Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,708,9010AC25.4% 256.3 / 41.4 220R661R (CGA→CGC) rsxCSoxR iron‑sulfur cluster reduction factor component; putative membrane‑associated NADH oxidoreductase of electron transport complex
Reads supporting (aligned to +/- strand):  ref base A (125/34);  new base C (51/3);  total (179/41)
Fisher's exact test for biased strand distribution p-value = 6.61e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 224 total aligned reads displayed.

AGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGA  >  NC_000913/1708757‑1709047
                                                                                                                                                |                                                                                                                                                  
         cGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCGGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGCAGCGCCTATTGCCCGCGCCAAAGCCCGCaa                                                                                                                                      >  4:151597/1‑150 (MQ=14)
          cacccGCGCAAACCCGCCGTCGAAGCCGCTATTTCATTTTCAAAACCACGAAAGCATCACCACCAACCAGCTAATTCTGAACCTCACAACCCGGGCGATCCGATCAAACCAGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAAc                                                                                                                                    <  3:593609/148‑1 (MQ=2)
           aTCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTGGATCCGCGCAAAGCGGCAGTTGACGCCGCTATTGCCCgcgcacacgcccccaaccc                                                                                                                                   >  6:1160198/1‑136 (MQ=14)
                ccccccgcccccGCCGAAGCCGCTATCGCCCGTTTTATTTAACTCATGCTGGAACACCAACAGGCTAATGTCTAGCCATAACAATTTCGCTATACGAGGATATTCGGATTTGAAGCAGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAAc                                                                                                                              <  4:1396016/145‑1 (MQ=255)
                   aaaGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGACCCAGAAGAACAGGTAGATCCTCGCAAAGCAGCAGTAGCAGCCGCTATTGCACGAGCAAAAGCAAGAAAACGCGAACAGc                                                                                                                           >  7:53876/1‑151 (MQ=11)
                      gccgccGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCAGTAGCAGCCGCTATTGCCCGCGCAAAAGCAAAAAAACCCGAACAGCaa                                                                                                                         >  2:1066830/1‑150 (MQ=14)
                         gccgTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCCGTAGCAGCGGCTATTGCCCGCGCGAAAGCCAGAAAACCGGCACAGCAACAgg                                                                                                                     >  4:566376/1‑151 (MQ=14)
                          ccgTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCAGTAGACGCCGCTATTGCCCGCGCAAACGCCAGAAAACgcacagcgcaacagcg                                                                                                                    >  2:1280311/1‑136 (MQ=14)
                          actgggAATCCGATATATCCCGCGCCAAATCGAGCAACGAGGCACAGCAACAGCCAAATCACGACCCAGAACCACATGGCGATCCCCGCAAACCCGCCGTCGAAGCAGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGc                                                                                                                    <  1:980469/146‑1 (MQ=255)
                            gTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCCGTGGCAGCCGCTATTGCCCGCGCCAAAGCCCGCAAACGCGCCCAGCAGCAGGCtc                                                                                                                  >  6:1704148/1‑150 (MQ=14)
                               gAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAACCAGAAGAACAGGTAGATCCGCGCAAAGAGCACGTAAAAGCGTCTATTACCCAAACAAAATAGCGAAAACTGGAAAAGAAACAGGGTaa                                                                                                                 >  5:1388751/1‑149 (MQ=2)
                                   ccGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGACGCGGCTATTGCCCGCGCGAAGGCCCGCAAACGGGCCCAGCACCAGGCTCATGCgg                                                                                                            >  1:1432956/1‑150 (MQ=14)
                                    cGCTATGCCCGGTGCCACCTCACGCAAGGTGGCAGATCAAGAGCCTAATGCCGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAg                                                                                                          <  1:887798/151‑1 (MQ=14)
                                     gCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGACCAGCCCCCGGCTAATGCGgcgc                                                                                                         >  8:72232/1‑151 (MQ=255)
                                      cTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCAGCAGTAGAAGCCGCTATTGCCCGCGCAAAAGCGAAAAAACCCGAACAGCAGCAGGATAAATCGGaac                                                                                                         >  7:1163134/1‑148 (MQ=14)
                                       tATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAATCCGAAGACCAACCGGATATTGAACAAGCGAAAGCAAGCAATATGGAACAGCAACCGGCGAAtcagtaaaa                                                                                                        >  5:1834387/1‑142 (MQ=9)
                                       tATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCAGTAGAAGCCGCTATTGCCCGAGCAAAAGCCCGCAAACGGGACCAGCAAAAGGCTAATCCgtaacc                                                                                                        >  4:633250/1‑145 (MQ=14)
                                       tATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATAACGAAACAGAAACAAAGGTGGAAACACTCAAAGCAAAAGTCTAAGACTCTATTGCCCGAGAAAAATAAAAAAAAATGGAAGAGCAACCGGCTaagggggcgcgc                                                                                                       >  5:1130676/1‑141 (MQ=2)
                                         ttGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCCGTCGCAGCCGCTATTGGCGGAGCGAAAGCCCGCCATCGGGAACAGCTAGCGGCTCATGCGGTGcc                                                                                                        >  8:468020/1‑148 (MQ=17)
                                           gCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTCGAAGCCGCTCTAGCACCAGCCCAAGCCCGCACACTCCCACAGCAAGAGGCGAATGCGGCGCCagaac                                                                                                   >  1:1172239/1‑150 (MQ=14)
                                            cccGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCAGTGGACGCCGCTATTGCCCGCGCGAACGCCAGCAAAGGCGCCCAGCACCAGGGTCTTGCGGAGCCcgaagt                                                                                                  >  6:426380/1‑150 (MQ=9)
                                                  ccAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGCGCGAACGCGAGAAAACGCGACCAGCACAAGGATATTTAGGAGCCAGAAGAACAgg                                                                                             >  8:1467609/1‑150 (MQ=14)
                                                    aaaGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCAGTAGAAGCGGCTATTGCCCGAGCGAAAGCGAAAAAAGGCGAACAGCAACAGGATAAAGAGGAGGCATAAGAACAAGta                                                                                           >  5:360060/1‑149 (MQ=14)
                                                          cGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTAGAAGCGGCTATTGCCCGCGCGAAGGCCCACAAAGCCGAACAGCAGAAGGATATTTCGGAGGAAGAAAAACAAGtacataagc                                                                                    >  7:1834547/1‑143 (MQ=2)
                                                            caatctttaaCAGCACCCGCCTAATGCCGAGCCACTCCAAGCGGTCTTTCGGCGATAAGGGGGCTTCGAAGCTGTTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCgcgc                                                                                  <  6:1827115/143‑1 (MQ=2)
                                                             aaGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTGGCCGCGGCTATTGCCCGAGCGAACGCCAGCAAAGCGGACCAGCACCAGGGTAATGAGCCGGCAGAAGAGCACCGTGCTCCgcgc                                                                                  >  6:1798951/1‑150 (MQ=2)
                                                             aaGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCAGTAGCAGCGGCTATTGCACCACCCAAAACCCTCAAGGAGGCACAGCAAGAAGCTAATGCGGTACCAGAAGCAGAGCTTgctacgata                                                                                  >  7:767247/1‑142 (MQ=0)
                                                                  ggAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTAGACGCCGCTATTGCCCGCGCCAAAGCCAACAAACCCGCACAGCACCACGCTAAAGCGTAGACAGAAGAAAAGGTTGATCCGAGAAAAGcg                                                                            >  5:815967/1‑150 (MQ=9)
                                                                  ggAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTGGCAGCCGCTATTGCCCGCGCAAAAGCCACCAAACGGGAACAGCAACAGGATCATGAGGAGCCAGAAAACCAGGTAGATAcgcctaaatcc                                                                            >  3:1113355/1‑143 (MQ=9)
                                                                    aaCAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTCGAAGCGGCTATTGCCCGCGCCAAAGCCCGCAAACGGGCACAGCAGCAGGCTATTGCGGAGCCAGAAGAACTCGGTGCTCCGCGCCAAGCtcc                                                                          >  3:119667/1‑149 (MQ=14)
                                                                    aaCAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGCGCAAAAGCGAGCAAACGGGAACAGCAACAGGGTAATGCGGAGCCAGAAGAACAGGTTGCTCCGCGCAAAGCTGc                                                                          >  3:153914/1‑151 (MQ=14)
                                                                       aGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGACCAGGTTGATCCGCGCAAAGCTGCCGt                                                                       >  3:448031/1‑151 (MQ=255)
                                                                       aGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGCGCAAAGGCCAGAAAACGCGAACAGCAAAAGGCTAATGCCGAGGCAGAAGTCCAGGTGGATCAGCCGAAAGCTGCTGt                                                                       >  8:1068603/1‑151 (MQ=9)
                                                                         cAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCAGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAGCTAGAACAGCAACCCGGGAATGAGGAGAAAGAAGAACAGGATGATCCGCGAAAAGCTGCCggcc                                                                     >  5:1640624/1‑148 (MQ=14)
                                                                         cAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGCGCAAAAGCCAAAAAACCCGAACAGCAAACATCTAAAGCGCATCCAGAAGAGAAAGATGATACGCGAAAATCtacagt                                                                       >  2:919430/1‑144 (MQ=255)
                                                                          aaCAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGc                                                                                                                           >  1:1472595/1‑96 (MQ=12)
                                                                             aGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAACGCCCGCAAACGCGCCCAGCACCCGGCTAATGCGGAGCCAGAAGACCAGGTTGCTCCGCGCAAAGCGGCCGTGGCAGc                                                                 >  6:147620/1‑151 (MQ=14)
                                                                             aGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGACGc                                                                 >  8:544599/1‑151 (MQ=255)
                                                                              caactacgCCGAGCCAGAACAACATGTCTATCCTCTCAACGCCCCCGGCGAACCCTCTATTCCCCGATACACAGCGCGCAAACCGGAACATCAACCGCCTTATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCg                                                                <  2:1755405/144‑1 (MQ=19)
                                                                                 tAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAACCGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCt                                                             >  1:327498/1‑151 (MQ=255)
                                                                                 tAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCt                                                             >  4:82070/1‑151 (MQ=255)
                                                                                  acccccGACCCAGAACACCCCGTCGATCCGCGCACACCCGCACGCGACGCCCCTATTGCACGAGCCAACCCTCGCAATCTGTAACCGCAACAGGCTAACGCGGACCCAGAAGAACAGGTCGATCCGCGCTAAGCTGCCGTCGAAGCGGCTa                                                            <  1:1107053/147‑1 (MQ=2)
                                                                                   aTGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGGTATTGAACGCGACACCGCGCGCAAACGGGCACCGCACCCGGCTAATGCGGCGCGAGACGCCGAGGTTGATCCGCGCCTCGCTGCCGGCgccgcgcggtg                                                           >  1:1748798/1‑141 (MQ=9)
                                                                                   aTGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCAGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTAGATCCGAACAAAGAAGACGACGAAAAGGCTAt                                                           >  4:1777887/1‑151 (MQ=11)
                                                                                    tGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTAtt                                                          >  2:891940/1‑151 (MQ=255)
                                                                                       cGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTTGAAGCGGCTATTGc                                                        >  5:663850/1‑150 (MQ=255)
                                                                                        gAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAGCGGGAACAGCAACAGGCTAATGCGGAGCGAGAAGAACAGGTTGATCCGCGCAAAGCGGCCGTGGCCGCGGcgggtgcgc                                                      >  3:1265769/1‑143 (MQ=11)
                                                                                         aGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGATGCAGTCGAAGCGGCTATTGCAcg                                                     >  5:872240/1‑151 (MQ=255)
                                                                                          gCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGACGCGGCTATTGCCcgc                                                    >  8:1517442/1‑151 (MQ=255)
                                                                                           ccAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAACGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCAGCGCAAAGCTGCCGTCGAAGAGGCTATTGCAcgcg                                                   >  8:864336/1‑151 (MQ=255)
                                                                                           ccAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGAAGCGGCTATTGCCcgcc                                                   >  5:1145742/1‑150 (MQ=255)
                                                                                           ccAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGCGCGAAAGCCCGCAAGCTCGAAACCCAGCCGGCTAATGAAATACCTGAAGAACAAGTTGATCCGAGCAAAGCGGCCGTAGCAGAGGATAATCCAcgcg                                                   >  5:1628282/1‑151 (MQ=2)
                                                                                             aGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCAGCGCAAAGCTGCAGTCGCAGAGGCTATTCCCCGCGcc                                                 >  6:1097229/1‑151 (MQ=14)
                                                                                              gaaccagacgTCGATCCCCGCACAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTGGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCa                                                <  1:302169/142‑1 (MQ=17)
                                                                                               aacaacAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCAGCGGCTATTGCACGCGccc                                                >  6:91722/1‑149 (MQ=14)
                                                                                                 caacaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGACGCGGCTATTGCACGCGCCaacg                                             >  1:472559/1‑149 (MQ=255)
                                                                                                  aacaGGTCGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGCAGCGGCTATTGCACgcgctcacgc                                            >  4:1823690/1‑145 (MQ=14)
                                                                                                  aacaGGTCGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGCGCAAAAAACCGCAAACGGTAAAAGAAACCGGCTAATGAGGAGACAGAATAAAAGGTTGATCCGCGCAAAGCTGCAATAGAAGCGGCTATTGCACGCGCGAACGc                                            >  2:1767421/1‑151 (MQ=17)
                                                                                                     aGGTCGATCCGCGCAAAGCCGCCGTCGACGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCACCCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTGGACGCGGCTATTGCCCGCGCCACCGCACg                                         >  3:251508/1‑151 (MQ=17)
                                                                                                        tCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCAGCGGCTATTGCCCGCGCCAAcgcacgca                                       >  6:1546194/1‑150 (MQ=255)
                                                                                                         cGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCAGCGCAAAGCTGCCGTGGCCGCGGCTATTGCACGCGCCAAGgcaagcaac                                     >  7:1402533/1‑150 (MQ=17)
                                                                                                         cGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCTATTGCCCGCGCCACGGCACggagg                                     >  4:466011/1‑147 (MQ=17)
                                                                                                         cGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCAGCGCAAAGCTGCAGTCGCAGCGGCTATTGCACGCGCCAACGCACGaaac                                     >  6:1035538/1‑150 (MQ=255)
                                                                                                          gATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGc                                    >  6:618325/1‑151 (MQ=255)
                                                                                                           accctctcAAACCCGCCGTCGAAGACGCTATTGCCCGAGCCAAAGCTCGCAATCGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCt                                   <  2:230800/144‑1 (MQ=21)
                                                                                                           aTCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCAGCGGCTATTGCACGCGCCAACGCAAGCAAGCt                                   >  2:708219/1‑151 (MQ=255)
                                                                                                             ccGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCCGCGGCTATTGCCCGCGCCCAGGCCCGCAAGCtcg                                 >  1:1533799/1‑149 (MQ=17)
                                                                                                             ccGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTgg                                 >  8:1324632/1‑151 (MQ=255)
                                                                                                              cgcgCAACGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCTCGCAATCTGGAACAGCAACCGGCTAATGCGGATCCAGAAGAACAGGTTGATCCGCGCAAAGCTTCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGa                                <  3:525725/151‑1 (MQ=14)
                                                                                                                 gcAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGGTGGCAc                              >  1:68299/1‑150 (MQ=255)
                                                                                                                   aaaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAGGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGACGCGGCTATTGCACGCGCGCAAGCCCGCAAGCTGGAACAGc                           >  5:1195496/1‑151 (MQ=255)
                                                                                                                   aaaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGc                           >  8:1624000/1‑151 (MQ=255)
                                                                                                                   aaaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCAACCAAGCTCGAACAGc                           >  6:1582493/1‑151 (MQ=255)
                                                                                                                   aaaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGACGCGGCTATTGCACGCGCGAAAGCACGAAAGCACGAACAGc                           >  2:1146/1‑151 (MQ=17)
                                                                                                                      cccgcccccccaGCCGCGACCGCCCCCGCCCAAGCGCGCAAGCGGGAACAGCAACATTCTAATGCGGAGCCAGAAGAACACGTGGATCCGCGCACAGCCTCCGTCGAAGCGGCTATTTCACGCGACAAAGCCCGCAAGCTGGAACAGCAAc                        <  8:638588/140‑1 (MQ=255)
                                                                                                                      ccccccttCGAAGCCGCTATTGCCCGATTAAAATCTCGCAATCGGTAACAGCAAAAGTCTAATTCGGAGCCATAAGAACAGGTTGATCAGCGCAAAGCTTGCTTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAAc                        <  4:177321/144‑1 (MQ=14)
                                                                                                                        cgccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCacc                        >  3:1523439/1‑147 (MQ=255)
                                                                                                                         gccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTCGAAGCGGCTATTGCACGCGCCAAAGCCAGCAAGCTCGACCAGCAACAgg                     >  7:366219/1‑151 (MQ=255)
                                                                                                                           cgTCGCAGCCGCGACTGCCCGACCCACCGCGCCGCAACCGCAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTGGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCt                   <  3:1764150/151‑1 (MQ=14)
                                                                                                                            gTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCCCGCAAGCTCGAACAGCAACAGGCt                   >  4:214117/1‑150 (MQ=255)
                                                                                                                                aaGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCAGCGGCTATTGCACGCGCCCACGCAAGCAAGCGGGAACAGCACCAGGCTAATGc              >  6:1370678/1‑151 (MQ=25)
                                                                                                                                  gCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCCCGCGCCAAAGCAAGCAAGCTGGGACAGCACCAGGCTAATGCgg            >  6:1754617/1‑151 (MQ=255)
                                                                                                                                  gCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCgg            >  7:522770/1‑151 (MQ=255)
                                                                                                                                   ccGCTATTTCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGCACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGt           <  6:665610/151‑1 (MQ=255)
                                                                                                                                    ggCTATCGCCCGAGCCCCACCCCGCAAACTGGAACACCAACAGGCAAATCCGGACGCAGAACCACAGGGTGATCCGCGCAAAGCTGCCGTCGAAGCCGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTa          <  6:793957/150‑1 (MQ=11)
                                                                                                                                     gCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTAc         >  4:240856/1‑151 (MQ=255)
                                                                                                                                      cgagcgCCCGCGCCACAGCGCGATTTCGGCGACCGCCACGGCCTAATCCGGAACCAGACGACCCTGGAGATCCGCGCACTGCTGGCGCGCTAGCCGCTATTGCACGCGCCAAAGCCCGCAAGCTGGAACAGCAACAGGCTAATGCGGTAcc        <  6:365154/146‑1 (MQ=2)
                                                                                                                                      cTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGAAGCGGCTATTGCACGCGCCAACGCACGCACCCAGGCACAGCACCAGGGTAATGCGGTAcc        >  8:323552/1‑151 (MQ=25)
                                                                                                                                       tATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCAGCGGCTATTGCCCGCGCGCAAGCACGCAAGCGGGCCCAGCACCAGGCTGATGCGGTagcc       >  7:958953/1‑148 (MQ=21)
                                                                                                                                       tATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGCAGCGGCTATTGCACGCGCAAAAGCAAGCAAGCAGAAAGAGCAACAGCCTAATgaagtgca        >  2:1725848/1‑143 (MQ=18)
                                                                                                                                        aTTGCCCGTGCCAAAGCGCGCAATCTGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGc                                                        <  6:1183165/101‑1 (MQ=255)
                                                                                                                                        aTTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGCCTAATGCGGAGCCAGAAGCACAGGTTGATCGGCGCAAAGCTGCCGGCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTAcc        <  8:232472/149‑1 (MQ=255)
                                                                                                                                          tGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCaga     >  4:107215/1‑150 (MQ=255)
                                                                                                                                          tGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCAAAAGCACGCAAGCGCGAACAGCAACAGGCAAATGCGGTACCaga     >  7:1722203/1‑150 (MQ=255)
                                                                                                                                           gCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCGAACGCACGCAAGCTCGAACAGCACCAGGCTAATGCGGTGCCaga     >  8:835782/1‑149 (MQ=255)
                                                                                                                                           ccccGAGCCAAAGCCCGCAATCTTGAATAGCACCAGTCTAATGCCGAGCCACAACACCCGGTTGATCGGCGCAAAGCTGCGGGCGAAGCGGATATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCagaag   <  6:519569/150‑1 (MQ=14)
                                                                                                                                            cacGAGCCAAATCGCGCAAACTGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCagaaga  <  1:1811271/149‑1 (MQ=255)
                                                                                                                                             ccGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGAAGCGGCTATTGCACGCGCGAAAGCACGAAACCTCGAACAGCAGCAGGATAATCAGGTACCagacga  >  2:1581721/1‑150 (MQ=25)
                                                                                                                                             ccGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTCGAACAGCAAAAGGCTAATGCGGTCCCagaaga  >  5:1546208/1‑150 (MQ=255)
                                                                                                                                                aGCCAAAGCGCGCAAACGGGAACAGCAACCGTCTAATGCGGAGCCAGAAGAACACCTTGATCCGCGCAAATCTGCAGTCGAAGCGTCTATTGAACTCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCag      <  1:714259/143‑1 (MQ=18)
                                                                                                                                                |                                                                                                                                                  
AGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGA  >  NC_000913/1708757‑1709047

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑