Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 1,708,930 | 0 | C | A | 30.1% | 376.0 / 84.1 | 238 | P671Q (CCG→CAG) | rsxC | SoxR iron‑sulfur cluster reduction factor component; putative membrane‑associated NADH oxidoreductase of electron transport complex |
Reads supporting (aligned to +/- strand): ref base C (131/34); new base A (62/9); total (194/44) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.98e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 242 total aligned reads displayed.
CGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGC > NC_000913/1708781‑1709080 | gTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCCGTGGCAGCCGCTATTGCCCGCGCCAAAGCCCGCAAACGCGCCCAGCAGCAGGCtc > 6:1704148/1‑150 (MQ=14) gTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGCAGCGGCTATTGCCCGAGCAAAAGCCAGCAAACAGGAACAGCAACAgggt > 7:1498053/1‑148 (MQ=14) gCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAAAAGACTAAAGACGAGCCAGAACAACAGGTCGATACGCGAAAAGCCGCAGTCGAAGCCGCTATTGCCCGATCCAAAGCGCGCAAACGGGAACAGCAACCGGCGATTGCgg > 7:525911/1‑151 (MQ=17) cGCTATGCCCGGTGCCACCTCACGCAAGGTGGCAGATCAAGAGCCTAATGCCGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAg < 1:887798/151‑1 (MQ=14) cTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCAGCAGTAGAAGCCGCTATTGCCCGCGCAAAAGCGAAAAAACCCGAACAGCAGCAGGATAAATCGGaac > 7:1163134/1‑148 (MQ=14) tATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAATCCGAAGACCAACCGGATATTGAACAAGCGAAAGCAAGCAATATGGAACAGCAACCGGCGAAtcagtaaaa > 5:1834387/1‑142 (MQ=9) ttGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCCGTCGCAGCCGCTATTGGCGGAGCGAAAGCCCGCCATCGGGAACAGCTAGCGGCTCATGCGGTGcc > 8:468020/1‑148 (MQ=17) gCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTCGAAGCCGCTCTAGCACCAGCCCAAGCCCGCACACTCCCACAGCAAGAGGCGAATGCGGCGCCagaac > 1:1172239/1‑150 (MQ=14) ccGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGAGCAAAAGCGAGAAAACCCGAAAAGTAACAAGATAATCCGTAGCCagaaga > 6:423486/1‑150 (MQ=14) cACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAATATAAGAAGATATTCCACGAGCCAAAGCGCGGAAGCTGTAAGAGAAAACTGCGAATGCGGAGACAGAAGAAAAAGATGATcc > 2:1762869/1‑151 (MQ=9) cAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGAAAAGGGGCACAGCACCAGGCTAATGCGGAGGACGAAGAACAGGTTgctaggcgc > 1:700430/1‑143 (MQ=14) aaGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTGGCCGCGGCTATTGCCCGAGCGAACGCCAGCAAAGCGGACCAGCACCAGGGTAATGAGCCGGCAGAAGAGCACCGTGCTCCgcgc > 6:1798951/1‑150 (MQ=2) ggAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTAGACGCCGCTATTGCCCGCGCCAAAGCCAACAAACCCGCACAGCACCACGCTAAAGCGTAGACAGAAGAAAAGGTTGATCCGAGAAAAGcg > 5:815967/1‑150 (MQ=9) aaCAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTGGAAGCGGCTATTGCCCGAGCCAAGGCCCGCAAACGGGACCAGCACCAGGCTAAAGCCGAGCCAGAAGAACACGTAGATCACCGCACAGCtcc > 1:1642947/1‑149 (MQ=14) aaCAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTCGAAGCGGCTATTGCCCGCGCCAAAGCCCGCAAACGGGCACAGCAGCAGGCTATTGCGGAGCCAGAAGAACTCGGTGCTCCGCGCCAAGCtcc > 3:119667/1‑149 (MQ=14) cAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCCATCCGCGCAAAGCCGCCGTAGAAGCGGCTATTGCCCGAGCGCACGCCACCAAACCGGCACAGCAACAGGCTTAACACGAGCCCGAAGAAGAGGAAGATCCGCCCAAAGATGccc > 1:1522024/1‑150 (MQ=255) aGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGACCAGGTTGATCCGCGCAAAGCTGCCGt > 3:448031/1‑151 (MQ=255) aGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGCGCAAAGGCCAGAAAACGCGAACAGCAAAAGGCTAATGCCGAGGCAGAAGTCCAGGTGGATCAGCCGAAAGCTGCTGt > 8:1068603/1‑151 (MQ=9) ccAACAGGCTAACTCCCATCCAGAACAACAGGTCGATCCTCGAAATTCAGCCTTCGAAGCCGCTATTTCCCGTGCCAAAGCGCGAAAACTCGAACAGCAACCGCCTAATGGGGATTCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTc < 4:660571/150‑1 (MQ=2) cAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCAGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAGCTAGAACAGCAACCCGGGAATGAGGAGAAAGAAGAACAGGATGATCCGCGAAAAGCTGCCggcc > 5:1640624/1‑148 (MQ=14) cAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGCGCAAAAGCCAAAAAACCCGAACAGCAAACATCTAAAGCGCATCCAGAAGAGAAAGATGATACGCGAAAATCtacagt > 2:919430/1‑144 (MQ=255) aGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAACGCCCGCAAACGCGCCCAGCACCCGGCTAATGCGGAGCCAGAAGACCAGGTTGCTCCGCGCAAAGCGGCCGTGGCAGc > 6:147620/1‑151 (MQ=14) tAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCt > 4:82070/1‑151 (MQ=255) acccccGACCCAGAACACCCCGTCGATCCGCGCACACCCGCACGCGACGCCCCTATTGCACGAGCCAACCCTCGCAATCTGTAACCGCAACAGGCTAACGCGGACCCAGAAGAACAGGTCGATCCGCGCTAAGCTGCCGTCGAAGCGGCTa < 1:1107053/147‑1 (MQ=2) aTGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCAGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTAGATCCGAACAAAGAAGACGACGAAAAGGCTAt > 4:1777887/1‑151 (MQ=11) cGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTTGAAGCGGCTATTGc > 5:663850/1‑150 (MQ=255) cGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACCGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGCTCCGCGCAACGCGGCAGTAGCCGCGGCTATTGcc > 5:1134115/1‑150 (MQ=11) gAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAGCGGGAACAGCAACAGGCTAATGCGGAGCGAGAAGAACAGGTTGATCCGCGCAAAGCGGCCGTGGCCGCGGcgggtgcgc > 3:1265769/1‑143 (MQ=11) gAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGACCAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCAc > 6:1180706/1‑151 (MQ=14) gAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGCGCCAAAGCCAGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCGGCCGTGGCCGCGGCTATTgaa > 2:67191/1‑148 (MQ=14) aGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGATGCAGTCGAAGCGGCTATTGCAcg > 5:872240/1‑151 (MQ=255) ccAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAACGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCAGCGCAAAGCTGCCGTCGAAGAGGCTATTGCAcgcg > 8:864336/1‑151 (MQ=255) gaaccagacgTCGATCCCCGCACAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTGGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCa < 1:302169/142‑1 (MQ=17) caacaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGACGCGGCTATTGCACGCGCCaacg > 1:472559/1‑149 (MQ=255) caacaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGACGCGGCTATTGCACGCGCaaacg > 8:566655/1‑149 (MQ=17) acaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCGAAAGCCCGCAAACGGGAACAGCAAACGGATAATCCCCCGGCAGAAGACCAGGTTCATCCGCGAAAAGCGTAGGACGACGGGGCTATTCCACGAGCCAAGGcc > 3:1037095/1‑150 (MQ=9) aGGTCGATCCGCGCAAAGCCGCCGTCGACGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCACCCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTGGACGCGGCTATTGCCCGCGCCACCGCACg > 3:251508/1‑151 (MQ=17) cGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCAGCGCAAAGCTGCCGTGGCCGCGGCTATTGCACGCGCCAAGgcaagcaac > 7:1402533/1‑150 (MQ=17) cGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCTATTGCCCGCGCCACGGCACggagg > 4:466011/1‑147 (MQ=17) cGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCAGCGCAAAGCTGCAGTCGCAGCGGCTATTGCACGCGCCAACGCACGaaac > 6:1035538/1‑150 (MQ=255) gATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGc > 6:618325/1‑151 (MQ=255) ccGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTgg > 8:1324632/1‑151 (MQ=255) ccGCGCAAAGCCGCAGTCGAAGCCGCTATTGCCCGAGCCAAAGCAAGCAATCTGGAACAGCAAAAGGCTAAAGCGGAACCAGAAAAACATGTAGATCCGCGAAAAGCAGCAGTAGACGCAGCTATTACACGAGATAAAGCaacaaagcacg > 7:643770/1‑141 (MQ=255) cgcgCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCCGCGGCTATTGCACGCGCGAAAGCCAGCAAGCTggc > 5:1270063/1‑150 (MQ=255) gcgcAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGAAGCGGCTATTGCACGCGCGAAAGCAAGAAAGcacga > 7:776444/1‑146 (MQ=17) gcAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGAAGCGGCTATTGCCCGCGCAAAAGCACGCAAGCAGGacc > 2:1776692/1‑148 (MQ=255) aaaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAGGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGACGCGGCTATTGCACGCGCGCAAGCCCGCAAGCTGGAACAGc > 5:1195496/1‑151 (MQ=255) aaaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGACGCGGCTATTGCACGCGCGAACGCCCGCAAGCTGGACCAGc > 2:200397/1‑151 (MQ=255) aaaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGc > 8:1624000/1‑151 (MQ=255) aaaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGACGCGGCTATTGCACGCGCGAAAGCACGAAAGCACGAACAGc > 2:1146/1‑151 (MQ=17) aaaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCTATTGCACGCGCGAAAGCAAGCAACCTCGAACAGc > 2:1266950/1‑151 (MQ=17) aaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTCGAACacc > 1:363736/1‑148 (MQ=255) cccgcccccccaGCCGCGACCGCCCCCGCCCAAGCGCGCAAGCGGGAACAGCAACATTCTAATGCGGAGCCAGAAGAACACGTGGATCCGCGCACAGCCTCCGTCGAAGCGGCTATTTCACGCGACAAAGCCCGCAAGCTGGAACAGCAAc < 8:638588/140‑1 (MQ=255) ccccccttCGAAGCCGCTATTGCCCGATTAAAATCTCGCAATCGGTAACAGCAAAAGTCTAATTCGGAGCCATAAGAACAGGTTGATCAGCGCAAAGCTTGCTTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAAc < 4:177321/144‑1 (MQ=14) ccgccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTg < 1:1285061/99‑1 (MQ=255) cgccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCacc > 3:1523439/1‑147 (MQ=255) gccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGACCAGCAACAgg > 3:529599/1‑151 (MQ=255) gccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTCGAAGCGGCTATTGCACGCGCCAAAGCCAGCAAGCTCGACCAGCAACAgg > 7:366219/1‑151 (MQ=255) cgTCGCAGCCGCGACTGCCCGACCCACCGCGCCGCAACCGCAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTGGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCt < 3:1764150/151‑1 (MQ=14) gTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTGGAAGCGGCTATTCGAAGGGCACACGCCCGCAAGCAGGACCAGTCACAgc > 6:1578836/1‑147 (MQ=11) gTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCAAAAGCACGCAACCACGAACAGCAGCAggat > 4:578221/1‑148 (MQ=17) tCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGACGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGACCAGCAACAGGCTa > 8:1477358/1‑150 (MQ=255) cGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGAAGCGGCTATTGCACGCGCCCAAGCACGCAACCTCGAACAGCACCAGGCTaa > 2:1037168/1‑150 (MQ=255) gAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAgg < 6:955452/73‑1 (MQ=255) gAAGCCGCTATTGCCCGAGCCAAAGCGCCCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCTATTGCACGCGCAAAAGCACGCAAGCTCGCACAGCACCAGGATAAtc > 4:1827758/1‑150 (MQ=21) aaGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCAGCGGCTATTGCACGCGCCCACGCAAGCAAGCGGGAACAGCACCAGGCTAATGc > 6:1370678/1‑151 (MQ=25) aaGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCCAAGCACGCAAGCTGGAACAGCAACAGGCTAATGc > 8:1716928/1‑151 (MQ=255) aGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCg > 4:1518178/1‑151 (MQ=255) aGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCAAAAGCACGCAAGCTCGAACAGCAACAGGCTAAtccc > 5:1390682/1‑148 (MQ=255) gCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCCCGCGCCAAAGCAAGCAAGCTGGGACAGCACCAGGCTAATGCgg > 6:1754617/1‑151 (MQ=255) ccGCTATTTCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGCACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGt < 6:665610/151‑1 (MQ=255) ccGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTCGAAGCGGCTATTGCACGCGCAAAAGCAAACAAACACGAACAGCAACACGATaaaaacg > 7:242497/1‑145 (MQ=21) ggCTATCGCCCGAGCCCCACCCCGCAAACTGGAACACCAACAGGCAAATCCGGACGCAGAACCACAGGGTGATCCGCGCAAAGCTGCCGTCGAAGCCGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTa < 6:793957/150‑1 (MQ=11) gCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTAc > 4:240856/1‑151 (MQ=255) cTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGAAGCGGCTATTGCACGCGCCAACGCACGCACCCAGGCACAGCACCAGGGTAATGCGGTAcc > 8:323552/1‑151 (MQ=25) tATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCAGCGGCTATTGCCCGCGCGCAAGCACGCAAGCGGGCCCAGCACCAGGCTGATGCGGTagcc > 7:958953/1‑148 (MQ=21) tATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCAGCGGCTATGGCGCGCGCCAAAGCGCGCAAGCTCGAACAGCCGCAGGCTATTGGGGTagg > 6:1202489/1‑148 (MQ=21) tATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGCAGCGGCTATTGCACGCGCAAAAGCAAGCAAGCAGAAAGAGCAACAGCCTAATgaagtgca > 2:1725848/1‑143 (MQ=18) tGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCaga > 4:107215/1‑150 (MQ=255) tGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCAAAAGCACGCAAGCGCGAACAGCAACAGGCAAATGCGGTACCaga > 7:1722203/1‑150 (MQ=255) gCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCGAACGCACGCAAGCTCGAACAGCACCAGGCTAATGCGGTGCCaga > 8:835782/1‑149 (MQ=255) ccccGAGCCAAAGCCCGCAATCTTGAATAGCACCAGTCTAATGCCGAGCCACAACACCCGGTTGATCGGCGCAAAGCTGCGGGCGAAGCGGATATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCagaag < 6:519569/150‑1 (MQ=14) cacGAGCCAAATCGCGCAAACTGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCagaaga < 1:1811271/149‑1 (MQ=255) ccGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGAAGCGGCTATTGCACGCGCGAAAGCACGAAACCTCGAACAGCAGCAGGATAATCAGGTACCagacga > 2:1581721/1‑150 (MQ=25) ccGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTCGAACAGCAAAAGGCTAATGCGGTCCCagaaga > 5:1546208/1‑150 (MQ=255) aGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAACAACAGATAGATACGAGAAAAGCTGCAGTCGAAGCGGATATTGAACTCTCCAAAGCACGCAAGATGGAAAAGAAAAAGGCTAATGCGGTACCag > 2:716531/1‑143 (MQ=17) cccaccgcccAACCGGGAACAGCAACCGGCTAATGCGGATCCATAACCACAGCGAGATCCGCGCAAAGATTCCGTCGAACCGGCTATTGAACGCGCCAAAGCTCGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGtt < 8:292417/146‑1 (MQ=14) cAAAGCGCGCAAACGGGAACAGCAACCCGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACCCAAGCTCGAACACCAACAGGCTAATGCGGTACCAGAACAACAGGtt > 3:1561386/1‑151 (MQ=255) aaaGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTCGAACAGCAACAGGCTCATCCGGTACCAGAAGAACAGGt > 5:161187/1‑149 (MQ=255) aaaGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAACCACGAACAGCAACACGCTACAGCGGAAACAGAAGAAAAGGttt > 5:1115707/1‑150 (MQ=25) aaCGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGCTTGATCCGCGCAAAGCTGCCCTCGAAGAGGCTATTCCACGCGCCAAAGCACGAAAGCTCGAACAGCAAAAGGATAATAAGGAACAAGAAGAACATGTAGATcataaaa > 4:1295489/1‑144 (MQ=255) cGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCGAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCaa > 6:1442399/1‑149 (MQ=255) aagaGCAACCGGCTACTGCGTAGCCAGAAGAACCGGTGGCTGCCCTCAACTCGGCCGGCGAAGCGTCTTTTGCCCGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGc < 6:1582690/148‑1 (MQ=17) ccAGCAACCGGCTAACGCCGAGCCAGAAGACCCCGGTGATCCGCGCAAAGCGGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGGTGATCCGCGCAAAGCGGCa < 6:306984/150‑1 (MQ=17) aCAGCAACCGGCTAATGCCCCCCCAGCACACCAGGGGCATCCGCGAAACGCGCCCGTCGATGAGGCTATTGCTCTCGCCATATCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCa < 1:1756311/151‑1 (MQ=9) cAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGc > 3:606200/1‑149 (MQ=255) cAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATCCGGAACAAGAAGAACACGTTGATCCGCCAAAAGCCGCat > 5:429411/1‑150 (MQ=17) aGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCCCAAAGCGGCAGt > 3:163103/1‑151 (MQ=255) gCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCACAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACAAGAAGAACAGGTTGATACGCGCACAGCGGCTGtt > 4:230130/1‑151 (MQ=18) ccGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTCGAAGCGGCTATTGCACGCGCCAAAGCACGAAAGCAGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTAGAACCGCGCAAAGCGGCAGTTcccc > 7:1830470/1‑150 (MQ=18) | CGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGC > NC_000913/1708781‑1709080 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |