Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,708,9300CA25.9% 448.1 / 65.2 271P671Q (CCG→CAG) rsxCSoxR iron‑sulfur cluster reduction factor component; putative membrane‑associated NADH oxidoreductase of electron transport complex
Reads supporting (aligned to +/- strand):  ref base C (145/52);  new base A (55/14);  total (201/70)
Fisher's exact test for biased strand distribution p-value = 3.36e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 272 total aligned reads displayed.

GCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGC  >  NC_000913/1708782‑1709080
                                                                                                                                                    |                                                                                                                                                        
   gTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCCGTCGCCGCGGCTATTGCCCGCGCGAACGCGCGCAACCCGGCCCAGCGACCGGCtc                                                                                                                                                     >  6:51841/1‑150 (MQ=14)
   gTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCGAAAGCGCGAAAACCGGACCAGCACCAGGCt                                                                                                                                                      >  1:447461/1‑150 (MQ=14)
    tCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAACGCGCGCAAACGGGAACAGCACCCGGCTa                                                                                                                                                     >  5:1318642/1‑150 (MQ=255)
     cccccccGCTATCGCCCGAGCCAAAGCTAGCAATCTTGAACAGCAACAGGCTAATGCCGACCCAGAACAACAGGTCGATCCGCTCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAAt                                                                                                                                                   <  2:1629631/146‑1 (MQ=14)
     cGAAGCCGCTAATGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGACGCCGCTATTGCCCGCGCAAACGCCAGAAAACGCGCACAGCAACAGGCTaa                                                                                                                                                    >  4:1044077/1‑150 (MQ=14)
      gAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGCCGCGGCTATTGCCCGCGCCAACGCCCGCAAACCGGAACAGCACCCGGCTAATg                                                                                                                                                  >  6:733978/1‑151 (MQ=14)
        aGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGCCGCCGCTATTGCCCGCGCCCACGCGCCCAAACGCGACCAGCAACCGGGTAATGCg                                                                                                                                                >  5:964338/1‑151 (MQ=17)
         gCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCgg                                                                                                                                               >  5:419161/1‑151 (MQ=255)
            gCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAAGAACAGGTAGATCCGCGCAAAGCGGGCGGAGCAGCCGCGATGTCACCAGCCGTACCTCGCCAGCGGGGACCGCAACCGGCTAATGCGGAG‑c                                                                                                                                           >  1:559207/1‑151 (MQ=9)
             cTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCACCCGGCTAATGCGGAG‑cc                                                                                                                                          >  5:499762/1‑151 (MQ=255)
             cTATCGCCCGCGCCAAAGCGCGCAAGTTGGAACAGCAACAGGCTAATGCGGAGAGATCGGAAGAGCTCGCGGCTCGACTCGACTCCCTCGGCGCCGGTAGTGCCGGAGCCATAGCGCGCAAACTAGAACAGCAACCGGcgtgtgggggggg                                                                                                                                           >  6:156981/1‑139 (MQ=2)
              tATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAAGGGGAACAGCAACCGGCTAATGCGGAG‑cc                                                                                                                                          >  1:1455511/1‑150 (MQ=255)
              tATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCAAATCCGAAGACAGAACAGGAGGTAAATCCTCTAAACGAATCAGTAGAAGACGCTATTGCCCGAGACAAATAAAGAAAACGGGAACCGCAGCCgggggctggggagcgg                                                                                                                                          >  2:1388480/1‑137 (MQ=9)
               aTTGCCCGTTCCAAAGCACGCAAGATGAAACACCAACTCTCTAATGCGGATCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑cc                                                                                                                                          <  2:1027973/149‑1 (MQ=14)
               aTTGCCCCTGCGAAAGACGGCAAGCAGGAAACCCCTCAGGCCAACCGCGATCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑cc                                                                                                                                          <  5:1784549/149‑1 (MQ=14)
                 tGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGACGCCGCTATTGCCCGAGCGCAAGCGAGAAAACGCGAACAGCACCCGGCTAATGCGGAG‑CCaga                                                                                                                                       >  3:1781149/1‑150 (MQ=17)
                 tGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGAAGCGGCTATTGACCGCGCACAAGCCAGAAAACGCGACCAGCACCAGGCTAATACCGAG‑caata                                                                                                                                       >  2:273158/1‑146 (MQ=14)
                           aaaGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCAGTAGACGCAGCTATTAAGAGCGACCAAGAGCGAAAGAGGGTACAGCAAACGGATAATGACGGG‑GCAGAACAAAAGGttt                                                                                                                            >  8:1138382/1‑150 (MQ=2)
                            aaGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTAGACGCCGCTATTGCCCGCGCGCACGCCCGCAAACGCGCCCAAGAACCGACTAGCGACGAG‑GCAGGAGAGCAGGtagc                                                                                                                           >  8:282839/1‑148 (MQ=9)
                              gCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGCGCAAAAGCCAAAAAACGAGAACAGAAAACCGAGAATGAGGGA‑AAAGAAGAACAGGTTGATc                                                                                                                         >  4:898971/1‑151 (MQ=9)
                                agcgaaccTGGAACACCAACAGGCAACTCCCGACCCAGAACAACTTGTCGATCCACGCAAAGCAGCCGTTGAAGCAGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCcg                                                                                                                       <  8:564954/144‑1 (MQ=18)
                                  gCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCGAACGCGCGCAAACGCGAACAGCACCAGGCTATTGCGGAG‑CCAGAAGACCAGGTGGATccccc                                                                                                                     >  5:1711418/1‑148 (MQ=14)
                                   cAAGCTTGAACCGCAACATTCTAATTCGGATCCAGAACTACACTACCATACGCGCATCGCAGCTGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCg‑cgc                                                                                                                   <  4:1237535/151‑1 (MQ=18)
                                        tGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCCGTCGAAGCCGCTATTGCCCGCGCCAACGCGCGCAAACCGGAACAGCACACGGCTTATGCGGAG‑GCAGAAGACCACGTTGCTCCG‑CGCACAGc                                                                                                              >  7:95458/1‑151 (MQ=14)
                                        tGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGACGCCGCTATTGCCCGCGCCAAAGCCCGCAAACGGGAACAGCAACAGGCTAATGCGGAG‑CCAGAAGAACAGGTCGATCAG‑CGCaaccc                                                                                                              >  7:681447/1‑148 (MQ=11)
                                         ggAACAGCAACAGGCTAATTATGATACAGAAAACCAGTTCGATCCGAGCAAATCTTTCGTCTAATCTGTTATTGTACTAGACTATGTTCGGATCTTGTAACAGCAACAGGCTAATGCGGAT‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCt                                                                                                             <  8:1796200/151‑1 (MQ=2)
                                             cAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGACGCCGCTATTGCCCGCGCCAACGCGCGCAAACGCGAACAGCACCAGGCTCATGCGGAG‑CCAGAAGAACAGGTGGCTCCG‑CGCACAGCGGCCg                                                                                                         >  5:257912/1‑151 (MQ=14)
                                              aGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGCACAGGTTGATCCG‑CGCAAAGCTGCCGt                                                                                                        >  1:1632121/1‑151 (MQ=255)
                                                 aaCAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCAAAAGCCCGAAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGACCAGGTTGATACG‑CGAAAAGCTGCAGtagc                                                                                                     >  1:898683/1‑148 (MQ=17)
                                                    aGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCtccagtggacgc                                                                                                  >  7:347231/1‑140 (MQ=255)
                                                     ggCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCTCGCAAGCGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCAGTAGAAGCg                                                                                                 >  4:1800406/1‑151 (MQ=255)
                                                           tGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAACGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAG‑CCCGAAGAACAGGTGGATCCG‑CGCAAAGCTGCCGTGGCAGCGGCTAtt                                                                                           >  6:1415744/1‑151 (MQ=14)
                                                              cGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCACCCGGCTAATGCGGAG‑CCAGAAGAACAGGTGGATCCG‑CGCACAGCTGCCGTCGCAGCGGCTATTGcc                                                                                        >  1:1301021/1‑150 (MQ=255)
                                                              cGAGCCACAACAACAGGTCGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACCAGAACAGCACCCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGCTCCC‑CGCAAAGCAGCCGTAGCACCGCCTATTGc                                                                                         >  2:1045692/1‑150 (MQ=14)
                                                                 gCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCCGTCGAAGCGGCTATTGCAcgc                                                                                     >  1:1649411/1‑151 (MQ=255)
                                                                  ccAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGAGAAAACGGGAACAGCAACAGGCTAATGCGGAG‑CCAGAAGACCAGGTTCATCCG‑CGCAAAGCTGCAGAGGAAGAGCCTATTGCAcgcg                                                                                    >  6:148946/1‑151 (MQ=14)
                                                                    aGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCGGCAGTAGCCGCGGCTATTGCCCGCGcc                                                                                  >  8:829034/1‑151 (MQ=14)
                                                                      ccccccaGGCCGATCCCCGCAAACCTGCCTTTGAAGCAGCTATAGCCCGCGCCAAAGCGCGCAACCGGGAACAGCAACAGGCTAATGCGGAT‑CCAGATCAACAGGTTGATCCG‑CGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCaa                                                                                <  5:13965/146‑1 (MQ=11)
                                                                      aactacAGGTCGATCCGCGCAAATTCTCTTTCGAAGCCGCTATTGCCCGAGCCAAAGCTCTCAACCTTGAAGATTAACCTGCTATTGGGGAT‑TCAGATGAACAGGTCGATCCG‑CGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCaa                                                                                <  2:20582/151‑1 (MQ=9)
                                                                      aacaacAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CAAGAAGAACAGGTAGATCCG‑CGCAAAGCTGCAGTAGCCGCGGCTATTGCCcgcgacc                                                                                 >  3:1810000/1‑147 (MQ=14)
                                                                       acaacaGGTCGATCCGCGCAAAGCAGCCGTCGAAGCAGATATTAACCGAGACAAAGAGCGAAAGAGGGAACACAAAAAGGCTAATGCCGAT‑CCAGAACAAAACATTAAAAAA‑AGCAAAGCGGCCGTCGAAGCAGCtggggcgcggggcgtg                                                                               >  2:1308864/1‑136 (MQ=2)
                                                                        caacaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCagaaga                                                                                                                                    <  7:1171104/98‑1 (MQ=255)
                                                                        caacaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCCGTCGACGCGGCTATTGCCCGCGCCaacg                                                                              >  7:1591717/1‑149 (MQ=255)
                                                                          acaGGTCGATCCGCGCAAAGCAGCCGTAGAAGCGGCTATTGCCCGCGCCAAAGCCAGCAAACTGGACCAGCAACAGGATAAATCCGAC‑CCATAAAAACAAGTATATACT‑CCAAAATCGGCTGTTTCATCGGCAATTGCACGCGCaaatga                                                                             >  8:1555911/1‑147 (MQ=2)
                                                                           caGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCa                                                                            >  1:209759/1‑150 (MQ=255)
                                                                               tCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAagcaagca                                                                        >  5:1589137/1‑150 (MQ=255)
                                                                                cccgccccgcAAAGCCGCCGTCGAAGCCTCTATTGCCCGAGCCAAAGCGCGCAACCGGGAACAGCAAGCTGCTAATGCCGAT‑CCACAAGAACAGCTTGATCCC‑CGCAAAGCCGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCa                                                                        <  5:941829/142‑1 (MQ=255)
                                                                                  cccccccccccgccgccGTCGAAGCCGCTATTGCCCGAGCCAAACCGCGCAAACCCGAACAGGCACCGGATTTACTGGAGTGCCGACG‑TGA‑GCTCTTCCGTCGTAAAGCGGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCt                                                                    <  5:838138/140‑1 (MQ=9)
                                                                                   ccccccccccgccgccTGCGAACCCGCTAGCGCCCGCGCCAAAGCTCGCAATCGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAACAACAGGTGGCTCCC‑CTCAAATCATCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTg                                                                   <  7:850455/141‑1 (MQ=255)
                                                                                    ccGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCCGTAGAAGCGGCTATTGCACGCGCCAAAGCACGCaaccagg                                                                  >  3:1563106/1‑146 (MQ=255)
                                                                                      gcgcAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCGAAAGCCCGCAAGCTGGac                                                                >  6:294583/1‑150 (MQ=255)
                                                                                      gcgcAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCCCGCAAACGGGAACAGCAACAGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCAG‑CGCAAAGCTGCAGTAGCAGAGGCTATTGCACGCGCGAAAGCACGAAACCAGGa                                                                 >  3:1097737/1‑150 (MQ=17)
                                                                                        gcAAAGCCGCCGTCGAAGCCGCTATTTCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCCGCTAATGCGGAG‑CCAGAAGAACAGGTTGATACG‑CGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGccacaaagcgcgacc                                                               >  7:1056415/1‑136 (MQ=17)
                                                                                        gcAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAACTGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACa                                                                                                                                 >  4:1158400/1‑85 (MQ=16)
                                                                                         cAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACTCAAGCTGGCAc                                                               >  7:363411/1‑149 (MQ=255)
                                                                                         cAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCCGTAGAAGCGGCTATTGCACGCGCGCACGCCCGCAAGCgggccc                                                               >  2:1266097/1‑146 (MQ=17)
                                                                                         cAAACCCCCCGCCGCAGCCCCTATTGCCCGAGCCAAAGCGCTCAATATTTAACAGCAACAGGCTAATGCGGAT‑CCATAAGAACAGGTGGATCCG‑CGCAAAGCTGCCGTCGAAGAGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAg                                                             <  2:1205118/151‑1 (MQ=11)
                                                                                          aaaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGc                                                            >  5:1294610/1‑151 (MQ=255)
                                                                                              cctccgTGGACGCCCCTATTGCCCGAGCCTAAGCGCGCAATCTGTAACTGCAACCGGCTGATGCGGAT‑CCAGAAGAAGAGGTTGATCCG‑CGCAAAGCTGCGGTCGAAGGGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACa                                                        <  3:214076/148‑1 (MQ=14)
                                                                                              ccgccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCAGTAGCAGCGGCTATTGCACGCGCGCAAGCCAGAAAGCTGGAACAGCacc                                                         >  4:1024860/1‑148 (MQ=17)
                                                                                               cgccgGCGAAGCCTCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACGGGATAATGCTGAT‑GAAGAAGAACATTGGGATCCG‑CGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAg                                                       <  6:615803/151‑1 (MQ=14)
                                                                                                gccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAgg                                                      >  1:1616229/1‑151 (MQ=255)
                                                                                                gccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACCGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGATGATCCG‑CGCAAAGCTGCAGTAGAAGCGGCTATTGCACGCCCAAAAGCACCCAAACACGAACAGCAACAgg                                                      >  4:351758/1‑151 (MQ=17)
                                                                                                  cgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCGAAAGCACGCAAGCTGGACCAGCACCAGGCt                                                    >  7:1548957/1‑151 (MQ=255)
                                                                                                   gTCGAAGCATATATTTACCGATACACAGCCCTCAAACTTGAACAGAAACCCGCTAATTCTTAG‑CCAGAAGTACTCTGTTATGAT‑CTCAAAGCCGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTa                                                   <  2:955681/151‑1 (MQ=2)
                                                                                                      gcaGCCGCTAGACCCCGAGCCAAAGCGAGCAAGCTGGACCAGCAACCGGCTAATGTGGTG‑AGTGAATCTCATTGTGAGCCG‑GGCTAAGCCGCCGTCGAAGCCGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATg                                                <  6:827277/149‑1 (MQ=2)
                                                                                                      gAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAg                                                                                                                                             <  8:1325448/60‑1 (MQ=255)
                                                                                                       cccccgcccgagCCCGAGCCAAAGCGCGCAAACTGGAACAGCAACAGGCTAATCCGGAG‑CCAGAAGAACAGGTGGATCCG‑CGCAAAGCTGCCGTCGAACCCGCTATTGCACGAGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGc                                               <  2:707385/140‑1 (MQ=11)
                                                                                                       aaGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAACGCACGCAAGCTCGAACAGCAACAGGCTAATGc                                               >  3:507179/1‑151 (MQ=255)
                                                                                                       aaGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCAGTAGAAGCGGCTATTGCACGCGCCAACGCACGCAAGCGGGCACAGCAGCAGGCTAATGc                                               >  4:677543/1‑151 (MQ=25)
                                                                                                        cgCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAT‑CCAGAAGAACGCCGTGATCGC‑CTCACAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCg                                              <  6:12678/150‑1 (MQ=17)
                                                                                                            gCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCCCGCAAGCTGGAACAGCAACAGGCTAATGCGGTAc                                          >  7:1258661/1‑151 (MQ=255)
                                                                                                            gCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCAGTGGAAGCGCCTATTGCACTCGCGAAAGCACGCAAGCGTGAACAGCACCAGGGTatagccgtgc                                          >  1:694241/1‑142 (MQ=21)
                                                                                                              tATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCCGTCGCCGCGGCTATTGCCCGCGCCAAAGCCCGCAAGCTGGAACAGCAGCAGGCTAATGCGGTcccc                                        >  3:362425/1‑150 (MQ=21)
                                                                                                                 tGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAACGCCACAAAGCTGGCACAGCAACAGGCTATTGCGGTACCaga                                      >  1:295232/1‑150 (MQ=25)
                                                                                                                  gCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCaga                                      >  1:73207/1‑149 (MQ=255)
                                                                                                                    ccGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCAAAAGCACGCAAGCACGAACAGCAACAGGCTAATGAGCTACCagaaga                                   >  3:795188/1‑150 (MQ=255)
                                                                                                                     cgttcctaaGCTCGCAAACGGGCACAGCAACCGGCTAATCCTTAG‑CCAGAAGAACAGCTCGATACG‑AGCATAGCCGGCGGCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAAc                                 <  3:1146158/144‑1 (MQ=17)
                                                                                                                     cGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCCGTCGAAGCGGCTATTGCCCGCGCCAAAGCACGCAAGCTCGAACAGCATCAGGCTAATCCCGAACCAGAAGAAc                                 >  8:161363/1‑151 (MQ=25)
                                                                                                                       aGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCCGTCGAAGCGGCTATTGCCCGCGCCAACGCACGCAAGCAGGCACAGCACCAGGCTAATCCGGAGCCagaagatctg                               >  1:1090854/1‑147 (MQ=25)
                                                                                                                         ccAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCACCAGGCTAATCCGGTACCAGAAGAACACGt                             >  2:793973/1‑151 (MQ=255)
                                                                                                                          cAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCGAAAGCACGCAAGCAGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGtt                            >  2:456700/1‑151 (MQ=255)
                                                                                                                              gcgcgcAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAAGCCGTACCAGAAGAACAGGtacat                         >  2:198218/1‑146 (MQ=255)
                                                                                                                                 cccaaccccgacccgCAACCGCCCAATGCGGAC‑CCAGAAGAAGTTTTTTATCAT‑CTCAATGCTCCCTTCGATTTGTCTATTTTACGCTACAATGTTCGCAATCTGGAAGATCATCAGCTTTATGCGGTACCAGAAGAACAGGTTGATCcgc                     <  4:1708918/137‑1 (MQ=255)
                                                                                                                                  gcAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCCGTCGACGCGGCTATTGCACGCGCCAACGCACGCAAGCTGGAACAGCACCAGGCTAATGCGGTACCAGAAGAACAGGTTGCTCcgcg                    >  6:764341/1‑151 (MQ=255)
                                                                                                                                    caccGGCAACAGCAACCGTCTATTGCGGAG‑CCAGAAGAACAGGTTGATCCG‑AGCAAAGCTGCGGTCGCCTGGTCTAACGGTCGCGCCAAAGCTCTCAACCGGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCa                  <  7:23900/148‑1 (MQ=17)
                                                                                                                                    aaaCGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGCTCCgcgc                   >  4:1440088/1‑150 (MQ=255)
                                                                                                                                    aaaCGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCgcgc                   >  7:1659199/1‑150 (MQ=255)
                                                                                                                                    aaaCGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTCGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCgcgc                   >  8:304133/1‑150 (MQ=255)
                                                                                                                                       cGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCaa                 >  4:1261842/1‑149 (MQ=255)
                                                                                                                                         ggAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGACCAGGTTGATCCGCGCAAAGCg             >  6:49514/1‑151 (MQ=255)
                                                                                                                                          gAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGGTGGAACAGCACCAGGCTAATGCGGTCGCAGAAGAACAGGTTGATCCGCGCAAAGCgg            >  1:800485/1‑151 (MQ=255)
                                                                                                                                           aaCAGCATCCGGCTAATGCGGAT‑CCAGAAGAACAGGTTGATCTT‑CGGAATGCTGCCGTCTAAGAGTCTATTGCACTCGCCAAATCACGCAAGCTTGAAGAGGAACTTGCTAATTCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGc           <  3:1760516/151‑1 (MQ=18)
                                                                                                                                           aaCAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCAGCGCAAAGCGGc           >  4:453341/1‑151 (MQ=255)
                                                                                                                                             cAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAACTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGAGGCat         >  3:89759/1‑150 (MQ=255)
                                                                                                                                              aGCAACCGGCTACTGCCGAC‑CCAGAAGCACCGGAGGCTCCG‑GTGTAAGCAGCTGTCGTATCGGGTATTGCCCGCGCCAAAGCTCGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGt        <  7:545890/151‑1 (MQ=14)
                                                                                                                                              aGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGC‑GTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGtt       >  5:605961/1‑151 (MQ=255)
                                                                                                                                               gCAACCGGCTAATGCGGAG‑CCAGGCGCAGAGGGGCCTGCG‑CGCCTCGCCGCCTGCGAAGCGGCTATTGCCCGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGtt       <  7:1469395/151‑1 (MQ=17)
                                                                                                                                               gCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCAAAAGCACGAAAGCTGGAACAGCAACAGGCTAATGAGGTACCAGAAGAACAGGTTTATCCGCGCAAAGCGGGAGtt       >  3:623679/1‑151 (MQ=255)
                                                                                                                                                ccaCCGGCACATCCGGAC‑CCAGAAGAACAGGTCGATCCG‑CGCAAAGCGGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTg      <  5:1085650/149‑1 (MQ=17)
                                                                                                                                                    |                                                                                                                                                        
GCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAG‑CCAGAAGAACAGGTTGATCCG‑CGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGC  >  NC_000913/1708782‑1709080

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑