Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,818,1580TA23.2% 336.4 / 80.5 204intergenic (‑23/+40)argZ/argYtRNA‑Arg/tRNA‑Arg
Reads supporting (aligned to +/- strand):  ref base T (70/86);  new base A (17/30);  total (87/117)
Fisher's exact test for biased strand distribution p-value = 3.17e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 223 total aligned reads displayed.

TAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCG‑GTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTT  >  NC_000913/2818009‑2818305
                                                                                                                                                      |                                                                                                                                                      
tAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTActgct                                                                                                                                                        <  8:1374305/150‑1 (MQ=255)
 aaTTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTActgctg                                                                                                                                                       >  5:826550/1‑150 (MQ=255)
 aaTTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGAGACGCGACTACCACCCGTCTGTACTGAGCGCAGTACTCTGAAGAGCTGAGGTACGGATGCATCGGG‑AAAATTAATTTActgctgg                                                                                                                                                      >  7:709572/1‑150 (MQ=9)
  aTTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTAGTTTACTGCTGa‑‑t                                                                                                                                                   >  6:1361439/1‑151 (MQ=255)
    tCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGa‑‑ta                                                                                                                                                  <  5:1545918/150‑1 (MQ=255)
    tCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGa‑‑ta                                                                                                                                                  <  6:280789/150‑1 (MQ=255)
     ccGCTACCTCTTCTATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TAtt                                                                                                                                                <  2:433191/151‑1 (MQ=255)
      cGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTg                                                                                                                                               <  3:921968/151‑1 (MQ=255)
        gtagctctTCGATACCTTCATTGCTGAATATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAACTTACTTTACTGCAGA‑‑ttttt                                                                                                                                               <  8:1452397/145‑2 (MQ=11)
         tACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAAGTTACTTTACTGCAGA‑‑TAttttt                                                                                                                                             >  7:1228161/1‑147 (MQ=255)
          aCCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGTTTCATCCGTGAGGATTCGAACCTCCGACCTCTCTGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGT‑AAATTTATTTTACTGCTGA‑‑TATTGAt                                                                                                                                             <  2:402021/149‑1 (MQ=14)
          aCCTCTCCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAACTTAGTTTACTGCAGA‑‑TAATgtgcg                                                                                                                                           >  1:1828123/1‑147 (MQ=14)
            ctctTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATAccc                                                                                                                                         >  5:103717/1‑150 (MQ=255)
            ctctTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTAGTTTACTGCTGA‑‑TAtttagatcc                                                                                                                                         >  7:1363325/1‑144 (MQ=255)
              ctTCGATACCTTCATTGCTGAAGGTTACGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTActgct                                                                                                                                                        <  5:1474088/136‑1 (MQ=18)
              ctTCGATACCTTCATTGCTGAAGGTTACGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATATATTTTAATGCAGa‑‑gataggaagagcc                                                                                                                                       >  4:32627/1‑141 (MQ=11)
              ctTCGATACCTTCATTGCTGAAGCTTACGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTActgctg                                                                                                                                                       <  6:32741/137‑1 (MQ=25)
               ttCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAAGTTAGTTTACTGCAGA‑‑TAtttttatagct                                                                                                                                       >  7:834887/1‑141 (MQ=14)
                tCGATCCGTTCATAGCTGAAGATTTCGGAGCATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAACTTACTTTACTGCAGA‑‑ttttttgatacc                                                                                                                                        <  6:394191/148‑9 (MQ=11)
                tCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCAATCCAGCTGAGCTACGGATGAATCGGG‑AAAATTAATTTACTGCAGA‑‑TATTtataaagata                                                                                                                                      >  2:1043947/1‑144 (MQ=11)
                 cGATACCTTCATTGCTGAAGTTTACGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTActgct                                                                                                                                                        <  8:1405060/133‑1 (MQ=25)
                 cGATACCTTCATTGCTGAAGGTTACGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATATATTTAAATGCTTA‑‑TATTTATAACGcaaa                                                                                                                                     >  3:1515182/1‑147 (MQ=11)
                 cGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGctact                                                                                                                                    <  4:1213929/151‑1 (MQ=255)
                  gATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAAGTTAATTTACTGCAGA‑‑TAttttgaaaccgaga                                                                                                                                    >  3:250944/1‑138 (MQ=14)
                   aaaCCTTCATTCCGGAATATCTCGGATCATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAACTTACTTTACTGCAGATTTTTTGATACCGctact                                                                                                                                    <  3:995542/149‑1 (MQ=14)
                    tACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAAATTAATTTACTGCAGA‑‑TAtttttaaacctaataa                                                                                                                                  >  2:1222745/1‑136 (MQ=11)
                     aCCTTCATTGGTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTAGAACCTACGACCCAACCGTTCGTAGCCGAGTAGTAAATACAGCTGAGCTACGGATGCATAGGG‑AAATTTACTTTACTGCTGA‑‑TATTGAGACAGCTATTaaat                                                                                                                                >  5:986874/1‑150 (MQ=14)
                     aCCTTCATTGCTGAAGTTTACGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAg                                                                                                                                <  1:1512886/151‑1 (MQ=25)
                       cTTCATTGCTGAAGTTTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGcta                                                                                                                                      <  8:272483/143‑1 (MQ=255)
                       cTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTAATTTACTGCTGA‑‑TATTTATAACGCTAGTAAAGcc                                                                                                                              >  2:730007/1‑151 (MQ=255)
                        gtaaTTGATGAATATTTCGTACAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGc                                                                                                                               <  5:1221328/148‑1 (MQ=14)
                         tCATTGCTGAAGTTTACGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCa                                                                                                                             <  5:1355724/150‑1 (MQ=255)
                          cATTGCTGAAGGTTACGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TAtt                                                                                                                                                <  7:881134/130‑1 (MQ=18)
                          cATTGCTGAAGGTTACGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTAATTTACTGCTGA‑‑TAtt                                                                                                                                                >  8:884151/1‑130 (MQ=255)
                          cATTGCTGAAGATTTCCGAGAATAAGGTGCATCCGGGAGGATTCGAACCTTCTATCTTTCGGTTCGTAGCCGATTACTCTATACACCTTAGCCACTGATGCATCGGG‑AAATTTAATTTACTGCTCA‑‑TATTGATACCGCTACTAAAGCCa                                                                                                                             <  4:1822283/149‑1 (MQ=14)
                          aatttatGAATATTTAGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGcc                                                                                                                              <  8:838051/144‑1 (MQ=14)
                           aTTGCTGAAGATTACGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTCAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCatat                                                                                                                          <  7:342330/151‑1 (MQ=255)
                             gccTGAAGATCTCTGCGCATATGGTGCATCCGGGAGGATTCGAACCTAGGTTTTATTTGTTCCTAGGCGTGTACTCTATCGATCTTATCTAGGGATGCATGTTT‑AAATTTATTTTACTGTTGA‑‑TATTGATACCGCTACTAAAGCCATATCa                                                                                                                        <  2:893987/149‑1 (MQ=9)
                              caggaatatcacGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATc                                                                                                                         <  1:272981/140‑1 (MQ=14)
                                ggattcgttggtagaATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCAAGt                                                                                                                     <  5:434533/139‑1 (MQ=255)
                                gcaaGATTTCGTACTATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCaa                                                                                                                       <  6:577032/149‑1 (MQ=14)
                                 gAAGATTTCCGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCAAg                                                                                                                      <  8:817111/149‑1 (MQ=255)
                                    gATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAaga                                                                                                                 <  3:36385/151‑1 (MQ=255)
                                     aTTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAagag                                                                                                                <  4:1201954/151‑1 (MQ=255)
                                        acGGATAATATGGTGCATCCGGGAGTATTCTAACCTCCGACCGCTCGTTTCGTAGCCTATTACTATATCCAGCTTAGCTACGTATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATg                                                                                                             <  7:1244585/150‑1 (MQ=14)
                                         cGGCGAATATGGGGCTTGGGGCCGGATTCGATGCTGTGAACGCTGGGGTGGTAGCCTAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATgg                                                                                                            <  5:713279/151‑1 (MQ=14)
                                             taaTTTGGTGAATCCGGGAGGATTCTAACCTCCGACCGCTCTGTTCGTTGCCTAGTACTCTATCAAGCTTTGCTAGGTATGCATGGGT‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGc                                                                                                         <  2:1575917/149‑1 (MQ=11)
                                                 atggcccATCCGGGCCCATTCCACCCTCCGCCCGCTCGGTTCTTATAATATTACTCTCTCCACCTGATCTACTCATGTATCGCC‑AAAATTATTTAACTCCACT‑‑TATAGATACCGATACTAAAGCCATATCAAGTAAGAGATGGTGCATCCg                                                                                                    <  2:1308103/145‑1 (MQ=2)
                                                 atGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATcc                                                                                                     <  1:1006488/150‑1 (MQ=40)
                                                 atGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATcc                                                                                                     <  8:613649/150‑1 (MQ=40)
                                                 atGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCg                                                                                                    <  4:391474/151‑1 (MQ=39)
                                                     tGCATCCGAGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTAGTTTACTGCTGA‑‑TATTTAGAGAGCTACTAAAGACAGATCAAGTATGAGATGGTGCATcagcg                                                                                                  >  6:1124191/1‑145 (MQ=14)
                                                       cATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCAGAAAGAAATACCGAGGAATAGGG‑AAAGATATTTTACTAAAGA‑‑TATTGATACCGGTCTAAAAGAAAAATAAAAAAAAAGATGGTGGATCGggggggg                                                                                              >  2:7903/1‑150 (MQ=2)
                                                        aTCCGGGAGGATTCGAACCTCCGACGGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGAt                                                                                             <  7:1632353/151‑1 (MQ=255)
                                                        aTCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATCGTGCATCCGGGAGGAt                                                                                             >  5:94118/1‑151 (MQ=255)
                                                         tCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAAGTTAGTTTACTGCAGA‑‑TATAGGTACCGCTACTAAAACGGTATCAATTTAGCGATTATGGTTCAGGGAGGAtt                                                                                            >  2:604074/1‑151 (MQ=11)
                                                          ccGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGC‑‑TATTg                                                                                                                                               >  6:1590518/1‑99 (MQ=255)
                                                          ccGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTg                                                                                                                                               <  4:1598781/99‑1 (MQ=255)
                                                          ccGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTTATAGAGCTAGTAAAGCCAAATCAAGTAAGAGATGGTGCATCCGGGAGGAtt                                                                                            >  2:1769928/1‑150 (MQ=255)
                                                            gggAGGATTCTAACCTCCGACCGCTCGGGTCGTAGCCGAGCTCTCTAACCCGCTCAGCAACCTATGCATCGGC‑ATATTTATTTTACTCCTGA‑‑TCTTGATACCGCTCATACCGCCATATCAAGTAACATATGGTGCATCCGGGAGGATTCGa                                                                                         <  6:507062/151‑1 (MQ=255)
                                                             ggaggaTTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTActgctg                                                                                                                                                       <  3:1176987/90‑1 (MQ=39)
                                                              gaggaTTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTTATACAGCTACTAAAGCCATATAAAGTAAGAGATGTTGCATCCGCGAGGATTAGac                                                                                        >  1:70845/1‑149 (MQ=14)
                                                               aggaTTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGAt                                                                                                                                             <  1:216264/96‑1 (MQ=255)
                                                                ggaTTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCGATATCAAGTAAGAGATGGTGCATCCGGGAGGATTAGactcg                                                                                     >  7:1032619/1‑147 (MQ=255)
                                                                 gaTTCGAACCTCCGACGGCGGGGATCGCAGCCGAGGACTCTTTCCAGCTGTGAAACGGATCGATCGGG‑ACATTTATTTTCCTCCTCA‑‑TCTTGCTTACGCTACTAAAGCCATATGATGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTc                                                                                    <  5:31817/151‑1 (MQ=9)
                                                                 gaTTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTAATTTACTGCTGA‑‑TTTTTATACCGCTAGTAAAGCCAGATAAAGTAAGAGATGTTGAATAAGCGAGGAttatacgcgc                                                                                    >  1:955062/1‑143 (MQ=11)
                                                                  aTTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTAGacgcgcc                                                                                   >  6:1789137/1‑145 (MQ=255)
                                                                    tCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTAGacgcgccgc                                                                                 >  5:1110965/1‑143 (MQ=255)
                                                                     cGAACCTCCGACCGCTCGGTTCGTAGCCGTTTACTCTATCCATCTGTGCTACTGATGCATGGGG‑TAATTTATTTTACTGCTGA‑‑TATTCATACCGCTACTAAAGCCATATCAAGTAACAGATGGTGCATCCGGGAGGATTCGAACCTCCGa                                                                                 <  2:21190/150‑1 (MQ=17)
                                                                      gAACCTCCGACCGCTCGGTTCGTAGCCGAGCACTCTAGCCAGCTGAGCTACGGAGGCAGGGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGAcc                                                                               <  5:105989/151‑1 (MQ=255)
                                                                         ccgcagcgctcggggTTCGTCGCCGAGTACTCTACCCACCTCAGCTACGGATGCATCGGC‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCt                                                                            <  5:1420944/138‑1 (MQ=17)
                                                                          cTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTAGTAAAGCCATATAAAGTAAGAGATGGTGCATCCGGGAGGATTAGactcgccgagccgcg                                                                           >  7:643888/1‑137 (MQ=14)
                                                                            cggacggcgggggtCGTAGCCGACTTGTGTTTCCAGCTGAGTTACGTACGCAGGGGG‑TAATTTTTATTCCTGCTGA‑‑TATTCCATCCGATACTATAGGCATATGTAGTATTATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCg                                                                          <  1:909493/137‑1 (MQ=9)
                                                                               aCCGCGCGGCGCGCAGCCGACGACTCTAACAAGCTGTTCAACTTACGAATCGGG‑AAATTTAAATTACTGCACA‑‑TATTGAAACCCCTACTACCGCCATATCAAGTACCATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCG‑GTTc                                                                     <  6:1449001/151‑1 (MQ=12)
                                                                                 cGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTTCTGa‑‑ta                                                                                                                                                  >  7:520647/1‑73 (MQ=255)
                                                                                  gCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTAGACGCTCCGAGCggagcgttcgtt                                                                   >  5:215373/1‑140 (MQ=14)
                                                                                  gCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTAATGCTGA‑‑TTTTGATa                                                                                                                                            >  7:528647/1‑78 (MQ=255)
                                                                                        gtCGTAGCCGGGTACGCTTTCCCCCTGCGCTACGGATGCAGCGGG‑AAAGTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCG‑GTTCGTAGCCGAg                                                            <  6:473201/150‑1 (MQ=18)
                                                                                          tttattttatttctctTTCGAGCTGAGCTACGTATGCATCGGG‑AAATTTTTTTTCCTGCTTA‑‑TATTGTTTCCGGTACTACATGCATATCAAGTACTAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCG‑GTTCGTAGCCGAGt                                                           <  3:523658/138‑1 (MQ=18)
                                                                                           gTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAAATTAATTTACTGCAGA‑‑TATTTTTAGAAGATCTTAAGAGATTACAGGTAAGAAATGGTGAATCCGATAGGATTCGAAACTCGGAGCGCACG‑GTTCTTaaaaaagta                                                          >  2:73268/1‑142 (MQ=2)
                                                                                             aGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTAATAAACACATATCAAGTAAGAGATGGTGCATCCGGGAGGATTAGACGCGCAGAGC‑CTCGCGCTCGTAGCCGAGTaga                                                        >  6:837615/1‑148 (MQ=14)
                                                                                                   gTACTCAATACCCCTGAGCTACTGATGCATCGGC‑AAATTTATATTACTCCTCA‑‑TATTGAAACCGCTACTACAGCAATATCACGTAAAAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCG‑GTTCGTAGCCGAGTACTCTATCCa                                                 <  5:618451/151‑1 (MQ=18)
                                                                                                    gcctcaATCCAGATGCGGTACGGACGCAGCGGG‑AACTTTATATTACTCCAGA‑‑TATTGCTACCGTTACTACAGCCATATGAAGTAATATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCG‑GTTCGTAGCCGAGTACTCTATCCAg                                                <  1:347446/149‑1 (MQ=18)
                                                                                                      gtgtatccccatGATCTACTGATGAATCGGG‑ACATTTAATTTCCTCCTGA‑‑TATTCCAAACCCTACTACCGCCATATCTAGTAACATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCG‑GTTCGTAGCCGAGTACTCTATCCAGCt                                              <  5:1620008/140‑1 (MQ=9)
                                                                                                             cAGCTGAGCTACGGATGCATCGGG‑AAAGTTATTTTActgct                                                                                                                                                        >  4:494204/1‑41 (MQ=255)
                                                                                                                        cgtagggcgcGGG‑AAATTTATTTTACTGCAGA‑‑TCTTGCAACCGCTACTACCTGCATATGTCGTACCATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCG‑GTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCgg                            <  5:169711/142‑1 (MQ=14)
                                                                                                                          gATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTAGTCCCTACGACCCGGCG‑CGTCGTCGCCGAGTCCTCATCCCCGCTCAGCTACGGGTTCATAggg                           >  5:478157/1‑150 (MQ=14)
                                                                                                                            tGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCAAGAGAGAGATGGAGCAGACGGGTGGATTCGAACCTCCCCCCGGTCG‑GTTCGTAGCCGAGTACTCTATCCAGCTGAGATACGGATGCATCGGGagt                        >  1:449938/1‑149 (MQ=25)
                                                                                                                              cATCGGGAAAACTTATTCTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACAACCTCAGACCCAACC‑CTTACTAGCCGAGTACTCTATCACGCTCAGCTACGGATGCAGGGGGaaa                        >  4:1271343/1‑150 (MQ=2)
                                                                                                                               aTCGGG‑ACATTTATATTACTCCTGA‑‑TATTGTAACCGATACTACCGGAATATTAAGTACTAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCG‑GTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGaa                         <  2:685529/147‑1 (MQ=14)
                                                                                                                               aTCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGACCCTACGACCGCTCG‑GGTCCGGTCCGAGTCCACTAACAAGTTCAGCGACGGCTGCACCgcgctactt                     >  7:430756/1‑143 (MQ=17)
                                                                                                                                   ggaaaaCTTATTCTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCg                                                                                  <  8:1143161/85‑1 (MQ=255)
                                                                                                                                   gg‑AAATTTTATTTACGGAAGA‑‑TATTCCAACCGCTCATAAAGCCATATTTAGTACCATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCG‑GTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAacttactt                 <  5:1752784/151‑1 (MQ=14)
                                                                                                                                   gctattcgtatatTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCG‑GTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAacttact                  <  3:184536/143‑1 (MQ=255)
                                                                                                                                         gttatttTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCG‑GTTCGTAGCCGAGTACTCTATCCAGCTGAGCCACGGATGc                                 <  6:1530874/129‑1 (MQ=255)
                                                                                                                                           atttgtACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCG‑GTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGc           <  1:1660696/145‑1 (MQ=255)
                                                                                                                                                tACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCg                                                                                                    <  4:1445714/57‑1 (MQ=35)
                                                                                                                                                    gctgA‑‑TATTGATACCGCTACTAAATCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCG‑GTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGAtttttt  <  1:1474994/150‑1 (MQ=255)
                                                                                                                                                    gctgA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCG‑GTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCaaatg                            >  4:1033059/1‑120 (MQ=255)
                                                                                                                                                      tgA‑‑TATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTAGAACCTACGCCCGAACG‑GGTCGTAGCCGAGt                                                           >  6:1195003/1‑91 (MQ=14)
                                                                                                                                                      |                                                                                                                                                      
TAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCG‑GTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTT  >  NC_000913/2818009‑2818305

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑