| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,708,883 | 0 | C | A | 27.2% | 319.1 / 33.4 | 234 | V655V (GTC→GTA) | rsxC | SoxR iron‑sulfur cluster reduction factor component; putative membrane‑associated NADH oxidoreductase of electron transport complex |
| Reads supporting (aligned to +/- strand): ref base C (115/46); new base A (58/2); total (184/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.38e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 237 total aligned reads displayed.
CAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT > NC_000913/1708734‑1709033 | cAACAGCCAAATCCCGACCCAGCACACCAGGCTGATCCCCGCAAACCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCg < 7:735550/151‑1 (MQ=11) aaCAGGCAACTCAGGACCCAGCACCACAGGCCGATCCACGCAAACCTGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCTCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGa < 4:622810/151‑1 (MQ=11) aCAGGCTAATGCGGAACCAGCACCCCATGGCGATCCGCGCAAACCTGCCGTCGAAGCAGCTATTGCCCGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGaa < 3:611885/151‑1 (MQ=11) ggCTACTCCGGAACCAGAACAACATGGCGATCCCCGCAAAGCCGCCGTCGAAGCAGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGcc < 7:1666529/151‑1 (MQ=11) cTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGAGCAAAAGCACGAAACCTCGAACAGCAACAGGATAATGCCGAGCCAGAAAAACAGGTAGATCCGAGCAAATCCGCAGTAGAAGCCGc > 2:1227002/1‑151 (MQ=14) cGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCGGCCGTCGAAGCGGCTATTGCCCGGGCCAAAGCGCGCACAATGGAACACCAACAGCCTAATGCCGCGCCAGAAGAACAGGTAGCTCCGCGCCACGCGGCAGTAGAAGCGGCTATTGc > 7:311293/1‑151 (MQ=11) gAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCGGCTATTGCCCGCGCCAAAGCACGCACGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAAGAACAGGTAGATCCGCGCAAAGCCGCCGTGGAAGCCGCTATTGccc > 3:593884/1‑151 (MQ=11) ccAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAACGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTAGAAGCCGATAGAGCCCg > 7:253341/1‑149 (MQ=255) cagcaccccAGGCCGATCCTCGTAAACCAGCCGTCGAAGCCCCTATCGCCCGAGCCAATGCACGGAAGCTGGAACAGCAACAGTCTAATGCGGACCCAGAACAACAGGCCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGc < 4:1475269/143‑1 (MQ=11) aagaaCAGGTCGATCCGCGCAAAGCCGCAGTCGAAGCCGCTATTGCCCGAGCAAAAGCCCGCAACCAGGAACAGCAACAGGCTAAAGCCGAGCCAGAAAAACAGGTAGATCAGCGCAAAGCAGCCGTAGCAGCAGCTATTGCCCGAGCCa > 2:396290/1‑150 (MQ=14) gaaCAGGTCGATCCGCGCAAAGCGGCCGTGCAAGCCGCTATTCCCCGAGCGAAAGCAAGCAAGCTGGAACAGCAGCAGGCTAATGCCGACCCAGAAGAACACGTCCATCCGCCCAACGCCCCAGTTGACCCCGCGATTGcccccgcaacgc > 4:329360/1‑142 (MQ=255) aGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGGGCCAAAGCCCGCAAGCTGGACCAGCACCAGGCTAATGCCGAGCCAGAACAACAGGTGGATCCGCGCAAAGCGGCCGTCGCCGCCGCTATTGCCCgcgcgcaggcgac > 3:1082533/1‑142 (MQ=11) ggTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGGGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGCTCCGCGCAAAGCCGCCGTAGCCGCCGCTATTGCCCGAGcacacgccacc > 4:1549014/1‑141 (MQ=14) ggTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGTGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTAGAAGCGGCTATTGCCCgcgcgcagggcggc > 5:48401/1‑141 (MQ=14) ggTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCAGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCTCGCAAAGACGCAGTAGAAGCGCCTATTGCCCGAGCAAAAgcgat > 2:604513/1‑148 (MQ=14) gTCGATCCGCGCAAAGCCGCCTTCGCAGCCGCTATTGCCCGTGCGAAAGCACGCAATCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACACGTAGATCCGCGCAAAGCGGCCGTAGCAGCGCCTATTGCCCGAGcacatccccta > 5:804454/1‑140 (MQ=14) tCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTCGACGCCGCTATTGCCCGAGCGAAAgccagaaaaccc > 8:1181932/1‑141 (MQ=14) cgcgCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTCGAACAGCAACAGGCTAATGACGAGCCAGAAGAACAGGTAGATCCGCGCAAAGCGGCAGTAGAAGCGGCTATTGCCCGAGCAAAAGCGAACAAAcccgc > 1:498272/1‑147 (MQ=11) gcgcAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTGGCAGCGGCTATTGCCCGCGCGAACGCCAGAAAACGCGac > 1:674980/1‑150 (MQ=14) gcccacacccgccgGCGCCGCCGCTCTCGCCCGCGCCAAAGCCCGCAAGCTTTAACAGCAACAGGCTAATGCCGACCCACAAGACCACGGCGAGCCGAGCAAAGCCGCCGGCGATTCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGaa < 4:1243708/143‑1 (MQ=255) gcAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTGGATCCGCGCAAAGCGGCAGTCGCAGCGGCTCTGGCCCGCGCCCAAGCCCGCAAACTGGaccc > 7:1260277/1‑148 (MQ=14) aaaGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTGGATCCGCGCAAAGCGGCCGTCGCAGCGGCTATTGCCCGCGCGAACGCGCGCaagggggcccagc > 4:273168/1‑140 (MQ=11) aaGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCCAAGCGCGCAAACGGGAACAGc > 7:1102110/1‑150 (MQ=255) gccgccGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGCAGCGGCTATTGCCCGCGCGAAGGCCCGAAAACGCGCCCAGCagc > 1:1933/1‑149 (MQ=14) ccgccgTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGACGCGGCTATTCCCCGCGCGAAAGCAAAAAAACACGAACAGCAAc > 8:21852/1‑150 (MQ=14) gccgTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAAGAACAGGTGGATCCGCGCAAAGCGGCCGTAGAAGCGGCTATTGCCCGCGCGAAAGCCCGAAAACGCGACCAGCAACAgg > 7:391713/1‑151 (MQ=11) ccgTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGACGCGGCTATTGCCCGCGCGAAAGCCAGCAAACCCGAACAGCacaaggc > 8:111655/1‑145 (MQ=14) gccccgccgcgagcccccGCGCCCCAGCTCGGATGCTGGAAGCGCAACAGGCTAATGCCGATCCAGTACACGGCGTGGATCGGCGCATTGCGGGCGTCGCAGCCGCTATCGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTaa < 3:355160/136‑1 (MQ=255) gAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGTCGCCGTCGAAGCCGCTATTGCCGGCGCCAACGCGCGCTCTCGGGAACAGCAACCGGCGAATg > 3:1216033/1‑151 (MQ=14) cTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGAAGCGGCTATTGCCCGCGCACAAGCCAACAAACGCGCCCAGCAGCAGGCTAAtaagctcgc > 1:1052710/1‑143 (MQ=11) tATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTGGATCCGCGCAAAGCCGCCGTAGACGCCGCTATTGCCCGCGCCAACGCCCACAAACGCGCACAGCACCAGGCtgaacaggagccc > 6:1451554/1‑139 (MQ=14) gatcgCCCGTGCCAAAGCACGCAAGCGGGAACAGCAACACGCTACTTAGGAGCCAGAAGAACAGCGCGATGCGCTCAACCCCTCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCa < 7:1383389/147‑1 (MQ=14) aTTGCCCGTGCCAAAGCTCGCAAGCTGGAACAGCAACAGGCTAATGCCTAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCa < 2:1237969/150‑1 (MQ=255) aTTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGCGCAAAAGCCCGCAAACGCGAACAGCAACAGGCTAAtcacgagcc > 8:1658462/1‑141 (MQ=14) gCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGCGCACAGGCCCAAAAACCCGAACAGCACCAGGCTAATAAGGAGCCagaa > 8:531726/1‑150 (MQ=14) gTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTGGATCCGCGCAAAGCCGCAGTCGAAGCCGCTATTGCCCGCGCAAACGCCACAAAACGCGCACAGCAAAAGGCAAATCCGCAgagaaaagcac > 5:1296304/1‑140 (MQ=9) cAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCt > 3:1009078/1‑127 (MQ=255) accgatctaGCTGGAACAGCAACATTCTTATTATTATCTAGATCAAAAGTTCGATCCGCTCAATTACGCCTTCTATGATTCTATTGCCGTAGCTATAGCGATCTATCTGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGAt < 8:1287198/143‑1 (MQ=255) aGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGCGCGAAGGCCACCAAACGCGCACAGAAAGCAGCATCTGCCGACCCagaaccacaccgaga > 5:1271450/1‑139 (MQ=2) aCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTAGCCGCCGCTATTGCCCGCGCCAAAGCCCACAAACCGGCCCAGCACCCGGCTAATCCCGAGGCAGAAGACCACGTTGATcac > 2:1630259/1‑149 (MQ=14) gCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAGCGGTAGCAGGACCAGGCGACTGCCGAGCCAGCAGATGACGAGGATCcgcg > 3:1591472/1‑151 (MQ=11) aaGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTGGATCCGCGCAAAGCCGCAGTGGCAGCCGCTATTGCCCGCGCGAACGCGACCAAACGCGAACAGCAGCAGGGTCAAGCGGAGCCAGaacaactagtgcagaagcga > 2:1523202/1‑136 (MQ=9) aaGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCCGTCGAAGCCGCTATTGCCCGCGCGAACGCCAGCAAACGCGCCCAGCACCAGGCTAATCCGGAGCCAGAACAACAGGTTGATCcgcgg > 3:184196/1‑149 (MQ=14) aaGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGACGCCGCTATTGCCCGCGCACACGCGCGCAAACGGGAACAGCAGCAGGCTAATGCCGAGCCAGAACACCAGGTCGCTCcgcgg > 4:1352839/1‑149 (MQ=11) aaGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCAGTAGACGCCGCTATTGCCCGCGCACACGCCAAAAAACCCGCCCAGCAACAGGATAAAAAGGAGCCATAAGAACAGCGTGCTCCgcgc > 6:743829/1‑150 (MQ=2) aGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAACGCGCGCAAACGGGACCAGCACCAGGCTAATGCGGAGCCAGAAGAACAGGTTGCTCCGCGCa > 3:43865/1‑150 (MQ=255) ccaccccatccgccTAATGCCGACCCATAATAATATTTAGATCCGCGCAAAGACGCCGTCGAAGACTATATTGTACTATCTTAAGCTAGAATACGGTAATAGGATCTGGCTAATGCGGATCCAGAAGAACAGGTTGATCCGCGCAAAGCTg < 6:1338011/138‑1 (MQ=9) aGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGAGCAAACGCGAGAAAACCGGAACAGCACCAGGCTAATGAGGAGCCAGAAGAACAGGATGATCAGAGCAAAGCTGACGt > 5:1404472/1‑151 (MQ=14) gCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGtt > 8:1312555/1‑150 (MQ=255) cctacaggaaactcccGACCCAGAACCCCTGGTGGATCCCCGCAAATCCGCCGTCGAAGCAGCTATTGCCCGCGCCAAAGCGCGCAAACTGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTc < 3:1183190/137‑1 (MQ=17) aaCAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCCAAGCGAGCAAACCCGAACAGCAACCGGCTAATGAGGAGCCAGAACAACAGTTTGATCCGCGCAAAGCAGCAGtgc > 5:264063/1‑148 (MQ=14) aCAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCAGCCGTCGAAGCCGCTAAGCGCCGAGCCGCCTCGGGGAGGGGGGCACAGGACGCGGCTAATGCGGAGCCAGAAGACCAGGTAGATCGGAGCAAAGCTGCCGTCgcg > 1:346833/1‑149 (MQ=9) cAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTCATCCGCGCAAAGCTGCAGTCGa > 7:602962/1‑149 (MQ=255) cAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTCGAAGCGGCTATTGCCCGCGCCAACGCGAGCAAACGGGAACAGCAACATGCTAATCCCGAGCCAGAAGAACAGCTTGATACTCGAAAAGCTGCAGtggccg > 5:972378/1‑146 (MQ=14) aGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCCAGCAAACGGGACCAGCACCCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCACAGCTGCAGTCGCAGc > 7:985416/1‑151 (MQ=17) aGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGCGCAAAAGCGCGCAAACCCGAACAGCAACAGGATAATCCGGAGCCAGAAGAACAGCTGCATCAGCTCAAAGCTGCCGTAGAAGc > 2:881839/1‑151 (MQ=14) aaggCCGAGCCAGAACAACATGTCGATCCGCCCAACGCCGCCGTCGACGCCTATATTGACCGCCCCACAGCGCGCACACGTTAAGAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTa < 7:346407/148‑1 (MQ=21) aTGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCGGCTATTGCCCGCGCCAAAGCGCGAAAACGGGCACAGCAACCGGCTAATGCGGAGCCAGAAGACCAGGTTCATCCGCGCAAAGCGGCAGTGGCAGCTGCGAt > 1:1397640/1‑151 (MQ=14) gcggaaccAGAAGAACAGGTCGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGAGCCAAAGCCAGAAAGCTGGACCAGCAACAGGCTAATGACGAGCCAGAACACCAGGTCGCTCAGCGCAAATCCGCAGATGCACCGGCTATTg > 7:939186/7‑151 (MQ=14) ccGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCAAAAGCCCGCAAACGGGCACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCAGCGCAAAGCTGCAGTTGCAGCGGCTaatcc > 2:1006240/1‑147 (MQ=14) cGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGc > 3:340843/1‑150 (MQ=255) aGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCAGCGGCTATTGcgcg > 4:495006/1‑151 (MQ=255) gCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAAAAGGCTAATGCGGAGCAAGAAGAACAGGTAGATCCTCGAAAAGCTGCAGTATCCGCGGCTATTGCCcgc > 8:1398609/1‑151 (MQ=14) accAGAAGAACAGGTCGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGCGCCAAAGCCAGAAAGCACGAAGATCACAAGGCTACAGCGCAGCCAGACCATCAGGTTCATCCGCGGAATCAGGCCGGTGCAGCGGCTAATGAAcgc > 3:748572/2‑151 (MQ=2) cccgcccccccggccGATCCCCGCAAACCAGCCGTCGAAGCCGCTATGGCCCGCGCCAAAGCGCGCAACCGGCAACAGCAACCGGCTAATGCGGACCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCAcgcg < 5:1575590/137‑1 (MQ=17) ccAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCAcgcg > 4:778603/1‑151 (MQ=255) cAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAACGCGCGCAAACGCGAACAGCAACCGGCTCATGCGGAGCCAGAAGAACAGGTTGCTCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACgcgc > 6:9297/1‑151 (MQ=255) cAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCACCCGGCTAATGCGGAGCCAGAAGAACAGGTTGCTCCGCGCACCGCGGCAGTCGCCGCGGCGCTTGCCcgccc > 4:1280795/1‑149 (MQ=14) agaagaACAGGTCGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGAGCAAAAGCAAAAAAACACGAACAGCAAACGGATAATCCGCTTCAAGAACAACAGGTTGATCATAACAAAGCATCACTGGACGCGGCTATTgaaatata > 6:601833/1‑143 (MQ=2) aGAACAACAGGTCGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGAGCAAAAGCCCGAAAACGCGAACAGCAACCGGATAATGAGGAACCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCTATTGCCCGCGcc > 6:460501/1‑151 (MQ=14) aacaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGCAGCGGCTATTGCCCGCGCAAACGc > 2:1132012/1‑151 (MQ=14) ggTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCAGCGGCTATTGCCCGCGCGAacgcacgc > 6:296919/1‑151 (MQ=255) tCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTGGCCGCGGCTATTGCCCgcgcgcaggccagca > 1:1147460/1‑139 (MQ=14) gATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTCGCCGCGGCTATTGCACGCGCCAAGGCCAGCaacc > 5:1095925/1‑149 (MQ=14) gATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAACGCCCGCAAGc > 5:1046442/1‑151 (MQ=255) gATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAACGCCAGCAAGc > 7:845958/1‑151 (MQ=255) gATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGCAGCGGCTATTGCACGCGCCAAAGCCCGCAAGc > 7:474017/1‑151 (MQ=255) gATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTGGACGCGGCTATTGCACGCGCGAAGGCACGCAAGc > 8:319407/1‑151 (MQ=17) gATCAGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGAGCCAAATCGAGAAAACGGGAACAGCAAAAGGCTAATGAGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTCGAAGCGGCTATTGCACGCGCTAAGGCaacaaagg > 1:649287/1‑144 (MQ=17) cgccccccaccgccgccGGCGCAGCCGCTATTGCCCTTGGCAAAGCGCGCAACCGCGAACAGCTCGAGTATAATGAGGAGACAGAAGACCAGTGCGCTCCGCCCCAAGCCGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCt < 7:534915/140‑1 (MQ=255) aTCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGccacgaaccg > 6:1071399/1‑142 (MQ=255) aTCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGAAGCGGCTATTGCACGCGCCAACGCCCGCAAGcg > 2:1320458/1‑150 (MQ=255) tCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCTATTGCACGCGCAAAAGCAAGAAAgg > 2:198272/1‑148 (MQ=17) ccGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTgg > 4:472919/1‑151 (MQ=255) cgcgCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTgg > 1:1603211/1‑150 (MQ=255) cgcgCAAAGCCGCCGTCGAAGCCGCGATTGGCCGCGCCAACGCGCGCAAACGGGAACACCAACCGGCGAATGCGGAGCCAGGAGAACAGGTGGATCCGCGCACCGCTGCCCTGGCAGCGGCACTTGCACCCGCCACAGCCCGCaaacgggc > 2:1383896/1‑145 (MQ=12) gcAAATCCCCCCGCGACGCCCCTACTGCCCGAGCCAAAGCGCGCAATCTTGAACAGCAACCGGCTAATGCGTATCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCTTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACa < 1:529926/151‑1 (MQ=14) aaaatgttgcgTAGAAGCAGCTATCGCCCGAGCCAAAGCTCGCAAACTGGAACAGCAACCGGCTAATGCGGAAGCAGAACAAGAGGGTGATCCTCGCAAAGCTGCCGTCGAAGCCGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAg < 4:845101/142‑1 (MQ=11) aaaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGc < 3:830988/68‑1 (MQ=255) aaaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTGGAAGCGGCTATTGCACGCGCGAAAGCACGCAAGCTGGAACAGc > 8:41803/1‑151 (MQ=255) aaGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCCCGCAACCTGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTCGACGCGGCTATTGCCCGCGCCCAAGCCAGCAACCGGGACCAGc > 7:1308521/1‑150 (MQ=11) aaGCCGCCGGCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGACCAGCCACCGGCTAATCCGTAGCCAGAAGAACAGGTCGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCa < 7:1163250/151‑1 (MQ=14) aGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCGCAAGCAATCAAGCAGGACCAGCa > 4:108891/1‑150 (MQ=17) aGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCa > 1:1105869/1‑150 (MQ=255) cccgccgGCGAACCCGCTATCGCCCGAGCCAAAGCGCGCAAACTGGAACAGCAACAGGCTAATGCGTACCCAGAAGAACAGGGTGATCCGCTCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAAc < 7:1582024/150‑1 (MQ=14) cgccgTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTGGAACAGAGAGCGGATAATCCTCATCGAGAAAAACAGTTTAATCAAAACAAATCATCAGTCGAGTCGCCTATTGAAAAAAAAAAAGAACGCAAGCTGGAACAGcgagcg > 6:272456/1‑146 (MQ=2) gccgTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAACGCACGCAACCTGGCACAGCAACAgg > 5:338139/1‑151 (MQ=255) gccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCCACGCACGCAAGCTGGCCCAGCACCAgg > 7:577413/1‑151 (MQ=255) ccgTCGAAGACGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACATGTTGATCATCGCAAAGCTGCAGTAGAAGCGGCTATTGCAAGCGCAAAAGCAATAAAACTGGAACAGCAAAAgt > 2:1039098/1‑149 (MQ=255) cGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCCCGCAAGCTGGAACAGCAACAGGCTAAt > 3:292439/1‑151 (MQ=255) | CAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAT > NC_000913/1708734‑1709033 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |