Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 3,270,151 | 0 | A | C | 25.1% | 187.7 / 35.0 | 210 | intergenic (+549/+474) | yhaC/garK | pentapetide repeats‑related protein/glycerate kinase I |
Reads supporting (aligned to +/- strand): ref base A (95/51); new base C (47/2); total (155/55) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 5.29e-06 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 215 total aligned reads displayed.
GCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCAT‑CTTTCTGCCCCTCCAAAAGCAAAAACCCGCCG‑AAGCGG‑GTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACC > NC_000913/3270009‑3270301 | acctctttctttTGTTTATCTTGTCGTCGAAAGTCTTATTTATTAATGCCACTCAAAAATCATAAACCCGCCGTAACGGGTTTTTACGTAAATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGtcatt < 8:1318834/147‑1 (MQ=2) gtttGGGTATAGTGTCGTGGACAGTAATTCATCTTTCTGCCCCTCCAAATGCACCCAGCCCCCGCAGCGGCTTTTTACGCAAACCCGCTCAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCAT‑CTTTCt < 6:453937/150‑1 (MQ=11) gTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGCGAGTCATTCAT‑CATTTTCCCCCTCCAAAAGCAAAAACccg > 7:426622/1‑151 (MQ=255) atattaatcccacTCAAAAATCTAAAACCCGCCGCAGCGGTTTTTTACGTAAAACAGGTTAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCAT‑CTTTCTGCCCCTCCAAAAGCAAAAACCCGCCG‑AAGc < 6:1134561/139‑1 (MQ=11) cTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCTTGGCAAGTCCATCAA‑GGTTATGCGCCGGCAAAAGCAAAAACCCGCag‑cagccg > 8:584710/1‑149 (MQ=11) cTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGAGACGTATAAAGGCAATCAT‑AATTAACCGCCAACAAAAACAAAAACccgcatcagacc > 3:11367/1‑143 (MQ=11) atttCTGCCACTCAAAAAGCTGAAACCCGCCGTAGCGGTTTTTTACGTAAATCAGGTTAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCAT‑CTTTCTGCCCCTCCAAAAGCAAAAACCCGCCG‑AAGCgg < 5:406909/150‑1 (MQ=11) ttCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTAAAGCCTCGACGACACTCAATCAA‑ATATACGCACCAACAAAAACAAAAACCCGACG‑AAGcacct > 4:1245997/1‑147 (MQ=11) ttCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTGTTGGGTATAGCGTCGTGGCGAGGCCATCGT‑CATTGGGCCCCGGCAATACCAAAAACCCGCCG‑CAGggg‑gg > 5:1850762/1‑150 (MQ=11) ttCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCGTTCTTTTGGGTATAGCGTCGTGGCCAGGCATTCAA‑CGTGCGGCCCCTCCAAAAACAAAACCCCGCCG‑CAGCcg‑gg > 3:143661/1‑150 (MQ=11) tCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGCAAGGCAATCAT‑CATAGACCGCCTCCAAAACCAAAAACCCGCAG‑AAgaccggg > 4:451208/1‑145 (MQ=11) cgctcccTCCACAATCAGAAACCCGCCGTATCGGTTTTTTACGTAAATAATGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGATAGTCATTCAT‑CTTTCTGCCCCTCCAAAATCAAAAACCCGCCG‑AAGCGG‑Gttt < 4:906919/147‑1 (MQ=11) cccTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGAGAGTCCATCAT‑AATTTAACACCCACAAAAACAAAAACCCGGCG‑CAGCCC‑GTGTTTa > 3:1611545/1‑150 (MQ=11) cTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGGATAGCGTCGTGGAGAGTCATTCAT‑CTTTCTGCCCCTCCAAAAGCAAAAACCCGCag‑cagcccgtgttttcg > 1:262315/1‑139 (MQ=11) ccAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTGGTGTCAAGTCCATCAT‑GGTTGGGCGCCCGCAAAAGCCAAACACCGCCG‑CAGCggcggttttcggt > 1:1013037/1‑139 (MQ=2) ccccccccccccccGCCGAAGCGGGTTTTTACGTAAACCCGCCGCCCCTGACCGCTCAGGGCCTTGCTTTCGGCCCTCGGGTCGTGCCCAGTCATTCAT‑CTTTCTGCCCCTCCAAAAGCAAAAACCCGCCG‑AAGCGG‑GTTTTTACGTAAAt < 1:1410294/140‑1 (MQ=2) aaaGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTAGGGTATAGCGTCGTGGCAAGGCATTGAA‑GGTGTTGCAGCGGCAAAAACAAAAACCCCCCGCAGGCGG‑GTTATTAGGTaatc > 1:1750809/1‑149 (MQ=2) atttcaaaCCCGCCGTAACGGTTTTTTACGTATATGAGGTTAAAATGACGGATATTCGGCTTTCTTTTGTGTATTGCGTGGTGGAAAGTCATTGAT‑CTTTCTGCCCCTACAAAAGC‑AAAACCCGCCG‑AAGCGG‑GTTTTTACGTAAATCAgg < 8:545399/146‑1 (MQ=2) gCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGGCAGTAAATAATAATTTGTACCCAACAAAAACAAAAAACCCCCGC‑AAACGG‑TTTTTTACTTaataa > 2:726555/1‑146 (MQ=2) cctcatcccatctgAAGCGGGTTTTTACGTAAACCAGGTGAAACTGTCTTATAATAATTTTTATTTTGTGTATAGAGTTGTTGACATTCATTTAT‑CTTTATTCCCATCAATAAGCTAATACGATCCG‑AAGCGG‑GTTTTTACGTAAATCAgg < 8:1808182/138‑1 (MQ=255) ccacaaaCCCGCCGCACCGGGTTATTACGTACAGCAGCTCAAACTGACCGATAAGCCGCTTTCTTTTGGGTATCGCCTCGTGGACAGTCATTCAT‑CTTTCTGCCCCTCCAAAAGCAAAAACCCGCCG‑AAGCGG‑GTTTTTACGTAAATCAgg < 1:1389031/147‑1 (MQ=11) gaaaacCCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACTGTCATTCAT‑CTTTCTGCCCCTCCAAAAGCAAAAACCCGCCG‑AAGCGG‑GTTTTTACGTAAATCAGGt < 5:512393/150‑1 (MQ=25) aaaaaCCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGGATAGCGTCGTGGCTAGTCAATGAT‑CGTTTTCCCCCAACAAAACCAAAAACCCGCGG‑AAGAGG‑GGTTTTTCGATAATCAGGTg > 6:1609673/1‑151 (MQ=11) aaaCCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGCCAGGCATTCAT‑CTTTGTGCGCCGCCAAAAGCAAAAACCCGCCG‑CAGCGG‑GGTTTTTCGTAAATCAGGTGa > 6:712871/1‑150 (MQ=11) cgccgGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTAGTGGAAAGTAAGAGAT‑CACTGATGACCTCCAAAAACAAAAAACCGCCG‑ACGCGG‑GGTTTTACGGTAATCACGTAAAAATgc > 7:1669546/1‑150 (MQ=9) cgACGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATCGGTGCGTGGACTTGCATTCAT‑CTCTCTGCCGCTCCAAAAGCAAAAACCCGCCG‑AAGCGG‑GTTTTTACGTAAATCAGGTGAAACTGACCg < 1:871858/151‑1 (MQ=11) cgAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGAGTAGAGTCAATCAA‑GATTTAGCTCCGACAAAACCAAAAACCCGCAG‑CAGGCG‑GGGTGTACGTAAATCAgcggcaaatgagcc > 4:1149614/1‑138 (MQ=2) caGCGGGGTTTTACGTAAACCAGGTGAAACTGACCGATAATTTTTTTTATTTTTTGGCTAGCGTCGTTGACATTCATTAAT‑CTTTCTTCTCTTTCAAAAGACTAATCGCTTCG‑TATCTG‑GTTTTTACGTAAATCAGGTGAAACTGACCGAt < 2:1458914/150‑1 (MQ=255) aaGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGCCAGTCAGTCAT‑GTTTGGGCGCCGCCAAAAGCAAAAACCCGCCG‑AAGCGG‑GTTTTTACGTAAATGACGTGAAACTGACCGAt > 6:533388/1‑151 (MQ=11) ccgctgttatcaactAAACCACGGGAAACTGACCGATAAGCCGCTTTCTTTTTTTTATATTGTTGTGGAGAGTCCTTATT‑GTTTCTGTATCTCCAAAACAAAAAACCCTCCG‑AAGGGT‑GTTTTTACGTAAATCAGGTGAAACTGACCGATa < 3:941503/137‑1 (MQ=2) cGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGCCAGTCAATCAA‑GATTCACCCCCGCCAAAAGCAAAAACCCGCCG‑CAGCCG‑GTTTTTACGTAAATCAGGTGAAACTGCCCCATaac > 1:948556/1‑150 (MQ=11) cGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGAAAGGCATTCAA‑GGTGGGGCCCCTGCAAAAGCAAAAACCCGCCG‑CAGACC‑GGGGTTACCTAAATCACGTGCAACTTAcccttacg > 4:1603695/1‑145 (MQ=2) gggTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGCCAGTCATTCAT‑ATTTGTGCCCCTCCAAAACCAAAAACCCGCCG‑CAGCCG‑GGTTTTACGTAAATCAGGTGCAACTGACCGAAAAGc > 1:586120/1‑151 (MQ=11) gggTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCAA‑CTTACGGCCCCAACAAAAACAAAAAACCGCCG‑AAGCCG‑GTTGTTACCTAAATCAGCTGAAAATTACCGATAAGc > 4:1397007/1‑151 (MQ=11) gggTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGAATAAAGTCAATCAT‑AATTAGACACCAACAAAAACAAAAACCCGCAC‑AATCAC‑GTTAATAACTAAATAAAGAGAAAATTACCGATaat > 2:1095024/1‑149 (MQ=2) gggaaatACGTACACCAGGTCAAACTGACCTATAAGCCCCTTTCTTTTGGGTATAGCGTCTCTGCGTGTCCTTCTT‑CTTTCAGACCCTCCAAAATCAGAAACCCGCCG‑AACCGG‑TTTTTTACGTAAATCAGGTGAAACTGACCGATAAGcc < 7:1536254/145‑1 (MQ=2) tttACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGCCAGTCATTCAT‑CTTTCTGCCCCTCCAAAACCAAAAACCCGCCG‑AAGCGG‑GTGTTTAAGGAAATCAGGTGAAACTGCCCCATAAGCCGGGt > 7:368109/1‑151 (MQ=14) tttACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGAAAGGCAATCAT‑AATTAGGCGCCAACAAAAGCAAAAACCCGCCG‑AAGCGC‑GGTTATAAGAAAATCACCAGAAAAATACCGATAATCCggct > 2:1303292/1‑149 (MQ=2) ttACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGGCAGTCATTCAT‑CTTTCTGCCCCGCCAAAACCAAAAACCCGCCG‑AAGGGG‑GTTTTTACGTAAATCACGTGAAACTGCCCGCTAAGCCGGGtt > 6:385133/1‑151 (MQ=14) tACGTAAACCAGGTGAAACTGCCCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGGCAGGGATTCAT‑CTTTGTGCCCCTCCAAAAGCAAAAACCCGGCGCACGGGG‑GTTTTTA‑GTAAATGAGGTGAAACTTACCCATAATCCGGGttg > 1:1371766/1‑150 (MQ=14) aCGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGCCAGTCAGTCAT‑AGTTATGCCGCGCCAAAAGCAAAAACCCGCCG‑CAGCGG‑GGTTTTACGTAAATCAGCTGCAACTGCCCGATAAGCCGGGTTCt > 5:1418723/1‑151 (MQ=14) cGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTGATTCAT‑CTTTGTGCCCCTGCAAAAGCAAAAAACCGCCG‑CAGCGG‑GTTTTTTAGTAAATGAGGTGAAAATTTCCGATAAGCCGGGTTATg > 6:1028092/1‑151 (MQ=14) gTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGGCAGTCATTCCT‑ATTTGTGGCCCGCCAAAAACAAAAAACCCCCC‑CAGCGG‑GGGTTTTAGTAAATCACGTGAAACTGACCGATAATCCGGGGTCTGt > 5:1345925/1‑151 (MQ=14) tAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGGAACTACTTGAT‑CTTTATGCCCCTCAAAAAGCAAAAACAACCCC‑AAGCGGCGTTTTTACG‑AAATAAGGTCAAACTTAAACAAAAACCGGGTTgtgtt > 5:81897/1‑150 (MQ=2) tAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGCCAGTCATTCAT‑GGTTGGGCCCCGGCAAAAGCAAAAACCCGCCG‑AAGCGC‑GGTTTTACGGAAATCAGGTGCAAATGACCGATAATCCGGGTTCTGtt > 6:182390/1‑150 (MQ=14) aaCCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCAT‑CTTTCTGCCCCCCCAAAACCAAAAACCCGCCG‑CAGCCG‑GGTTTTACGTAAATCAGGTGAAACTGACCCATAAGCCGGGTTCTGTAGt > 5:1783107/1‑151 (MQ=14) cgaggctattcTGATCTATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCAT‑CTTTCTGCCCCTCCAAAAGCAAAAACCCGCCG‑AAGCGG‑GTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTgg < 8:868873/141‑1 (MQ=14) ggTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGGCAGTCATTGAT‑CTTTGGGCCCCTCCAAAACCAAAAACCCCCCG‑CAGCGG‑GGTTTTACGTAAATCAGGTGAAACTGGCCCATAAGCCGGGTTCTGTGGTGGAcc > 1:296724/1‑150 (MQ=14) ggTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGCCAGTCATTCAT‑CTTTGTGCCCCTGCAAAAGCAAAAACCCGCCG‑CAGCGG‑GGTTTTTAGTAAATCAGGTGAAACTGCCCGATAAGCCGGGTTGTGtggtgggac > 6:632230/1‑148 (MQ=14) gTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCAT‑CTTTATGCCCCTCCAAAAGCAAAAACCCGCCG‑AAGCGG‑GGTTTTTAGTAAATCAGGTGAAAATGACCGATAAGCCGGGTTATGTCGTGGAc > 2:215498/1‑149 (MQ=14) gAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCAT‑CTTTCTGCCCCTCCAAAAGCAAAAACCCGCCG‑AAGCGG‑GTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGtc > 6:977303/1‑151 (MQ=255) actctgttcttttctccGCTTTCTTTTGGGTATAGTGTGTTGGATAGTTTTTCAT‑CTTTCTGCCCCTCCAAAAGCAAAAACCCGCCG‑AAGCGG‑GTTTTTAGGTAAATCAGGTGAAACTGACCGATAAGGGGGGTTCTGTCGTGGACAGtca < 4:657441/136‑1 (MQ=14) aaaCTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCAT‑CTTTGTGCCCCTGCAAAAGCAAAAACCCGCCG‑CAGAGG‑GGTTTTACGTAAATGAGGTGAAACTGACCGATAAGCCGGGGTCTGTGGTGGGCCGtct > 8:240672/1‑150 (MQ=14) aaaCTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCAATCAT‑CTTTCTGCCCCTCCAAAAACAAAAACACCCCG‑AAGCCC‑GTTTTTACGTAAATCACGTGAAACTCACCGATCAGCCGGGTTCTGTCGGGGGCacgc > 1:1140750/1‑147 (MQ=14) aaCTGACCGATAAGCCGCTTTCTTTTGTGTATAGTGTCGTGTAAAGTCAATAAA‑AATAAAACACCAACAAAAACAAAAACCCGCCG‑CAGAAC‑GTTTTTACCTAAAACACGAGAAAAATACCCATAATCAGGGTTCAGtaggagctagac > 8:805171/1‑138 (MQ=0) aCTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGCCAGTCATTCAT‑CTTTTTGCCCCTCCAAAAGCAAAAAACCGCCG‑AAGCGG‑GGTTTTAAGTAAATCAGGTGAAACTGACCCATAAGCCGGGTTCTGGCGTGGTCAGtgatt > 5:1293046/1‑151 (MQ=14) cTGACCGATAAGCCCCTTTCTTTTGGGTATAGCGTCGTCGACAGTAATACCA‑CAATAAGCAACTACAAAAGCAAAAACACCCCC‑AACCGC‑GTTATTAAGTAAATCATGTGAAACAGCCCCAAAATCCGGCTGCTCTCGAGCAGAGtcatt > 2:608749/1‑150 (MQ=255) tGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGCCAGTCATTCAA‑CTTTCTGCCCCGCCAAAATCAAAAACCCGCCG‑AAGCGG‑GTTTTTAACGAAATAAGCTGCAACTGACCGATAACCAGCGTTATGTTGTGGCCAGtaaatc > 1:1499067/1‑145 (MQ=11) tGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTAAT‑CTTTCTGCCCCACCAAAAGCAAAAACCCGCCG‑AAGCGG‑GTTTTTACGTAAATCACGTGAAAATGACCGATAAGCCGGGTTATGTGGTGGGCAGtgatta > 8:1119396/1‑149 (MQ=14) gACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCAT‑CATTCTCCCCCTCCAAAACCAAAAACCCGCCC‑CAGACC‑GGATTTACCTAAATCAGGGGAAACTGACCCAAAAGCCGCGTTGTGTCCTGCACAGtcattaa > 3:1553235/1‑148 (MQ=14) aCCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTAATTCAT‑ATTTCTTCCCCTCCAAAAACAAAAACCCCCCG‑AAGCGG‑GTTTTTAAGTAAATCAGGTGAAACTGACCCATAAACCAGGTTATGTCGTGGACAGtcattaat > 4:583054/1‑150 (MQ=17) ccgcgaacccGCGTTCTTTTGGGTATAGCGTCGTTGACAGTCATTCAT‑CTTTCTGCCCCTCCAAAACCAAAAACCCGCCG‑AAGCTG‑TTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCt < 7:630624/143‑1 (MQ=17) ccGATAAGCCGCTTGCTTTTGGGGATACCGGCGTGGACATGAAACCAG‑CTTTCTGCCCATCCAAAAGCAAAAACCCGCCG‑AAGCGG‑GTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCt < 6:646575/151‑1 (MQ=17) cGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGGCAGTGATTCAT‑CTTTCTGCCCCTCCAAAAGCAAAAACCCGCCG‑CAGCGG‑GGTTTTAAGTAAATAAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCt > 3:1293329/1‑150 (MQ=17) cccaGCCGCTGTCTTTTGGTTTTAGCGGCGTCCACAGGCAGTCAT‑CACTCTGCCCCTGCCTGACGTCACAGCAGCCG‑ATGGCG‑CTTACTACCTACATCAGGTTAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAgg < 1:772044/148‑1 (MQ=255) aTAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCAT‑CTTTCTGCCCCAACAAAAGCAAAAACCCGCCG‑AAGCGG‑GTTTTTAAGTAAATCAGGTTAAAATGACCCATAAGCCGGGTTATGTCGTGGACAGTCATTCATCTatg > 2:1502249/1‑149 (MQ=17) aGCCGCTTTCTTTTGGGTATAGCGTCGTGGGCACTCATTGAT‑CTTTATGGCCCGCCAAAAACAAAAAACCCCCG‑AAGCGG‑GGTTTTTAGTAAATAACGGGAAACTGACCCCAAATCCCGGTTGTGTCGTGGGCAGTCATTCATCGAGGccc > 5:1137754/1‑150 (MQ=9) gCCTCTTTCTTTTGGTTATAGTGTCTTTTACTTTCTTTCAT‑ATTTATGCCCCTCCAAAAGGTAAAACCCGCCG‑AAGCGG‑TTTTTTACGTAAATCAGGTTAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCa < 2:1392285/150‑1 (MQ=17) gCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCAT‑CTTTCTGCCCCTCCAAAAGCAAAAACCCGCCG‑CAGCGG‑GTTTTTACGTAAATCAGGTGAAACTGGCCGATAAGCCGGGTTCTGTCGTGGCCAGTCATTCATCTAGGCCac > 7:212922/1‑150 (MQ=255) ccGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCAT‑ATTTCTGCCCCTCCAAAAGCAAAAAACCGCCG‑AAGCGG‑GTTTTTAAGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGGCAGTCATTCATCTAGGCCAGc > 8:64050/1‑151 (MQ=255) cggtttctttTGGTTATAGTGTTTTGTACAGTCATTCAT‑GTTTCTGTGACTACAAAAGTAATAACTAGCAG‑AATTGG‑GTTTTTATGTAATTCACGTTATACTGACCGTTAAGCCGGGTTGTGTCGTGGACAGTCATTCATCTAGGCCAGCa < 2:1785827/148‑1 (MQ=12) gCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCAT‑CTTTCTGCCCCTCCAAAAGCAAAAACCCGCCG‑AAGCGG‑GTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGCCAGTCATTCATCTAGGCCAGCa > 6:1570637/1‑150 (MQ=255) gCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCAT‑CTTTCTGCCCCTCCAAAAGCAAAAACCCGCCG‑AAGCGG‑GTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCa > 6:303312/1‑150 (MQ=255) ctttctttTGGGTATAGCGTCGTGGACAGTCATTCAT‑CTTTATGCCCCTACAAAAGCAAAAACACCCCG‑AAGCCG‑GTTTTTAAGTAAATCACGTGAAACTGACCCATAAGCCGGGTTATGTCGTGGACACTCATTCAACTAGGCCAGCaa > 6:1679726/1‑150 (MQ=17) ctttctttTGGGTATAGCGTCGTGGACAGTCATTAAT‑AATTGTGCCCCACCAAAAGCAAAAAACCCCCG‑CAGCGG‑TGTTTTAAGTAAATCAGGTGAAACTGACCGAAAAGCCGGGTTAAGTCGTGGAAAGTAATTAATATAGGCCCGCaa > 2:784392/1‑150 (MQ=255) tttctttTGGGTATAGCGTCGTGGACAGTCATTCAT‑CTTTCAGCCCCTCCAAAAGCAAAAAACCGCCG‑AAGCGG‑GTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGCCAGTCATTCATCTAGGCCAGCAATc > 1:109184/1‑151 (MQ=255) ttctttTGGGTATAGCGTCGTGGCCAGTGATTCAT‑CGTTGAGCCCCACCAAAAGCAAAAACCCGCCG‑CAGCGG‑GTTTTTTCGTAAATGAGGTGAAACTGACCGAGAAGCCGGGTTCTGTGGTGGACCGTGATTAACGTAGGCCAGCAATCg > 7:135691/1‑151 (MQ=255) ttctttTGGGTATAGCGTCGTGGACAGTCATTCAT‑CTTTCTGCCCCTCCAAAAGCAAAAACCCGCCG‑AAGCGG‑GTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCCGCAATcc > 8:1382896/1‑150 (MQ=255) tctttTGGGTATAGCGTCGTGGACAGTAATTCAT‑CTTTCTGCCCCTCCAAAAACAAAAACACGCCG‑AACCCC‑GTTTTTACGTAAAACAGCTGAAACTGACCGATAAGCCGGGTTCAGTACTGGACAGTCATTCAACGACGCCACCAATCGc > 3:37979/1‑151 (MQ=14) ttttGGGTATAGCGTCGTGGACAGTCATTAAT‑CTTTCTGCCCCTCCAAAAGCAAAAAACCGCCG‑AAGCGG‑GTTTTTAAGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCaaaagcg > 4:561900/1‑145 (MQ=255) tttGGGTCTAGGGTCGTGGAGATTCATTCAT‑CTTTCTGCCCCTCCAAAAGCAAAAACCCGCGG‑AAGCGG‑TTTTTTACGTAAATCAGGTGAAACTGACATATAAGGCGTGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTc < 6:554303/150‑1 (MQ=18) tttGGGTATAGGGTCGTGGACAGTCATTCAT‑CTTTCTGCCCCTCCAAAAGCAAAAACCGGCGG‑AAGGGG‑GTTTTTACGTAATTCTGGTGAAACTGACCGATAAGCCGGGTTGTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTc < 5:239244/150‑1 (MQ=18) tGGGTATAGCGTCGTGGGCAGTCATTCAT‑CTTTCTGCCCCTCCAAAAGCAAAAAACCGCCG‑AAGCGG‑GTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGCCAGTCATTCATCTAGGCCAGCAATCGCTCACt > 5:458489/1‑151 (MQ=255) gggTATAGCGTCGTGGACAGTCATTCAT‑CTTTTTGCCCCCCAAAAACCAAAAACCCCCCC‑AACCGG‑GTTTTTACGTAAAAAAGGGGAAACTGCCCGAAAACCCGGGTTCTTGCGGGGCCCGTCATTAATCTAGGCACCCAATCGGGCACTg > 5:1268436/1‑151 (MQ=9) ggTATAGCGTCGTGGCCAGTCATTCAT‑CTTTGTGCCCCGCCAAAACCAAAAAACCCCCC‑AACCGG‑GGTTTTACGTAAATAACGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGCCAGTCATTCATCTAGGCCAGCAATCGCTACCTgg > 6:1409351/1‑151 (MQ=255) gTATAGCGTCGTGGACAGTCATTCAT‑CTTTCTGCCCCTCCAAAAGCAAAAACCCGCCG‑AAGCGG‑GTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGCCAGTCATTCATCTAGGCCAGCAATCGCTCACTGGc > 5:1511693/1‑151 (MQ=255) ataGGGTCTTGTAGAGTCATTCAT‑CTTTCTGCCCCTCCATAAGCAAAATCCCTGCC‑TAGCTG‑CGTTTTACTTAAAGCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTc < 5:1387000/151‑1 (MQ=21) aGCGTCGTCGATAGTCATTCAT‑CTTTCTGCCCCTCCAACAGCAAAAACCCGCCT‑AAGCTG‑GTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCaa < 5:1542094/151‑1 (MQ=255) cgtcgtGGACAGTCATTCAT‑CTTTCTGCCCCTCCAAAAGCAAAAACCCGCCG‑AAGCGG‑GTTTTTACGTAAATCAGGTGAAACTGCCCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAagc > 8:1697031/1‑151 (MQ=255) gtcgtGGACAGTCATTCAT‑CTTTCTGCCCCTCCAAAAGCAAAAACCCGCCG‑AAGCGG‑GTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAagc > 7:1080614/1‑150 (MQ=255) gcgtGGACAGTCATTCAT‑CTTTCTGCCCCTCCAAAAGCAAACACCCGCCG‑AAGCGG‑GTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAagcag < 5:95580/150‑1 (MQ=255) cgtGGACAGTCTTTCTT‑CTTTCAGACCCTCCAAAAGCAAAAACCCGCCG‑AAGCGG‑GTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAagcag < 1:494605/150‑1 (MQ=255) gtGGACAGTCATTCAT‑CTTTCTGCCCCTCCAAAAGCAAAAACCCGCCG‑AAGCGG‑GTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGcc > 3:206612/1‑151 (MQ=255) tGGACAGTCATTCAT‑CTTTCTGCCCCTCCAAAAGCAAAAACCCGCCG‑AAGCGG‑GTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTAAAGCAGCCt > 4:974396/1‑151 (MQ=255) tGGACAGTCATTCAT‑CTTTCTGCCCCTCCAAAAGAAAAAACCCGCCG‑AAGCGG‑GTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGCGTTCTGTGGTGGATAGTCTGTGAGCTAGGCCTGCAAGATCTCACTGGCTCAaccacaa > 7:921564/1‑147 (MQ=14) tgACATTCATTAAT‑CTTTCTGGACCTCCAAAAGCAAAAACCCGCCG‑AAGCGG‑GTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCt < 3:1013452/149‑1 (MQ=255) gtaCAGTCATTCAT‑CTTTCTGCCCCTCCAAAAGCAAAACCGCGCCG‑AAGCGT‑GTTTTTACGTAATGCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCt < 7:1475879/148‑1 (MQ=25) gACAGTCATTCAT‑CTTTCTGCCCCTCCAAAAGCAAAAACCCGCCG‑AAGCGG‑GTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTAc > 3:1334557/1‑151 (MQ=255) aCAGTCATTCAT‑CTTTCTGCCCCTCCAAAAGCAAAAACCCGCCG‑AAGCGG‑GTTTTTACGTAAATCAGGTGAAACTGCCCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCCAGCAGCCTAcc > 8:1812358/1‑151 (MQ=255) aCAGTCATTCAT‑CTTTCTGCCCCTCCAAAAGCAAAAACCCGCCG‑AAGCGG‑GTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTAcc > 4:1763942/1‑151 (MQ=255) | GCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCAT‑CTTTCTGCCCCTCCAAAAGCAAAAACCCGCCG‑AAGCGG‑GTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAAGCAGCCTACC > NC_000913/3270009‑3270301 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |