| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,708,862 | 0 | C | A | 24.5% | 225.4 / 12.8 | 163 | V648V (GTC→GTA) | rsxC | SoxR iron‑sulfur cluster reduction factor component; putative membrane‑associated NADH oxidoreductase of electron transport complex |
| Reads supporting (aligned to +/- strand): ref base C (84/30); new base A (37/0); total (130/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.19e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 169 total aligned reads displayed.
CAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAG > NC_000913/1708712‑1709012 | ggAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTAGATCCGCGCAAAGAGAACGTAAGAGCCTCTATTACCCAAACCAAATAACGAAAACTGTAAAAGAAACAGGATAAAGAATAAAAATAAAAACAGGTCGATCCGCGGAAAgcg > 4:1594549/1‑150 (MQ=2) aaCAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGAGCGCACGCCAGCAAACCCGACCAGCACCAGGATCAACCCGAGCAAGAACACAAGGTACCTCCTCGCaaatcagc > 8:383444/1‑146 (MQ=2) cAGCAACATGCTATTGCTTAACAATAAGATAATCTCTTTCCGTGCAATTCCGTCTTCGTATCTGCTATTGCCCGTGCCAAAGCTCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGccgccg < 4:548488/151‑1 (MQ=2) cacacgCGGACGCAGCAGAACATGCCGATCCGCGCAAACCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCTCGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGc < 3:1138748/146‑1 (MQ=11) aatgacgAACAAGCACAACAGGTATATCCTCGCATAGCCTCTGTCGAAGTAGCTATTGCCCGTGCCAAAGCTCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTa < 4:71177/145‑1 (MQ=11) aaTGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTGGACGCGGCTATTGCCCGAGCGAAGGCCAGCAACCGCGAACAGCACCAGGCTGATCCCGAGCCCGAACAGCAGGCGGATCCGCGCAACTCTGCAGTCGACGCCGCt > 1:1105714/1‑150 (MQ=9) aaTGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTGGAACAGCAACCGGCTAATGCCTCCGCGGAACACCAGGCCGCTCCGCGCAAGTCAGCCGTCGAAGCCGcgt > 6:415272/1‑149 (MQ=14) attatgAAGCAGAACAAGTGGTCGATCCTCGTAAATCAGCCGTCGAAGCAGCTATTGCCCGGGCCAAAGCTCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTAt < 2:278805/146‑1 (MQ=11) aTGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCAGTTGACGCCGCTATTGCCCGCGCGAAAGCAAGCAACCCCGACCAGCAACAGGCTCAACCCGACGCAGAAACAAAGGTAGATCCGCGCTAAGCACCAGTCTCAGCCGCGAt > 8:427398/1‑151 (MQ=2) tGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGGGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAGCACGCCACAGCACAACACGGAGCTCCCCGCAACGCTCACGTCGAcgccgcactt > 8:267516/1‑147 (MQ=2) ccAGAAGAACAGGTCGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGAGCAAAAGAACTCAAAATAGAAAAGAAAAAGGCTAATGCGGAGCCAGAAGAACAGCTAGATCCGCGCAAAGCAGCAGTAGAAGAAGCTATTGCCCgcg > 7:468234/1‑149 (MQ=2) gaagaaCAGGTCGATCCGCGCAAAGCCGCCGTCGAATCCGCTATTGCCCGTGCCAAACCCCCCAAGCTGGACCAGCTACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCCGTCGGAGCCGCtctggcgcgcgcac > 8:660065/1‑138 (MQ=14) ccaccacctcccaccGCCCAAACCCGCCGTCGAAGCATCTATTTACCGAGCCAAAGCCCGCAATCTCGAAAAGCATCTGGCTAATGAGTTCACAGATCACCAGGTCGCTCCTCGCAAACCCGCCGTCGAAGCCGCTATTGCCCGAGCCaaa < 6:1066565/138‑1 (MQ=2) ggTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAgcgcgc > 3:521178/1‑151 (MQ=255) cacccGCGCAAACCCGCCGTCGAAGCCGCTATTTCATTTTCAAAACCACGAAAGCATCACCACCAACCAGCTAATTCTGAACCTCACAACCCGGGCGATCCGATCAAACCAGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAAc < 3:593609/148‑1 (MQ=2) aTCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGGGCCAAAGCACGCTAGGTGGAGCAGCACGCGGCTAAGGAGGCGCCAGACCTAAACGGGGATGCGCGCTAATCCGGCGTAGAAGCCGCTATTGGCGGCGCCCAGgcgcgcgcggg > 1:759301/1‑146 (MQ=2) aaaGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGACCCAGAAGAACAGGTAGATCCTCGCAAAGCAGCAGTAGCAGCCGCTATTGCACGAGCAAAAGCAAGAAAACGCGAACAGc > 7:53876/1‑151 (MQ=11) aaGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGCCGCGGCTATTGCCCGCGCGCACGCGCGCAAGCGCGCACAGc > 5:35749/1‑150 (MQ=14) gccgccGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCAGTAGCAGCCGCTATTGCCCGCGCAAAAGCAAAAAAACCCGAACAGCaa > 2:1066830/1‑150 (MQ=14) ccgTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCAGTAGACGCCGCTATTGCCCGCGCAAACGCCAGAAAACgcacagcgcaacagcg > 2:1280311/1‑136 (MQ=14) cgTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAAGAACAGGTGGATCCGCGCAAAGCGGCCGTGGAAGCGGCTATTGGAGGGGCCGAGGCTCGGATACGGTAACAGGAAACgggt > 2:1498029/1‑149 (MQ=11) gTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCCGTGGCAGCCGCTATTGCCCGCGCCAAAGCCCGCAAACGCGCCCAGCAGCAGGCtc > 6:1704148/1‑150 (MQ=14) tCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGATAATGCCGAGCCAGAAGAACCGGTAGATCCGCGGAAAGCGGCCGTCGCAGCGGCTATTGCGCGAGCCAAAGCGCGCAAGCGGGAACCGCCACCgggggg > 8:176849/1‑147 (MQ=14) gAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCAGTGGCCGCCGCTATTGCCCGCGCCCAGGCGCGCAAACGGGCACAGCaccagggtcatg > 1:923581/1‑140 (MQ=14) gAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAACCAGAAGAACAGGTAGATCCGCGCAAAGAGCACGTAAAAGCGTCTATTACCCAAACAAAATAGCGAAAACTGGAAAAGAAACAGGGTaa > 5:1388751/1‑149 (MQ=2) gCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAAAAGACTAAAGACGAGCCAGAACAACAGGTCGATACGCGAAAAGCCGCAGTCGAAGCCGCTATTGCCCGATCCAAAGCGCGCAAACGGGAACAGCAACCGGCGATTGCgg > 7:525911/1‑151 (MQ=17) ccGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGACGCGGCTATTGCCCGCGCGAAGGCCCGCAAACGGGCCCAGCACCAGGCTCATGCgg > 1:1432956/1‑150 (MQ=14) ccGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGCGACAAATCACGCAACCGGGAACAACAACAGGCTAATgatgt > 4:1198224/1‑147 (MQ=11) gCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAAGAACAGGTAGATCCGCGCAAAGCCGCCGTAGAAGCGGCTATTGCCCGAGCGCAAGCCAGAAAACGGGACCAGCACCAGGGTCTTGCGGAGc > 6:258754/1‑151 (MQ=14) gCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGACCAGCCCCCGGCTAATGCGgcgc > 8:72232/1‑151 (MQ=255) cTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCAGCAGTAGAAGCCGCTATTGCCCGCGCAAAAGCGAAAAAACCCGAACAGCAGCAGGATAAATCGGaac > 7:1163134/1‑148 (MQ=14) tATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAATCCGAAGACCAACCGGATATTGAACAAGCGAAAGCAAGCAATATGGAACAGCAACCGGCGAAtcagtaaaa > 5:1834387/1‑142 (MQ=9) tATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCAGTAGAAGCCGCTATTGCCCGAGCAAAAGCCCGCAAACGGGACCAGCAAAAGGCTAATCCgtaacc > 4:633250/1‑145 (MQ=14) tATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGAGCCAAAGCGAACAACCGAAAACAGAAAGCGACTAATACGGAgac > 4:1581114/1‑148 (MQ=14) ttGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCCGTCGCAGCCGCTATTGGCGGAGCGAAAGCCCGCCATCGGGAACAGCTAGCGGCTCATGCGGTGcc > 8:468020/1‑148 (MQ=17) tGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAAGAAATCGTATCACCGACCAAAGCCGAAATCGAAGACGCTATTGACATAGACAAAGCGCGCAAACTGTAACATAAAAAGGCTAATGCGGAGCCaga > 5:521973/1‑150 (MQ=9) gCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTCGAAGCCGCTCTAGCACCAGCCCAAGCCCGCACACTCCCACAGCAAGAGGCGAATGCGGCGCCagaac > 1:1172239/1‑150 (MQ=14) ccccccgcccccccccGCAAGCGGCAACAGCAACATCCTAATTCCCAGCCACATCACCACGTCGATCCTAGGACAGGGGACTGGCCAGCCGCTGTGGGCGGTTCCAATGCGCGCAACCTGGAACAGCAACCGGCTAATGCGGAGCCagaag < 3:1603167/136‑1 (MQ=255) cccGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCAGTGGACGCCGCTATTGCCCGCGCGAACGCCAGCAAAGGCGCCCAGCACCAGGGTCTTGCGGAGCCcgaagt > 6:426380/1‑150 (MQ=9) cccGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGACGTCGCAGCCGCTCTTGGCGGAGCGAAAGCCCCCCAGCGGGAACAGCTACGGGGTCTTGCGGTTCCaga > 8:928065/1‑148 (MQ=14) cccGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAGCGGGAACCGCACCCGGCTCCTGCGGAGCCagc > 1:229411/1‑147 (MQ=14) gTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGACGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCACCAGGCTGATGCGGAGCCagaagacc > 1:1443855/1‑148 (MQ=14) acgccctcAAGCTGGAACAGCATCAGGCTAACGCGGACGCAGCACATCAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGa < 8:1006531/144‑1 (MQ=14) aaGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTCGAAGCCGCTATTGCCCGCGCCCACGCGCGAAAACGGGAACAGCACCAGGCTAATGCGGAGCCAGAAGTCCAGGTTgc > 6:659423/1‑150 (MQ=14) cACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAATATAAGAAGATATTCCACGAGCCAAAGCGCGGAAGCTGTAAGAGAAAACTGCGAATGCGGAGACAGAAGAAAAAGATGATcc > 2:1762869/1‑151 (MQ=9) gCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCAGTCGCCGCCGCTATTGCCCGCGCGCACGCGCGCAAACGGGACCAGCACCAGGCTCTTCCGGAGCCAGAAGATCacgagcagccgcg > 6:737237/1‑139 (MQ=14) caatctttaaCAGCACCCGCCTAATGCCGAGCCACTCCAAGCGGTCTTTCGGCGATAAGGGGGCTTCGAAGCTGTTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCgcgc < 6:1827115/143‑1 (MQ=2) aaGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTGGCCGCGGCTATTGCCCGAGCGAACGCCAGCAAAGCGGACCAGCACCAGGGTAATGAGCCGGCAGAAGAGCACCGTGCTCCgcgc > 6:1798951/1‑150 (MQ=2) aaGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCAGTAGCAGCGGCTATTGCACCACCCAAAACCCTCAAGGAGGCACAGCAAGAAGCTAATGCGGTACCAGAAGCAGAGCTTgctacgata > 7:767247/1‑142 (MQ=0) aGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCCGTCGCAGCCGCTATTGCCCGCGCCAAAGCCCGCAAACGGGAACAGCAACAGGCTAATCCGGAGGCAGAAGAACAGGTTGAACAGCGCa > 6:1118411/1‑150 (MQ=14) cTGGAACAGCAACAGGCTAATGCCGACCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGaa < 8:1331535/102‑1 (MQ=255) tGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGCTACGCGCAAACCACCAGTCGAAGAAGCTATTACCCGAGACAAAGCAAGAAAACGGGAACAGCAACAGGATAATGAAGAGCCAGAAGAACAGGTTggtgcgggcgaggg > 4:292930/1‑138 (MQ=9) ggAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTAtt > 7:256492/1‑73 (MQ=38) ggAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTAGACGCCGCTATTGCCCGCGCCAAAGCCAACAAACCCGCACAGCACCACGCTAAAGCGTAGACAGAAGAAAAGGTTGATCCGAGAAAAGcg > 5:815967/1‑150 (MQ=9) aaCAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTCGAAGCGGCTATTGCCCGCGCCAAAGCCCGCAAACGGGCACAGCAGCAGGCTATTGCGGAGCCAGAAGAACTCGGTGCTCCGCGCCAAGCtcc > 3:119667/1‑149 (MQ=14) aCAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCAGTCTAAGCCGCTATTGCCCGCGCCAACGCGAGAAAACCGGAACAGCACCAGGCTAATGCGGAGCCAGAAGACCAGGTTGATAAGCGCACAGcgccc > 6:1337701/1‑147 (MQ=14) cAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCCATCCGCGCAAAGCCGCCGTAGAAGCGGCTATTGCCCGAGCGCACGCCACCAAACCGGCACAGCAACAGGCTTAACACGAGCCCGAAGAAGAGGAAGATCCGCCCAAAGATGccc > 1:1522024/1‑150 (MQ=255) aGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGACCAGGTTGATCCGCGCAAAGCTGCCGt > 3:448031/1‑151 (MQ=255) ccAACAGGCTAACTCCCATCCAGAACAACAGGTCGATCCTCGAAATTCAGCCTTCGAAGCCGCTATTTCCCGTGCCAAAGCGCGAAAACTCGAACAGCAACCGCCTAATGGGGATTCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTc < 4:660571/150‑1 (MQ=2) cAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCAGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAGCTAGAACAGCAACCCGGGAATGAGGAGAAAGAAGAACAGGATGATCCGCGAAAAGCTGCCggcc > 5:1640624/1‑148 (MQ=14) cAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGCGCAAAAGCCAAAAAACCCGAACAGCAAACATCTAAAGCGCATCCAGAAGAGAAAGATGATACGCGAAAATCtacagt > 2:919430/1‑144 (MQ=255) aGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAACGCCCGCAAACGCGCCCAGCACCCGGCTAATGCGGAGCCAGAAGACCAGGTTGCTCCGCGCAAAGCGGCCGTGGCAGc > 6:147620/1‑151 (MQ=14) aGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGACGc > 8:544599/1‑151 (MQ=255) cagctaTGCCGAGCCAGAACAAGTGTTTTATCATCTCAACGCGGCCTTCGATTCCTCTATTGCCGGATACAAAGTTGGCATACTGGAAGATCATCCGTTTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCg < 2:1746846/146‑1 (MQ=255) tAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAACCGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCt > 1:327498/1‑151 (MQ=255) tAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCt > 4:82070/1‑151 (MQ=255) acccccGACCCAGAACACCCCGTCGATCCGCGCACACCCGCACGCGACGCCCCTATTGCACGAGCCAACCCTCGCAATCTGTAACCGCAACAGGCTAACGCGGACCCAGAAGAACAGGTCGATCCGCGCTAAGCTGCCGTCGAAGCGGCTa < 1:1107053/147‑1 (MQ=2) aaTGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACACCAACCGGCTAATGCGGACCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGCCGCGGCt > 3:1536187/1‑150 (MQ=255) aTGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGGTATTGAACGCGACACCGCGCGCAAACGGGCACCGCACCCGGCTAATGCGGCGCGAGACGCCGAGGTTGATCCGCGCCTCGCTGCCGGCgccgcgcggtg > 1:1748798/1‑141 (MQ=9) aTGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTCGAAGCGGCTAt > 3:833673/1‑151 (MQ=255) aTGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCATATGAACCCCCCAACGCGCCCAAACCGGCACAGCAACCGGCTACTGCGGACCGAGAAGACGAGGATGATCCGCGCAAGGCTGCCGTCGCAGCgagcgg > 1:1740203/1‑146 (MQ=9) tGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTAtt > 2:891940/1‑151 (MQ=255) cGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACCGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGCTCCGCGCAACGCGGCAGTAGCCGCGGCTATTGcc > 5:1134115/1‑150 (MQ=11) gAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAGCGGGAACAGCAACAGGCTAATGCGGAGCGAGAAGAACAGGTTGATCCGCGCAAAGCGGCCGTGGCCGCGGcgggtgcgc > 3:1265769/1‑143 (MQ=11) gAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGACCAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCAc > 6:1180706/1‑151 (MQ=14) gCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGACGCGGCTATTGCCcgc > 8:1517442/1‑151 (MQ=255) gCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTAGCAGCCGCTATTTCGCAAGCCAAACCGCGAAACATCGAACAGAAACCGGCGACTGCCGATCCAGAAGACCAGGATGATACACGAAAAGCTGCCGTGGCCGCGGCTagggcgcgc > 5:118313/1‑143 (MQ=9) ccAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCAGCGGCTATTGCAcgcg > 3:1643517/1‑151 (MQ=255) ccAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAACGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCAGCGCAAAGCTGCCGTCGAAGAGGCTATTGCAcgcg > 8:864336/1‑151 (MQ=255) ccAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGCGCGAAAGCCCGCAAGCTCGAAACCCAGCCGGCTAATGAAATACCTGAAGAACAAGTTGATCCGAGCAAAGCGGCCGTAGCAGAGGATAATCCAcgcg > 5:1628282/1‑151 (MQ=2) aacaacAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCAGCGGCTATTGCACGCGccc > 6:91722/1‑149 (MQ=14) accccaGCTCGATCCGCGCAAAGCCGCCTTTTAAGCCGCTATTGCCCGCGCCAAAGCGCTCAAACTTGAACATCAACCTTCTAATGCGGTTCCATAATAAGAGGTCGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCaaa < 4:927842/147‑1 (MQ=255) caacaGGTCGATCCGCGCAAAGCCGCCGTCGCAGCCGCTATTGCCCGAGCCAAAGCCCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCGGCCGTAGCCGCGGCTATTGCACGCGCCaacg > 8:829924/1‑149 (MQ=17) caacaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGACGCGGCTATTGCACGCGCCaacg > 1:472559/1‑149 (MQ=255) caacaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGACGCGGCTATTGCACGCGCaaacg > 8:566655/1‑149 (MQ=17) caacaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCCCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATAAGCGCAAATCGGCCGTAGAAGCGGCTATTGCACGCGCGaagg > 5:884614/1‑149 (MQ=14) aacaGGTCGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGCAGCGGCTATTGCACgcgctcacgc > 4:1823690/1‑145 (MQ=14) aacaGGTCGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGCGCAAAAAACCGCAAACGGTAAAAGAAACCGGCTAATGAGGAGACAGAATAAAAGGTTGATCCGCGCAAAGCTGCAATAGAAGCGGCTATTGCACGCGCGAACGc > 2:1767421/1‑151 (MQ=17) acaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCGAAAGCCCGCAAACGGGAACAGCAAACGGATAATCCCCCGGCAGAAGACCAGGTTCATCCGCGAAAAGCGTAGGACGACGGGGCTATTCCACGAGCCAAGGcc > 3:1037095/1‑150 (MQ=9) acaGGTCGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCTATTGCACGCGCCAAAGc > 4:1776684/1‑150 (MQ=255) acaGGTCGATCCGCGCAAAGCCGCAGTCGAAGCCGCTATTGCCCGCGCCAAAGCGAGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATAATCGCAAAGCTGCAGAAGAAGCGCCTAATCCACGCGCAAAAGc > 7:1499533/1‑150 (MQ=17) aGGTCGATCCGCGCAAAGCCGCCGTCGACGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCACCCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTGGACGCGGCTATTGCCCGCGCCACCGCACg > 3:251508/1‑151 (MQ=17) aGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCAAAAGCCAGCAAACGGGAACAGCAACAGGCTAATCCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCTATTGCCCGCGCAAAAGccac > 2:1624700/1‑148 (MQ=14) aGGTCGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGAGCAAAAGCCAGAAAACGCGAACAGCAACAGGCTAATGAGGAGCAAGAAGAACAGGTTGATAAGCCAAAATCACCAGTATAATCGGCTATTGCAcgagaaaacgcac > 4:1409851/1‑139 (MQ=9) ggTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGACCAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCACAGCTGCCGTCGCAGCGGCTATTGCACGCGcccaggccct > 1:94980/1‑142 (MQ=17) tCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCAGCGGCTATTGCCCGCGCCAAcgcacgca > 6:1546194/1‑150 (MQ=255) cGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAATCGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCTATTGCCcgcggctcggcagggcgg > 5:87218/1‑137 (MQ=11) cGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCAGCGCAAAGCTGCCGTGGCCGCGGCTATTGCACGCGCCAAGgcaagcaac > 7:1402533/1‑150 (MQ=17) cGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCTATTGCCCGCGCCACGGCACggagg > 4:466011/1‑147 (MQ=17) cGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCAGCGCAAAGCTGCAGTCGCAGCGGCTATTGCACGCGCCAACGCACGaaac > 6:1035538/1‑150 (MQ=255) | CAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAG > NC_000913/1708712‑1709012 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |