Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,606,1920GC26.0% 175.5 / 17.9 103intergenic (‑27/+8)leuV/leuPtRNA‑Leu/tRNA‑Leu
Reads supporting (aligned to +/- strand):  ref base G (19/52);  new base C (0/25);  total (19/84)
Fisher's exact test for biased strand distribution p-value = 2.53e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 105 total aligned reads displayed.

AAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCC  >  NC_000913/4606042‑4606340
                                                                                                                                                       |                                                                                                                                                    
aaaTCAAGGAACAAACAATAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCg                                                                                                                                                      <  8:31062/151‑1 (MQ=255)
aaaTCAAGCAACAAACAAAAAAGCAAGTAATGATAATTGGGGGGC‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCg                                                                                                                                                      <  7:1775086/151‑1 (MQ=21)
 aatcacgcaccaaaaaaCAACGGAAGAAAAGATATTTGGTCCGT‑GGGGGGGGCATTCAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGc                                                                                                                                                     <  1:403466/140‑1 (MQ=18)
 aaTCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGc                                                                                                                                                     <  8:105007/151‑1 (MQ=255)
  aTCAAGTAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGcc                                                                                                                                                    <  7:432679/151‑1 (MQ=255)
  aTCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGcc                                                                                                                                                    <  1:1080737/151‑1 (MQ=255)
  aTCAAGGAAGAAACAAGAAAGGAAGTAAACAAAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACTTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGcc                                                                                                                                                    <  1:1230116/151‑1 (MQ=255)
   acaagcaagAAACAACAAAGGAAGTAAAGATAATTGTGGCGC‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCt                                                                                                                                                   <  5:1287573/150‑1 (MQ=255)
    caagcaagAAACAAGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTc                                                                                                                                                  <  1:935640/151‑1 (MQ=255)
    cAAGGAAGAAACAAGAAAGTAAGTAAATATAATTGGTGCTA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCt                                                                                                                                                   <  2:1720985/150‑1 (MQ=255)
    cAAGGAAGAAACAAGAAAGCACGTAACGATAATTGGGGCGC‑GGGGGGGGACTGGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTc                                                                                                                                                  <  7:1742265/151‑1 (MQ=21)
    aaaGGAAGAAACAAGAAAGGAAGTAACCATAATGGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTc                                                                                                                                                  <  5:1691040/150‑1 (MQ=255)
    aaaGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTc                                                                                                                                                  <  6:1356115/150‑1 (MQ=255)
      aGGAAAAAAAAAGAAAGGAAGTAAACTTAATTGGGGCGC‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGt                                                                                                                                                <  6:564574/151‑1 (MQ=21)
       ggAACAAACAAGAAAGGAAGTAAATATAATTGGTGCGC‑GGGGGGGCACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGtt                                                                                                                                               <  6:1465823/151‑1 (MQ=255)
       gcaacaaaCAAGAAACGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGtt                                                                                                                                               <  1:1260995/146‑1 (MQ=255)
        gaagaaACAAGAAAGGAAGTAAAGATTATTGGTGCGA‑GGGGGGGGACTTGACCCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGttt                                                                                                                                              <  7:1307026/151‑1 (MQ=255)
         aatcaccAAGACTGGAATTAAAGATAATTGCTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTg                                                                                                                                             <  3:912914/145‑1 (MQ=21)
         aagaaACAAGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAACGAGCCTAACAGCTCACGCGAGCGCGGCAGCCACTCCCGCGACGTGCGCCCGGTGAGCGGACTTTTTTTGATATAGCGTCggggg                                                                                                                                             >  5:1327351/1‑147 (MQ=12)
           gaaAAAATAATGGAAGTAAAGTTATTTGGTGGGT‑GGGGGGGCAGTTGACCCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGt                                                                                                                                           <  7:291144/151‑1 (MQ=18)
           aaaaCAACAAAGCAAGTAAAGATAATTGGGGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGt                                                                                                                                           <  6:590680/150‑1 (MQ=255)
            aaaCAAGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGCACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTg                                                                                                                                          <  8:679104/151‑1 (MQ=255)
             aaCAAGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGc                                                                                                                                         <  7:370441/151‑1 (MQ=255)
             aaCAAGAAACCAAGTAAAGAAAATTGCTGCGA‑GGGGGGGGACTTCAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGc                                                                                                                                         <  4:1550628/151‑1 (MQ=255)
              acaacaAAGGAAGTAAAGATAATTGGTGCGC‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCg                                                                                                                                        <  5:1723969/151‑1 (MQ=255)
               caacaaAGGAAGTAAAGAAAATTGGTGCGA‑GGGGGGGCACTTGACCCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGa                                                                                                                                       <  4:1838020/151‑1 (MQ=255)
                aaGAAAGGAAGTAAATATAATTGGTGCGA‑GGGGGGGCACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAg                                                                                                                                      <  2:326537/151‑1 (MQ=255)
                aaGAAAGCAATTAAAGATAATTGGTGCGC‑GGGGGGGGACTTGACCCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAg                                                                                                                                      <  2:1360771/151‑1 (MQ=255)
                 aGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAgg                                                                                                                                     <  8:103368/151‑1 (MQ=255)
                 aGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTAAAGCTAGAGCGTCTCCAAATTCCGCCACCTTCGCACAATAATCTTAATATAATTGATATCGGATGGTTTAGTGCTAgg                                                                                                                                     >  2:1043301/1‑151 (MQ=17)
                  gAAAGGAAGTAAAGATAATTGGGGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAggg                                                                                                                                    <  6:38240/151‑1 (MQ=255)
                   aaaGGTAGTAAATATAATTGGTGCGT‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACTAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAggg                                                                                                                                    <  6:1177057/150‑1 (MQ=255)
                      ggAAGAAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAggggggg                                                                                                                                <  2:741618/151‑1 (MQ=255)
                      cgAAGTAAACATAATTGGGGCGA‑GGGGGGGGACTTGACCCCCCACGGCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAggggggg                                                                                                                                <  5:1064035/150‑1 (MQ=255)
                         aGTAAACATAATTGGTGCGA‑GGGGGGGGACTTGCACCCCCCCGTCCGTAACGACACTAACACCTGAAGCTCGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGAc                                                                                                                             <  7:804532/151‑1 (MQ=255)
                           tAAAAAAAATTGGGGCCAGGGGGGGGGCCTTCAACCCCCACGTCCGTAACGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGAc                                                                                                                             <  1:1563851/150‑1 (MQ=21)
                            aaacacaaTTGGTGCGT‑GGGGGGGGCCTTGAACCCCCACGTCCTTAAGGAGACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTg                                                                                                                          <  6:1433732/145‑1 (MQ=21)
                             aataTAATTGGTGCGA‑TGGGGGGGACTTGAACCCCCACGTGCGTAATTACACTAACACCTGATGCTACCGCGTCTACGAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGAAATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGa                                                                                                                         <  5:1414114/148‑1 (MQ=21)
                               aaaaaTTGGGGCGA‑GGGGGGTTCCTACAACCCCCACGGCCGTAACGACACTACCACCTGAAGCTAGCCCGTCTACCAATTCCGCCACCTTAGCACACTCAACTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAAc                                                                                                                       <  5:1045728/148‑1 (MQ=21)
                                     tGGTGCCA‑GGGGGTGTACTTCAACCGGCACTTCCTTATCTTCACTAACACATGAAGCTAGAGCTTCTAGCAATTCCGCCACCTTACCACAGTCACCTAACATTTTTTGATATCCCCTCCTTTGGTGCGAGGGGGGGGACTTGAACCCCCa                                                                                                                  <  7:981726/150‑1 (MQ=16)
                                     tGGGGCGA‑GGGCGGGGACTTCACCCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCATCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCa                                                                                                                  <  7:596195/150‑1 (MQ=255)
                                      tggggcttgggggtggACTTGCACCCCCACGTCCGTAATGACACTAACACCTGAAGCTCCCGCGTCTACCAATTCCGCCACCTTCCCTCACTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCa                                                                                                                  <  8:584461/142‑1 (MQ=21)
                                        ggCGT‑GGGGGGGGCCTTCCACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTc                                                                                                              <  5:1032225/150‑1 (MQ=255)
                                        ggCGA‑GCGCGGGTACTAGAACCCCCCCGGCCGTAACTACACTAACACCTGAAGCTACCCCTTCTACCAAATCCGCCACCTTACCACACGCAACATACTATTTTTGATATCCCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTc                                                                                                              <  1:808735/150‑1 (MQ=16)
                                           cgttggggtggCCTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCg                                                                                                            <  6:926622/147‑1 (MQ=255)
                                            atgctgtttccctacaaCCCCCCCGGCCTTTATTACATTAACACCTGCCGCTTCCCCTTATACCAATTCCGCCACCAACAAACACTCATCAAACTTTTTTGGATATACCCTCTTTTGGGGCGCGGGGGGGGACTTGAACCCCCACGTCCGt                                                                                                           <  3:1292952/136‑1 (MQ=255)
                                                   gtcaCTTAACCCCCCACGGCCGTTAGTACACTAAAACATGATGCTAGCGCGTCTACCAATTCCGCCACCTTCTCACAGTCATCTTACTTTTTTTTATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAac                                                                                                     <  3:1633786/147‑1 (MQ=37)
                                                      ccttcccccccccCGGGCGTAATGACAGTAACACCTGACGCTACCGCGTATAACAAATCCGCCACCTACGAACAGTCATCAAACTTTTTTGGATATCCCCTCGTTTGGTGCGAGGGGGGGGACTTCAACCCCCACGTCCGTAAGAACACTa                                                                                                 <  7:1199537/144‑1 (MQ=19)
                                                      ccttccaCCCCCACGGCCCTAAGGACACTAAACCCTGAAGCTATCGCGTATACCAATTCCGCCACCTTCCCACATTCATCTTACTTTTTTTGATATCCCCTCTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTa                                                                                                 <  2:328725/145‑1 (MQ=25)
                                                             ccccccCGGCCGTAATTACACGAAAACCTGACGATAGCGCGTCTTCCAATTCCGGCACCTTCCCACAGGCATCAAACTTTTTTTGATATCCCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTg                                                                                          <  8:1800124/151‑1 (MQ=21)
                                                             cccccACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCa                                                                                                                  >  5:257292/1‑127 (MQ=255)
                                                             cccccACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCa                                                                                                                  <  2:257650/127‑1 (MQ=255)
                                                                gcACGTCCTTAATTTCAGTAAAACCTGAAGATATCGCGTATACCAATTCCGCGACCTAATAACAGGCATCTTACAATATTTGATATACCCTCTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAg                                                                                       <  7:511632/150‑1 (MQ=12)
                                                                   cggccgatagtacacTAACACATGAAGCTAGAGCTTATAGCAATTCCGCCACCTTCCCACATTCATCATACTTTTTTTGATATCCCCTCCTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTa                                                                                    <  7:158142/140‑1 (MQ=21)
                                                                    gTCCGTAGGGACTCTACCACCTGAGGGTCCGGCTCCTACCAATTCCGCCACCAAACAACATGCATCTAACTTTTTTTGATATCCCGTTTTTTGGTGCGCGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAg                                                                                   <  5:765942/151‑1 (MQ=12)
                                                                       cgaaaGGACACTAACACCTGATGCAAGCGCGTCTACCAAATCCGCCAACTAACAACATGCATCTAACTTTTTTTGATATCCCCTCTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAgcgc                                                                                <  7:1205572/148‑1 (MQ=18)
                                                                           agtacacTAACACCTGAAGCTATCGATTATAACAATTCCGCCACCAACCCACAGTCATCTAACTTTTTTTGATATCCCCTCTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCt                                                                            <  5:528679/148‑1 (MQ=21)
                                                                              acacTATCACCTTCAGGTAGAGATTCTACAATTTCCGGCACCTTCCAACAGTCATCTTACTTTTTTTGATTTCGCCTCTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTAc                                                                          <  8:902557/150‑1 (MQ=18)
                                                                              acacTACCACCTGAAGCTCGCGCTTCTACCAATTCCGCCCCGTTCCCACAGTCAAGTTACTTTTTTTGATATCGCCTCGTTTGGTGCGCGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTAcc                                                                         <  5:252437/151‑1 (MQ=25)
                                                                              acacTAACACATGAAGCTACCTCGTCTACGAATTCCGGCACCTTCGCACAGTCATCTTACTTTTTTGGATCTCCCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTAcc                                                                         <  1:227730/151‑1 (MQ=25)
                                                                                     cacgcgccgtacgcgcGTCTATCAATCCCGGCACCTCCCCCCATGAACTTTACTATTTTTGATTTGCCCTTTTGGGGGGGGGGGGGGGGCAGTCCACCCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCg                                                                  <  5:1802456/139‑1 (MQ=2)
                                                                                                  acatgatattaaTTCCGGCACCAAACCACACGCATCAAACTTTATTGGATCTCCCCTTCTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCa                                                     <  6:251357/141‑1 (MQ=11)
                                                                                                    cgTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAaca                                                                                              <  1:1215191/108‑1 (MQ=255)
                                                                                                    agtcttagaaTTCCGCCACGAACATACATTCATCTTACAATTTTTATTTTCTCCTGATTTGGTGCGTGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAg                                                    <  5:333561/142‑1 (MQ=14)
                                                                                                      taatctaaTTCCGCCACCAAAAAACAGGCAACAAACTATTTTTGATTTACCCTTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTg                                                  <  7:540356/144‑1 (MQ=11)
                                                                                                      aatACAAAATCCGCCACCTACCCACACCCATGTAAATTTTATTGAATTACCCTTTTTTGGTGCGTGGGGGGTGACTTGACCCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTg                                                  <  5:835377/148‑1 (MQ=9)
                                                                                                       atACCAATTCCGCCACCTAACAACAGGCATCTAACTTTTTTTGATATCCCCTCTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGc                                                 <  7:1213259/149‑1 (MQ=18)
                                                                                                          ccAATTCCGCCACCTTCGCACAGTCAGATTACTTTTTTTGATATCGCCGCGGTGGGTGCGAGTGGGGGGACTTGAACCCCCACGTCCGTAAGTACAGAAACACATCAAGCTAGCGCGTCTACCAATTTCGCCCCCTTcccacccctgcacg                                             >  5:1674854/1‑138 (MQ=18)
                                                                                                          acAATGCCGCCACCAACACACAGGCATCAAACTTTTATTGAACTCCCCTCCTTTGGGGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGc                                             <  5:514560/150‑1 (MQ=17)
                                                                                                             aTTCCGCCACCTTCGCACAGTCATATTACTTTTTTTGATATCGACTCGTTTGGTGCGAGGGGGGGGACTTGAACCACCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACAAATTCCGACACCTTCGcaaagagacagaaat                                          >  3:1455598/1‑137 (MQ=18)
                                                                                                             aTTCCGCCACCTAACAACAGCCAACAAACATTTTTGGAACTCGCCTCCTTTGGGGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAat                                          <  7:1744955/151‑1 (MQ=17)
                                                                                                              ttCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGCCCCCCCACGTCCGTAAGCACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCGAGTGGGAGCactt                                         >  5:96312/1‑148 (MQ=21)
                                                                                                                ccGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCacgagcaattatta                                        >  2:1453423/1‑137 (MQ=255)
                                                                                                                 cGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGCACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCACTGCGAGCAatata                                       >  5:1016673/1‑149 (MQ=255)
                                                                                                                  gccaggataaaacaGTGATGTTACATTAATTGAAATACCGTCTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCaa                                     <  6:985482/140‑1 (MQ=14)
                                                                                                                  gCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCa                                      >  5:1031950/1‑150 (MQ=255)
                                                                                                                    cagcttcaggcaatCATCTTACATTTTTTGATGTCGCGAAGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACg                                   <  6:934476/138‑1 (MQ=18)
                                                                                                                    cACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACACAGACAGCAATATaaa                                     >  7:589339/1‑149 (MQ=18)
                                                                                                                       cTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCACAGCCAGCTATAAAAACgagt                                >  6:207531/1‑148 (MQ=18)
                                                                                                                         acaatcactgatcaaaCTTGTATTGAAGTCCCCTCTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGtt                              <  8:1280844/136‑1 (MQ=17)
                                                                                                                          acctcattcaacatACTTTTATTGATATCGCTTTGTTTGGTGCGCGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGttt                             <  2:83961/138‑1 (MQ=18)
                                                                                                                            cacatgcATCTTAATTTTATTTATTTACCCTTTTTTGGTGCGTGGGGGGGTACTTGAACCCCCACGTCCGTAAGCACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGttttt                           <  3:702990/145‑1 (MQ=17)
                                                                                                                            cacaGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGACAGAGCAATATaaaagattttgtt                           >  5:185120/1‑141 (MQ=18)
                                                                                                                            aacattgaTCATACTTTATTTGATATACAGTTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGttttt                           <  3:831570/144‑1 (MQ=17)
                                                                                                                             acatgcATCTAACTTTTTTTGATTTATCGTTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGTACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTg                          <  2:338030/146‑1 (MQ=17)
                                                                                                                             acacgcaagttACATGTTATGATCTCCCCTTCTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTg                          <  8:705141/142‑1 (MQ=17)
                                                                                                                              caGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCAAGAGACAGGAATATaaaagactttttagc                         >  7:889688/1‑139 (MQ=18)
                                                                                                                               aggcaacaaaCTATTATTGATATACACTAGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGt                        <  1:392638/142‑1 (MQ=18)
                                                                                                                               aGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGAGGTTTTTgct                        >  5:727655/1‑149 (MQ=255)
                                                                                                                                 tgaTCTTACTTTTATTGATTTATAGTTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTg                       <  2:267847/148‑1 (MQ=18)
                                                                                                                                 tCATTTAACTATATTTGATTTCACGTTCTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGCACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTg                       <  8:1172844/150‑1 (MQ=17)
                                                                                                                                  cATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCACACCCACCAATATCAAAGTAGTTATTgctccg                     >  2:386825/1‑146 (MQ=18)
                                                                                                                                  aaTCTAACTTTTTTTCATATCCCCTCTTTGGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCg                     <  5:1420259/150‑1 (MQ=255)
                                                                                                                                   aTCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTGCCAGCAATATAAACGTGGTTTTTCGTggg                     >  5:1008176/1‑148 (MQ=255)
                                                                                                                                    tCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCAAGAGAGAGCACTAAAAAAGAGGTTGTTGCTggg                     >  7:1165198/1‑147 (MQ=17)
                                                                                                                                    agaaaCTTTATTTGATGTAGCGTTTTTTGGTGCGTGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAg                   <  4:1490369/147‑1 (MQ=18)
                                                                                                                                      ttACATTTTTTGATTTCTATTTTTTTGGTGCGAGGGGGGGTACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAgg                  <  2:671174/150‑1 (MQ=18)
                                                                                                                                       aaCTTTTTTTGATATATCCTGTTTTGTTGCGGGGGTTGGGACTTTAACCCCCAAGTCCGTAAGAACACTAACTCATGAAGCTTGCTCGTCTACCAATTCGGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGTTTTTTGGTGCGAgggg                <  5:1364670/150‑1 (MQ=255)
                                                                                                                                        aattttttttATATATACTAGTTGGGGGCGAGGGGGGGGACTTTACCCCCCACGTCGGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCTCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAggggg               <  3:1613218/149‑1 (MQ=18)
                                                                                                                                                     tCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCGAGACGGAGGAATATAAAAGTGTTTTTTGGTGCGAGGGGGGGGagtggcgccc  >  5:1156330/1‑142 (MQ=17)
                                                                                                                                                       |                                                                                                                                                    
AAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCC  >  NC_000913/4606042‑4606340

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑