Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,708,9010AC37.0% 169.6 / 98.3 252R661R (CGA→CGC) rsxCSoxR iron‑sulfur cluster reduction factor component; putative membrane‑associated NADH oxidoreductase of electron transport complex
Reads supporting (aligned to +/- strand):  ref base A (106/49);  new base C (83/8);  total (191/61)
Fisher's exact test for biased strand distribution p-value = 3.47e-05
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 254 total aligned reads displayed.

AAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAG  >  NC_000913/1708756‑1709051
                                                                                                                                                 |                                                                                                                                                        
aagaaCAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACCACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCa                                                                                                                                                      >  7:1500578/1‑150 (MQ=255)
 agaaCAGGTCGATCCGCGCAAAGCCGCAGTAGCAGCCGCTATTGCCCGAGCAAAAGCAAAAAACCACGAACAGCAGCAGGATAATAAAGATCCAGAGAAACACGTGGATCCGAACAAAGAAGCCGTTTCAGCAGCTATTGCACGAGccc                                                                                                                                                      >  8:495949/1‑148 (MQ=2)
    aCAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCTCGCAAGCGGGAACAGCAACAGGCTACTCCCGCCCCAGAAGAACAGGTGGATCCGCGCAAAGCAGCCGTCGAAGCCGCTATTGCCCGGGCCACAgcg                                                                                                                                                 >  5:20617/1‑151 (MQ=11)
    aCAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTCGAACAGCAACAGGCTAATGACGAACCAGAACAACAGGTAGATCCGCGAAAAGCAGCAGTCGAAGCGGCTATTGCCCGAGCAAAAgcc                                                                                                                                                 >  4:1565474/1‑150 (MQ=11)
     cAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGGGCGAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTTGCAGCGGCTATTGCCCGCGCTCAAgccc                                                                                                                                                >  6:168371/1‑149 (MQ=14)
      aGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGGGCCAAAGCGCGCAAGCTGGAACAGCTCCGCGGACATCCCGTCGCAGCACAACTCGGGCCTCAGCGGCAAGCGGCCGGCGAAGCGGCTATTGCACGACCCAAAggcgg                                                                                                                                               >  1:464064/1‑147 (MQ=2)
      aGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCAGTGGAAGCGGCTATTGCCCGCGCTAAGgcca                                                                                                                                                >  2:592705/1‑148 (MQ=14)
       ggTCGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCAGGAACAGCAACAGGCTAATGCCGAGCCAGAAAAACAGGTAGATCATCGCAAAGCCGCAGTAGCCGCCGCTATTGACAGAGCGAAAgcgaa                                                                                                                                               >  3:1558656/1‑148 (MQ=14)
           gATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCGAACGCCCGCAAGCGGGAACAGCAGCAGGATAATGCCGAGCCAGAACAGCCGGTGGATCCGCGCAACGCGGCAGTCGACGCCGCTATTGCCCGCGCGCAGGCCCGCaacc                                                                                                                                          >  7:963913/1‑149 (MQ=2)
           gATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTGGAACAGCACCAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCACAGCCGCAGTTGACGCGGCTATTGCCCGAGCGCAAGCGCACAAAc                                                                                                                                          >  1:902361/1‑151 (MQ=14)
              cctcgcAAACCCGCCGTCGAAGCCGCTATCGCCGGAGCCAAAGCACGCAAGCTGGAACAGCAACAGCCTAATGCCGACCCAGAACACCAGGGCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACggg                                                                                                                                       <  1:538138/148‑1 (MQ=14)
              ccgccgaaaCCCCCCGTCCAAGCCGCAACCGCCCGAGCCAAAGCCCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAAGAACAGGTGGATCCGCTCAAAGGCGGCGTCGAAGCCGCTTATGCCCGAGCCAAAGCGCGCAAACggg                                                                                                                                       <  1:1143230/145‑1 (MQ=14)
               cgcgCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGACGCCGCTATTGCCCGCGCCAAGGCGCGCAAAggggc                                                                                                                                      >  2:513541/1‑150 (MQ=255)
               cgcgCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGCAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACggg                                                                                                                                       >  7:888942/1‑150 (MQ=255)
                  gcAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGCGCAAAAGCCAGAAAACCGGAAc                                                                                                                                    >  4:1446003/1‑150 (MQ=14)
                  cccccccccccgccgCAGCCGCTATCGCCCGCTCCAAAGCCCGCAAGCTGGAACAGCAACAGCCTAATGCGCATGCATCCACACACGTCGTGCCCCCCAAAGCCGCCGTCGAAGCAGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACa                                                                                                                                   <  5:1144802/142‑1 (MQ=255)
                      aGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAACAACAGGTCGATCCGCGCAGAGCAGCCGTCCAAGCCGCTATTGCCCGAGCCACCGCGCGCACCCGGGAACAGCac                                                                                                                               >  5:1377356/1‑150 (MQ=14)
                             gTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCCGTCGACGCGGCTATTGCCCGCGCCCACGCCCGCAAACCGGCCCAGCAGCAGGCtt                                                                                                                        >  6:697038/1‑150 (MQ=14)
                             gTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCAGTAGAAGCCGCTATTGCCCGCGCAAAGGCCAAAAAACGCGAACAGCacaaggaa                                                                                                                         >  2:759579/1‑143 (MQ=14)
                              tCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAACGCGCGCAAACGGGAACAGCACCCGGCTa                                                                                                                        >  5:1318642/1‑150 (MQ=255)
                              ccccagccgcgcccgCCCGCGCCAAAGCTCTCAAGCTGGAACAGCAACAGGCTAATGCCGATGCTCACGAGCGCGTCGAGCCGAGAACTGCGGCCTTCCCATCCGCTATCGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTaa                                                                                                                       <  7:1325542/137‑1 (MQ=2)
                                gAAGCCGCTATTGCCCGTGCCAAAGCAAGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAAAAACAGGTAGATCAGCGCAAAGCGGCAGTAGACGCCGCTAATGCCCGAGCAAAAGCGAAAAAACACGACCAGCAACAGGATAAt                                                                                                                      >  8:1292945/1‑150 (MQ=14)
                                     cGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGACGCCGCTATTGCCCGCGCCCAAGCGCGCAAACCGGAACCGCACCCGGCTAATGccg                                                                                                                  >  7:614350/1‑147 (MQ=14)
                                     cGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGCGCGAAAGCCAGCAAACGCGACCAGCACAAGGCTaaagacgac                                                                                                                >  2:1738836/1‑144 (MQ=14)
                                       cTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCACCCGGCTAATGCGGAG‑cc                                                                                                             >  5:499762/1‑151 (MQ=255)
                                       cTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCAGTAGAAGCCGCTATTGCCCGCGCCCAAGCCCGCAAACGGGCACAGCACCACTCGAATGCGGTG‑cc                                                                                                             >  1:339080/1‑151 (MQ=14)
                                       cTATCGCCCGCGCCAAAGCGCGCAAGTTGGAACAGCAACAGGCTAATGCGGAGAGATCGGAAGAGCTCGCGGCTCGACTCGACTCCCTCGGCGCCGGTAGTGCCGGAGCCATAGCGCGCAAACTAGAACAGCAACCGGcgtgtgggggggg                                                                                                              >  6:156981/1‑139 (MQ=2)
                                       cTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCAGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAGGAGGAGCAGCACGCGGCTATGGCggcccg                                                                                                              >  1:597074/1‑147 (MQ=14)
                                        tATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGCGCCAGAAGAACAGGTCGATCCGCGCAAAGCGGCCGTCGACGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTGGACCCGCGAGCGGCtgaggccgcggcg                                                                                                             >  5:1203755/1‑139 (MQ=11)
                                        tATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAAGGGGAACAGCAACCGGCTAATGCGGAG‑cc                                                                                                             >  1:1455511/1‑150 (MQ=255)
                                         aTTGCCCCTGCGAAAGACGGCAAGCAGGAAACCCCTCAGGCCAACCGCGATCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑cc                                                                                                             <  5:1784549/149‑1 (MQ=14)
                                           tGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGACGCCGCTATTGCCCGAGCGCAAGCGAGAAAACGCGAACAGCACCCGGCTAATGCGGAG‑CCaga                                                                                                          >  3:1781149/1‑150 (MQ=17)
                                            gCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTGGATCCGCGCAAAGCCGCCGTCGCCGCGGCTATTGCCCGCGCGAACGCGCGCAAACCGGAGCACCCACCCGCGACTGCGGGG‑CAaga                                                                                                          >  2:206856/1‑149 (MQ=14)
                                            gCCCGCGCCACAGCGCGCCAGCTTGAACAGCAACCGCCTACTCCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCagaag                                                                                                        <  5:90625/151‑1 (MQ=14)
                                                gTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTAGATCCGCGCAAAGCGGCAGTAGAAGCGGCTATTGCCCGCGCAAAAGCCAAAAAACACGACCAGCAACCAGCTCATGAGCGA‑CCAGaacaac                                                                                                     >  3:1139755/1‑150 (MQ=2)
                                                        gCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGCCGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGACCAGCACCAGGCTCTTGCGGAG‑CCAGAAGACCAGGtgcct                                                                                             >  5:326434/1‑146 (MQ=14)
                                                          aCGCAAGCGGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTTGATCCCCGCAAAGCCGCCGTTGCAGCCGCTATTGCCCGCGCCCAAGCCCGCAAACCGGCACCGCAACCGGGTAATGAGGAG‑CCAGAACAACAGGTTggaaac                                                                                          >  4:1035850/1‑146 (MQ=255)
                                                            gCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCGAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGCTCcg‑cg                                                                                       >  6:341501/1‑151 (MQ=255)
                                                             cAAGCTTGAACCGCAACATTCTAATTCGGATCCAGAACTACACTACCATACGCGCATCGCAGCTGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCg‑cgc                                                                                      <  4:1237535/151‑1 (MQ=18)
                                                             cAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGCGCCAAAGCCCGCAAACGGGACCAGCAACAGGGTAATGCGGTC‑CCACAAGACCAGGTTGATCCg‑cgc                                                                                      >  1:860411/1‑151 (MQ=14)
                                                               aGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAAGAACAGGTAGATCCGCGCAAAGCGGCAGTAGAAGCCGCTATTGCCCGCGCAAAAGCGAGCAAACGGGAACAGCAACAGGATATTGACGAG‑CCAGAAGACCAGGtggctcaaccca                                                                                      >  4:1259971/1‑139 (MQ=11)
                                                                  tGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCCACGCGAGAAAAGGCGACCAGCAACAGGGTAAAGCCGAG‑CAAGAAGAACAGGtacaaaagcgaaaagc                                                                                  >  3:278436/1‑136 (MQ=14)
                                                                  tGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTGGAAGCCGCTATTGCCCGCGCGAAGGCCCGCAAACGCGAACACCAACCCGCAAAGGACGCA‑CCACAAGACAAGCTTGATCCT‑CGCAAAGc                                                                                 >  7:373135/1‑151 (MQ=9)
                                                                   ggAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTGGATCCGCGCAAAGCCGCCGTAGCCGCCGCTATTGCCCGCGCAAACGCCCGGATCCGGGCAGCGCACCTGGGAACTCCCGTG‑CCTCAGGAGCAGGTGGATCCG‑CGCACAGcg                                                                                >  5:1653556/1‑150 (MQ=2)
                                                                     caccccaacccgCTCATGCCGAACCAGAACAACATGTCGATCATCGCAAAGCCGCCGTCGAAGCCGCTATTTACCGAGTCAAAGCTCGCAATCGTGAACAGGAATCGGCTAATGCGGAT‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGc                                                                              <  4:333053/140‑1 (MQ=14)
                                                                     aaCAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCAGTAGAAGCGGCTATTGCCCGAGCAAGCAAGAGCATCCTGGAACCAAAACCGGATAAGGAGATT‑CGAGAAGAACAGGTTGCGCCG‑AGCaaaaata                                                                               >  4:754940/1‑146 (MQ=2)
                                                                      aCAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGCAGCCGCTATTGCCCGCGCCCACGCGCGCAAACGCGAACAGCACCCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTccc                                                                             >  4:447577/1‑151 (MQ=14)
                                                                           aaCAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAGCAGGATAATGCGGAG‑CAAGAAGAAGAGGTTCCTACC‑CGCAACGCtcctgt                                                                           >  7:781041/1‑143 (MQ=14)
                                                                              aGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGACCAGCACCCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCAG‑CGCAACGCTGCCGTCgccgc                                                                     >  6:740511/1‑147 (MQ=17)
                                                                              aGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCtccagtggacgc                                                                     >  7:347231/1‑140 (MQ=255)
                                                                               ggCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCTCGCAAGCGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCAGTAGAAGCg                                                                    >  4:1800406/1‑151 (MQ=255)
                                                                                  tAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTCGAAGCCGCTATTGCACGCGCCAAAGCGCGCAAGCGGGAACAGCAACCGGCTAATGCGGAT‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCAGTAGCAGCGGCt                                                                 >  8:1769509/1‑151 (MQ=14)
                                                                                     tGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCAGTGGCCGCGGCTAtt                                                              >  1:27820/1‑151 (MQ=14)
                                                                                     tGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAACGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAG‑CCCGAAGAACAGGTGGATCCG‑CGCAAAGCTGCCGTGGCAGCGGCTAtt                                                              >  6:1415744/1‑151 (MQ=14)
                                                                                      gCCGAGCCAGAACAACAGGTCGATCCGCGCAAACCCGCCGTCTAAGCCGCTATTGCCCGAGCCAACGCGCGCAAACGGTAATAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCCGTCGAAGCGGCTATTg                                                             <  3:1634302/151‑1 (MQ=255)
                                                                                       cggaaccAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTGGAACAGCAACAGACAACGGAAGAG‑CCTCGAGAACAGCAAGATACG‑AGCAAAGAGGCATTCGAAGCGTCTATGGc                                                            >  3:409362/6‑151 (MQ=0)
                                                                                       ccGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCGAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCCGTAGAAGCGGCTATTGc                                                            >  2:1288851/1‑151 (MQ=255)
                                                                                        cGAGCCACAACAACAGGTCGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACCAGAACAGCACCCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGCTCCC‑CGCAAAGCAGCCGTAGCACCGCCTATTGc                                                            >  2:1045692/1‑150 (MQ=14)
                                                                                           gCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCCGTCGAAGCGGCTATTGCAcgc                                                        >  1:1649411/1‑151 (MQ=255)
                                                                                           gCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGACAAAGCGCGCAAACGCGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGGTGATCCG‑AGCAAAGCTGCAGTCGAAGCGGCTATTGCAcgc                                                        >  1:773873/1‑151 (MQ=255)
                                                                                            ccAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGAGAAAACGGGAACAGCAACAGGCTAATGCGGAG‑CCAGAAGACCAGGTTCATCCG‑CGCAAAGCTGCAGAGGAAGAGCCTATTGCAcgcg                                                       >  6:148946/1‑151 (MQ=14)
                                                                                              aGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAGCGGGAACAGCAACAGGCTAATGCGGAG‑CCAGAAGACGAGATAGATGCG‑CGGAAGGCTGCCGTCGAAGCGGGTATGTCACGCTcc                                                     >  8:1597887/1‑151 (MQ=11)
                                                                                               gAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCCGTAGACGCGGCTATTGCACgcgcg                                                     >  3:613792/1‑149 (MQ=255)
                                                                                                ccccccaGGCCGATCCCCGCAAACCTGCCTTTGAAGCAGCTATAGCCCGCGCCAAAGCGCGCAACCGGGAACAGCAACAGGCTAATGCGGAT‑CCAGATCAACAGGTTGATCCG‑CGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCaa                                                   <  5:13965/146‑1 (MQ=11)
                                                                                                aacaacAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CAAGAAGAACAGGTAGATCCG‑CGCAAAGCTGCAGTAGCCGCGGCTATTGCCcgcgacc                                                    >  3:1810000/1‑147 (MQ=14)
                                                                                                 agaacaGGTCGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGAGCAAAAGCAATAAAACAGGAACAGCACAAGGATAATACCGAA‑CCATAACAACAGGTAGATCAT‑CAAAAAGCTGAAGTGGAAGAGGCTATTCCAAgcgcaac                                                   >  4:1060640/3‑147 (MQ=2)
                                                                                                  caacaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCagaaga                                                                                                       <  7:1171104/98‑1 (MQ=255)
                                                                                                  caacaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCCGTCGACGCGGCTATTGCCCGCGCCaacg                                                 >  7:1591717/1‑149 (MQ=255)
                                                                                                    acaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCAG‑CGCAAAGCTGCAGTAGACGCGGCTATTGCACGCGCAAAAGc                                                >  8:309386/1‑150 (MQ=14)
                                                                                                     cctccccccccGCGCAAAGCCGCCGTCGAATCCTCTATTGATCGTGCCACACCGCTCAACTTGTAACACCAATAGTCTAATGCGGAT‑CCAGACGATCATGCGCACTCG‑CGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCAc                                              <  3:896149/142‑1 (MQ=255)
                                                                                                     caGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCa                                               >  1:209759/1‑150 (MQ=255)
                                                                                                       ggTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCCGTCGCAGCGGCTATTGCACGCGCCAAAGCACGc                                            >  2:1317983/1‑151 (MQ=255)
                                                                                                        gTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCCCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCAGTAGAAGCGGCTATTGCACGCGCTAAGGCaaga                                            >  2:1235529/1‑147 (MQ=17)
                                                                                                        cgcccgccccgcaccgccgccGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAACCGGGAACAGCAAGCCGGTACTGGCGAT‑CCAGACGCAGAGGTTGATCGG‑CGCAAAGCCGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCa                                           <  5:950383/136‑1 (MQ=14)
                                                                                                         tCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAagcaagca                                           >  5:1589137/1‑150 (MQ=255)
                                                                                                          cgcgccGCGCAAAGCCTCCGTCGAAGCCGCTATTGCCCGCCCCTACGCCGGCCTGAGTGCAGAGCAGACGTGTTATGTTCAG‑ACATAACAACAGGTCGATCCG‑CGCAAAGCTGCTGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAg                                         <  6:567563/147‑1 (MQ=9)
                                                                                                           gATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAGCGGGAACAGCAACAGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCAGTCGACGCGGCTAATGCACGCGCAAAGGCACGCAAGc                                        >  4:980967/1‑151 (MQ=14)
                                                                                                           gATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAACGCACGCAAGc                                        >  6:922946/1‑151 (MQ=255)
                                                                                                            cccccccccccgccgccGTCGAAGCCGCTATTGCCCGAGCCAAACCGCGCAAACCCGAACAGGCACCGGATTTACTGGAGTGCCGACG‑TGA‑GCTCTTCCGTCGTAAAGCGGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCt                                       <  5:838138/140‑1 (MQ=9)
                                                                                                            aTCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCGGCCGTCGACGCGGCTATTGCACGCGCAAAGGccagaaagcg                                       >  2:918344/1‑142 (MQ=17)
                                                                                                              ccGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCAGTAGCAGCGGCTATTGCACGCGCAAACGCaataaagcagg                                     >  3:1087373/1‑141 (MQ=17)
                                                                                                                  gcAAAGCCGCCGTCGAAGCCGCTATTTCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCCGCTAATGCGGAG‑CCAGAAGAACAGGTTGATACG‑CGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGccacaaagcgcgacc                                  >  7:1056415/1‑136 (MQ=17)
                                                                                                                  gcAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACa                                                                                                    <  6:1152101/85‑1 (MQ=255)
                                                                                                                  gcAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACa                                 <  2:410705/151‑1 (MQ=255)
                                                                                                                   cAAACCCCCCGCCGCAGCCCCTATTGCCCGAGCCAAAGCGCTCAATATTTAACAGCAACAGGCTAATGCGGAT‑CCATAAGAACAGGTGGATCCG‑CGCAAAGCTGCCGTCGAAGAGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAg                                <  2:1205118/151‑1 (MQ=11)
                                                                                                                    aaaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCAGTCGAAGCGGCTATTGCCCGCGCGAAAGCACGCAAGCTGGCACAGc                               >  6:507017/1‑151 (MQ=255)
                                                                                                                          gccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAgg                         >  1:1616229/1‑151 (MQ=255)
                                                                                                                            cgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCGAAAGCACGCAAGCTGGACCAGCACCAGGCt                       >  7:1548957/1‑151 (MQ=255)
                                                                                                                             gTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCGAAAGCACGCAAGCTGGAACAGCACCAGGCt                       >  7:1821778/1‑150 (MQ=255)
                                                                                                                              tctaatcccatATTGCACGAGCCACAGCTCGAATATTGGAAAATCAATTTGCTAATTCGTAG‑CTATTACTATATGTTGATCCG‑CGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTa                      <  2:1510156/140‑1 (MQ=9)
                                                                                                                               cGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCCGTCGACGCGGCTATTGCACGCGCCAAAGCCCGCAAGCTGGAACAGCACCAGGCTCAt                    >  1:1370297/1‑151 (MQ=255)
                                                                                                                                gcaGCCGCTCGTGCCCGAGCCAAAGCTCGCAAGCTGGACCAGCAACCGGCTATTGCGGAG‑ACAGACGACCCGGGCGAGCCG‑CGCAAAGCGGCGGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATg                   <  5:431821/149‑1 (MQ=11)
                                                                                                                                gcaGCCGCTAGACCCCGAGCCAAAGCGAGCAAGCTGGACCAGCAACCGGCTAATGTGGTG‑AGTGAATCTCATTGTGAGCCG‑GGCTAAGCCGCCGTCGAAGCCGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATg                   <  6:827277/149‑1 (MQ=2)
                                                                                                                                gAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAg                                                                                                                <  8:1325448/60‑1 (MQ=255)
                                                                                                                                gAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGACCAGCACCAGGCTAATg                   >  2:272189/1‑151 (MQ=255)
                                                                                                                                 aaGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATCCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCAGTAGAAGCGGCTATTGCCCGAGCAAAAGCCCAAAAGCACGAACAGCAACAGGATaaac                   >  8:700202/1‑148 (MQ=18)
                                                                                                                                       cTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTAcc            >  1:694343/1‑151 (MQ=255)
                                                                                                                                            gCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGATCAGGTTGATCCG‑CGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCaga         >  5:1459340/1‑149 (MQ=255)
                                                                                                                                              ccGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCAAAAGCACGCAAGCACGAACAGCAACAGGCTAATGAGCTACCagaaga      >  3:795188/1‑150 (MQ=255)
                                                                                                                                                 aGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCCGTCGAAGCGGCTATTGCCCGCGCCAACGCACGCAAGCAGGCACAGCACCAGGCTAATCCGGAGCCagaagatctg  >  1:1090854/1‑147 (MQ=25)
                                                                                                                                                 |                                                                                                                                                        
AAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAG  >  NC_000913/1708756‑1709051

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑