Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,947,591	0	A	.	36.1%	178.3 / 114.1	83	intergenic (+18/‑16)	metW/metV	tRNA‑Met/tRNA‑Met
Reads supporting (aligned to +/- strand):  ref base A (48/5);  new base . (28/2);  total (76/7)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.83e-02

CAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGTAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAAT‑C‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGTCTCCCATAAAAAAGCGCC  >  NC_000913/2947443‑2947740                                                                                                                                                       |                                                                                                                                                      cAAAACCGCCCCCGGCAACCAAAAACAATTGGATGAAGTCAAGGAGTCCGGGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAAT‑C‑AAATTTGATGAAGTaaa                                                                                                                                                     <  5:152768/151‑1 (MQ=17)  atatcctgacgcctcAAACAATTAAATTTTGCTGAAGTATCGGAATACGGTGACGCGGGGTGTAGCAGCCTGGTAGCTCGTCGGGCTCATTACCCGAAGGTGGTCGGTTCAAATGCGGCCCCCGCAACAAAT‑C‑AAATTTGATGAAGTaaat                                                                                                                                                    <  6:307675/137‑2 (MQ=17)      actgccgccTCAACCAAATATAAATTGCAGAATTATCGCACTACTGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAAT‑C‑AAATTTGATGAAGTAAAAGCAg                                                                                                                                                <  7:299045/148‑1 (MQ=14)           ccccGCAACCAATTAAAATTTGATGAAGTAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCCGCCCCCGCAACCAAT‑C‑AAATTTCACGCAGTAAACGGAGTACgg                                                                                                                                           >  5:1311054/1‑151 (MQ=17)               ggaaCGAATTATACTTTGCAGAATTCAAGCACTCCGCGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAAT‑C‑AAATTTGATGAAGTAAAAGCAGTACGGTGAc                                                                                                                                       <  3:830974/149‑1 (MQ=14)                  aCCAATTAAAATTTGATGAAGTAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAAT‑T‑AAAGAACAAGCAGTAAGGGGAGTACTGTGAcgcg                                                                                                                                    >  5:706420/1‑151 (MQ=14)                                          aGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAAT‑C‑ATATTTGATGAAGTAAAAGCAGTACTGTGACGCGGGGTGGAGGAGCCTGGTAGCtcgg                                                                                                            >  5:1646610/1‑150 (MQ=255)                                               tccgctGACGCGGGGGGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGGCGGTTCAAATCCGGCCCCCGCAAGCAAT‑C‑AAATTGGTGGAACTATTCGCCGTACGGGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCggg                                                                                                        <  7:613301/145‑1 (MQ=14)                                                           gtctGGAGGAGGGTGGTCGCTGGTCGCGCTCTTAACCCGAAGGGCGTCGGGTCTAATCCGCCCGCCGGAACCAATAC‑AACTTAGCTGAAGTATTCGC‑CTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGaa                                                                                           <  1:920827/148‑1 (MQ=2)                                                                                          aTAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAAT‑A‑AAATTAGATCAAGTAAAAGCAGTAAGGTGAACAGGGCTCCACAAGCCAGGTAGCACGTCGGGCTCATAACACCAACGTAGACGGTACAAATCCGCCCCCCGCAAc                                                             >  2:106602/1‑150 (MQ=2)                                                                                              cccGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAAT‑C‑AAATTTGAAGAACTAAAAGCAGTACGGTGACGCGGGGTGGagcag                                                                                                                         <  6:1408782/86‑1 (MQ=255)                                                                                                               cAAATCCGGCCCCCGCAACCAAT‑C‑AAATTTGATGATGTAAAAGCAGTACGTTGACCCGGGCTGGCGGAGCCTGGTGCCTGGTCGGGCTCATAACCCGAACCTAGTGCGTTAAAATCCCGCCCCCGCAACCAATTATTGAACACCCTaaacg                                       >  5:619545/1‑148 (MQ=17)                                                                                                               cAAATCCGGCCCCCGCAACCAAT‑C‑AAATTTGATGAAGTAAAGGCAGTTCGGTGACGCGGGGTGCAGCAGCCTGGTAGCTCGTCGGGCTCATATCCCGAAGGTGGGGGGTTCACCTCGGGCCCGCGCCACCAATTATTGAACAcccgcccgg                                       >  5:382500/1‑145 (MQ=14)                                                                                                                      ggCCCCCGCAACCAAT‑C‑AAATTTGATGAAGTAAAAGCAGTACTGTGACGCGGGCTCGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCCAATCCGGCCCCCGCAACCAATTAATGAACACCCTAACGGCTCtttt                                >  4:1548376/1‑151 (MQ=17)                                                                                                                       gCCCCCGCAACCAAT‑C‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGttttt                               >  2:946923/1‑151 (MQ=255)                                                                                                                       gCCCCCGCAACCAAT‑C‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGGCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGtttgt                               >  7:942317/1‑149 (MQ=255)                                                                                                                         ccccGCAACCAAT‑C‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGttttttt                             >  7:517008/1‑151 (MQ=255)                                                                                                                          cccGCAACCAAT‑C‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTg                            >  7:446891/1‑151 (MQ=255)                                                                                                                           ccGCAACCAAT‑C‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGt                           >  2:1401242/1‑151 (MQ=255)                                                                                                                           ccGCAACCAAT‑C‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGt                           >  2:1482815/1‑151 (MQ=255)                                                                                                                            cGCAACCAAT‑C‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGtt                          >  6:655338/1‑151 (MQ=255)                                                                                                                            cGCAACCAAT‑C‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGtt                          >  7:530531/1‑151 (MQ=255)                                                                                                                             gCAACCAAT‑C‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGttt                         >  1:126903/1‑151 (MQ=255)                                                                                                                              cAACCAAT‑C‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGtttg                        >  5:335684/1‑150 (MQ=255)                                                                                                                              cAACCAAT‑C‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGtttg                        >  4:888057/1‑150 (MQ=255)                                                                                                                              cAACCAAT‑C‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTc                        >  7:1103963/1‑151 (MQ=255)                                                                                                                               aaCCAAT‑TAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGTAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAAAGGGTGttttagctcggg                        >  1:643598/1‑142 (MQ=11)                                                                                                                               aaCCAAT‑TAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGtttt                                <  3:643891/142‑1 (MQ=255)                                                                                                                               aaCCAAT‑TAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTAAAATCCGGCCCCCGCAACCAATTATTTAACAACCAAAAGGGTGTTTTTTTGtttgt                       >  4:1457453/1‑149 (MQ=11)                                                                                                                               aaCCAAT‑TAAAATTTGATGAAGT‑AAAGCAGTAAGGTGACTCGGGGTTGAGAAGCCTGGTAGCTCGTCGGGCTCATAAACCGAAGGTCGTAGTTTAAAAGCAGGACACCGCAACCAATTATTGAACACCATAACGGGGGTTTTTGTGTATCt                       >  6:1608682/1‑151 (MQ=2)                                                                                                                               aaCCAAT‑C‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCt                       >  1:1726687/1‑151 (MQ=255)                                                                                                                               aaCCAAT‑C‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCt                       >  6:948634/1‑151 (MQ=255)                                                                                                                                aCCAAT‑C‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTg                      >  8:1471525/1‑151 (MQ=255)                                                                                                                                 ccAAT‑C‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTgg                     >  1:931040/1‑151 (MQ=255)                                                                                                                                 ccAAT‑C‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTgg                     >  3:824178/1‑151 (MQ=255)                                                                                                                                 accaattaaaaTTTGATTAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACggg                                      <  3:1346225/127‑1 (MQ=11)                                                                                                                                 accaattaaaaTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATAAATTAACAACAAAACAGGTGTTTTTTTTTTTCTg                      >  4:890264/9‑151 (MQ=11)                                                                                                                                  ccaattaaaaTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGGGTTTTTTTGTTTCTgg                     >  1:320153/8‑151 (MQ=255)                                                                                                                                  ccaattaaaaTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAAAGGGTGTTTTTTTGTTTCTgg                     >  7:798133/8‑151 (MQ=255)                                                                                                                                  cAAT‑C‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGt                    >  3:1085949/1‑151 (MQ=255)                                                                                                                                   caattaaaaTTTGATGAAGT‑GAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACAACCTAAAGGCTGTTTTTTTGTTACAGGt                    >  8:1402812/7‑151 (MQ=11)                                                                                                                                   caattaaaaTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAAAGGGTGTTTTTTTGTTTCAggg                    >  2:610371/7‑150 (MQ=14)                                                                                                                                    aattaaaaTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCAATCCGCGGTTTTTTTGTTTCTGGtg                   >  1:1290618/6‑150 (MQ=14)                                                                                                                                    aT‑C‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGtct                  >  5:1091617/1‑151 (MQ=255)                                                                                                                                     attaaaaTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTCTTTTGGTGGTTCTGGtct                  >  5:347411/5‑151 (MQ=14)                                                                                                                                     attaaaaTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACAACCTAAATGGGGTTTTATTTTTTCTGGtct                  >  4:1371413/5‑151 (MQ=14)                                                                                                                                      ttaaaaTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAATGAACACCATGAAGCGTGATTTATTggaagaggtctc                 >  5:591660/4‑140 (MQ=1)                                                                                                                                       taaaaTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTTAACACCCTAAAGTCTCTTTTTTTTTTAGTGGTCTcc                >  8:575493/3‑151 (MQ=11)                                                                                                                                       taaaaTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGATCAACCTGAAGGGTGAGTTTTTGTTTGAGGtctgc                >  2:680358/3‑149 (MQ=11)                                                                                                                                        aaaaTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATGATTGAACACGATAAAGCGGGTTTTGTTGTTAGTGGTCTccc               >  5:548968/2‑151 (MQ=11)                                                                                                                                        aaaaTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATAATTTAACAACCTAAAAGGTGTGTTTTTGTTTCTGGTCTccc               >  3:1730603/2‑151 (MQ=14)                                                                                                                                         aaaTTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGtctcac               >  2:593153/1‑149 (MQ=255)                                                                                                                                         aaaTTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGTCTccc               >  1:1409337/1‑151 (MQ=255)                                                                                                                                         aaaTTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGTCTccc               >  7:195647/1‑151 (MQ=255)                                                                                                                                         aaaTTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGTCTccc               >  4:1062281/1‑151 (MQ=255)                                                                                                                                         aaaTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGATCAACCTGTCGGCTGTTTATTTGTTGCTGGTGTccc               >  1:130777/1‑150 (MQ=14)                                                                                                                                          aaTTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGTCTccc               >  5:1831714/1‑150 (MQ=255)                                                                                                                                          aaTTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGTCTccc               >  2:697169/1‑150 (MQ=255)                                                                                                                                          aaTTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGTCTccc               >  3:208786/1‑150 (MQ=255)                                                                                                                                           gtttGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGTCTCCCAt             >  8:863350/2‑150 (MQ=255)                                                                                                                                           gtttGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACCCGTGTTTTTTTGGTTCGGGTCTCCCAt             >  3:440881/2‑150 (MQ=17)                                                                                                                                           aTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTTATCACCCTATCGGGGGTGTATTTGGTGGTGGTCTCCCAt             >  1:266935/1‑150 (MQ=14)                                                                                                                                           aTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGCGGGTTTTTTTGTTTCTGGTCTCCCAt             >  7:89095/1‑150 (MQ=255)                                                                                                                                           aTTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATAATTGAACAGCCTAACAGGTCTGTTGTTGTTTCAGGTCTCCCAt             >  3:1803926/1‑150 (MQ=14)                                                                                                                                            tttGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGTCTCCCAt             >  5:490009/1‑150 (MQ=255)                                                                                                                                            tttGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACACGAACGTCGTCGGTTCAAATACGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGTCTCCCAt             >  4:1600187/1‑150 (MQ=255)                                                                                                                                            tttGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTATCCGGTGTGTATTTGTTTCTGGTCTCCCATa            >  7:876077/1‑150 (MQ=17)                                                                                                                                            tttGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAGAACACGCTAACCCGTGTTTTTTTGATACAGGTCTccctaa            >  6:947603/1‑147 (MQ=14)                                                                                                                                            tttGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATAATTTAACACCCTAACCAGTGATTTTTTGTTTCAGGTCTCCCATa            >  3:1694513/1‑150 (MQ=14)                                                                                                                                             ttGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATAAATGAACACCCTATCGGTTGAGTTTTGGGTACTGGTGTCCCATaa           >  5:1791957/1‑150 (MQ=11)                                                                                                                                              tgatgaAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGTCTCCCATaa           >  5:1007945/1‑150 (MQ=255)                                                                                                                                                atgaAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGTCTCCCATaaaa         >  2:505958/1‑150 (MQ=255)                                                                                                                                                atgaAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATGATTTAACACCATGACGGGGGTTTTGTTGTTGCTGGGGTCCCATaaaaac       >  7:1812533/1‑150 (MQ=14)                                                                                                                                                 tgaAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGTCTCCCATaaaaa        >  4:1586823/1‑150 (MQ=255)                                                                                                                                                  gaAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGTCTCCCATaaaaa        >  2:1822949/1‑149 (MQ=255)                                                                                                                                                  gaAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCAGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAAAGGGTGTTTTTTTGTTTCTGGTCTCCCATAAAAAAgc     >  3:949395/1‑151 (MQ=255)                                                                                                                                                   aaGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGTCTCCCATAAAAAAgc     >  1:521702/1‑151 (MQ=255)                                                                                                                                                   aaGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGTCTCCCATAAAAAAgc     >  3:1232593/1‑151 (MQ=255)                                                                                                                                                   aaGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGTCTCCCATAAAAAAgc     >  5:1311569/1‑151 (MQ=255)                                                                                                                                                    aGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGTCTCCCATAAAAAAgcg    >  1:618855/1‑151 (MQ=255)                                                                                                                                                     gTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACGCTAACGGGTGTTTTTTTGTTTCTGGTCTCCCATAAAAAAgcgc   >  3:287014/1‑151 (MQ=255)                                                                                                                                                     gTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGGGTTTTTTTGTTTCTGGTCTCCCATAAACAAgcgc   >  3:561089/1‑151 (MQ=255)                                                                                                                                                      tAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGTCTCCCATAAAAAAGCGcc  >  3:1809405/1‑151 (MQ=255)                                                                                                                                                      tAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGTCTCCCATAAAAAAGCGcc  >  8:1713577/1‑151 (MQ=255)                                                                                                                                                      tAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGTCTCCCATAAAAAAGCGcc  >  5:628325/1‑151 (MQ=255)                                                                                                                                                       |                                                                                                                                                      CAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGTAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAAT‑C‑AAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGTCTCCCATAAAAAAGCGCC  >  NC_000913/2947443‑2947740

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑