAGcacga     >  7:757553/1‑146 (MQ=14)
                                                                                                                                               tGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCGCACGCGAGCAAACGGGCCCAGCACCAGGGTAATGCGGAGCCaga     >  4:383955/1‑150 (MQ=14)
                                                                                                                                               tGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCCGTAGACGCCGCTATTGCCCGCGCAAAAGCCCGCAAACGGCACCAGCACCAGGCTAATGCGCAGCCaga     >  1:492691/1‑150 (MQ=14)
                                                                                                                                                gCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGCGCACAGGCCCAAAAACCCGAACAGCACCAGGCTAATAAGGAGCCagaa    >  8:531726/1‑150 (MQ=14)
                                                                                                                                                 cccGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCGGCTATTGCCCGCGCCAACGCCCGCAAACGGGAACAGCAGCAGGCTCATGCGGAGGCagaagt  >  5:267378/1‑150 (MQ=14)
                                                                                                                                                     |                                                                                                                                                  
CCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGA  >  NC_000913/1708656‑1708951

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑