| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,708,880 | 0 | C | A | 27.7% | 277.7 / 35.6 | 184 | A654A (GCC→GCA) | rsxC | SoxR iron‑sulfur cluster reduction factor component; putative membrane‑associated NADH oxidoreductase of electron transport complex |
| Reads supporting (aligned to +/- strand): ref base C (103/30); new base A (49/2); total (152/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.00e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 199 total aligned reads displayed.
ACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCT > NC_000913/1708730‑1709030 | cAGCAACATGCTATTGCTTAACAATAAGATAATCTCTTTCCGTGCAATTCCGTCTTCGTATCTGCTATTGCCCGTGCCAAAGCTCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGccgccg < 4:548488/151‑1 (MQ=2) aGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCGGCAGTGGCAGCGGCTATTGCCCGCGCCCACGCACGCAAGCGCGCCCAGACACCGGCAGATCACGAGGCAGAACACCAGGGAGATCCGCGCAAAGCGGCAGGCGacgg > 1:1307401/1‑148 (MQ=9) tAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTGCCAGAAGAACCCGGGGATGCGCGCACGGCTGCCGTCGAGGCCGcg > 3:616752/1‑150 (MQ=11) aatggggaacttttagaaCTGGTCGTTCCTCGCAATTCAGCTTTAGTAGCCGCTATTGGCTTTGCCAAATCTAGGATGTTGGAAGAGCAACAGGCTAATGCGGATCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTa < 4:679519/137‑1 (MQ=2) aaTGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTGGACGCGGCTATTGCCCGAGCGAAGGCCAGCAACCGCGAACAGCACCAGGCTGATCCCGAGCCCGAACAGCAGGCGGATCCGCGCAACTCTGCAGTCGACGCCGCt > 1:1105714/1‑150 (MQ=9) attatgAAGCAGAACAAGTGGTCGATCCTCGTAAATCAGCCGTCGAAGCAGCTATTGCCCGGGCCAAAGCTCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTAt < 2:278805/146‑1 (MQ=11) tGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGGGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAAGCACGCCACAGCACAACACGGAGCTCCCCGCAACGCTCACGTCGAcgccgcactt > 8:267516/1‑147 (MQ=2) gaagaaCAGGTCGATCCGCGCAAAGCCGCCGTCGAATCCGCTATTGCCCGTGCCAAACCCCCCAAGCTGGACCAGCTACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCCGTCGGAGCCGCtctggcgcgcgcac > 8:660065/1‑138 (MQ=14) agaaCAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCGAAAGCCCGCAAGCTGGAACAGCAACAGGCTAATGCCGTGCCAGAACACCAGGTGGATCCGCGCGAAGCCGCCGTCGACGACGCTATTGCCCgcgcgccg > 3:130840/1‑147 (MQ=11) aGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCAGAGCCAACGGCGGCAAGCGGGAACCGCAACAGGCTAATGCCGCGCCAGAACACCAGGTAGATCCGCGCAACGCGGCCGTCGCAGCGGCGCTGGGCCGAGcccacggggg > 8:490775/1‑143 (MQ=2) aTCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTGGATCCGCGCAAAGCGGCAGTTGACGCCGCTATTGCCCgcgcacacgcccccaaccc > 6:1160198/1‑136 (MQ=14) aTCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGGGCCAAAGCACGCTAGGTGGAGCAGCACGCGGCTAAGGAGGCGCCAGACCTAAACGGGGATGCGCGCTAATCCGGCGTAGAAGCCGCTATTGGCGGCGCCCAGgcgcgcgcggg > 1:759301/1‑146 (MQ=2) accccgaacactcccgTAGAAGCCGCTATGCCCCGTGACAAACCTCGAAAGCTGGCAGATCAACATGATAATTACGACCCAGAACCACAGGGCGATCCTCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACgg < 6:294984/137‑1 (MQ=9) aaGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGCCGCGGCTATTGCCCGCGCGCACGCGCGCAAGCGCGCACAGc > 5:35749/1‑150 (MQ=14) cgccgTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCg < 7:521370/151‑1 (MQ=255) gccgTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCGGCTATTGCCCGAGCGAACGCCCGCAAACGCGAACAGCaccagg > 6:9165/1‑146 (MQ=14) ccgTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACACCAACAGGCTAATGCCGAGCCAGAAGAACAGGAAGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGAGCAAAATCCACAAAACCCGAACAGCAACAGGc > 2:1457442/1‑151 (MQ=11) actgggAATCCGATATATCCCGCGCCAAATCGAGCAACGAGGCACAGCAACAGCCAAATCACGACCCAGAACCACATGGCGATCCCCGCAAACCCGCCGTCGAAGCAGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGc < 1:980469/146‑1 (MQ=255) gAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCAGTGGCCGCCGCTATTGCCCGCGCCCAGGCGCGCAAACGGGCACAGCaccagggtcatg > 1:923581/1‑140 (MQ=14) ccGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGCGACAAATCACGCAACCGGGAACAACAACAGGCTAATgatgt > 4:1198224/1‑147 (MQ=11) gCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGACCAGCCCCCGGCTAATGCGgcgc > 8:72232/1‑151 (MQ=255) cTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCAGCAGTAGAAGCCGCTATTGCCCGCGCAAAAGCGAAAAAACCCGAACAGCAGCAGGATAAATCGGaac > 7:1163134/1‑148 (MQ=14) tATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAATCCGAAGACCAACCGGATATTGAACAAGCGAAAGCAAGCAATATGGAACAGCAACCGGCGAAtcagtaaaa > 5:1834387/1‑142 (MQ=9) tATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCAGTAGAAGCCGCTATTGCCCGAGCAAAAGCCCGCAAACGGGACCAGCAAAAGGCTAATCCgtaacc > 4:633250/1‑145 (MQ=14) tATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGAGCCAAAGCGAACAACCGAAAACAGAAAGCGACTAATACGGAgac > 4:1581114/1‑148 (MQ=14) tGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAAGAAATCGTATCACCGACCAAAGCCGAAATCGAAGACGCTATTGACATAGACAAAGCGCGCAAACTGTAACATAAAAAGGCTAATGCGGAGCCaga > 5:521973/1‑150 (MQ=9) gCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTCGAAGCCGCTCTAGCACCAGCCCAAGCCCGCACACTCCCACAGCAAGAGGCGAATGCGGCGCCagaac > 1:1172239/1‑150 (MQ=14) ccccgctccAAAGCCCGCAAGCTGGAACAGCAACAGGATAATGCGGACCCAGAACAACAGGTCGATCCGAGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCagaag < 4:80002/144‑1 (MQ=11) ccccccgcccccccccGCAAGCGGCAACAGCAACATCCTAATTCCCAGCCACATCACCACGTCGATCCTAGGACAGGGGACTGGCCAGCCGCTGTGGGCGGTTCCAATGCGCGCAACCTGGAACAGCAACCGGCTAATGCGGAGCCagaag < 3:1603167/136‑1 (MQ=255) cccGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGACGTCGCAGCCGCTCTTGGCGGAGCGAAAGCCCCCCAGCGGGAACAGCTACGGGGTCTTGCGGTTCCaga > 8:928065/1‑148 (MQ=14) cccGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAGCGGGAACCGCACCCGGCTCCTGCGGAGCCagc > 1:229411/1‑147 (MQ=14) ccGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGAGCAAAAGCGAGAAAACCCGAAAAGTAACAAGATAATCCGTAGCCagaaga > 6:423486/1‑150 (MQ=14) gTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGACGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCACCAGGCTGATGCGGAGCCagaagacc > 1:1443855/1‑148 (MQ=14) ccAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGCGCGAACGCGAGAAAACGCGACCAGCACAAGGATATTTAGGAGCCAGAAGAACAgg > 8:1467609/1‑150 (MQ=14) acgccctcAAGCTGGAACAGCATCAGGCTAACGCGGACGCAGCACATCAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGa < 8:1006531/144‑1 (MQ=14) aaGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTCGAAGCCGCTATTGCCCGCGCCCACGCGCGAAAACGGGAACAGCACCAGGCTAATGCGGAGCCAGAAGTCCAGGTTgc > 6:659423/1‑150 (MQ=14) cACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAATATAAGAAGATATTCCACGAGCCAAAGCGCGGAAGCTGTAAGAGAAAACTGCGAATGCGGAGACAGAAGAAAAAGATGATcc > 2:1762869/1‑151 (MQ=9) cGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTAGAAGCGGCTATTGCCCGCGCGAAGGCCCACAAAGCCGAACAGCAGAAGGATATTTCGGAGGAAGAAAAACAAGtacataagc > 7:1834547/1‑143 (MQ=2) caatctttaaCAGCACCCGCCTAATGCCGAGCCACTCCAAGCGGTCTTTCGGCGATAAGGGGGCTTCGAAGCTGTTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCgcgc < 6:1827115/143‑1 (MQ=2) aaGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTGGCCGCGGCTATTGCCCGAGCGAACGCCAGCAAAGCGGACCAGCACCAGGGTAATGAGCCGGCAGAAGAGCACCGTGCTCCgcgc > 6:1798951/1‑150 (MQ=2) tGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGCTACGCGCAAACCACCAGTCGAAGAAGCTATTACCCGAGACAAAGCAAGAAAACGGGAACAGCAACAGGATAATGAAGAGCCAGAAGAACAGGTTggtgcgggcgaggg > 4:292930/1‑138 (MQ=9) ggAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTGGCAGCCGCTATTGCCCGCGCAAAAGCCACCAAACGGGAACAGCAACAGGATCATGAGGAGCCAGAAAACCAGGTAGATAcgcctaaatcc > 3:1113355/1‑143 (MQ=9) aaCAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTGGAAGCGGCTATTGCCCGAGCCAAGGCCCGCAAACGGGACCAGCACCAGGCTAAAGCCGAGCCAGAAGAACACGTAGATCACCGCACAGCtcc > 1:1642947/1‑149 (MQ=14) aCAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCAGTCTAAGCCGCTATTGCCCGCGCCAACGCGAGAAAACCGGAACAGCACCAGGCTAATGCGGAGCCAGAAGACCAGGTTGATAAGCGCACAGcgccc > 6:1337701/1‑147 (MQ=14) cAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCCATCCGCGCAAAGCCGCCGTAGAAGCGGCTATTGCCCGAGCGCACGCCACCAAACCGGCACAGCAACAGGCTTAACACGAGCCCGAAGAAGAGGAAGATCCGCCCAAAGATGccc > 1:1522024/1‑150 (MQ=255) aGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGACCAGGTTGATCCGCGCAAAGCTGCCGt > 3:448031/1‑151 (MQ=255) aCAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGACGAGGTTGATCCGCGCAAAGCGGCCGTGGac > 3:1032027/1‑150 (MQ=255) aGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAACGCCCGCAAACGCGCCCAGCACCCGGCTAATGCGGAGCCAGAAGACCAGGTTGCTCCGCGCAAAGCGGCCGTGGCAGc > 6:147620/1‑151 (MQ=14) cagctaTGCCGAGCCAGAACAAGTGTTTTATCATCTCAACGCGGCCTTCGATTCCTCTATTGCCGGATACAAAGTTGGCATACTGGAAGATCATCCGTTTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCg < 2:1746846/146‑1 (MQ=255) gCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGCGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCGGCCGtggccgcgg > 6:1704785/1‑143 (MQ=14) cTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGACCCAGAACGAGAGGTCGAGCCGCCCTCTGCAGCCCTCGCAGCggg > 3:579169/1‑150 (MQ=11) tAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGAGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTCGAAGCGGCt > 8:841752/1‑151 (MQ=255) tAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAACCGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCt > 1:327498/1‑151 (MQ=255) acccccGACCCAGAACACCCCGTCGATCCGCGCACACCCGCACGCGACGCCCCTATTGCACGAGCCAACCCTCGCAATCTGTAACCGCAACAGGCTAACGCGGACCCAGAAGAACAGGTCGATCCGCGCTAAGCTGCCGTCGAAGCGGCTa < 1:1107053/147‑1 (MQ=2) aaTGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACACCAACCGGCTAATGCGGACCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGCCGCGGCt > 3:1536187/1‑150 (MQ=255) aTGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGGTATTGAACGCGACACCGCGCGCAAACGGGCACCGCACCCGGCTAATGCGGCGCGAGACGCCGAGGTTGATCCGCGCCTCGCTGCCGGCgccgcgcggtg > 1:1748798/1‑141 (MQ=9) aTGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCAGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTAGATCCGAACAAAGAAGACGACGAAAAGGCTAt > 4:1777887/1‑151 (MQ=11) cggaaccAGAAGAACAGGTCGATCCGCGCAAAGCAGCCGTCGAAGCCGCTATTAACCGAACCAAATCGAGCAAGCAAAAACAGCAACCTGCTAATGAGGAGGCAGAAGAACACGTAGATAAGCGCAAAGCAGCCGTCGAAGCGGCTAtggg > 2:1110556/6‑148 (MQ=2) cGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACCGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGCTCCGCGCAACGCGGCAGTAGCCGCGGCTATTGcc > 5:1134115/1‑150 (MQ=11) gAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGCAGCGGCTATTGCAc > 5:1546653/1‑151 (MQ=255) gCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTAGCAGCCGCTATTTCGCAAGCCAAACCGCGAAACATCGAACAGAAACCGGCGACTGCCGATCCAGAAGACCAGGATGATACACGAAAAGCTGCCGTGGCCGCGGCTagggcgcgc > 5:118313/1‑143 (MQ=9) ccAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCCCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCATAGCTGCCGAGGAAGCGGCTATTGCCcgcc > 3:1232323/1‑150 (MQ=255) aGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCAGCGCAAAGCTGCAGTCGCAGAGGCTATTCCCCGCGcc > 6:1097229/1‑151 (MQ=14) accccaGCTCGATCCGCGCAAAGCCGCCTTTTAAGCCGCTATTGCCCGCGCCAAAGCGCTCAAACTTGAACATCAACCTTCTAATGCGGTTCCATAATAAGAGGTCGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCaaa < 4:927842/147‑1 (MQ=255) caacaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGACGCGGCTATTGCACGCGCaaacg > 8:566655/1‑149 (MQ=17) caacaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCCCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATAAGCGCAAATCGGCCGTAGAAGCGGCTATTGCACGCGCGaagg > 5:884614/1‑149 (MQ=14) aacaGGTCGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGCAGCGGCTATTGCACgcgctcacgc > 4:1823690/1‑145 (MQ=14) acaGGTCGATCCGCGCAAAGCCGCAGTCGAAGCCGCTATTGCCCGCGCCAAAGCGAGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATAATCGCAAAGCTGCAGAAGAAGCGCCTAATCCACGCGCAAAAGc > 7:1499533/1‑150 (MQ=17) ccgccGATCCGCGCAAAGCCGCCGTCGAAGCAGCTATTGCCCGAGCCAAAGCTCGCAAACTGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACTGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACg < 7:526247/147‑1 (MQ=255) aGGTCGATCCGCGCAAAGCCGCCGTCGACGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCACCCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTGGACGCGGCTATTGCCCGCGCCACCGCACg > 3:251508/1‑151 (MQ=17) aGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCAAAAGCCAGCAAACGGGAACAGCAACAGGCTAATCCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCTATTGCCCGCGCAAAAGccac > 2:1624700/1‑148 (MQ=14) aGGTCGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGAGCAAAAGCCAGAAAACGCGAACAGCAACAGGCTAATGAGGAGCAAGAAGAACAGGTTGATAAGCCAAAATCACCAGTATAATCGGCTATTGCAcgagaaaacgcac > 4:1409851/1‑139 (MQ=9) ggTCGATCCGCGCAAAGCCGCAGTCGAAGCCGCTATTGCCCGAGCAAAAGCAAGAAAGCAGGAACAGCAACAGGCTAATGACGAAACAGAAGAACAGCTTGATCCGCGAAAAGCTGCCGTAGACGCGGCTATTGCCCgcgcgcaggcgca > 5:1631942/1‑141 (MQ=2) tCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCAGCGGCTATTGCCCGCGCCAAcgcacgca > 6:1546194/1‑150 (MQ=255) tCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGACGCGGCTATTGCACGCGCCAAcgcacgca > 8:459112/1‑150 (MQ=255) ccccccccccAAACCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCCCTCTCCATCGAACATAAAGAGGCTTCTCCGGAGCCACAACCACAGGTCTATCGGCGAAAACCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCa < 1:445592/140‑1 (MQ=2) cGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAATCGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCTATTGCCcgcggctcggcagggcgg > 5:87218/1‑137 (MQ=11) cGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCAGCGCAAAGCTGCCGTGGCCGCGGCTATTGCACGCGCCAAGgcaagcaac > 7:1402533/1‑150 (MQ=17) cGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCTATTGCCCGCGCCACGGCACggagg > 4:466011/1‑147 (MQ=17) cGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCAGCGCAAAGCTGCAGTCGCAGCGGCTATTGCACGCGCCAACGCACGaaac > 6:1035538/1‑150 (MQ=255) gATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGc > 6:618325/1‑151 (MQ=255) aTCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCAGCGGCTATTGCACGCGCCAACGCAAGCAAGCt > 2:708219/1‑151 (MQ=255) aTCCGCCCAAACCCGCCGTCGAAGCCGCTATTCGCCGAGCCAAAGCGCGCAAACGGCCACATCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCt < 6:1634600/151‑1 (MQ=25) ccGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTgg > 8:1324632/1‑151 (MQ=255) ccGCGCAAAGCCGCAGTCGAAGCCGCTATTGCCCGAGCCAAAGCAAGCAATCTGGAACAGCAAAAGGCTAAAGCGGAACCAGAAAAACATGTAGATCCGCGAAAAGCAGCAGTAGACGCAGCTATTACACGAGATAAAGCaacaaagcacg > 7:643770/1‑141 (MQ=255) cgcgCAACGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCTCGCAATCTGGAACAGCAACCGGCTAATGCGGATCCAGAAGAACAGGTTGATCCGCGCAAAGCTTCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGa < 3:525725/151‑1 (MQ=14) cgcgCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCCGCGGCTATTGCACGCGCGAAAGCCAGCAAGCTggc > 5:1270063/1‑150 (MQ=255) gcgcAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGAAGCGGCTATTGCACGCGCGAAAGCAAGAAAGcacga > 7:776444/1‑146 (MQ=17) cgcAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCCCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGCCGCGGCTATTGCCCGCGCCAAAGCaacaaagcaggcac > 2:917770/1‑138 (MQ=17) gcAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGGTGGCAc > 1:68299/1‑150 (MQ=255) gcAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGAAGCGGCTATTGCCCGCGCAAAAGCACGCAAGCAGGacc > 2:1776692/1‑148 (MQ=255) gcAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTCGAAGCGGCTATTGCCCGCGCCCATGCACGCAAGCAGGAAc > 6:491516/1‑150 (MQ=255) aaaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGACGCGGCTATTGCACGCGCGAACGCCCGCAAGCTGGACCAGc > 2:200397/1‑151 (MQ=255) aaaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGc > 8:1624000/1‑151 (MQ=255) aaaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCTATTGCACGCGCGAAAGCAAGCAACCTCGAACAGc > 2:1266950/1‑151 (MQ=17) aaaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGGAACAAGAGCACGTGGATCAGCGCAAAGCTGGAGTCGAAGCTGGTATTGCACGAGCCAGCGCACGCAAGATGGAACAGc > 5:667548/1‑151 (MQ=14) cgccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCAGCGGCTATTGCCCGCGCGAACGCCCGCAAGCTGGAACAGCacc > 8:113059/1‑147 (MQ=17) gccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTCGAAGCGGCTATTGCACGCGCCAAAGCCAGCAAGCTCGACCAGCAACAgg > 7:366219/1‑151 (MQ=255) ccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCCCGCAAGCTGGAACAGCACCAggg > 3:115995/1‑150 (MQ=255) cgTCGCAGCCGCGACTGCCCGACCCACCGCGCCGCAACCGCAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTGGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCt < 3:1764150/151‑1 (MQ=14) | ACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCT > NC_000913/1708730‑1709030 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |